Miyakogusa Predicted Gene
- Lj1g3v4578920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4578920.1 Non Chatacterized Hit- tr|I1NA46|I1NA46_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25349 PE,79.74,0,no
description,Tetratricopeptide-like helical; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; PPR_,CUFF.32707.1
(772 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 829 0.0
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 144 3e-34
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 2e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 3e-31
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 134 4e-31
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 8e-31
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 130 3e-30
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 124 2e-28
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 5e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 5e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 6e-28
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 6e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 6e-28
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 119 8e-27
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 9e-27
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 9e-27
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 117 2e-26
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 115 9e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 114 3e-25
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 6e-25
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 5e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 8e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 5e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 7e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 8e-23
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 105 1e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 104 2e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 3e-22
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 104 3e-22
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-22
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 103 6e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 100 4e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 100 6e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 100 6e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 2e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-20
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-20
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 97 6e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 96 7e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 8e-19
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 92 1e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 92 1e-18
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 89 2e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-17
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-17
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 87 3e-17
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 5e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 84 5e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 9e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 9e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 7e-15
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 79 1e-14
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 77 3e-14
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 75 2e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 3e-13
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-13
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 73 7e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-13
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 4e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 71 4e-12
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 69 1e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 69 2e-11
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 66 8e-11
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-10
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 64 4e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 64 4e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 5e-10
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 63 8e-10
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 9e-10
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 63 1e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 61 4e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 61 4e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-09
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 60 6e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 6e-09
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 60 7e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 60 7e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 59 1e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 59 2e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 55 2e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 2e-07
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 55 3e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 54 3e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 54 4e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 54 4e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 54 5e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 6e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 54 6e-07
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 53 8e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 53 1e-06
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 52 2e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 50 6e-06
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-06
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/723 (56%), Positives = 528/723 (73%), Gaps = 20/723 (2%)
Query: 70 SPNHYARVASKLAQD-----IEMVLQEDPVDSGVNV---------ELLAKLVVLGIRGRN 115
S +YA ASKLA+D + ++ + +SG NV +LL+K + +R
Sbjct: 80 SLEYYADFASKLAEDGRIEDVALIAETLAAESGANVARFASMVDYDLLSKGISSNLRQGK 139
Query: 116 VWTVIDTLKKVQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARFQLPI 175
+ +V+ TLK+++ + I+ ++ S++ ++ + R M S + +A++LME+LA I
Sbjct: 140 IESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMANSVQVEKAIDLMEILAGLGFKI 199
Query: 176 RELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALK 235
+ELV P D++K CV NP+LA+RYA LLPH +L C II FGK+ D++S + AY+A K
Sbjct: 200 KELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFGKKGDMVSVMTAYEACK 259
Query: 236 KHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYT 295
+ LD PNMYI R +ID CGLCGD++KSRYIYEDLL + I PNIYV NSLMNVNS DL YT
Sbjct: 260 QILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNVNSHDLGYT 319
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L +Y+ MQ L + DMTSYNILLK CC+AGRVDLAQD+YKE K +ES G LKLD FTY T
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT 379
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
IIKVFADAK+W+ ALKVK DM+S GV NT WSSLI+ACA+AGLVEQA LFEEML +G
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASG 439
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF------GEGYNSNLKQGSIH 469
CEPN+QCFNI+LHACVEACQYDRAFR F SWKG+ + S +G S+ +
Sbjct: 440 CEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN 499
Query: 470 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQ 529
++ N SNS + ++RF F PTT+TYN LLKACG+DYY K L++EMK++GLSPNQ
Sbjct: 500 GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQ 559
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
ITWS LID+CGG+ +VEGA+ IL++M AG +PDV+AYTTAIK+C E+K K A +L+EE
Sbjct: 560 ITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEE 619
Query: 590 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
M+ +I PNWVTYNTLLKARSKYGS+LEV+QCLAIYQDM+ AGYKPND++L+ELIEEWCE
Sbjct: 620 MRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Query: 650 GVIQDNREYQAEFSSIKKSELERPQSLLLEKIAAHLLKRVADILAIDVQGLTKVEARLVI 709
GVIQ+N + Q + S + RP SLL+EK+A H+ +R A LAID+QGLTK+EARLV+
Sbjct: 680 GVIQENGQSQDKISDQEGDNAGRPVSLLIEKVATHMQERTAGNLAIDLQGLTKIEARLVV 739
Query: 710 LAVLRMIKENYAFGHSVNDDILIIIGATKADGSPAKELLEVQGTIIKLLRNELGLEVLPA 769
LAVLRMIKE+Y G V DD+LIIIG +A+ K+ + VQ ++KLLR+EL L VLPA
Sbjct: 740 LAVLRMIKEDYMRGDVVIDDVLIIIGTDEANTVSGKQEITVQEALVKLLRDELSLVVLPA 799
Query: 770 RTR 772
R
Sbjct: 800 GQR 802
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 224/481 (46%), Gaps = 41/481 (8%)
Query: 205 PHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
P+ HI + +IS G+ L LE +D + +++ Y A+I+A G G + S
Sbjct: 139 PNEHI-YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSR---DLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+ + + N+KI+P+I +N+++N +R D L ++ M++ G++PD+ +YN LL AC
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
+ G D A+ +++ + G + D+ TYS +++ F + + + +M S G
Sbjct: 258 AIRGLGDEAEMVFRTMND----GGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
+ +++ L+ A A +G +++A+ +F +M AGC PN ++++L+ ++ +YD +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 442 FFHSWKG----------NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 491
F K N ++ FGEG G T+ + I
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEG-------GYFKEVVTLFHDMVEENI-------- 418
Query: 492 FTPTTSTYNTLLKACGSDYYH--AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
P TY ++ ACG H A+ ++ M + P+ ++ +I+ G E A+
Sbjct: 419 -EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
+M + G P + + + + K++ + + I N T+N ++A
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKKSE 669
+ G + ++ + Y DM+K+ P++ LE ++ + + D E + +F +K S+
Sbjct: 538 KQGG---KFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVD--ECREQFEEMKASD 592
Query: 670 L 670
+
Sbjct: 593 I 593
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 50/331 (15%)
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
AGR D + + + K+++ K + Y+ +I + L L+V +M S GV+
Sbjct: 116 AGRGDWQRSL-RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+ ++++LINA G E +++L + M P+ +N +++AC R
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA---------RGG 225
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
W+G +LG F E + ++ P TYNTLL
Sbjct: 226 LDWEG--LLGLFAEMRHEGIQ-----------------------------PDIVTYNTLL 254
Query: 504 KACG----SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
AC D A+ + M G+ P+ T+S L++ G +E ++L M G
Sbjct: 255 SACAIRGLGD--EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 619
PD+ +Y ++ +S + K+A+ ++ +M++ PN TY+ LL + G +V+
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 620 QCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
Q ++ +M+ + P+ LIE + EG
Sbjct: 373 Q---LFLEMKSSNTDPDAATYNILIEVFGEG 400
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 147/348 (42%), Gaps = 37/348 (10%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNI 298
P++ Y +++ G K + ++ + P+I +N L+ S + + +
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ MQ G P+ +Y++LL +GR D + ++ E+K + D TY+ +I+
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT----DPDAATYNILIE 395
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
VF + ++ + + HDM + + + +I AC GL E A ++ + M P
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Query: 419 NTQCFNIILHACVEACQYDRA---FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT-- 473
+++ + ++ A +A Y+ A F H N + +F S + G + +
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 474 ---VPNGFS------NSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKALIN----- 518
V +G N+QI ++ + F TY + K+ C D +A+++
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 519 -----------EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
EMK + P+ + + +++ + G TE + E+L+ M
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 105/226 (46%), Gaps = 9/226 (3%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
+ E G +++++ +D ++++++ P+M Y II ACG G +R I + +
Sbjct: 396 VFGEGGYFKEVVTLF--HDMVEENIE-PDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 274 ITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
I P+ + ++ + Y L + M +G P + +++ LL + G V ++
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
+ L L G + + T++ I+ + ++ A+K DM + + + ++
Sbjct: 513 AI---LSRLVDSG-IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAV 568
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
++ + A LV++ + FEEM + P+ C+ ++L + ++D
Sbjct: 569 LSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 614
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 205/459 (44%), Gaps = 60/459 (13%)
Query: 220 KRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC-GDFMK-SRYIYEDLLNQKITPN 277
K D+ LE ++ +K P+++IY +ID GLC G M + +++++L +++ P+
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLID--GLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 278 IYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK 335
+ +N+L++ + + + + + M+ ++P + ++N LLK AG V+ A+++ K
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 336 ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINAC 395
E+K L V D FT+S + ++ + + AL V +GV +N S L+NA
Sbjct: 309 EMKDLGFVP----DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF 455
G +E+A ++ + G PN +N ++ A + + M
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 456 GEGYNSNLKQ----GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY 511
YN +++ G + NA N + +P+ TYN L+ G Y
Sbjct: 425 -LAYNCLIRRFCELGEMENAEKEVNKMKLKGV---------SPSVETYNILIGGYGRKYE 474
Query: 512 HAKA--LINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
K ++ EM+ G PN +++ LI+ +C G++ +E I + + M D G+ P V Y
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSPKVRIYN 533
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE----------- 617
I C + A +EM I N VTYNTL+ S G + E
Sbjct: 534 MLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK 593
Query: 618 ---------------------VQQCLAIYQDMQKAGYKP 635
VQ+C+A+Y++M+++G KP
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 175/413 (42%), Gaps = 40/413 (9%)
Query: 265 IYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
++ ++L P+ +++ + V D+ L ++ M++ + P + YN+L+ C
Sbjct: 166 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC 225
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
R++ A+ ++ E+ RL + TY+T+I + A + + KV+ M++ +
Sbjct: 226 KGKRMNDAEQLFDEM----LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE 281
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ + +++L+ AG+VE A + +EM G P+ F+I+ + + A
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 443 FHSW--KGNKMLGSFGEGY------NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 494
+ + G KM Y N+ K+G I A +IL P
Sbjct: 342 YETAVDSGVKM-----NAYTCSILLNALCKEGKIEKA---------EEILGREMAKGLVP 387
Query: 495 TTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSILI-DIC--GGTENVEGAI 549
YNT++ C D A+ I M+ G+ P+ + ++ LI C G EN E +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
+K G+ P V Y I F + + +EM+ PN V+Y TL+
Sbjct: 448 NKMKL---KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC-EGVIQDNREYQAE 661
K +LE Q + +DM+ G P LI+ C +G I+D + E
Sbjct: 505 CKGSKLLEAQ---IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVN--SRDLTYTLNIY 299
N+ Y +ID + G ++ + ++ + + P+++ +NSL++ + ++ + +Y
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+ M+ G+KP + +Y++L+ C G ++L + ++ E+ LK D+ Y+ ++
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS-------LKPDLLVYNGVLHC 674
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
+A + A ++ M + L+ ++SLI G + + L +EM EP
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWK----------GNKMLGSFGEGYNS 461
+NII+ E Y A+ ++ + GN+++ E + S
Sbjct: 735 ADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 34/320 (10%)
Query: 346 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 405
L+ D +++ ++F+ L +LK HD + + S L+N + ++ +A
Sbjct: 82 LRSDSTPFASPKELFSAFSLSSPSLK--HD-------FSYLLLSVLLN---ESKMISEAA 129
Query: 406 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF-----HSWKGNKMLGSFGEGYN 460
LF + G P++ ++L V+ Q+ F ++ +K + +G+
Sbjct: 130 DLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM--YGKAIQ 187
Query: 461 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALIN 518
+ +K + + N + +I P+ YN L+ G A+ L +
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIY---------PSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 519 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
EM L P+ IT++ LID N E + ++ + M I+P +I + T +K ++
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
+ A + +EMK P+ T++ L Y S + + L +Y+ +G K N Y
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDG---YSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 639 YLEELIEEWC-EGVIQDNRE 657
L+ C EG I+ E
Sbjct: 356 TCSILLNALCKEGKIEKAEE 375
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 208/452 (46%), Gaps = 31/452 (6%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ + ++IS + + L A+E + + + P+++ Y ++ G + I+E+
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 269 LLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ N PNI FN+ + + N T + I+ + GL PD+ ++N LL G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
++KE+K V + T++T+I ++ ++ A+ V M AGV +
Sbjct: 470 DSEVSGVFKEMKRAGFVPERE----TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++++ A A G+ EQ+ ++ EM C+PN + +LHA + +
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA-------------YANG 572
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF-------PFTPTTSTY 499
K ++ S E S + + T+ S +L ER F+P +T
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 500 NTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD 557
N+++ G AKA +++ MK G +P+ T++ L+ + + + + EIL+ +
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 558 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
GIKPD+I+Y T I + + A ++ EM++ I P+ +TYNT + + Y +
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS---YAADSM 749
Query: 618 VQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
++ + + + M K G +PN +++ +C+
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 204/456 (44%), Gaps = 55/456 (12%)
Query: 200 YASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDF 259
Y S+L ++ + IIS GK + SA ++ L++ ++Y Y ++I A G +
Sbjct: 167 YQSMLDNSVVAI--IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRY 224
Query: 260 MKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLT---YTLNIYQIMQNLGLKPDMTSYNI 316
++ +++ + P + +N ++NV + T ++ + M++ G+ PD +YN
Sbjct: 225 REAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNT 284
Query: 317 LLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM 376
L+ CC G L Q+ + + +++ G D TY+ ++ V+ + + A+KV ++M
Sbjct: 285 LI-TCCKRG--SLHQEAAQVFEEMKAAG-FSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
G + + V ++SLI+A A G++++A++L +M G +P+ + +L A +
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 437 DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTT 496
+ A F + NA PN
Sbjct: 401 ESAMSIFEE----------------------MRNAGCKPN-------------------I 419
Query: 497 STYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 554
T+N +K G+ + + +E+ GLSP+ +TW+ L+ + G + K
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 555 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
M AG P+ + T I +F+QA+T+Y M + P+ TYNT+L A ++ G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 615 VLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
+ ++ LA +M+ KPN+ L+ + G
Sbjct: 540 WEQSEKVLA---EMEDGRCKPNELTYCSLLHAYANG 572
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 169/364 (46%), Gaps = 33/364 (9%)
Query: 286 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNIL--LKACCVAGRVDLAQ---DMYKELKHL 340
N +S L L+ ++ + KP+ TS +L LK + DLA D + + K
Sbjct: 110 NFDSGQLDSVLS--ELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDY 167
Query: 341 ESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL 400
+S+ LD + II + A + + ++ G +L+ +++SLI+A A++G
Sbjct: 168 QSM----LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGR 223
Query: 401 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVE-ACQYDRAFRFFHSWKGNKMLGSFGEGY 459
+A+ +F++M GC+P +N+IL+ + +++ K + G + Y
Sbjct: 224 YREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD---GIAPDAY 280
Query: 460 NSNL-----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK 514
N K+GS+H +Q+ + F+ TYN LL G + +
Sbjct: 281 TYNTLITCCKRGSLHQEA--------AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 515 AL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 572
A+ +NEM G SP+ +T++ LI ++ A+E+ M + G KPDV YTT +
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 573 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
+ + A++++EEM++ PN T+N +K YG+ + + + I+ ++ G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM---YGNRGKFTEMMKIFDEINVCG 449
Query: 633 YKPN 636
P+
Sbjct: 450 LSPD 453
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 113/241 (46%), Gaps = 14/241 (5%)
Query: 208 HILFCNIISEF--GKRRDLISAL--EAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
+ +C+++ + GK L+ +L E Y + + P + + ++ C C ++
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE----PRAVLLKTLVLVCSKCDLLPEAE 614
Query: 264 YIYEDLLNQKITPNIYVFNSLMNV-NSRDLTYTLN-IYQIMQNLGLKPDMTSYNILLKAC 321
+ +L + +P+I NS++++ R + N + M+ G P M +YN L+
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
+ ++++ +E+ +K D+ +Y+T+I + + A ++ +MR++G+
Sbjct: 675 SRSADFGKSEEILREIL----AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
+ + +++ I + A + E+AI + M+ GC PN +N I+ + + D A
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790
Query: 442 F 442
F
Sbjct: 791 F 791
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 224 LISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNS 283
L A A+ LK+ P++ +++ G K+ + + + + TP++ +NS
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 284 LMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
LM ++SR D + I + + G+KPD+ SYN ++ A C R+ A ++ E+++
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
V DV TY+T I +A +++ A+ V M G N ++S+++
Sbjct: 730 IVP----DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Query: 402 EQAIQLFEEM 411
++A E++
Sbjct: 786 DEAKLFVEDL 795
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 50/366 (13%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG-DFMKSRYIYEDL 269
F +IS +G+ A+ ++++K++ PN+ Y A+IDACG G +F + ++++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 270 LNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRV 327
+ P+ FNSL+ V SR + N++ M N ++ D+ SYN LL A C G++
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 328 DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA 387
DLA ++ ++ V R+ +V +YST+I FA A + AL + +MR G+ L+ V+
Sbjct: 391 DLAFEILAQMP----VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 447
+++L++ G E+A+ + EM G + + +N +L + +YD + F K
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 448 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC- 506
+L P TY+TL+
Sbjct: 507 REHVL-----------------------------------------PNLLTYSTLIDGYS 525
Query: 507 -GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 565
G Y A + E K+ GL + + +S LID V A+ ++ M GI P+V+
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV 585
Query: 566 AYTTAI 571
Y + I
Sbjct: 586 TYNSII 591
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 146/303 (48%), Gaps = 12/303 (3%)
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL-VEQAIQLF 408
V+ +S +I + + L + A+ V + M+ G+ N V ++++I+AC G+ +Q + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
+EM G +P+ FN +L C ++ A F N+ + YN+ L +I
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSYNTLLD--AI 384
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLS 526
+ F +IL+ P +Y+T++ A + A L EM+ +G++
Sbjct: 385 CKGGQMDLAF---EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
++++++ L+ I E A++IL+ M GIK DV+ Y + + + + +
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
+ EMK + PN +TY+TL+ SK G ++ + I+++ + AG + + LI+
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGL---YKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 647 WCE 649
C+
Sbjct: 559 LCK 561
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 158/353 (44%), Gaps = 59/353 (16%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNI 298
PN+ Y +ID G F ++ ++ ++ I + +N+L+++ ++ L+I
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M ++G+K D+ +YN LL G+ D + ++ E+K + L TYST+I
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL----LTYSTLID 522
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
++ L++ A+++ + +SAG+ + V +S+LI+A GLV A+ L +EM G P
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
N +N I+ A + DR+ + N ++P F
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADY--------------------------SNGGSLP--F 614
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDI 538
S+S + + TE + N +++ G L E S N+ T D
Sbjct: 615 SSSALSALTE--------TEGNRVIQLFGQ-------LTTE------SNNRTT----KDC 649
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
G + + +E+ + M IKP+V+ ++ + C +F+ A L EE++
Sbjct: 650 EEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 18/254 (7%)
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
S++I+ G V A ++FE G F+ ++ A + ++ A F+S K
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK- 295
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF---TERFPFTPTTSTYNTLLKA 505
G NL + G Q+ F +R P T+N+LL
Sbjct: 296 -------EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAV 348
Query: 506 C--GSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKP 562
C G + A+ L +EM + + +++ L+D IC G + ++ A EIL M I P
Sbjct: 349 CSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ-MDLAFEILAQMPVKRIMP 407
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 622
+V++Y+T I ++ F +AL L+ EM+ I + V+YNTLL +K G ++ L
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG---RSEEAL 464
Query: 623 AIYQDMQKAGYKPN 636
I ++M G K +
Sbjct: 465 DILREMASVGIKKD 478
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 221/489 (45%), Gaps = 37/489 (7%)
Query: 150 RRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKR-CVLSRNPKLA-----VRYASL 203
R+MV +G + E + +E + + + +++ + +I+ C L + K A + +
Sbjct: 110 RQMVRTGELEEGFKFLENMV-YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
+P I + +IS + K ++ +AL D + P++ Y I+ + G ++
Sbjct: 169 VPDV-ITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAM 224
Query: 264 YIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+ + +L + P++ + L+ RD + + + + M++ G PD+ +YN+L+
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C GR+D A K L + S G + +V T++ I++ W A K+ DM G
Sbjct: 285 CKEGRLDEA---IKFLNDMPSSG-CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
+ + V ++ LIN GL+ +AI + E+M GC+PN+ +N +LH + + DRA
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 442 FFHSWKGNKMLGSFGE--GYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPT 495
+ G + + YN+ L K G + +A + N S+ +P
Sbjct: 401 YLERMVSR---GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC---------SPV 448
Query: 496 TSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 553
TYNT++ KA L++EM+ L P+ IT+S L+ V+ AI+
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
GI+P+ + + + + +S+ +A+ M + PN +Y L++ + G
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 614 SVLEVQQCL 622
E + L
Sbjct: 569 MAKEALELL 577
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 183/403 (45%), Gaps = 24/403 (5%)
Query: 254 GLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDM 311
G C G K+ I E L P++ +N +++ + N ++ + + PD+
Sbjct: 146 GFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN-NALSVLDRMSVSPDV 204
Query: 312 TSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALK 371
+YN +L++ C +G++ A ++ + + DV TY+ +I+ A+K
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP----DVITYTILIEATCRDSGVGHAMK 260
Query: 372 VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 431
+ +MR G + V ++ L+N G +++AI+ +M +GC+PN NIIL +
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 432 EACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
++ A + KG + + +F N ++G + A IL
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI---------DILEKMP 371
Query: 489 RFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVE 546
+ P + +YN LL + +A+ + M + G P+ +T++ ++ VE
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
A+EIL + G P +I Y T I ++ +A+ L +EM++ ++ P+ +TY++L+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
S+ G +V + + + + ++ G +PN ++ C+
Sbjct: 492 GGLSREG---KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 143/337 (42%), Gaps = 49/337 (14%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNI 298
PN+ + I+ + G +M + + D+L + +P++ FN L+N R L ++I
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M G +P+ SYN LL C ++D A + L+ + S G D+ TY+T++
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY---LERMVSRGCYP-DIVTYNTMLT 422
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
+ A+++ + + S G + + ++++I+ A AG +AI+L +EM +P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+T ++ ++ + D A +FFH +
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEF-------------------------------- 510
Query: 479 SNSQILSFTERFPFTPTTSTYNT-LLKACGSDYY-HAKALINEMKTVGLSPNQITWSILI 536
ER P T+N+ +L C S A + M G PN+ +++ILI
Sbjct: 511 ---------ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 573
+ + A+E+L + + G+ A A K+
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM 598
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 194/408 (47%), Gaps = 32/408 (7%)
Query: 241 PNMYIYRAIIDACGLCG-DFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLN 297
P + Y A++DA + + +++++L +++PN++ +N L+ + ++ L
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++ M+ G P++ +YN L+ C ++D D +K L+ + G L+ ++ +Y+ +I
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKID---DGFKLLRSMALKG-LEPNLISYNVVI 282
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ V +M G +L+ V +++LI G QA+ + EML G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
P+ + ++H+ +A +RA F + G N + TT+ +G
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRV--------RGLCPNER-----TYTTLVDG 389
Query: 478 FSNSQILSFTERF-------PFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPN 528
FS ++ R F+P+ TYN L+ A A++ +MK GLSP+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 529 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 588
+++S ++ + +V+ A+ + + M + GIKPD I Y++ I+ E + K+A LYE
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 589 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
EM + P+ TY L+ A G ++++ L ++ +M + G P+
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEG---DLEKALQLHNEMVEKGVLPD 554
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 197/455 (43%), Gaps = 33/455 (7%)
Query: 221 RRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYV 280
+R++ A + + + PN++ Y +I G+ + +++ + + PN+
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 281 FNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK 338
+N+L++ R + + + M GL+P++ SYN+++ C GR+ + E+
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 339 HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
LD TY+T+IK + + AL + +M G+ + + ++SLI++ A
Sbjct: 303 R----RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 399 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---F 455
G + +A++ ++M + G PN + + ++ + + A+R N S +
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 456 GEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHA 513
N + G + +A V L + +P +Y+T+L C S D A
Sbjct: 419 NALINGHCVTGKMEDAIAV---------LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 514 KALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 573
+ EM G+ P+ IT+S LI + A ++ + M G+ PD YT I
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 574 CVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL--AIYQDMQKA 631
+ ++AL L+ EM + P+ VTY+ L+ +K E ++ L Y++
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-- 587
Query: 632 GYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIK 666
P+D LIE N E+++ S IK
Sbjct: 588 ---PSDVTYHTLIENC------SNIEFKSVVSLIK 613
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 201/485 (41%), Gaps = 73/485 (15%)
Query: 144 VIAAECRRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASL 203
VI CR G + E ++ + R + E+ + + C + V +A +
Sbjct: 281 VINGLCRE----GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 204 LPH----AHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDF 259
L H + I + ++I K ++ A+E D ++ PN Y ++D G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 260 MKSRYIYEDLLNQKITPNIYVFNSLMNVN--SRDLTYTLNIYQIMQNLGLKPDMTSYNIL 317
++ + ++ + +P++ +N+L+N + + + + + + M+ GL PD+ SY+ +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 318 LKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
L C + VD A + +E+ +K D TYS++I+ F + + + A + +M
Sbjct: 457 LSGFCRSYDVDEALRVKREMVE----KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 378 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
G+ + +++LINA G +E+A+QL EM+ G P+ ++++++ + +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 438 RAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTS 497
A R +L F E P+
Sbjct: 573 EAKRL--------LLKLFYE---------------------------------ESVPSDV 591
Query: 498 TYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD 557
TY+TL++ C + E K+V S++ C E A ++ +SM
Sbjct: 592 TYHTLIENCSNI---------EFKSV--------VSLIKGFCMKGMMTE-ADQVFESMLG 633
Query: 558 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
KPD AY I + + ++A TLY+EM + VT L+KA K G V E
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 618 VQQCL 622
+ +
Sbjct: 694 LNSVI 698
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 163/350 (46%), Gaps = 36/350 (10%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P+ +YN L+ C AG+++ A+++ +K E +K +V T +TI+ M
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNM 459
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
A+ DM GV N V + +LI+AC VE+A+ +E+ML AGC P+ + + ++
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 429 ACVEACQYDRAFRFFHSWKG----------NKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ + A R K N ++G F + +NA V
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK----------NNAEKV---- 565
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILI 536
++L+ E+ P + TYNTL+ G D+ + ++ +M+ GL P T+ +I
Sbjct: 566 --YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 537 DICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
D ++ A+++ K MG + + P+ + Y I + NF QAL+L EEMK +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
PN TYN L K ++ + + L + +M + +PN +E L+E
Sbjct: 684 RPNVETYNALFKCLNEKT---QGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 167/379 (44%), Gaps = 32/379 (8%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
I DL+ K FN+L++ R D++ ++ M + ++PD+ + IL+ C
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 323 VAGRVDLAQDMYKEL--KHLESVGRLKLDVFTYSTII----KVFADAKLWQMALKVKHDM 376
+ RVD A ++++++ K + +K D ++T+I KV + ++ +++K +
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
R N V ++ LI+ AG +E A ++ M +PN N I+
Sbjct: 401 RCVP---NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 437 DRAFRFFHSWKGNKMLGSFGEGYNSNL--KQGSIHNATTVPNGFSNSQILSFTERF---P 491
+ A FF + EG N+ IH +V N + + + E+
Sbjct: 458 NMAVVFFMDMEK--------EGVKGNVVTYMTLIHACCSVSNV---EKAMYWYEKMLEAG 506
Query: 492 FTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
+P Y L+ C H A ++ ++K G S + + +++LI + N E
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
E+L M G KPD I Y T I + K+F+ + E+M+ + P TY ++ A
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA- 625
Query: 610 SKYGSVLEVQQCLAIYQDM 628
Y SV E+ + L +++DM
Sbjct: 626 --YCSVGELDEALKLFKDM 642
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 217/519 (41%), Gaps = 91/519 (17%)
Query: 59 WNISRTL---DSPLSPNHYARVASKLAQDIEMVLQEDPVDSGVNVELLAKLVVLGI---- 111
W+I L +PL + + S L +++++ D V V++ +V LGI
Sbjct: 279 WDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINT 338
Query: 112 --RGRNVWTVIDTLKKVQGLEISLSAHLNASAM---DVIAAECRRMVMSGHIAEAVELME 166
+ R V ++ ++++G + A ++ +I C+ G + EA EL+
Sbjct: 339 LCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK----VGRLKEAEELL- 393
Query: 167 VLARFQLPIRELVQPSDMIKRCVLS---RNPKLA--------VRYASLLPHAHILFCNII 215
++ + E P+ + C++ R KL ++ + P+ + I+
Sbjct: 394 ----VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV-VTVNTIV 448
Query: 216 SEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKIT 275
+ L A+ + ++K N+ Y +I AC + K+ Y YE +L +
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
P+ ++ +L++ R + + + ++ G D+ +YN+L+ C A+ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---AEKV 565
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
Y+ L +E G+ K D TY+T+I F K ++ ++ MR G++ + ++I+
Sbjct: 566 YEMLTDMEKEGK-KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Query: 394 ACAHAGLVEQAIQLFEEM-LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
A G +++A++LF++M L + PNT +NI+++A + L
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK-------------------L 665
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT---PTTSTYNTLLKACGSD 509
G+FG Q LS E P TYN L K C ++
Sbjct: 666 GNFG-------------------------QALSLKEEMKMKMVRPNVETYNALFK-CLNE 699
Query: 510 YYHAKALI---NEMKTVGLSPNQITWSILIDICGGTENV 545
+ L+ +EM PNQIT IL++ G++ +
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 174/411 (42%), Gaps = 51/411 (12%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM--NVNSRDLTYTLNI 298
PN+Y Y +++ G+ ++ ++ + P+ + + SL+ +DL +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M G + + +Y L+ CVA R+D A D++ ++K E ++ TY+ +IK
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR----TYTVLIK 331
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
++ AL + +M G+ N ++ LI++ E+A +L +ML G P
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
N +N ++ N K+G I +A V
Sbjct: 392 NVITYNALI--------------------------------NGYCKRGMIEDAVDV---- 415
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKALINEMKTVGLSPNQITWSILID 537
+ E +P T TYN L+K C S+ + A ++N+M + P+ +T++ LID
Sbjct: 416 -----VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
+ N + A +L M D G+ PD YT+ I +SK ++A L++ ++ ++P
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 598 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
N V Y L+ K G V E L + M PN LI C
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLML---EKMLSKNCLPNSLTFNALIHGLC 578
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 187/451 (41%), Gaps = 59/451 (13%)
Query: 241 PNMYIYRAIIDA-CGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLN 297
PN++ Y +ID+ C C F K+R + +L + + PN+ +N+L+N + + ++
Sbjct: 356 PNIHTYTVLIDSLCSQC-KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL--DVFTYST 355
+ ++M++ L P+ +YN L+K C +++K + L + K+ DV TY++
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYC-------KSNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I + + A ++ M G+ + ++S+I++ + VE+A LF+ + G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
PN + ++ +A + D A KML + +P
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLE-----KML-----------------SKNCLP 565
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWS 533
N T+N L+ +D A L +M +GL P T +
Sbjct: 566 NSL-------------------TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
ILI + + A + M +G KPD YTT I+ A + +M+
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQ 653
+ P+ TY++L+K YG + + + + M+ G +P+ + LI+ E
Sbjct: 667 GVSPDLFTYSSLIKG---YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 654 DNREYQAEFSSIKKSELERPQSLLLEKIAAH 684
+ + E ++ LLEK+ H
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 17/338 (5%)
Query: 316 ILLKACCVAGRVDLAQDMYKELKHLESVG-RLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
+++K+C G D+ +++ E + KL + Y+T++ A L +V
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
+M V N ++ ++N G VE+A Q +++ AG +P+ + ++ +
Sbjct: 208 EMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK 267
Query: 435 QYDRAFRFFHSW--KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 492
D AF+ F+ KG + E ++L G + A + + E F
Sbjct: 268 DLDSAFKVFNEMPLKGCRR----NEVAYTHLIHG-LCVARRIDEAMDLFVKMKDDECF-- 320
Query: 493 TPTTSTYNTLLKA-CGSDY-YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
PT TY L+K+ CGS+ A L+ EM+ G+ PN T+++LID E A E
Sbjct: 321 -PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 610
+L M + G+ P+VI Y I + + A+ + E M+S ++ PN TYN L+K
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 611 KYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
K V + + + M + P+ LI+ C
Sbjct: 440 KSN----VHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 193/441 (43%), Gaps = 31/441 (7%)
Query: 220 KRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIY 279
K R A+E Y + P++ Y +++ G D + +++ + PN+Y
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 280 VFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL 337
F + V R + I + M + G PD+ +Y +L+ A C A ++D A+++++++
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 338 KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAH 397
K GR K D TY T++ F+D + + +M G + V ++ L++A
Sbjct: 320 K----TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 398 AGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE 457
AG +A + M G PN +N ++ + + D A F GN + S G
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF----GN--MESLG- 428
Query: 458 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY------ 511
+K + + + +S E F T ++ AC + Y
Sbjct: 429 -----VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV-ACNASLYSLAKAG 482
Query: 512 ---HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
AK + +K +GL P+ +T+++++ ++ AI++L M + G +PDVI
Sbjct: 483 RDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
+ I ++ +A ++ MK ++ P VTYNTLL K G ++Q+ + +++ M
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG---KIQEAIELFEGM 599
Query: 629 QKAGYKPNDYYLEELIEEWCE 649
+ G PN L + C+
Sbjct: 600 VQKGCPPNTITFNTLFDCLCK 620
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 196/441 (44%), Gaps = 52/441 (11%)
Query: 208 HILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE 267
+ + ++ F RDL S + + ++K P++ + ++DA G+F ++ +
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 268 DLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
+ +Q I PN++ +N+L+ + L L ++ M++LG+KP +Y + + +G
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
A + ++++K + ++ + + A A + A ++ + ++ G+ ++
Sbjct: 448 DSVSALETFEKMK----TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
V ++ ++ + G +++AI+L EM+ GCEP+ N +++ +A + D A++ F
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
K K+ PT TYNTLL
Sbjct: 564 MKEMKL-----------------------------------------KPTVVTYNTLLAG 582
Query: 506 CGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
G + A L M G PN IT++ L D + V A+++L M D G PD
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 623
V Y T I V++ K+A+ + +MK ++P++VT TLL K + + + +
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 624 IYQDMQKAGYKPNDYYLEELI 644
+ + +P + + E+LI
Sbjct: 702 NF--LYNCADQPANLFWEDLI 720
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 144/303 (47%), Gaps = 19/303 (6%)
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
TY+ +I +A + ++A V ++S G + ++ L++A +G +++ +L++EM
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 412 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG----SFGEGYNSNLKQGS 467
CE NT NI++ V+A D A ++ ++ ++G + K G
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 468 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGL 525
++ A + G +L + R P + YN L+ G + A AL M G+
Sbjct: 907 LYEAKQLFEG-----MLDYGCR----PNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
P+ T+S+L+D V+ + K + ++G+ PDV+ Y I +S ++AL
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 586 LYEEMKSCE-IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
L+ EMK+ I P+ TYN+L+ G V E + IY ++Q+AG +PN + LI
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK---IYNEIQRAGLEPNVFTFNALI 1074
Query: 645 EEW 647
+
Sbjct: 1075 RGY 1077
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 192/423 (45%), Gaps = 27/423 (6%)
Query: 231 YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--N 288
+D ++K + + Y I + + G ++ Y + N Y +N L+++
Sbjct: 141 FDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLK 200
Query: 289 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 348
SR T + +Y+ M G +P + +Y+ L+ + R D+ M LK +E++G LK
Sbjct: 201 SRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG--LGKRRDIDSVM-GLLKEMETLG-LKP 256
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
+V+T++ I+V A A ++ M G + V ++ LI+A A ++ A ++F
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQ 465
E+M +P+ + +L + D +F+ + + + +F ++ K
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 466 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH----AKALINEMK 521
G+ A + + IL P TYNTL+ CG H A L M+
Sbjct: 377 GNFGEAFDTLDVMRDQGIL---------PNLHTYNTLI--CGLLRVHRLDDALELFGNME 425
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
++G+ P T+ + ID G + + A+E + M GI P+++A ++ ++ +
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 582 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLE 641
+A ++ +K + P+ VTYN ++K SK G E+ + + + +M + G +P+ +
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG---EIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 642 ELI 644
LI
Sbjct: 543 SLI 545
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 48/349 (13%)
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
+++ +++ G PD+ +YN LL A +G++D ++YKE+ S + + T++ +
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM----STHECEANTITHNIV 861
Query: 357 IKVFADAKLWQMALKVKHD-MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
I A AL + +D M + + LI+ + +G + +A QLFE ML G
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C PN +NI+++ +A + D A F EG +LK S+
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRM--------VKEGVRPDLKTYSVLVDCLCM 973
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 535
G + + F E+K GL+P+ + ++++
Sbjct: 974 VGRVDEGLHYF-------------------------------KELKESGLNPDVVCYNLI 1002
Query: 536 IDICGGTENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
I+ G + +E A+ + M + GI PD+ Y + I + ++A +Y E++
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEEL 643
+ PN T+N L++ S G + + A+YQ M G+ PN E+L
Sbjct: 1063 LEPNVFTFNALIRGYSLSG---KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 179/416 (43%), Gaps = 28/416 (6%)
Query: 229 EAYDALKKHLD---GPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
EAY+ LK+ D GP++ Y +IDA ++ ++E + + P+ + +L+
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 286 N--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 343
+ ++RDL + M+ G PD+ ++ IL+ A C AG A D L +
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT---LDVMRDQ 392
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
G L ++ TY+T+I AL++ +M S GV + I+ +G
Sbjct: 393 GILP-NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 463
A++ FE+M G PN N L++ +A + A + F+ G K +G + N+
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY---GLKDIGLVPDSVTYNM 508
Query: 464 ------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI 517
K G I A + S+++ S NTL KA D A +
Sbjct: 509 MMKCYSKVGEIDEAIKLL-----SEMMENGCEPDVIVVNSLINTLYKADRVD--EAWKMF 561
Query: 518 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 577
MK + L P +T++ L+ G ++ AIE+ + M G P+ I + T ++
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 578 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 633
AL + +M P+ TYNT++ K G +V++ + + M+K Y
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG---QVKEAMCFFHQMKKLVY 674
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 118/236 (50%), Gaps = 8/236 (3%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLD-GPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQ 272
+IS K ++ AL+ Y L D P Y +ID G +++ ++E +L+
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 273 KITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
PN ++N L+N + + +++ M G++PD+ +Y++L+ C+ GRVD
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSA-GVNLNTVAWS 389
+KELK L DV Y+ II + + AL + ++M+++ G+ + ++
Sbjct: 981 LHYFKELKE----SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
SLI AG+VE+A +++ E+ AG EPN FN ++ + + + A+ + +
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 136/341 (39%), Gaps = 15/341 (4%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++ +MQ +K D +Y + K+ V G + A ++++ V L+ ++Y+ +I
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFV----LNAYSYNGLI 195
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ ++ A++V M G + +SSL+ ++ + L +EM G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
PN F I + A + + A+ K + G G + I T
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEIL------KRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSIL 535
++ + P TY TLL + D K +EM+ G P+ +T++IL
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
+D N A + L M D GI P++ Y T I + AL L+ M+S +
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
P TY + K G + L ++ M+ G PN
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSA---LETFEKMKTKGIAPN 467
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 184/421 (43%), Gaps = 25/421 (5%)
Query: 223 DLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFN 282
D L + LK+ P + Y +I+ G K+ + + + + N+ ++
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 283 SLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHL 340
++N V +D +++ M G+KPD+ YN ++ A C G +D A KE++ L
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 341 ESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL 400
R + T+ II +A + + +L+V MR G ++ LIN
Sbjct: 584 ----RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 401 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGE 457
+E+A+++ +EM LAG N + I+ +AF +F + + + ++
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 699
Query: 458 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTS-TYNTLLKACG--SDYYHAK 514
+ K G + +A V S I P S YN L+ D + A
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNI----------PRNSFVYNILIDGWARRGDVWEAA 749
Query: 515 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 574
LI +MK G+ P+ T++ I C ++ A + ++ M G+KP++ YTT IK
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 575 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV---QQCLAIYQDMQKA 631
+ ++AL+ YEEMK+ I P+ Y+ LL + S+ E + I ++M +A
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEA 869
Query: 632 G 632
G
Sbjct: 870 G 870
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 187/484 (38%), Gaps = 83/484 (17%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDA-CGLCGDFMKSRYIYE 267
+ + I+ F K +A +D K+ N IY II A C C + ++ +
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC-NMERAEALVR 438
Query: 268 DLLNQKITPNIYVFNSLMNVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
++ + I I +++++M+ + D L +++ ++ G P + +Y L+ G
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
++ A ++ + +K E V K ++ TYS +I F K W A V DM G+ +
Sbjct: 499 KISKALEVSRVMKE-EGV---KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
+ ++++I+A G +++AIQ +EM P T+ F I+H ++ R+
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL----- 609
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
++ R PT T+N L+
Sbjct: 610 ------------------------------------EVFDMMRRCGCVPTVHTFNGLING 633
Query: 506 CGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
KA +++EM G+S N+ T++ ++ + A E + + G+ D
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE----VQ 619
+ Y +K C +S + AL + +EM + I N YN L+ ++ G V E +Q
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 620 Q----------------------------CLAIYQDMQKAGYKPNDYYLEELIEEWCEGV 651
Q ++M+ G KPN LI+ W
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 652 IQDN 655
+ +
Sbjct: 814 LPEK 817
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/475 (19%), Positives = 194/475 (40%), Gaps = 71/475 (14%)
Query: 226 SALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
+ + A++ + K P+ + ++ G GD ++R +E + + ITP ++ SL+
Sbjct: 296 AVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLI 351
Query: 286 NVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHL--- 340
+ + RD+ L+ + M+ G++ + +Y++++ AG + A + E K +
Sbjct: 352 HAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT 411
Query: 341 ----------------------ESVGR------LKLDVFTYSTIIKVFADAKLWQMALKV 372
E++ R + + Y T++ + + L V
Sbjct: 412 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVV 471
Query: 373 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
++ G V + LIN G + +A+++ M G + N + ++++++ V+
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 433 ACQYDRAFRFFHSW--KG--------NKMLGSFGEGYNSNLKQGSI-------HNATT-- 473
+ AF F +G N ++ +F N + ++ H TT
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 474 ---VPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMK 521
+ +G++ S ++ R PT T+N L+ KA +++EM
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
G+S N+ T++ ++ + A E + + G+ D+ Y +K C +S +
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 582 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
AL + +EM + I N YN L+ ++ G V E + Q M+K G KP+
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEGVKPD 763
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 142/343 (41%), Gaps = 23/343 (6%)
Query: 308 KPDMTSYNILLKACCVAGRVDLAQDMYKELK--HLESVGRLKLDVFTYSTIIKVFADAKL 365
KP T + +++K G + A++ ++ ++ + R+ Y+++I +A +
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI------YTSLIHAYAVGRD 359
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
AL M+ G+ ++ V +S ++ + AG E A F+E N +
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK--QGSIHNATTVPNGFSNSQI 483
I++A + C +RA + EG ++ + + T V + +
Sbjct: 420 IIYAHCQTCNMERAEALVREME--------EEGIDAPIAIYHTMMDGYTMVADEKKGLVV 471
Query: 484 LSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGG 541
+ FTPT TY L+ +KAL MK G+ N T+S++I+
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 542 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
++ A + + M G+KPDVI Y I N +A+ +EM+ P T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 602 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
+ ++ +K G ++++ L ++ M++ G P + LI
Sbjct: 592 FMPIIHGYAKSG---DMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 201 ASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFM 260
A +P ++ +I + +R D+ A + +KK P+++ Y + I AC GD
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 261 KSRYIYEDLLNQKITPNIYVFNSLMNVNSRDL--TYTLNIYQIMQNLGLKPDMTSYNILL 318
++ E++ + PNI + +L+ +R L+ Y+ M+ +G+KPD Y+ LL
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Query: 319 KA 320
+
Sbjct: 842 TS 843
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 161/341 (47%), Gaps = 18/341 (5%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P+ +YN L+ C AG+++ A+++ +K E +K +V T +TI+ M
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNM 459
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
A+ DM GV N V + +LI+AC VE+A+ +E+ML AGC P+ + + ++
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFG-EGYNSNLKQGSIHNATTVPNGFSNSQILSFT 487
+ + A R K G F + N+ G + + ++L+
Sbjct: 520 GLCQVRRDHDAIRVVEKLKE----GGFSLDLLAYNMLIGLFCDKNNTEKVY---EMLTDM 572
Query: 488 ERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 545
E+ P + TYNTL+ G D+ + ++ +M+ GL P T+ +ID +
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 546 EGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 604
+ A+++ K MG + + P+ + Y I + NF QAL+L EEMK + PN TYN
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 605 LLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
L K ++ + + L + +M + +PN +E L+E
Sbjct: 693 LFKCLNEKT---QGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 168/379 (44%), Gaps = 32/379 (8%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
I DL+ K FN+L++ R D++ ++ M + ++PD+ + IL+ C
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 323 VAGRVDLAQDMYKEL--KHLESVGRLKLDVFTYSTII----KVFADAKLWQMALKVKHDM 376
+ RVD A ++++++ K + +K D ++T+I KV + ++ +++K +
Sbjct: 341 KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
R A N V ++ LI+ AG +E A ++ M +PN N I+
Sbjct: 401 RCAP---NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 437 DRAFRFFHSWKGNKMLGSFGEGYNSNL--KQGSIHNATTVPNGFSNSQILSFTERF---P 491
+ A FF + EG N+ IH +V N + + + E+
Sbjct: 458 NMAVVFFMDMEK--------EGVKGNVVTYMTLIHACCSVSNV---EKAMYWYEKMLEAG 506
Query: 492 FTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
+P Y L+ C H A ++ ++K G S + + +++LI + N E
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
E+L M G KPD I Y T I + K+F+ + E+M+ + P TY ++ A
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA- 625
Query: 610 SKYGSVLEVQQCLAIYQDM 628
Y SV E+ + L +++DM
Sbjct: 626 --YCSVGELDEALKLFKDM 642
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 216/519 (41%), Gaps = 91/519 (17%)
Query: 59 WNISRTL---DSPLSPNHYARVASKLAQDIEMVLQEDPVDSGVNVELLAKLVVLGI---- 111
W+I L +PL + + S L +++++ D V V++ +V LGI
Sbjct: 279 WDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINT 338
Query: 112 --RGRNVWTVIDTLKKVQGLEISLSAHLNASAM---DVIAAECRRMVMSGHIAEAVELME 166
+ R V ++ +K++G + A ++ +I C+ G + EA EL+
Sbjct: 339 LCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK----VGRLKEAEELL- 393
Query: 167 VLARFQLPIRELVQPSDMIKRCVLS---RNPKLA--------VRYASLLPHAHILFCNII 215
++ + E P+ + C++ R KL ++ + P+ + I+
Sbjct: 394 ----VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV-VTVNTIV 448
Query: 216 SEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKIT 275
+ L A+ + ++K N+ Y +I AC + K+ Y YE +L +
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
P+ ++ +L++ R + + + ++ G D+ +YN+L+ C + +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---TEKV 565
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
Y+ L +E G+ K D TY+T+I F K ++ ++ MR G++ + ++I+
Sbjct: 566 YEMLTDMEKEGK-KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Query: 394 ACAHAGLVEQAIQLFEEM-LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
A G +++A++LF++M L + PNT +NI+++A + L
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK-------------------L 665
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT---PTTSTYNTLLKACGSD 509
G+FG Q LS E P TYN L K C ++
Sbjct: 666 GNFG-------------------------QALSLKEEMKMKMVRPNVETYNALFK-CLNE 699
Query: 510 YYHAKALI---NEMKTVGLSPNQITWSILIDICGGTENV 545
+ L+ +EM PNQIT IL++ G++ +
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 207/498 (41%), Gaps = 52/498 (10%)
Query: 212 CNII-SEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
CNI+ + + + EA+D + K + P++Y++ I+A G ++ ++ +
Sbjct: 229 CNILLTSLVRANEFQKCCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 271 NQKITPNIYVFNSLMN----VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ PN+ FN++++ D + + M G++P + +Y+IL+K A R
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ D Y LK + G +V Y+ +I F +A A+++K M S G++L +
Sbjct: 346 IG---DAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++LI G + A +L +EML G N F ++ +D A RF
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 447 ------KGNKMLGSFGEGYNSNLKQGS--------IHNATTVPNGFSNSQILSFTERFPF 492
G +L + G + K ++ V SN+ + E
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 493 TPTTS---------------TYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSIL 535
+YNTL+ C +A ++EM GL P+ T+SIL
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 536 IDICG--GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
I CG VE AI+ G+ PDV Y+ I C +++ ++ ++EM S
Sbjct: 582 I--CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQ 653
+ PN V YN L++A + G + L + +DM+ G PN LI+ +I
Sbjct: 640 NVQPNTVVYNHLIRAYCRSG---RLSMALELREDMKHKGISPNSATYTSLIKGM--SIIS 694
Query: 654 DNREYQAEFSSIKKSELE 671
E + F ++ LE
Sbjct: 695 RVEEAKLLFEEMRMEGLE 712
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/501 (20%), Positives = 202/501 (40%), Gaps = 87/501 (17%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDF---------M 260
LF I+ F K + A++ + +++ PN+ + +ID G+CG + M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 261 KSR--------------------------YIYEDLLNQKITPNIYVFNSLMN--VNSRDL 292
R ++ +++ + PN+ V+N+L++ + + L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 293 TYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFT 352
+ I +M + GL ++YN L+K C G+ D A+ + KE+ S+G ++ +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML---SIG-FNVNQGS 437
Query: 353 YSTIIKVFADAKLWQMALKV------------------------KHDMRSAGVNL----- 383
++++I + ++ AL+ KH S + L
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 384 ------NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
+T ++L++ AG +++A ++ +E+L GC + +N ++ C + D
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 438 RAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTS 497
AF F G + Y ++ + N V Q +R P
Sbjct: 558 EAFMFLDEMVKR---GLKPDNYTYSILICGLFNMNKVEEAI---QFWDDCKRNGMLPDVY 611
Query: 498 TYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
TY+ ++ C + +EM + + PN + ++ LI + + A+E+ + M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 556 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
GI P+ YT+ IK ++A L+EEM+ + PN Y L+ K G +
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 616 LEVQQCLAIYQDMQKAGYKPN 636
++V +CL ++M PN
Sbjct: 732 VKV-ECL--LREMHSKNVHPN 749
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 150/371 (40%), Gaps = 53/371 (14%)
Query: 254 GLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKP 309
GLC G K+ ++ LN+ + N+L++ + L I + + G
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 310 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQM 368
D SYN L+ CC ++D A E+ V R LK D +TYS +I + +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEM-----VKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
A++ D + G+ + +S +I+ C A E+ + F+EM+ +PNT +N ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
A Y R+ R + + L++ H
Sbjct: 654 A------YCRSGRLSMALE---------------LREDMKHKG----------------- 675
Query: 489 RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 546
+P ++TY +L+K S AK L EM+ GL PN ++ LID G +
Sbjct: 676 ---ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
+L+ M + P+ I YT I N +A L EM+ I P+ +TY +
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 607 KARSKYGSVLE 617
K G VLE
Sbjct: 793 YGYLKQGGVLE 803
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 168/400 (42%), Gaps = 58/400 (14%)
Query: 253 CGLCGDFMKS---RYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYT--LNIYQIMQNLGL 307
C LC M R++ E LL + ++P + +L++ + ++ L ++ N G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLL-RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 308 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLW 366
D + N LL C AG++D A + KE+ +GR +D +Y+T+I K
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEI-----LGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
A +M G+ + +S LI + VE+AIQ +++ G P+ ++++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 486
+ C +A + + FF E + N++
Sbjct: 617 IDGCCKAERTEEGQEFFD------------EMMSKNVQ---------------------- 642
Query: 487 TERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTEN 544
P T YN L++A C S A L +MK G+SPN T++ LI
Sbjct: 643 -------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 545 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 604
VE A + + M G++P+V YT I + + L EM S +HPN +TY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 605 LLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
++ ++ G+V E + L +M++ G P+ +E I
Sbjct: 756 MIGGYARDGNVTEASRLL---NEMREKGIVPDSITYKEFI 792
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 153/342 (44%), Gaps = 36/342 (10%)
Query: 290 RDLTY-TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LK 347
RD Y L+++ ++ N G+ P T+ NILL + + A + K + + V + +
Sbjct: 204 RDGCYLALDVFPVLANKGMFPSKTTCNILLTS------LVRANEFQKCCEAFDVVCKGVS 257
Query: 348 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 407
DV+ ++T I F + A+K+ M AGV N V ++++I+ G ++A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 408 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH--SWKG--------NKMLGSFGE 457
E+M+ G EP ++I++ A + A+ + KG N ++ SF
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF-- 375
Query: 458 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKA 515
++ GS++ A + + S+ LS T+STYNTL+K C + +A+
Sbjct: 376 -----IEAGSLNKAIEIKD-LMVSKGLSL--------TSSTYNTLIKGYCKNGQADNAER 421
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
L+ EM ++G + NQ +++ +I + + A+ + M + P TT I
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
+ +AL L+ + + + T N LL + G + E
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 207/498 (41%), Gaps = 52/498 (10%)
Query: 212 CNII-SEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
CNI+ + + + EA+D + K + P++Y++ I+A G ++ ++ +
Sbjct: 229 CNILLTSLVRANEFQKCCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 271 NQKITPNIYVFNSLMN----VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ PN+ FN++++ D + + M G++P + +Y+IL+K A R
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK--EKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ D Y LK + G +V Y+ +I F +A A+++K M S G++L +
Sbjct: 346 IG---DAYFVLKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++LI G + A +L +EML G N F ++ +D A RF
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 447 ------KGNKMLGSFGEGYNSNLKQGS--------IHNATTVPNGFSNSQILSFTERFPF 492
G +L + G + K ++ V SN+ + E
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 493 TPTTS---------------TYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSIL 535
+YNTL+ C +A ++EM GL P+ T+SIL
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 536 IDICG--GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
I CG VE AI+ G+ PDV Y+ I C +++ ++ ++EM S
Sbjct: 582 I--CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQ 653
+ PN V YN L++A + G + L + +DM+ G PN LI+ +I
Sbjct: 640 NVQPNTVVYNHLIRAYCRSG---RLSMALELREDMKHKGISPNSATYTSLIKGM--SIIS 694
Query: 654 DNREYQAEFSSIKKSELE 671
E + F ++ LE
Sbjct: 695 RVEEAKLLFEEMRMEGLE 712
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/501 (20%), Positives = 202/501 (40%), Gaps = 87/501 (17%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDF---------M 260
LF I+ F K + A++ + +++ PN+ + +ID G+CG + M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 261 KSR--------------------------YIYEDLLNQKITPNIYVFNSLMN--VNSRDL 292
R ++ +++ + PN+ V+N+L++ + + L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 293 TYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFT 352
+ I +M + GL ++YN L+K C G+ D A+ + KE+ S+G ++ +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML---SIG-FNVNQGS 437
Query: 353 YSTIIKVFADAKLWQMALKV------------------------KHDMRSAGVNL----- 383
++++I + ++ AL+ KH S + L
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 384 ------NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
+T ++L++ AG +++A ++ +E+L GC + +N ++ C + D
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 438 RAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTS 497
AF F G + Y ++ + N V Q +R P
Sbjct: 558 EAFMFLDEMVKR---GLKPDNYTYSILICGLFNMNKVEEAI---QFWDDCKRNGMLPDVY 611
Query: 498 TYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
TY+ ++ C + +EM + + PN + ++ LI + + A+E+ + M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 556 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
GI P+ YT+ IK ++A L+EEM+ + PN Y L+ K G +
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 616 LEVQQCLAIYQDMQKAGYKPN 636
++V +CL ++M PN
Sbjct: 732 VKV-ECL--LREMHSKNVHPN 749
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 150/371 (40%), Gaps = 53/371 (14%)
Query: 254 GLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKP 309
GLC G K+ ++ LN+ + N+L++ + L I + + G
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 310 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQM 368
D SYN L+ CC ++D A E+ V R LK D +TYS +I + +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEM-----VKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
A++ D + G+ + +S +I+ C A E+ + F+EM+ +PNT +N ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
A Y R+ R + + L++ H
Sbjct: 654 A------YCRSGRLSMALE---------------LREDMKHKG----------------- 675
Query: 489 RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 546
+P ++TY +L+K S AK L EM+ GL PN ++ LID G +
Sbjct: 676 ---ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
+L+ M + P+ I YT I N +A L EM+ I P+ +TY +
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 607 KARSKYGSVLE 617
K G VLE
Sbjct: 793 YGYLKQGGVLE 803
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 168/400 (42%), Gaps = 58/400 (14%)
Query: 253 CGLCGDFMKS---RYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYT--LNIYQIMQNLGL 307
C LC M R++ E LL + ++P + +L++ + ++ L ++ N G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLL-RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 308 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLW 366
D + N LL C AG++D A + KE+ +GR +D +Y+T+I K
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEI-----LGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
A +M G+ + +S LI + VE+AIQ +++ G P+ ++++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 486
+ C +A + + FF E + N++
Sbjct: 617 IDGCCKAERTEEGQEFFD------------EMMSKNVQ---------------------- 642
Query: 487 TERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTEN 544
P T YN L++A C S A L +MK G+SPN T++ LI
Sbjct: 643 -------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 545 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 604
VE A + + M G++P+V YT I + + L EM S +HPN +TY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 605 LLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
++ ++ G+V E + L +M++ G P+ +E I
Sbjct: 756 MIGGYARDGNVTEASRLL---NEMREKGIVPDSITYKEFI 792
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 153/342 (44%), Gaps = 36/342 (10%)
Query: 290 RDLTY-TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LK 347
RD Y L+++ ++ N G+ P T+ NILL + + A + K + + V + +
Sbjct: 204 RDGCYLALDVFPVLANKGMFPSKTTCNILLTS------LVRANEFQKCCEAFDVVCKGVS 257
Query: 348 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 407
DV+ ++T I F + A+K+ M AGV N V ++++I+ G ++A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 408 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH--SWKG--------NKMLGSFGE 457
E+M+ G EP ++I++ A + A+ + KG N ++ SF
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF-- 375
Query: 458 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKA 515
++ GS++ A + + S+ LS T+STYNTL+K C + +A+
Sbjct: 376 -----IEAGSLNKAIEIKD-LMVSKGLSL--------TSSTYNTLIKGYCKNGQADNAER 421
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
L+ EM ++G + NQ +++ +I + + A+ + M + P TT I
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
+ +AL L+ + + + T N LL + G + E
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 168/377 (44%), Gaps = 53/377 (14%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNI 298
P ++ Y +ID GD +R ++E++ + + P+ +NS+++ + L T+
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
++ M+++ +PD+ +YN L+ C G++ + + Y+E+K LK +V +YST++
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG----NGLKPNVVSYSTLVD 375
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
F + Q A+K DMR G+ N ++SLI+A G + A +L EML G E
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
N + ++ +A + A F G + A +PN
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELF----------------------GKMDTAGVIPN-- 471
Query: 479 SNSQILSFTERFPFTPTTSTYNTLL----KACGSDYYHAKALINEMKTVGLSPNQITWSI 534
++YN L+ KA D A L+NE+K G+ P+ + +
Sbjct: 472 -----------------LASYNALIHGFVKAKNMD--RALELLNELKGRGIKPDLLLYGT 512
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
I E +E A ++ M + GIK + + YTT + +S N + L L +EMK +
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 595 IHPNWVTYNTLLKARSK 611
I VT+ L+ K
Sbjct: 573 IEVTVVTFCVLIDGLCK 589
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 198/432 (45%), Gaps = 42/432 (9%)
Query: 220 KRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIY 279
K D+ +A ++ +K P+ Y ++ID G G + +E++ + P++
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333
Query: 280 VFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL 337
+N+L+N + L L Y+ M+ GLKP++ SY+ L+ A C G + A Y ++
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 338 KHLESVGRLKLDVFTYSTIIKVFADAKLWQM--ALKVKHDMRSAGVNLNTVAWSSLINAC 395
+ + V + +TY+++I A+ K+ + A ++ ++M GV N V +++LI+
Sbjct: 394 RRVGLVP----NEYTYTSLID--ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK----- 450
A +++A +LF +M AG PN +N ++H V+A DRA + KG
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 451 -MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD 509
+ G+F G S K I A V N I + Y TL+ A
Sbjct: 508 LLYGTFIWGLCSLEK---IEAAKVVMNEMKECGI---------KANSLIYTTLMDA---- 551
Query: 510 YYHAKA------LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG-DAGIKP 562
Y+ + L++EMK + + +T+ +LID + V A++ + D G++
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 622
+ +T I + + A TL+E+M + P+ Y +L+ K G+VLE L
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA---L 668
Query: 623 AIYQDMQKAGYK 634
A+ M + G K
Sbjct: 669 ALRDKMAEIGMK 680
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 162/357 (45%), Gaps = 45/357 (12%)
Query: 263 RYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+ ++D++ P ++ +N +++ + D+ +++ M+ GL PD +YN ++
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
GR+D ++E+K + + DV TY+ +I F + L+ +M+ G
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCC----EPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 440
+ N V++S+L++A G+++QAI+ + +M G PN + ++ A + AF
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 441 RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
R GN+ML G +N + T + +G +++ +
Sbjct: 423 RL-----GNEML-QVGVEWN-------VVTYTALIDGLCDAERMK--------------- 454
Query: 501 TLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
A+ L +M T G+ PN +++ LI +N++ A+E+L + GI
Sbjct: 455 -----------EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
KPD++ Y T I + + A + EMK C I N + Y TL+ A K G+ E
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 138/343 (40%), Gaps = 64/343 (18%)
Query: 327 VDLAQD---MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM--RSAGV 381
V+L +D +K K + K V +Y + + A+++ A V +M A
Sbjct: 116 VELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADC 175
Query: 382 NLNTVAWSS-------------LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
++ V WS+ L + G++E+AIQ F +M P T+ N +LH
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
+ + D RFF M+G+
Sbjct: 236 RFAKLGKTDDVKRFFKD-----MIGAGAR------------------------------- 259
Query: 489 RFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 546
PT TYN ++ C D A+ L EMK GL P+ +T++ +ID G ++
Sbjct: 260 -----PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
+ + M D +PDVI Y I + L Y EMK + PN V+Y+TL+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
A K G + QQ + Y DM++ G PN+Y LI+ C+
Sbjct: 375 DAFCKEGMM---QQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 182/426 (42%), Gaps = 29/426 (6%)
Query: 213 NIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYI--YEDLL 270
N +FGK L LE Y +K + PN+ Y ++DA C + M + I Y D+
Sbjct: 340 NCFCKFGK---LPIGLEFYREMKGNGLKPNVVSYSTLVDA--FCKEGMMQQAIKFYVDMR 394
Query: 271 NQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
+ PN Y + SL++ N + +L+ + M +G++ ++ +Y L+ C A R+
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
A++++ ++ + L +Y+ +I F AK AL++ ++++ G+ + + +
Sbjct: 455 EAEELFGKMDTAGVIPNLA----SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
+ I +E A + EM G + N+ + ++ A ++ K
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Query: 449 NKM---LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
+ + +F + K + A N SN F + + ++
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND--------FGLQANAAIFTAMIDG 622
Query: 506 CGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
D A L +M GL P++ ++ L+D NV A+ + M + G+K D
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV---LEVQQ 620
++AYT+ + ++A + EEM IHP+ V ++LK + G + +E+Q
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
Query: 621 CLAIYQ 626
L +Q
Sbjct: 743 YLMKHQ 748
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/509 (20%), Positives = 213/509 (41%), Gaps = 74/509 (14%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ FC +I+ F KR ++ A + + +++ P++ Y +ID G ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 269 LLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
L++ + ++ VF+S ++V S DL +Y+ M G+ P++ +Y IL+K C GR
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 327 VDLAQDMYKEL--KHLE--------------SVGRLKL---------------DVFTYST 355
+ A MY ++ + +E G L+ DV Y
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
++ + L A++ M + LN V ++SLI+ ++A+++F M + G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 416 CEPNTQCFNIILHACV---EACQYDR---AFRFFHSWKGNKMLGSFG------------- 456
+P+ F ++ + C++ + + F + NK+
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 457 -----EGYNSNLKQGSIHNATTVPN----GFSNSQILSFTERF-------PFTPTTSTYN 500
+ +NL +G + N G+ + + L ER PF P T T
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 501 TLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 558
L+ +D A + + M G PN +T+ L+D + ++EG+ ++ + M +
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 559 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 618
GI P +++Y+ I + +A ++ + ++ P+ V Y L++ K G ++E
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Query: 619 QQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
+Y+ M + G KP+D L+ + E+
Sbjct: 767 A---LLYEHMLRNGVKPDD-LLQRALSEY 791
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 199/484 (41%), Gaps = 80/484 (16%)
Query: 221 RRDLISALEAYDAL-KKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIY 279
R DLI+ + +D L + ++ + + ++DA G+ K+ + ++ + I
Sbjct: 196 RVDLIA--DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV 253
Query: 280 VFNSLMNVNSRD-LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK 338
N ++ S D + + ++ + G P++ ++ L+ C G +D A D++K +
Sbjct: 254 SCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM- 312
Query: 339 HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
E G ++ D+ YST+I + A + M K+ GV L+ V +SS I+ +
Sbjct: 313 --EQRG-IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 399 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 458
G + A +++ ML G PN + I++ CQ R + F G +G+
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKG---LCQDGRIYEAF---------GMYGQ- 416
Query: 459 YNSNLKQG---SIHNATTVPNGF-------SNSQILSFTERFPFTPTTSTYNTLLKACGS 508
LK+G SI +++ +GF S + + + P Y L+
Sbjct: 417 ---ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 509 DYYHAKALINEMKTVGLSP--NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
A+ +K +G S N + ++ LID + A+++ + MG GIKPDV
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 567 YTTAIKVCVESKNFKQ------ALTLYEEMKSCEI------------------------- 595
+TT ++V + F + L L++ M+ +I
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 593
Query: 596 ----------HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
P+ VTYNT++ Y S+ + + I++ ++ + PN L LI
Sbjct: 594 FFNNLIEGKMEPDIVTYNTMI---CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 650
Query: 646 EWCE 649
C+
Sbjct: 651 VLCK 654
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 185/403 (45%), Gaps = 37/403 (9%)
Query: 248 AIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNL 305
+II A G +++ ++E+L I P +N+L+ V + L ++ M+
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G+ PD +Y++L+ A AGR + A+ + KE++ G ++ + F +S ++ F D
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEME----AGDVQPNSFVFSRLLAGFRDRGE 424
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
WQ +V +M+S GV + ++ +I+ ++ A+ F+ ML G EP+ +N
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT---VPNGFSNSQ 482
++ H G ++ E + + ++G + ATT + N + + +
Sbjct: 485 LIDC--------------HCKHGRHIVAE--EMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 483 ILSFTERF-------PFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWS 533
+R P T+ TL+ G + A + EMK+VGL P+ ++
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
LI+ E A+ + M G+KP ++A + I E + +A + + MK
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 648
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ P+ VTY TL+KA + V + Q+ +Y++M +G KP+
Sbjct: 649 GVKPDVVTYTTLMKALIR---VDKFQKVPVVYEEMIMSGCKPD 688
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 209/487 (42%), Gaps = 88/487 (18%)
Query: 245 IYRAIIDACGLCGDFMKSRYIYED-LLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQI 301
+Y +I A G +S +YE LL+QK T +N+L+ +R D+ LN+
Sbjct: 169 LYSILIHALG------RSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 222
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVD--LAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
M+ G + D +Y++++++ + ++D + +YKE++ +L+LDV + II
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER----DKLELDVQLVNDIIMG 278
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
FA + AL++ ++ G++ T S+I+A A +G +A LFEE+ +G +P
Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNATTV-- 474
T+ +N +L V+ A + + ++ ++ + G +A V
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 475 --------PNGFSNSQILS-FTERFPF---------------TPTTSTYNTLLKACGSD- 509
PN F S++L+ F +R + P YN ++ G
Sbjct: 399 EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458
Query: 510 -YYHAKALINEMKTVGLSPNQITWSILIDI------------------------CGGTEN 544
HA + M + G+ P+++TW+ LID C T N
Sbjct: 459 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 518
Query: 545 V-----------EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
+ + +L M GI P+V+ +TT + V +S F A+ EEMKS
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQ 653
+ P+ YN L+ A ++ G +Q + ++ M G KP+ L LI + E
Sbjct: 579 GLKPSSTMYNALINAYAQRGL---SEQAVNAFRVMTSDGLKPSLLALNSLINAFGE---- 631
Query: 654 DNREYQA 660
D R+ +A
Sbjct: 632 DRRDAEA 638
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 118/243 (48%), Gaps = 6/243 (2%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+F +++ F R + + +K P+ Y +ID G + ++
Sbjct: 410 FVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDR 469
Query: 269 LLNQKITPNIYVFNSLMNVNSRDLTYTL--NIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+L++ I P+ +N+L++ + + + + +++ M+ G P T+YNI++ + R
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
D DM + L ++S G L +V T++T++ V+ + + A++ +M+S G+ ++
Sbjct: 530 WD---DMKRLLGKMKSQGILP-NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 585
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++LINA A GL EQA+ F M G +P+ N +++A E + AF
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 447 KGN 449
K N
Sbjct: 646 KEN 648
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 225 ISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSL 284
I A E ++A+++ P Y +I++ G + + + + +Q I PN+ +L
Sbjct: 496 IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 285 MNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLES 342
++V + + + + M+++GLKP T YN L+ A G L++ + + S
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG---LSEQAVNAFRVMTS 612
Query: 343 VGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 402
G LK + +++I F + + A V M+ GV + V +++L+ A +
Sbjct: 613 DG-LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQ 671
Query: 403 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 439
+ ++EEM+++GC+P+ + +++ A Q RA
Sbjct: 672 KVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 206/490 (42%), Gaps = 59/490 (12%)
Query: 213 NIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQ 272
+I++ +RR S Y + P+++IY + C G + K + +++ +
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 273 KITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
I PN+Y++ + RD + ++++M+ G+ P++ +Y+ ++ C G V A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+YKE+ V L +V + T++ F A+ A + M GV+ N ++
Sbjct: 289 YGLYKEIL----VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGN 449
LI+ +G + +A+ L EM P+ + I+++ C+E Q A R F K
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED-QVAEANRLFQKMKNE 403
Query: 450 KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD 509
++ P+++TYN+L+ +
Sbjct: 404 RIF-----------------------------------------PSSATYNSLIHGYCKE 422
Query: 510 YYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
Y +AL +EM G+ PN IT+S LID +++ A+ + M GI PDV+ Y
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
T I + N K+AL LY +M IHPN T+ L+ K G + + YQ+
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG---RLSVAIDFYQE 539
Query: 628 MQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQAEFSSIKKSELERPQSLLLEKIAAHLL 686
+ N LIE C+ G I + FS ++ + + + HL
Sbjct: 540 NNQQRSCWNHVGFTCLIEGLCQNGYILRASRF---FSDMRSCGITPDICSYVSMLKGHLQ 596
Query: 687 -KRVADILAI 695
KR+ D + +
Sbjct: 597 EKRITDTMML 606
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 177/418 (42%), Gaps = 60/418 (14%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
A + ++ +KKH PN+Y Y A+ID G+ ++ +Y+++L ++ PN+ VF +L++
Sbjct: 253 AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVD 312
Query: 287 --VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
+R+L +++ M G+ P++ YN L+ C +G + A + E++ L
Sbjct: 313 GFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN--- 369
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
L DVFTY+ +I A ++ M++ + ++ ++SLI+ +EQA
Sbjct: 370 -LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 405 IQLFEEMLLAGCEPNTQCFNIIL--HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 462
+ L EM +G EPN F+ ++ + V + F + KG
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG-------------- 474
Query: 463 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEM 520
P TY L+ A ++ A L ++M
Sbjct: 475 -----------------------------IVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Query: 521 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 580
G+ PN T++ L+D + AI+ + + + +T I+ ++
Sbjct: 506 LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYI 565
Query: 581 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ--QCLAIYQDMQKAGYKPN 636
+A + +M+SC I P+ +Y ++LK + + + QC DM K G PN
Sbjct: 566 LRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC-----DMIKTGILPN 618
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 199/457 (43%), Gaps = 40/457 (8%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
+LE + + + P++Y AI+ + G+ + +++L +KI P++ FN L+N
Sbjct: 182 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN 241
Query: 287 VNSRDLTYTLNIY--QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
V + ++ + Y Q M+ G P + +YN +L C GR A ++ L H++S G
Sbjct: 242 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL---LDHMKSKG 298
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
+ DV TY+ +I + + DMR ++ N V +++LIN ++ G V A
Sbjct: 299 -VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 405 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---------- 454
QL EML G PN FN ++ + + A + F+ + + S
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 455 --------FGEGYNSNLKQ-----GSIHNATTV----PNGFSNSQILSFTE--RFPFTPT 495
G+ +K+ G I + NGF + ++ E + P
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 496 TSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 553
TY+ L+ C + AK ++ + VGLSPN I +S LI C ++ AI I +
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
+M G D + + ++ +A M S I PN V+++ L+ YG
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING---YG 594
Query: 614 SVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
+ E + +++ +M K G+ P + L++ C+G
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 171/419 (40%), Gaps = 78/419 (18%)
Query: 234 LKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRD 291
++K + PN Y +I+ G + + + ++L+ ++PN FN+L++ ++ +
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 292 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK-HLESVGRLKL-- 348
L ++ +M+ GL P SY +LL C DLA+ Y +K + VGR+
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 349 ----------------------------DVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
D+ TYS +I F ++ A ++ + G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 440
++ N + +S+LI C G +++AI+++E M+L G + FN+++ + +A + A
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 441 RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
F + +L P T +++
Sbjct: 569 EFMRCMTSDGIL-----------------------------------------PNTVSFD 587
Query: 501 TLLKACGSDYYHAKAL--INEMKTVGLSPNQITW-SILIDICGGTENVEGAIEILKSMGD 557
L+ G+ KA +EM VG P T+ S+L +C G E A + LKS+
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE-AEKFLKSLHA 646
Query: 558 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 616
D + Y T + +S N +A++L+ EM I P+ TY +L+ + G +
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 189/469 (40%), Gaps = 31/469 (6%)
Query: 155 SGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYA-----SLLPHAHI 209
GH+ EA + ++ L + ++ + + C K + S+LP ++
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 210 LFCNIISEFGKR-RDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ ++IS ++ + +I+ L A +A + PN +Y +D G + Y E
Sbjct: 691 -YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 749
Query: 269 LLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ N TP+I N++++ SR + T ++ M N P++T+YNILL
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
V + +Y+ + + + D T +++ ++ + ++ LK+ GV ++
Sbjct: 810 VSTSFLLYRSI----ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH-- 444
++ LI+ C G + A L + M G + + ++ ++ + H
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 445 -----SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTY 499
S + K +G N + G I A V +I P ++
Sbjct: 926 SKQGISPESRKYIGLI----NGLCRVGDIKTAFVVKEEMIAHKICP-----PNVAESAMV 976
Query: 500 NTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
L K +D A L+ M + L P +++ L+ +C NV A+E+ M + G
Sbjct: 977 RALAKCGKAD--EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG 1034
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
+K D+++Y I + A LYEEMK N TY L++
Sbjct: 1035 LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 99/266 (37%), Gaps = 46/266 (17%)
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
N N + LI G+++ ++++F M L G P+ N IL + V++ + +
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 442 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
F K+ P +T+N
Sbjct: 220 FLKEMLKRKI-----------------------------------------CPDVATFNI 238
Query: 502 LLKA-CGSDYYHAKA-LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
L+ C + + L+ +M+ G +P +T++ ++ + AIE+L M G
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 619
+ DV Y I S + L +M+ IHPN VTYNTL+ S G VL
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 620 QCLAIYQDMQKAGYKPNDYYLEELIE 645
Q L +M G PN LI+
Sbjct: 359 QLL---NEMLSFGLSPNHVTFNALID 381
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 216/526 (41%), Gaps = 75/526 (14%)
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
+P F ++ F ++ SAL + KH PN IY+ +I + C ++
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 264 YIYEDLLNQKITPNIYVFNS-LMNVNSRD-LTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+ E++ P+ FN ++ + D + + M G PD +Y L+
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 322 CVAGRVDLAQDMYKELKHLESV------------GRLK----------------LDVFTY 353
C GRVD A+D++ + E V GRL DV TY
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 354 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 413
+++I + L +AL+V HDMR+ G N +++ L++ G +++A + EM
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 414 AGCEPNTQCFNIILHACVEACQYDRAFRFFHS----------WKGNKMLGSFGEG----- 458
G +PNT FN ++ A + + A F + N ++ E
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 459 ----YNSNLKQGSIHNATTVPNGFSNSQILSFTER--------------FPFTPTTS-TY 499
+ +G + N T N+ I +F R F +P TY
Sbjct: 513 ALWLLRDMISEGVVANTVTY-----NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 500 NTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD 557
N+L+K + A++L +M G +P+ I+ +ILI+ + VE A+E K M
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 558 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
G PD++ + + I + + LT++ ++++ I P+ VT+NTL+ K G V +
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 618 VQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNRE-YQAEF 662
CL + + ++ G+ PN L++ D R Y A F
Sbjct: 688 A--CLLLDEGIED-GFVPNHRTWSILLQSIIPQETLDRRRFYNAAF 730
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 116/525 (22%), Positives = 204/525 (38%), Gaps = 121/525 (23%)
Query: 245 IYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLT------YTLNI 298
+Y+ +I G G+F + + ++ I +F S+M RD T +
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM----RDYDKAGFPGQTTRL 168
Query: 299 YQIMQNL-GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
M+N+ +P SYN++L+ +A +++ ++ ++ +FT+ ++
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR----KIPPTLFTFGVVM 224
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
K F AL + DM G N+V + +LI++ + V +A+QL EEM L GC
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG--------SFGEGYNSNLKQGSIH 469
P+ + FN ++ + C++DR + N+ML ++G N K G +
Sbjct: 285 PDAETFNDVI---LGLCKFDRINE--AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 470 NA---------------TTVPNGF--------SNSQILSFTERFPFTPTTSTYNTLL--- 503
A T+ +GF + + + + P TYN+L+
Sbjct: 340 AAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 504 ------------------KACGSDYY----------------HAKALINEMKTVGLSPNQ 529
K C + Y A ++NEM GL PN
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
+ ++ LI + A+EI + M G KPDV + + I E K AL L +
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 590 MKSCEIHPNWVTYNTLLKARSKYGSVL--------------------------------E 617
M S + N VTYNTL+ A + G + E
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 618 VQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQAE 661
V + ++++ M + G+ P++ LI C G++++ E+Q E
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 223/506 (44%), Gaps = 44/506 (8%)
Query: 149 CRRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAH 208
CR V + +L E L++ +L +L D+ V SR P
Sbjct: 37 CRCWVRASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSR------------PFPS 84
Query: 209 ILFCNIISEFGKRRDLISALEAYD---ALKKHLD----GPNMYIYRAIIDACGLCGDFMK 261
I+ +F + I L+ YD +L K ++ ++Y + +I+ C
Sbjct: 85 IV------DFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSL 138
Query: 262 SRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLK 319
+ I +L P+ SL+N R ++ +++ M +G KPD+ +YN ++
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 320 ACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSA 379
+ C RV+ A D +KE++ ++ +V TY+ ++ ++ W A ++ DM
Sbjct: 199 SLCKTKRVNDAFDFFKEIER----KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 380 GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 439
+ N + +S+L++A G V +A +LFEEM+ +P+ ++ +++ + D A
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 440 FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTY 499
+ F G + + N A V +G ++ + T TY
Sbjct: 315 NQMFDLMVSK---GCLADVVSYNTLINGFCKAKRVEDGM---KLFREMSQRGLVSNTVTY 368
Query: 500 NTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILI-DICGGTENVEGAIEILKSMG 556
NTL++ D A+ ++M G+SP+ T++IL+ +C E +E A+ I + M
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE-LEKALVIFEDMQ 427
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 616
+ D++ YTT I+ ++ ++A +L+ + + P+ VTY T++ G +
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 617 EVQQCLAIYQDMQKAGYKPNDYYLEE 642
EV+ A+Y M++ G ND L +
Sbjct: 488 EVE---ALYTKMKQEGLMKNDCTLSD 510
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 163/375 (43%), Gaps = 37/375 (9%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P + +N LL A + D+ + K+++ L ++ D++T++ +I F +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG----IRNDLYTFNIVINCFCCCFQVSL 138
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
AL + M G + V SL+N V A+ L ++M+ G +P+ +N I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS------- 481
+ + + + AF FF + +G N + T + NG NS
Sbjct: 199 SLCKTKRVNDAFDFFKEIER--------KGIRPN-----VVTYTALVNGLCNSSRWSDAA 245
Query: 482 QILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDIC 539
++LS + TP TY+ LL A AK L EM + + P+ +T+S LI+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
+ ++ A ++ M G DV++Y T I ++K + + L+ EM + N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 600 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQ 659
VTYNTL++ + G V + Q+ + M G P+ + L+ C DN E +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQE---FFSQMDFFGISPDIWTYNILLGGLC-----DNGELE 417
Query: 660 AE---FSSIKKSELE 671
F ++K E++
Sbjct: 418 KALVIFEDMQKREMD 432
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 401 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM--LGSFGEG 458
+ AI LF +M+ + P+ FN +L A V+ +YD G KM LG +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISL-----GKKMEVLGIRNDL 120
Query: 459 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKAL 516
Y N+ V S IL + + P T +L+ C + A +L
Sbjct: 121 YTFNIVINCFCCCFQVSLALS---ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 517 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 576
+++M +G P+ + ++ +ID T+ V A + K + GI+P+V+ YT +
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 577 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
S + A L +M +I PN +TY+ LL A K G VLE ++ ++++M + P+
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE---LFEEMVRMSIDPD 294
Query: 637 DYYLEELIEEWC 648
LI C
Sbjct: 295 IVTYSSLINGLC 306
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 189/426 (44%), Gaps = 64/426 (15%)
Query: 219 GKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKI--TP 276
G+ +D IS LE D + LD +Y + + AC K R + E K+ P
Sbjct: 414 GRIKDCISLLEDLDQ-RDLLDMDKIY-HASFFKAC------KKQRAVKEAFRFTKLILNP 465
Query: 277 NIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMY 334
+ FN LM+V +S+D+ + +++Q G+ D Y L+ +C +G+VD M+
Sbjct: 466 TMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDA---MF 522
Query: 335 KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 394
+ + + G ++ ++ T+ +I A A A +RS V + V +++LI+A
Sbjct: 523 EVFHQMSNSG-VEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 395 CAHAGLVEQAIQLFEEMLLAG--CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
C +G V++A + EM +P+ ++ AC A Q +RA
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERA------------- 628
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDY 510
++ ++ T Y + +C D+
Sbjct: 629 ----------------------------KEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDW 660
Query: 511 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 570
A ++ +MK ++P+++ +S LID+ G + ++ A IL+ GI+ I+Y++
Sbjct: 661 DFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL 720
Query: 571 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
+ C +K++K+AL LYE++KS ++ P T N L+ A + ++ + + +++
Sbjct: 721 MGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGN---QLPKAMEYLDEIKT 777
Query: 631 AGYKPN 636
G KPN
Sbjct: 778 LGLKPN 783
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 162/380 (42%), Gaps = 53/380 (13%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDL 269
L+ +IS K + + E + + N++ + A+ID C G K+ Y L
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 270 LNQKITPNIYVFNSLMNV----NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
++ + P+ VFN+L++ + D + + + + PD S L+KACC AG
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
+V+ A+++Y+ + G ++ Y+ + + + W A + DM+ V +
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEV----YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDE 679
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
V +S+LI+ HA ++++A + ++ G T ++ ++ AC A + +A +
Sbjct: 680 VFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
K K+ PT ST N L+ A
Sbjct: 740 IKSIKL-----------------------------------------RPTISTMNALITA 758
Query: 506 C--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
G+ A ++E+KT+GL PN IT+S+L+ ++ E + ++L G+ P+
Sbjct: 759 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Query: 564 VIAYTTAIKVCVESKNFKQA 583
+I +C + F++A
Sbjct: 819 LIMCRCITSLC--KRRFEKA 836
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/456 (19%), Positives = 188/456 (41%), Gaps = 50/456 (10%)
Query: 151 RMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHI- 209
R++ G I + + L+E L + L + + + K C R K A R+ L+ + +
Sbjct: 409 RLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMS 468
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDL 269
F ++S +D+ A +++ + +Y +I +C G ++ +
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 270 LNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRV 327
N + N++ F +L++ +R + Y I+++ +KPD +N L+ AC +G V
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 328 DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA 387
D A D+ E+K + D + ++K +A + A +V + G+
Sbjct: 589 DRAFDVLAEMK--AETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV 646
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 447
++ +N+C+ +G + A ++++M P+ F+ ++ A D AF K
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 448 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC- 506
+ ++ G+I +Y++L+ AC
Sbjct: 707 ------------SQGIRLGTI-----------------------------SYSSLMGACC 725
Query: 507 -GSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDV 564
D+ A L ++K++ L P T + LI +C G + + A+E L + G+KP+
Sbjct: 726 NAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ-LPKAMEYLDEIKTLGLKPNT 784
Query: 565 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 600
I Y+ + +F+ + L + K + PN +
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/385 (19%), Positives = 151/385 (39%), Gaps = 68/385 (17%)
Query: 299 YQIMQNLGLKPDMT-SYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
+++ + G P+ + +YN LL+ GR+ +D L+ L+ L +D +++
Sbjct: 391 FELHNSNGRSPETSDAYNRLLRD----GRI---KDCISLLEDLDQRDLLDMDKIYHASFF 443
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
K A Q A+K +N ++ L++ CA + +E A + + +G
Sbjct: 444 K----ACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMT 499
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
+ + + ++ +C ++ + D F FH + G +NL
Sbjct: 500 ADCKLYTTLISSCAKSGKVDAMFEVFHQMSNS--------GVEANLH------------- 538
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSIL 535
T+ L+ C AKA +++ + P+++ ++ L
Sbjct: 539 --------------------TFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 536 IDICGGTENVEGAIEILKSMGDAG--IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
I CG + V+ A ++L M I PD I+ +K C + ++A +Y+ +
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY 638
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE-------- 645
I Y + + SK G + +IY+DM++ P++ + LI+
Sbjct: 639 GIRGTPEVYTIAVNSCSKSG---DWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKML 695
Query: 646 EWCEGVIQDNREYQAEFSSIKKSEL 670
+ G++QD + +I S L
Sbjct: 696 DEAFGILQDAKSQGIRLGTISYSSL 720
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 194/445 (43%), Gaps = 34/445 (7%)
Query: 230 AYDALKKHLDG---PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
AY LKK + P +Y +I + +CGD DL + + + L
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGS--ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK 448
Query: 287 VNSRDLTYTL----------NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKE 336
+N T L ++ + M G PD ++Y+ +L C A +++LA +++E
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
Query: 337 LKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 396
+K G L DV+TY+ ++ F A L + A K ++MR G N V +++LI+A
Sbjct: 509 MKR----GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS-- 454
A V A +LFE ML GC PN ++ ++ +A Q ++A + F G+K +
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 455 -FGEGYNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKA- 505
+ + Y+ N ++ ++ + +GF S ++L P Y+ L+
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 506 CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 564
C A+ + EM G T+S LID + + A ++L M + P+V
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 565 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 624
+ YT I + +A L + M+ PN VTY ++ +G + +++ CL +
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG---FGMIGKIETCLEL 801
Query: 625 YQDMQKAGYKPNDYYLEELIEEWCE 649
+ M G PN LI+ C+
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCK 826
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 162/407 (39%), Gaps = 79/407 (19%)
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSY 314
G + K+ + +++ Q P+ ++ ++N N+ + +++ M+ GL D+ +Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
I++ + C AG ++ A+ + E++ + +V TY+ +I + AK A ++
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYTALIHAYLKAKKVSYANELFE 577
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE------------------------ 410
M S G N V +S+LI+ AG VE+A Q+FE
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 411 ---------------------------MLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
M + GCEPN ++ ++ + + D A
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA---- 693
Query: 444 HSWKGNKMLGSFGE-GYNSNLKQGS--IHNATTVPNGFSNSQILSFTERFPFTPTTSTY- 499
++ E G+ + L S I V S++LS P Y
Sbjct: 694 -----QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 500 ---NTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 556
+ L K +D A L+ M+ G PN +T++ +ID G +E +E+L+ MG
Sbjct: 749 EMIDGLCKVGKTD--EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
G+ P+ + Y I C ++ A L EEMK +W T+
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK----QTHWPTHT 849
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 161/384 (41%), Gaps = 30/384 (7%)
Query: 267 EDLLNQKITPNIYVFNSLMNV----NSRDLTYTLNIYQI--MQNLGLKPDMTSYNILLKA 320
E+ L Q + VF +NV + R+ ++++ + ++ +++ +P ++YN L++A
Sbjct: 185 EEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQA 244
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
A R+D A +++E+ S+ L++D FT W+ AL + + +
Sbjct: 245 FLKADRLDSASLIHREM----SLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETEN 297
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 440
+TV ++ LI+ A L E+A+ M C PN ++ +L C+ Q R
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 441 RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
R + M+ G + + +H T + ++L + P YN
Sbjct: 358 RVLN------MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYN 411
Query: 501 TLLKA-CGS-DYYH------AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
L+ + CG D + A+ +EM G+ N+I S E A ++
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+ M G PD Y+ + + + A L+EEMK + + TY ++ + K
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPN 636
G ++Q + +M++ G PN
Sbjct: 532 GL---IEQARKWFNEMREVGCTPN 552
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 169/422 (40%), Gaps = 34/422 (8%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ + +I + K + + A E ++ + PN+ Y A+ID G K+ I+E
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 269 LLNQKIT----------------PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPD 310
+ K PN+ + +L++ S + + M G +P+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 311 MTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMAL 370
Y+ L+ C G++D AQ++ E+ S ++TYS++I + K +A
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEM----SEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 371 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 430
KV M N V ++ +I+ G ++A +L + M GC+PN + ++
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 431 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF 490
+ + G+K + Y + + A V + +L ++
Sbjct: 790 GMIGKIETCLELLERM-GSKGVAPNYVTYRVLIDHCCKNGALDVAH-----NLLEEMKQT 843
Query: 491 PFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
+ T+ Y +++ ++ + L++E+ +P + +LID + +E A+
Sbjct: 844 HWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVES----KNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
+L+ + A ++ Y++ +ES + A L+ EM + P ++ +L+
Sbjct: 904 LLEEV--ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Query: 607 KA 608
K
Sbjct: 962 KG 963
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 188/400 (47%), Gaps = 23/400 (5%)
Query: 264 YIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
Y+Y++++ +KI PN++ FN ++N + + ++ + M+ G P++ SYN L+
Sbjct: 209 YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGY 268
Query: 322 CVAGRVDLAQDMYKELKHLESV--GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSA 379
C G MYK L+ + + ++ T++ +I F ++KV +M
Sbjct: 269 CKLGG---NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 380 GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 439
V N ++++SLIN + G + +AI + ++M+ AG +PN +N +++ + A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 440 FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTY 499
F S KG G+ N+ + + +GF+ + + ER P TY
Sbjct: 386 LDMFGSVKGQ---GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM---EREGIVPDVGTY 439
Query: 500 NTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMG 556
N L+ + AK L +++ + GL P+ +T+ IL++ C E+ + A+ +LK M
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM-LLKEMS 497
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTYNTLLKARSKYGSV 615
G+KP + Y +K + N K A + +M K + N +YN LL+ S+ G +
Sbjct: 498 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557
Query: 616 LEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC-EGVIQD 654
+ L +M + G PN E + EE +G + D
Sbjct: 558 EDANMLL---NEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 50/262 (19%)
Query: 407 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 466
+++EM+ +PN FN++++A + + ++A
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA--------------------------- 242
Query: 467 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C----GSDYYHAKALINEMK 521
++ + + +P +YNTL+ C Y A A++ EM
Sbjct: 243 --------------RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
+SPN T++ILID +N+ G++++ K M D +KP+VI+Y + I
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 582 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLE 641
+A+++ ++M S + PN +TYN L+ K +++ L ++ ++ G P
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDM---LKEALDMFGSVKGQGAVPTTRMYN 405
Query: 642 ELIEEWCE-GVIQDNREYQAEF 662
LI+ +C+ G I D + E
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEM 427
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 54/340 (15%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNI 298
PN+ + +ID + S +++++L+Q + PN+ +NSL+N N ++ +++
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
M + G++P++ +YN L+ C + A DM+ +K +V ++ Y+ +I
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM----YNMLID 409
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
+ +K +M G+ + ++ LI G +E A +LF+++ G P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-P 468
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG------------EGYNSNLKQG 466
+ F+I++ + +A K + G +GY K+G
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLL------KEMSKMGLKPRHLTYNIVMKGY---CKEG 519
Query: 467 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVG 524
++ AT + + L ++YN LL+ A L+NEM G
Sbjct: 520 NLKAATNMRTQMEKERRLRM--------NVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Query: 525 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 564
L PN+IT+ I + + M D G PD+
Sbjct: 572 LVPNRITYEI----------------VKEEMVDQGFVPDI 595
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 8/227 (3%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
I + +I+ F K L AL+ + ++K P +Y +IDA G + E+
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 269 LLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ + I P++ +N L+ R ++ ++ + + GL PD+ +++IL++ C G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM-RSAGVNLNT 385
A + KE+ + LK TY+ ++K + + A ++ M + + +N
Sbjct: 486 SRKAAMLLKEMSKMG----LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
+++ L+ + G +E A L EML G PN + I+ V+
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 204/469 (43%), Gaps = 30/469 (6%)
Query: 201 ASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFM 260
+ L+P A + ++I + + +++ E +KK + Y Y ++ GD
Sbjct: 376 SGLIPQAQA-YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 261 KSRYIYEDLLNQKITPNIYVFNSLMNV---NSRDLTYTLNIYQIMQNLGLKPDMTSYNIL 317
+ I ++++ PN+ ++ +L+ NSR + + + M+ G+ PD+ YN L
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR-FGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 318 LKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
+ A R+D A+ E+ LK + FTY I + +A + A K +MR
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVE----NGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 378 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
GV N V + LIN G V +A + M+ G + + + ++++ + + D
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 438 RAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 494
A F +G + + S+G N K G++ A+++ + + TP
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL---------TP 660
Query: 495 TTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
YN LL C S + AK L++EM GL PN +T+ +ID + ++ A +
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY-EEMKSCEIHPNWVTYNTLLKARSK 611
M G+ PD YTT + C + ++A+T++ K C + +N L+ K
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC--ASSTAPFNALINWVFK 778
Query: 612 YGSVLEVQQCLAIYQD--MQKAGYKPNDYYLEELIEEWC-EGVIQDNRE 657
+G + L D + G KPND +I+ C EG ++ +E
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKE 826
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 184/414 (44%), Gaps = 27/414 (6%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLT----YTLNIY 299
Y+Y I G K++ +++ ++ + P + SL+ R+ Y L +
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+N+ + P +Y ++K C +G +D A ++ KE+ + +V Y+T+IK
Sbjct: 408 MKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEM----IASGCRPNVVIYTTLIKT 461
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
F + A++V +M+ G+ + ++SLI + A +++A EM+ G +PN
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWK-----GNKMLGSFGEGYNSNLKQGSIHNATTV 474
+ + +EA ++ A ++ + NK+L + N K+G + A +
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT--GLINEYCKKGKVIEACSA 579
Query: 475 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSI 534
+ IL + + T N L K D A+ + EM+ G++P+ ++ +
Sbjct: 580 YRSMVDQGILGDAKTY-----TVLMNGLFKNDKVD--DAEEIFREMRGKGIAPDVFSYGV 632
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
LI+ N++ A I M + G+ P+VI Y + S ++A L +EM
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
+HPN VTY T++ K G + E ++ +M+ G P+ + L++ C
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEA---FRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 187/482 (38%), Gaps = 91/482 (18%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNI 298
PN + Y A I +F + +++ + PN + L+N + +
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTII 357
Y+ M + G+ D +Y +L+ +VD A+++++E++ G+ + DVF+Y +I
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-----GKGIAPDVFSYGVLI 634
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
F+ Q A + +M G+ N + ++ L+ +G +E+A +L +EM + G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
PN + I+ ++ AFR F K + VP+
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL----------------------VPDS 732
Query: 478 FSNSQILSFTERF-PFTPTTSTYNTLLKACGSDYYHAKALIN--------EMKTVGLS-- 526
F + ++ R + + T K C S ALIN E+KT L+
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 527 ----------PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 576
PN +T++I+ID N+E A E+ M +A + P VI YT+ + +
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 577 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV--------------------- 615
+ +++E + I P+ + Y+ ++ A K G
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 616 LEVQQCLAIYQDMQKAG----------------YKPNDYYLEELIEEWCEGVIQDNREYQ 659
L + C A+ K G Y P+ + ELI E C I N+ +
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC---ISSNQRVE 969
Query: 660 AE 661
A+
Sbjct: 970 AD 971
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 54/348 (15%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
GL P +Y++L+ C R++ A+ + L ++S+G + LD TYS +I +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSL---LVEMDSLG-VSLDNHTYSLLIDGLLKGRN 327
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
A + H+M S G+N+ + I + G++E+A LF+ M+ +G P Q +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY-- 385
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY--NSNLKQGSIHNATTVPNGFSNSQI 483
S EGY N++QG ++
Sbjct: 386 ---------------------------ASLIEGYCREKNVRQG--------------YEL 404
Query: 484 LSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGG 541
L ++ + TY T++K C S D A ++ EM G PN + ++ LI
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 542 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
A+ +LK M + GI PD+ Y + I ++K +A + EM + PN T
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 602 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
Y + S Y E ++M++ G PN LI E+C+
Sbjct: 525 YGAFI---SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 160/402 (39%), Gaps = 63/402 (15%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++ L L P ++ +LL A R+DL D+YK + V DV TY +I
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV----FDVKTYHMLI 228
Query: 358 KVFADAKLWQMA----LKVKHDMRSAGVNLNTV-----------------AWSSLINACA 396
A Q+ K + + R+A +N++ + LI+
Sbjct: 229 IAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
+E A L EM G + +++++ ++ D A H + S G
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE------MVSHG 342
Query: 457 EGYNSNL---------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C 506
+ K+G + A + +G S ++ P Y +L++ C
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI---------PQAQAYASLIEGYC 393
Query: 507 -GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 565
+ L+ EMK + + T+ ++ + +++GA I+K M +G +P+V+
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 566 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 625
YTT IK +++ F A+ + +EMK I P+ YN+L+ SK + E + L
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV-- 511
Query: 626 QDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKK 667
+M + G KPN + I + E +EF+S K
Sbjct: 512 -EMVENGLKPNAFTYGAFISGYIEA---------SEFASADK 543
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 198/459 (43%), Gaps = 37/459 (8%)
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
+PH H + +I+ F +R L AL + K PN+ ++++ ++
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 264 YIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+ + + PN FN+L++ + + + M G +PD+ +Y +++
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C G DLA ++ +++ G+L+ V Y+TII K AL + +M + G+
Sbjct: 232 CKRGDTDLAFNLLNKMEQ----GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
N V +SSLI+ + G A +L +M+ P+ F+ ++ A V+ + A +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 442 FFHSWKGNKMLGSFGEGYNSNLKQG---SIHNATTVPNGF-------SNSQILSFTERFP 491
Y+ +K+ SI +++ NGF Q+ F
Sbjct: 348 L----------------YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 492 FTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
P TYNTL+K C + EM GL N +T++ILI + + A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
EI K M G+ P+++ Y T + ++ ++A+ ++E ++ ++ P TYN +++
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
K G +V+ ++ ++ G KP+ +I +C
Sbjct: 512 CKAG---KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 183/400 (45%), Gaps = 23/400 (5%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
P++ Y +++ GLC GD + + + K+ P + ++N++++ + + L
Sbjct: 219 PDLVTYGVVVN--GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N+++ M+ G++P++ +Y+ L+ C GR A + ++ ++ DVFT+S +
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER----KINPDVFTFSAL 332
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I F A K+ +M ++ + V +SSLIN C H L ++A Q+FE M+
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFEFMVSKH 391
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C P+ +N ++ C+Y R ++ G G N+ + A
Sbjct: 392 CFPDVVTYNTLIKG---FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWS 533
+I P TYNTLL + KA++ ++ + P T++
Sbjct: 449 MA---QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
I+I+ VE ++ ++ G+KPDV+AY T I + ++A L++EMK
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 633
PN YNTL++AR + G + + + ++M+ G+
Sbjct: 566 GTLPNSGCYNTLIRARLRDG---DREASAELIKEMRSCGF 602
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 164/362 (45%), Gaps = 20/362 (5%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+++ II K + + AL + ++ PN+ Y ++I G + + + D
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
++ +KI P+++ F++L++ V L +Y M + P + +Y+ L+ C+ R
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 327 VDLAQDMYKEL--KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
+D A+ M++ + KH DV TY+T+IK F K + ++V +M G+ N
Sbjct: 377 LDEAKQMFEFMVSKHCFP------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
TV ++ LI AG + A ++F+EM+ G PN +N +L + + ++A F
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 445 SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK 504
+ +KM + Y N+ + A V +G+ LS P YNT++
Sbjct: 491 YLQRSKMEPTI---YTYNIMIEGMCKAGKVEDGWDLFCNLSLK---GVKPDVVAYNTMIS 544
Query: 505 A-C--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
C GS A AL EMK G PN ++ LI + E + E++K M G
Sbjct: 545 GFCRKGSK-EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA 603
Query: 562 PD 563
D
Sbjct: 604 GD 605
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 150/347 (43%), Gaps = 23/347 (6%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P + ++ LL A + D+ + +++++L + + +TYS +I F +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG----IPHNHYTYSILINCFCRRSQLPL 134
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
AL V M G N V SSL+N H+ + +A+ L ++M + G +PNT FN ++H
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 429 ACVEACQYDRAFRFFHSW--KGNKM-LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
+ A KG + L ++G N K+G A + N ++
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL-- 252
Query: 486 FTERFPFTPTTSTYNTLLKACGSDYYH---AKALINEMKTVGLSPNQITWSILIDICGGT 542
P YNT++ Y H A L EM+T G+ PN +T+S LI
Sbjct: 253 -------EPGVLIYNTIIDGL-CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
A +L M + I PDV ++ I V+ +A LY+EM I P+ VTY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
++L+ + + E +Q +++ M P+ LI+ +C+
Sbjct: 365 SSLINGFCMHDRLDEAKQ---MFEFMVSKHCFPDVVTYNTLIKGFCK 408
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 20/329 (6%)
Query: 310 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD-AKLWQM 368
D+ +Y +L A G+ + A D+++ +K + L TY+ I+ VF + W+
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL----VTYNVILDVFGKMGRSWRK 264
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
L V +MRS G+ + S++++ACA GL+ +A + F E+ G EP T +N +L
Sbjct: 265 ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN--SQILSF 486
+A Y A + N YN + A V GFS + ++
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPAD-SVTYNELV-------AAYVRAGFSKEAAGVIEM 376
Query: 487 TERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTEN 544
+ P TY T++ A G +AL MK G PN T++ ++ + G
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 545 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 604
I++L M G P+ + T + +C K ++ EMKSC P+ T+NT
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 605 LLKARSKYGSVLEVQQCLAIYQDMQKAGY 633
L+ A + GS ++ + +Y +M +AG+
Sbjct: 497 LISAYGRCGSEVDASK---MYGEMTRAGF 522
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 183/424 (43%), Gaps = 41/424 (9%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFN---SLMNVNSRDLTYTLN 297
PN Y +IDA G G ++ ++ + PN +N SL+ SR +
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS-NEMIK 442
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
+ M++ G P+ ++N +L C G +++E+K S G + D T++T+I
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK---SCG-FEPDRDTFNTLI 498
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ A K+ +M AG N +++L+NA A G + +M G +
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA-----T 472
P ++++L KG LG E + +K+G I + T
Sbjct: 559 PTETSYSLMLQCYA---------------KGGNYLGI--ERIENRIKEGQIFPSWMLLRT 601
Query: 473 TVPNGF------SNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVG 524
+ F + + + ++ + P +N++L + Y A+ ++ ++ G
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661
Query: 525 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 584
LSP+ +T++ L+D+ A EILK++ + +KPD+++Y T IK ++A+
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 585 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
+ EM I P TYNT + + G E++ + + M K +PN+ + ++
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED---VIECMAKNDCRPNELTFKMVV 778
Query: 645 EEWC 648
+ +C
Sbjct: 779 DGYC 782
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/501 (20%), Positives = 213/501 (42%), Gaps = 61/501 (12%)
Query: 199 RYASLLPHAHILFCNIISE-FGKR-RDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC 256
R + P ++ N+I + FGK R L D ++ + + ++ AC
Sbjct: 235 RMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACARE 294
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYT--LNIYQIMQNLGLKPDMTSY 314
G +++ + +L + P +N+L+ V + YT L++ + M+ D +Y
Sbjct: 295 GLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
N L+ A AG +++ ++ + G + + TY+T+I + A ALK+ +
Sbjct: 355 NELVAAYVRAG---FSKEAAGVIEMMTKKGVMP-NAITYTTVIDAYGKAGKEDEALKLFY 410
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
M+ AG NT ++++++ + I++ +M GC PN +N +L C
Sbjct: 411 SMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG 470
Query: 435 Q---YDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 491
+R FR S +F ++ + GS +A S++ R
Sbjct: 471 MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA---------SKMYGEMTRAG 521
Query: 492 FTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICG------GTE 543
F +TYN LL A D+ + +I++MK+ G P + ++S+++ G E
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 544 NVEGAIE---------ILKSM--------------------GDAGIKPDVIAYTTAIKVC 574
+E I+ +L+++ G KPD++ + + + +
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 575 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYK 634
+ + QA + E ++ + P+ VTYN+L+ + G + ++ I + ++K+ K
Sbjct: 642 TRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE---ILKTLEKSQLK 698
Query: 635 PNDYYLEELIEEWC-EGVIQD 654
P+ +I+ +C G++Q+
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQE 719
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 193/464 (41%), Gaps = 58/464 (12%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
++S + L A E + LK P Y A++ G G + ++ + +++
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 274 ITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
+ +N L+ R + ++M G+ P+ +Y ++ A AG+ D A
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
++ +K V + TY+ ++ + +K+ DM+S G + N W+++
Sbjct: 407 KLFYSMKEAGCVP----NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
+ C + G+ + ++F EM G EP+ FN ++ A Y R +KM
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA------YGRCG---SEVDASKM 513
Query: 452 LGSFGE-GYNSNLKQ-GSIHNATTVPNGF-SNSQILSFTERFPFTPTTSTYNTLLK--AC 506
G G+N+ + ++ NA + S ++S + F PT ++Y+ +L+ A
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 507 GSDY-----------------------------YHAKALINE------MKTVGLSPNQIT 531
G +Y + +AL K G P+ +
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
++ ++ I + A IL+S+ + G+ PD++ Y + + + V +A + + ++
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 592 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
++ P+ V+YNT++K + G +Q+ + + +M + G +P
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGL---MQEAVRMLSEMTERGIRP 734
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 149/342 (43%), Gaps = 33/342 (9%)
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
L+ D+ S L+K +G + A +++ L + G LKLD +++ +
Sbjct: 135 LRTDLVS---LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQY 191
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
+A K+ + L+ A++++++A + G E+AI LFE M G P +N+I
Sbjct: 192 SVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 251
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 486
L D + SW+ K+LG E + LK +TV + + +L
Sbjct: 252 L---------DVFGKMGRSWR--KILGVLDEMRSKGLKFDEF-TCSTVLSACAREGLLRE 299
Query: 487 TERF-------PFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILID 537
+ F + P T TYN LL+ G Y A +++ EM+ + +T++ L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 538 I---CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
G ++ G IE+ M G+ P+ I YTT I ++ +AL L+ MK
Sbjct: 360 AYVRAGFSKEAAGVIEM---MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
PN TYN +L K E+ + L DM+ G PN
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLC---DMKSNGCSPN 455
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 176/426 (41%), Gaps = 27/426 (6%)
Query: 203 LLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKS 262
++P+A I + +I +GK AL+ + ++K+ PN Y A++ G +
Sbjct: 382 VMPNA-ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 263 RYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+ D+ + +PN +N+++ + N + +++ M++ G +PD ++N L+ A
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
G A MY E+ V TY+ ++ A W+ V DM+S G
Sbjct: 501 YGRCGSEVDASKMYGEMTR----AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG-CEPNTQCFNIILHA---CVEACQY 436
++S ++ A G I+ E + G P+ +L A C
Sbjct: 557 FKPTETSYSLMLQCYAKGGNY-LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS 615
Query: 437 DRAFRFF--HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 494
+RAF F H +K + ++ +NS L + +N G IL +P
Sbjct: 616 ERAFTLFKKHGYKPDMVI------FNSMLSIFTRNNMYDQAEG-----ILESIREDGLSP 664
Query: 495 TTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
TYN+L+ + + A+ ++ ++ L P+ ++++ +I ++ A+ +L
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
M + GI+P + Y T + F + + E M + PN +T+ ++ +
Sbjct: 725 SEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA 784
Query: 613 GSVLEV 618
G E
Sbjct: 785 GKYSEA 790
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNI 298
P+ + R ++ A C S + P++ +FNS++++ +R+ Y I
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ ++ GL PD+ +YN L+ G A+++ K L+ +LK D+ +Y+T+IK
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK----SQLKPDLVSYNTVIK 709
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
F L Q A+++ +M G+ +++ ++ G+ + + E M C P
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWK 447
N F +++ A +Y A F K
Sbjct: 770 NELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 199/505 (39%), Gaps = 61/505 (12%)
Query: 151 RMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAH-- 208
R SG+ E++ L+E + R +++ + +IK RN AVR +L
Sbjct: 98 RSCRSGNYIESLHLLETMVRKGYN-PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP 156
Query: 209 --ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIY 266
+ +I+ F K + A D ++ P+ Y +I + G + +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 267 EDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
LL+ P + + L+ + + L + M + GLKPDM +YN +++ C
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 325 GRVDLAQDMYK--ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
G VD A +M + ELK E DV +Y+ +++ + W+ K+ M S +
Sbjct: 277 GMVDRAFEMVRNLELKGCEP------DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
N V +S LI G +E+A+ L + M G P+ ++ ++ A + D A F
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
+ + L P YNT+
Sbjct: 391 LETMISDGCL-----------------------------------------PDIVNYNTV 409
Query: 503 LKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
L + +AL ++ VG SPN +++ + + + A+ ++ M GI
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
PD I Y + I +A L +M+SCE HP+ VTYN +L K ++
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK---AHRIED 526
Query: 621 CLAIYQDMQKAGYKPNDYYLEELIE 645
+ + + M G +PN+ LIE
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIE 551
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 186/431 (43%), Gaps = 62/431 (14%)
Query: 157 HIAEAVELMEVLARFQLPIRELVQPSDMIKR-CVLSRNPKLA-----VRYASLLPHAHIL 210
+I +AV +ME+L +F P ++ + +I C ++R +R P +
Sbjct: 139 NIPKAVRVMEILEKFGQP--DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDT-VT 195
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
+ +I R L AL+ + L P + Y +I+A L G ++ + +++L
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 271 NQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLK---PDMTSYNILLKACCVAGRV 327
++ + P+++ +N+++ ++ +++++NL LK PD+ SYNILL+A G+
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKE-GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 328 D----LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
+ L M+ E + +V TYS +I + A+ + M+ G+
Sbjct: 315 EEGEKLMTKMFSE--------KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+ ++ LI A G ++ AI+ E M+ GC P+ +N +L + + D+A F
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Query: 444 ----------HSWKGNKMLGSFGEGYNSNLKQGSIHNATTV------PNGFSNSQILS-- 485
+S N M + ++S K ++H + P+ + + ++S
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSAL---WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 486 -----FTERFP---------FTPTTSTYN-TLLKACGSDYYH-AKALINEMKTVGLSPNQ 529
E F F P+ TYN LL C + A ++ M G PN+
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 530 ITWSILIDICG 540
T+++LI+ G
Sbjct: 544 TTYTVLIEGIG 554
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 210/479 (43%), Gaps = 31/479 (6%)
Query: 194 PKLAVRYASLLPHAHILFCN---IISEFGKRRDLISALEAYD-ALKKHLDGPNMYIYRAI 249
P + +AS PH+ L ++ + D +AL ++ A KK P +Y I
Sbjct: 32 PSSTISFAS--PHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEI 89
Query: 250 IDACGLCGDFMKSRYIYEDLLNQKITPNIYVF----NSLMNVNSRDLTYTLNIYQIMQNL 305
+ G G F + I ED+ + + F S +D ++ + I
Sbjct: 90 LLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI-DEF 148
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE-SVGRLKLDVFTYSTIIKVFADAK 364
GLKPD YN +L + L E+ H + SV +K DV T++ +IK A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLV-----EISHAKMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 424
+ A+ + DM S G+ + +++++ G ++ A+++ E+M+ GC + N
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVN 263
Query: 425 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 484
+I+H + + + A F G F + Y N + A V + +I+
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQD--GFFPDQYTFNTLVNGLCKAGHVKHAI---EIM 318
Query: 485 SFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGT 542
+ + P TYN+++ C + A ++++M T SPN +T++ LI
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
VE A E+ + + GI PDV + + I+ ++N + A+ L+EEM+S P+ TY
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAE 661
N L+ + G ++ + L + + M+ +G + LI+ +C+ N+ +AE
Sbjct: 439 NMLIDSLCSKG---KLDEALNMLKQMELSGCARSVITYNTLIDGFCKA----NKTREAE 490
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 176/414 (42%), Gaps = 51/414 (12%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNI 298
P++ + +I A + + ED+ + + P+ F ++M + DL L I
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M G S N+++ C GRV+ A + +E+ + + D +T++T++
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG---FFPDQYTFNTLVN 303
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
A + A+++ M G + + ++S+I+ G V++A+++ ++M+ C P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
NT +N ++ K+ + AT +
Sbjct: 364 NTVTYNTLISTLC--------------------------------KENQVEEATELARVL 391
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH--AKALINEMKTVGLSPNQITWSILI 536
++ IL P T+N+L++ H A L EM++ G P++ T+++LI
Sbjct: 392 TSKGIL---------PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
D ++ A+ +LK M +G VI Y T I ++ ++A +++EM+ +
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 597 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
N VTYNTL+ K V + Q + M G KP+ Y L+ +C G
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQ---LMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 155/367 (42%), Gaps = 50/367 (13%)
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
P+ Y FN+L+N + + + + I +M G PD+ +YN ++ C G V A ++
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
++ + + TY+T+I + A ++ + S G+ + ++SLI
Sbjct: 353 LDQMITRDC----SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 394 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG 453
A++LFEEM GCEP+ +N+++ + + D A
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM----------- 457
Query: 454 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSD-YY 511
LKQ + +G + S I TYNTL+ C ++
Sbjct: 458 ---------LKQMEL-------SGCARSVI--------------TYNTLIDGFCKANKTR 487
Query: 512 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
A+ + +EM+ G+S N +T++ LID + VE A +++ M G KPD Y + +
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
+ K+A + + M S P+ VTY TL+ K G V EV L M+
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV-EVASKLLRSIQMKGI 606
Query: 632 GYKPNDY 638
P+ Y
Sbjct: 607 NLTPHAY 613
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 38/279 (13%)
Query: 155 SGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHILFCNI 214
+GH+ A+E+M+V+ ++E P V + N ++
Sbjct: 308 AGHVKHAIEIMDVM------LQEGYDPD------VYTYN-------------------SV 336
Query: 215 ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKI 274
IS K ++ A+E D + PN Y +I ++ + L ++ I
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 275 TPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
P++ FNSL+ +R+ + +++ M++ G +PD +YN+L+ + C G++D A +
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 333 MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
M K+++ L R V TY+T+I F A + A ++ +M GV+ N+V +++LI
Sbjct: 457 MLKQME-LSGCAR---SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL-HAC 430
+ + VE A QL ++M++ G +P+ +N +L H C
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE- 267
I + +I F K A E +D ++ H N Y +ID GLC KSR + +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID--GLC----KSRRVEDA 524
Query: 268 -DLLNQKI----TPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
L++Q I P+ Y +NSL+ R D+ +I Q M + G +PD+ +Y L+
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK-VFADAKLWQMALKVKHDMRSA 379
C AGRV++A + + ++ + + L Y+ +I+ +F K + + +
Sbjct: 585 LCKAGRVEVASKLLRSIQ----MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 380 GVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCEP 418
+ V++ + C G + +A+ E+L G P
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 193/433 (44%), Gaps = 34/433 (7%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
A Y + K P++ Y ++ID CG+ +YED++ P++ ++ L++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 287 VNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
S+ + + + M ++ ++ +N L+ C R D A +++ L +
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR----LMGIY 525
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQ 403
+K DV T++T+++V + AL + M G+ + +A+ +LI+A C H
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK-PTI 584
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 463
+QLF+ M + N+++H + + + A +FF++ KM
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM------------ 632
Query: 464 KQGSIHNATTVPNGFSNSQILSFTERF-------PFTPTTSTYNTLLKAC--GSDYYHAK 514
+ I T+ G+ + + L ER PF P T T L+ +D A
Sbjct: 633 -EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 515 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 574
+ + M G PN +T+ L+D + ++EG+ ++ + M + GI P +++Y+ I
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Query: 575 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYK 634
+ +A ++ + ++ P+ V Y L++ K G ++E +Y+ M + G K
Sbjct: 752 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA---LLYEHMLRNGVK 808
Query: 635 PNDYYLEELIEEW 647
P+D L+ + E+
Sbjct: 809 PDD-LLQRALSEY 820
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/534 (21%), Positives = 225/534 (42%), Gaps = 51/534 (9%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ FC +I+ F KR ++ A + + +++ P++ Y +ID G ++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
L++ + ++ VF+S ++ V S DL +Y+ M G+ P++ +Y IL+K C GR
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 327 VDLAQDMYKEL--KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
+ A MY ++ + +E + TYS++I F + + DM G +
Sbjct: 407 IYEAFGMYGQILKRGMEP------SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
V + L++ + GL+ A++ +ML N FN ++ ++D A + F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF- 519
Query: 445 SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP--FTPTTSTYNTL 502
+++G + G ++ + ++ G + F F P Y TL
Sbjct: 520 -----RLMGIY--GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 503 LKACGSDYYHAKA-----LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD 557
+ A H K L + M+ +S + +++I + +E A + ++ +
Sbjct: 573 IDAFCK---HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 558 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
++PD++ Y T I + +A ++E +K PN VT L+ K +
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN---D 686
Query: 618 VQQCLAIYQDMQKAGYKPN--------DYYLE--------ELIEEWCE-GVIQDNREYQA 660
+ + ++ M + G KPN D++ + +L EE E G+ Y
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 661 EFSSI-KKSELERPQSLLLEKIAAHLLKRVADILAIDVQGLTKVEARLVILAVL 713
+ K+ ++ ++ + I A LL V AI ++G KV RLV A+L
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVV-AYAILIRGYCKV-GRLVEAALL 798
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 180/406 (44%), Gaps = 36/406 (8%)
Query: 221 RRDLISALEAYDAL-KKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIY 279
R DLI+ + +D L + ++ + + ++DA G+ K+ + ++ + I
Sbjct: 196 RVDLIA--DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV 253
Query: 280 VFNSLMNVNSRD-LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK 338
N ++ S D + + ++ + G P++ ++ L+ C G +D A D++K +
Sbjct: 254 SCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM- 312
Query: 339 HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
E G ++ D+ YST+I + A + M K+ GV L+ V +SS I+ +
Sbjct: 313 --EQRG-IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 399 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 458
G + A +++ ML G PN + I++ CQ R + F G +G+
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKG---LCQDGRIYEAF---------GMYGQ- 416
Query: 459 YNSNLKQG---SIHNATTVPNGF-------SNSQILSFTERFPFTPTTSTYNTLLKACGS 508
LK+G SI +++ +GF S + + + P Y L+
Sbjct: 417 ---ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 509 DYYHAKALINEMKTVGLSP--NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
A+ +K +G S N + ++ LID + A+++ + MG GIKPDV
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+TT ++V + ++AL L+ M + P+ + Y TL+ A K+
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 177/427 (41%), Gaps = 44/427 (10%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNI 298
P++ Y +++ G+ K + E + + + PN Y++ S++ + R L
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M G+ PD Y L+ C G + A + E+ + + DV TY+ II
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD----ITPDVLTYTAIIS 394
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
F A K+ H+M G+ ++V ++ LIN AG ++ A ++ M+ AGC P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHS-WKGNKMLGSFGEGYNSNL----KQGSIHNATT 473
N + ++ + D A H WK F YNS + K G+I A
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT--YNSIVNGLCKSGNIEEAVK 512
Query: 474 VPNGFS----NSQILSFTERFP----------------------FTPTTSTYNTLLKA-C 506
+ F N+ +++T PT T+N L+ C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 507 GSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 565
+ L+N M G++PN T++ L+ N++ A I K M G+ PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 566 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 625
Y +K +++N K+A L++EMK + TY+ L+K K LE ++ ++
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VF 689
Query: 626 QDMQKAG 632
M++ G
Sbjct: 690 DQMRREG 696
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 184/426 (43%), Gaps = 57/426 (13%)
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLN---IYQIMQNLGLKPDMTS 313
G ++R ++E +LN + ++ N + S+D T +++ +G+ ++ S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 314 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLK---LDVFTYSTIIKVFADAKLWQMAL 370
YNI++ C GR+ KE HL + LK DV +YST++ +
Sbjct: 249 YNIVIHFVCQLGRI-------KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 371 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 430
K+ M+ G+ N+ + S+I + +A + F EM+ G P+T + ++
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 431 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS----- 485
+ A +FF+ +H+ P+ + + I+S
Sbjct: 362 CKRGDIRAASKFFYE----------------------MHSRDITPDVLTYTAIISGFCQI 399
Query: 486 ---------FTERF--PFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITW 532
F E F P + T+ L+ C + + A + N M G SPN +T+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 533 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
+ LID +++ A E+L M G++P++ Y + + +S N ++A+ L E ++
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 593 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC-EGV 651
++ + VTY TL+ A K G + + Q+ I ++M G +P L+ +C G+
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQE---ILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 652 IQDNRE 657
++D +
Sbjct: 577 LEDGEK 582
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 165/378 (43%), Gaps = 52/378 (13%)
Query: 275 TPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
TP++ +++++N R +L + ++M+ GLKP+ Y ++ C ++ A++
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 333 MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
+ E+ G L D Y+T+I F + A K ++M S + + + ++++I
Sbjct: 338 AFSEMIR---QGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
+ G + +A +LF EM G EP++ F +++ +A AFR
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV---------- 443
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDY 510
+N ++ G +P TY TL+ C D
Sbjct: 444 ------HNHMIQAGC-------------------------SPNVVTYTTLIDGLCKEGDL 472
Query: 511 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 570
A L++EM +GL PN T++ +++ + N+E A++++ AG+ D + YTT
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 571 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
+ +S +A + +EM + P VT+N L+ +G + + ++ L M
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW---MLA 589
Query: 631 AGYKPNDYYLEELIEEWC 648
G PN L++++C
Sbjct: 590 KGIAPNATTFNSLVKQYC 607
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 177/427 (41%), Gaps = 44/427 (10%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNI 298
P++ Y +++ G+ K + E + + + PN Y++ S++ + R L
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M G+ PD Y L+ C G + A + E+ + + DV TY+ II
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD----ITPDVLTYTAIIS 394
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
F A K+ H+M G+ ++V ++ LIN AG ++ A ++ M+ AGC P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHS-WKGNKMLGSFGEGYNSNL----KQGSIHNATT 473
N + ++ + D A H WK F YNS + K G+I A
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT--YNSIVNGLCKSGNIEEAVK 512
Query: 474 VPNGFS----NSQILSFTERFP----------------------FTPTTSTYNTLLKA-C 506
+ F N+ +++T PT T+N L+ C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 507 GSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 565
+ L+N M G++PN T++ L+ N++ A I K M G+ PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 566 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 625
Y +K +++N K+A L++EMK + TY+ L+K K LE ++ ++
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VF 689
Query: 626 QDMQKAG 632
M++ G
Sbjct: 690 DQMRREG 696
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 184/426 (43%), Gaps = 57/426 (13%)
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLN---IYQIMQNLGLKPDMTS 313
G ++R ++E +LN + ++ N + S+D T +++ +G+ ++ S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 314 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLK---LDVFTYSTIIKVFADAKLWQMAL 370
YNI++ C GR+ KE HL + LK DV +YST++ +
Sbjct: 249 YNIVIHFVCQLGRI-------KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 371 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 430
K+ M+ G+ N+ + S+I + +A + F EM+ G P+T + ++
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 431 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS----- 485
+ A +FF+ +H+ P+ + + I+S
Sbjct: 362 CKRGDIRAASKFFYE----------------------MHSRDITPDVLTYTAIISGFCQI 399
Query: 486 ---------FTERF--PFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITW 532
F E F P + T+ L+ C + + A + N M G SPN +T+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 533 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
+ LID +++ A E+L M G++P++ Y + + +S N ++A+ L E ++
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 593 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC-EGV 651
++ + VTY TL+ A K G + + Q+ I ++M G +P L+ +C G+
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQE---ILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 652 IQDNRE 657
++D +
Sbjct: 577 LEDGEK 582
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 165/378 (43%), Gaps = 52/378 (13%)
Query: 275 TPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
TP++ +++++N R +L + ++M+ GLKP+ Y ++ C ++ A++
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 333 MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
+ E+ G L D Y+T+I F + A K ++M S + + + ++++I
Sbjct: 338 AFSEMIR---QGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
+ G + +A +LF EM G EP++ F +++ +A AFR
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV---------- 443
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDY 510
+N ++ G +P TY TL+ C D
Sbjct: 444 ------HNHMIQAGC-------------------------SPNVVTYTTLIDGLCKEGDL 472
Query: 511 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 570
A L++EM +GL PN T++ +++ + N+E A++++ AG+ D + YTT
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 571 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
+ +S +A + +EM + P VT+N L+ +G + + ++ L M
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW---MLA 589
Query: 631 AGYKPNDYYLEELIEEWC 648
G PN L++++C
Sbjct: 590 KGIAPNATTFNSLVKQYC 607
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 214/518 (41%), Gaps = 52/518 (10%)
Query: 139 ASAMDVIAAEC-----RRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRN 193
S VIA C R+M G + EA+++ E + + P L + +I +L R
Sbjct: 338 GSIPSVIAYNCILTCLRKM---GKVDEALKVFEEMKKDAAP--NLSTYNILID--MLCRA 390
Query: 194 PKL--------AVRYASLLPHAHILFCNI-ISEFGKRRDLISALEAYDALKKHLDGPNMY 244
KL +++ A L P+ + NI + K + L A ++ + + P+
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTV--NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 245 IYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIM 302
+ ++ID G G + +YE +L+ N V+ SL+ N IY+ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 303 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 362
N PD+ N + AG + + M++E+K R D +YS +I
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK----ARRFVPDARSYSILIHGLIK 564
Query: 363 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 422
A ++ + M+ G L+T A++ +I+ G V +A QL EEM G EP
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 423 FNIILHACVEACQYDRAFRFFHSWKGNK------MLGSFGEGYNSNLKQGSIHNATTVPN 476
+ ++ + + D A+ F K + + S +G+ K G I A
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG---KVGRIDEAYL--- 678
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSI 534
IL + TP T+N+LL A + A MK + +PNQ+T+ I
Sbjct: 679 ------ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
LI+ A + M G+KP I+YTT I ++ N +A L++ K+
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
P+ YN +++ S ++ +++++ ++ G
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDA---FSLFEETRRRG 827
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 188/444 (42%), Gaps = 44/444 (9%)
Query: 229 EAYDALKKHLDG---PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
EAY L++ P++ Y I+ G ++ ++E++ + PN+ +N L+
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI 384
Query: 286 NVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 343
++ R L + MQ GL P++ + NI++ C + ++D A M++E+ +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
D T+ ++I A KV M + N++ ++SLI + G E
Sbjct: 445 P----DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML----------- 452
+++++M+ C P+ Q N + +A + ++ F K + +
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 453 -----GSFGEGYN---SNLKQGSIHNA---TTVPNGFSNS-------QILSFTERFPFTP 494
G E Y S +QG + + V +GF Q+L + F P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 495 TTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
T TY +++ A L E K+ + N + +S LID G ++ A IL
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+ + G+ P++ + + + V+++ +AL ++ MK + PN VTY L+ K
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK- 739
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPN 636
V + + +Q+MQK G KP+
Sbjct: 740 --VRKFNKAFVFWQEMQKQGMKPS 761
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/521 (21%), Positives = 198/521 (38%), Gaps = 106/521 (20%)
Query: 205 PHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
P H LF +I F K + SAL D +K ++ +Y ID+ G
Sbjct: 201 PTVH-LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG---------- 249
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
V D+ + ++I N GLKPD +Y ++ C A
Sbjct: 250 ---------------------KVGKVDMAWKF-FHEIEAN-GLKPDEVTYTSMIGVLCKA 286
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
R+D A +M+ +HLE R+ + Y+T+I + A + A + R+ G +
Sbjct: 287 NRLDEAVEMF---EHLEKNRRVPC-TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
+A++ ++ G V++A+++FEEM PN +NI++ A + D AF
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFEL-- 399
Query: 445 SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL- 503
+ S+ A PN T N ++
Sbjct: 400 --------------------RDSMQKAGLFPN-------------------VRTVNIMVD 420
Query: 504 KACGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 562
+ C S A A+ EM +P++IT+ LID G V+ A ++ + M D+ +
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 622
+ I YT+ IK + +Y++M + P+ NT + K G E ++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG---EPEKGR 537
Query: 623 AIYQDMQ-------------------KAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFS 663
A++++++ KAG+ Y L ++E +G + D R Y
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE--QGCVLDTRAYNIVID 595
Query: 664 SIKKSELERPQSLLLEKIAAHLLKRVADILAIDVQGLTKVE 704
K LLE++ + + GL K++
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 162/405 (40%), Gaps = 51/405 (12%)
Query: 281 FNSLMNVNSRDLTYTL--NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK 338
+NSL+ V +R + I M G P + + ++ C A ++ D+ + ++
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 339 HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
+ + Y+T+I F+ M L + M+ G +++LI A
Sbjct: 161 KF----KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 399 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 458
G V+ A+ L +EM + + + +N+ + + + + D A++FFH + N L
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG-LKPDEVT 275
Query: 459 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKAL 516
Y S + G + A + ++ E+ P T YNT++ GS + A +L
Sbjct: 276 YTSMI--GVLCKANRLDEAV---EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 517 INEMKTVG----------------------------------LSPNQITWSILIDICGGT 542
+ + G +PN T++ILID+
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRA 390
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
++ A E+ SM AG+ P+V + +S+ +A ++EEM P+ +T+
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
+L+ K G V + + +Y+ M + + N LI+ +
Sbjct: 451 CSLIDGLGKVGRVDDAYK---VYEKMLDSDCRTNSIVYTSLIKNF 492
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 33/263 (12%)
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ-CFNIILHACVEACQ----YD---- 437
+++SL+ A + Q+ EM +AG P+ C ++L CV+A + YD
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVL-GCVKANKLREGYDVVQM 158
Query: 438 -RAFRFFHSWKG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 495
R F+F ++ ++G+F +++++ + F Q L + PT
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFS----------AVNHSDMMLTLFQQMQELGYE------PT 202
Query: 496 TSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 553
+ TL++ + A +L++EMK+ L + + +++ ID G V+ A +
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
+ G+KPD + YT+ I V ++ +A+ ++E ++ P YNT++ YG
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG---YG 319
Query: 614 SVLEVQQCLAIYQDMQKAGYKPN 636
S + + ++ + + G P+
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPS 342
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 179/390 (45%), Gaps = 40/390 (10%)
Query: 277 NIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMY 334
N + + L+ + SRD + ++Y ++ G K D+ +YN+LL A + + A ++
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA---LAKDEKACQVF 258
Query: 335 KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 394
+++K + D +TY+ +I+ A+ + ++M + G+ LN V +++L+
Sbjct: 259 EDMKKRHC----RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQV 314
Query: 395 CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS 454
A +V++AIQ+F M+ GC PN ++++L+ V Q R K G
Sbjct: 315 LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI 374
Query: 455 FGEGYNSNLKQGSIHNAT-------TVP-NGFSNS------------------QILSFTE 488
+ + K G + A + P G +S ++LS
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 489 RFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 546
T YNT+ A G H L +MK G SP+ T++ILI G V+
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
AI I + + + KPD+I+Y + I ++ + +A ++EM+ ++P+ VTY+TL+
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ +G V+ +++++M G +PN
Sbjct: 555 EC---FGKTERVEMAYSLFEEMLVKGCQPN 581
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 169/388 (43%), Gaps = 17/388 (4%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
A + ++ +KK + Y Y +I G G ++ ++ +++ + +T N+ +N+LM
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 287 V--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
V + + + ++ M G +P+ +Y++LL G++ L + +
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL-------VRLDGVVEIS 366
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
+ + YS +++ + A ++ DM S V ++ S++ + AG +A
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 405 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 464
I++ ++ G +T +N + A + Q F K + G + + N+
Sbjct: 427 IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD---GPSPDIFTYNIL 483
Query: 465 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKT 522
S V + I ER P +YN+L+ G D A EM+
Sbjct: 484 IASFGRVGEVDEAIN---IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 523 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 582
GL+P+ +T+S L++ G TE VE A + + M G +P+++ Y + ++ +
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 583 ALTLYEEMKSCEIHPNWVTYNTLLKARS 610
A+ LY +MK + P+ +TY L + +S
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVLERLQS 628
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 202/465 (43%), Gaps = 50/465 (10%)
Query: 206 HAHILFCNI-ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
H +I NI I FG DL L +KK N + Y+ ++ A D+ K+
Sbjct: 168 HGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFD 224
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
+Y ++ +I+ +N L++ ++D +++ M+ + D +Y I+++
Sbjct: 225 VYCEIRRGGHKLDIFAYNMLLDALAKD-EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRI 283
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G+ D A ++ E+ L L+V Y+T+++V A K+ A++V M G N
Sbjct: 284 GKCDEAVGLFNEM----ITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPN 339
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF- 443
+S L+N G Q ++L + ++ ++ ++ + A R F
Sbjct: 340 EYTYSLLLNLLVAEG---QLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFC 396
Query: 444 HSW----KGNK-----MLGSF-GEGYN-------SNLKQGSIHNATTVPNG-FSN----- 480
W KG + ML S G G S + + + T + N FS
Sbjct: 397 DMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLK 456
Query: 481 --SQILSFTERFPF---TPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWS 533
S I E+ +P TYN L+ + G + A + E++ P+ I+++
Sbjct: 457 QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYN 516
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM--K 591
LI+ G +V+ A K M + G+ PDV+ Y+T ++ +++ + A +L+EEM K
Sbjct: 517 SLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK 576
Query: 592 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
C+ PN VTYN LL K G E + +Y M++ G P+
Sbjct: 577 GCQ--PNIVTYNILLDCLEKNGRTAEA---VDLYSKMKQQGLTPD 616
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+++ + S GK + + + ++ +KK P+++ Y +I + G G+ ++ I+E+
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 269 LLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
L P+I +NSL+N + D+ ++ MQ GL PD+ +Y+ L++ R
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
V++A +++E+ V + ++ TY+ ++ A+ + M+ G+ +++
Sbjct: 563 VEMAYSLFEEM----LVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSI 618
Query: 387 AWSSL 391
++ L
Sbjct: 619 TYTVL 623
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 178/391 (45%), Gaps = 37/391 (9%)
Query: 273 KITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
K+ ++Y F L+ + ++ + ++ + G P++ Y L+ CC G ++ A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+D++ E+ L V + TY+ +I + + ++ M+ GV N ++
Sbjct: 218 KDLFFEMGKLGLVANER----TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
++N G + A Q+F+EM G N +N ++ + + A + K
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS-- 331
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSN----SQILSFTERFP---FTPTTSTYNTLL 503
+G N NL T+ +GF + LS +P+ TYN L+
Sbjct: 332 ------DGINPNLI-----TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 504 KA-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
C D A ++ EM+ G+ P+++T++ILID ++N+E AI++ SM + G+
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 562 PDVIAYTTAIK-VCVESKNFKQALTLYEEM--KSCEIHPNWVTYNTLLKARSKYGSVLEV 618
PDV Y+ I C++ + +A L++ M K+CE PN V YNT++ K GS
Sbjct: 441 PDVHTYSVLIHGFCIKGQ-MNEASRLFKSMVEKNCE--PNEVIYNTMILGYCKEGSSY-- 495
Query: 619 QQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
+ L + ++M++ PN +IE C+
Sbjct: 496 -RALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 167/397 (42%), Gaps = 45/397 (11%)
Query: 287 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 346
V S+ L +++ + M + G P +N LL + + + E K ++
Sbjct: 105 VQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK-----SKV 159
Query: 347 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 406
LDV+++ +IK +A + + + ++ G + N V +++LI+ C G +E+A
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 407 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN---- 462
LF EM G N + + ++++ + + F + + + G F Y N
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED---GVFPNLYTYNCVMN 276
Query: 463 --LKQGSIHNA-------------------TTVPNGFSNSQILSFTERF-------PFTP 494
K G +A T+ G L+ + P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 495 TTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
TYNTL+ CG A +L ++K+ GLSP+ +T++IL+ + GA +++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
K M + GIKP + YT I S N ++A+ L M+ + P+ TY+ L+
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
G + E + +++ M + +PN+ +I +C+
Sbjct: 457 GQMNEASR---LFKSMVEKNCEPNEVIYNTMILGYCK 490
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 169/401 (42%), Gaps = 54/401 (13%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNI 298
PN+ IY +ID C G+ K++ ++ ++ + N + L+N ++ +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
Y+ MQ G+ P++ +YN ++ C GR A ++ E++ + ++ TY+T+I
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER----GVSCNIVTYNTLIG 311
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
A KV M+S G+N N + +++LI+ G + +A+ L ++ G P
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ +NI++ ++G A
Sbjct: 372 SLVTYNILVSGFC--------------------------------RKGDTSGA------- 392
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILI 536
++++ E P+ TY L+ KA L M+ +GL P+ T+S+LI
Sbjct: 393 --AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI-KVCVESKNFKQALTLYEEMKSCEI 595
+ A + KSM + +P+ + Y T I C E +++ AL L +EM+ E+
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR-ALKLLKEMEEKEL 509
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
PN +Y +++ K E ++ + + M +G P+
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAER---LVEKMIDSGIDPS 547
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 31/309 (10%)
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
G++ FT S+++ +++ + ++ + +IN+ + +
Sbjct: 68 GKIHSQFFTSSSLLHYLTESETSKTKFRL---------------YEVIINSYVQSQSLNL 112
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG--SFGEGYNS 461
+I F EM+ G P + CFN +L V + +++ + FF+ K +L SFG
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINE 519
+ G I + + ++ TE F F+P Y TL+ C + AK L E
Sbjct: 173 CCEAGEIEKSFDL--------LIELTE-FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M +GL N+ T+++LI+ + E+ + M + G+ P++ Y + +
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYY 639
K A +++EM+ + N VTYNTL+ + +++ + + M+ G PN
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE---MKLNEANKVVDQMKSDGINPNLIT 340
Query: 640 LEELIEEWC 648
LI+ +C
Sbjct: 341 YNTLIDGFC 349
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 147/343 (42%), Gaps = 51/343 (14%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
E Y+ +++ PN+Y Y +++ G + +++++ + ++ NI +N+L+
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 287 VNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
R+ L + M++ G+ P++ +YN L+ C G++ A + ++LK S G
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK---SRG 368
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
L + TY+ ++ F A K+ +M G+ + V ++ LI+ A + +E+A
Sbjct: 369 -LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 405 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 464
IQL M G P+ +++++H Q + A R F S M+ E
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS-----MVEKNCE------- 475
Query: 465 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL-LKAC--GSDYYHAKALINEMK 521
P YNT+ L C GS Y A L+ EM+
Sbjct: 476 -----------------------------PNEVIYNTMILGYCKEGSSY-RALKLLKEME 505
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 564
L+PN ++ +I++ + A +++ M D+GI P
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 39/234 (16%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ + +I + L A + D +K PN+ Y +ID G CG
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID--GFCG----------- 350
Query: 269 LLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
L L++ + +++ GL P + +YNIL+ C G
Sbjct: 351 --------------------VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
A M KE +E G +K TY+ +I FA + + A++++ M G+ + +
Sbjct: 391 GAAKMVKE---MEERG-IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN-IILHACVEACQYDRAFR 441
S LI+ G + +A +LF+ M+ CEPN +N +IL C E Y RA +
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY-RALK 499
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 182/388 (46%), Gaps = 36/388 (9%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTL 296
P++ Y +++ GLC GD + + + + KI P + ++N++++ N +++ L
Sbjct: 219 PDLVTYGIVVN--GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N++ M N G++P++ +YN L++ C GR A + ++ +E ++ +V T+S +
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IER--KINPNVVTFSAL 332
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I F A K+ +M ++ + +SSLIN C H L ++A +FE M+
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISKD 391
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C PN +N ++ +A + D F ++G+ TT+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN-------------TVTYTTLI 438
Query: 476 NGF------SNSQILSFTERFP--FTPTTSTYNTLLKA-CGSDYYHAKALINE-MKTVGL 525
+GF N+QI+ F + P TY+ LL C + ++ E ++ +
Sbjct: 439 HGFFQARECDNAQIV-FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
P+ T++I+I+ VE ++ S+ G+KP+V+ YTT + ++A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 586 LYEEMKSCEIHPNWVTYNTLLKARSKYG 613
L+ EMK P+ TYNTL++A + G
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 183/433 (42%), Gaps = 49/433 (11%)
Query: 249 IIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLG 306
I DA L G ++ Y P+ + FN+L++ + + + M G
Sbjct: 167 ISDAVSLVGQMVEMGY----------QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+PD+ +Y I++ C G +DLA + K+++ G+++ V Y+TII + K
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ----GKIEPGVVIYNTIIDALCNYKNV 272
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
AL + +M + G+ N V ++SLI + G A +L +M+ PN F+ +
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG---SIHNATTVPNGFSNSQI 483
+ A V+ + A + Y+ +K+ I +++ NGF
Sbjct: 333 IDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 484 LSFTERF-------PFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSI 534
L + P TYNTL+K C + L EM GL N +T++
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
LI + A + K M G+ PD++ Y+ + + + AL ++E ++ +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQD 654
+ P+ TYN +++ K G +V+ ++ + G KPN ++ +C +++
Sbjct: 497 MEPDIYTYNIMIEGMCKAG---KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 655 NREYQAEFSSIKK 667
E A F +K+
Sbjct: 554 --EADALFREMKE 564
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 180/425 (42%), Gaps = 55/425 (12%)
Query: 251 DACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN----VNSRDLTYTLNIYQIMQNLG 306
DA L GD +KSR P+I F+ L++ +N DL +L + MQNLG
Sbjct: 64 DAVNLFGDMVKSRPF----------PSIVEFSKLLSAIAKMNKFDLVISLG--EQMQNLG 111
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+ ++ +Y+IL+ C ++ LA + ++ L + D+ T ++++ F
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG----YEPDIVTLNSLLNGFCHGNRI 167
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
A+ + M G ++ +++LI+ +A+ L + M++ GC+P+ + I+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF-------- 478
++ + D A ++QG I + N
Sbjct: 228 VNGLCKRGDIDLALSLLKK-----------------MEQGKIEPGVVIYNTIIDALCNYK 270
Query: 479 -SNSQILSFTE--RFPFTPTTSTYNTLLKACGSDY---YHAKALINEMKTVGLSPNQITW 532
N + FTE P TYN+L++ C +Y A L+++M ++PN +T+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 533 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
S LID + A ++ M I PD+ Y++ I +A ++E M S
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 593 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVI 652
+ PN VTYNTL+K K V + + ++++M + G N LI + +
Sbjct: 390 KDCFPNVVTYNTLIKGFCK---AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 653 QDNRE 657
DN +
Sbjct: 447 CDNAQ 451
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 149/332 (44%), Gaps = 14/332 (4%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+++ II +++ AL + + PN+ Y ++I G + + + D
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
++ +KI PN+ F++L++ V L +Y M + PD+ +Y+ L+ C+ R
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+D A+ M++ + + +V TY+T+IK F AK +++ +M G+ NTV
Sbjct: 377 LDEAKHMFELMISKDCFP----NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++LI+ A + A +F++M+ G P+ ++I+L + + A F
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA- 505
+ +KM Y N+ + A V +G+ LS P TY T++
Sbjct: 493 QRSKMEPDI---YTYNIMIEGMCKAGKVEDGWDLFCSLSLK---GVKPNVVTYTTMMSGF 546
Query: 506 CGSDYY-HAKALINEMKTVGLSPNQITWSILI 536
C A AL EMK G P+ T++ LI
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 155/370 (41%), Gaps = 89/370 (24%)
Query: 182 SDMIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGP 241
SDMI+R + NP + + F +I F K L+ A + YD + K P
Sbjct: 315 SDMIERKI---NPNV------------VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQI 301
+++ Y ++I+ + ++++++E ++++ PN+
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT--------------------- 398
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
YN L+K C A RVD ++++E+ VG + TY+T+I F
Sbjct: 399 ------------YNTLIKGFCKAKRVDEGMELFREMSQRGLVG----NTVTYTTLIHGFF 442
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
A+ A V M S GV + + +S L++ + G VE A+ +FE + + EP+
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 422 CFNIILHACVEACQYDRAFRFFH--SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF- 478
+NI++ +A + + + F S KG K ++ TT+ +GF
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK---------------PNVVTYTTMMSGFC 547
Query: 479 -------SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMK-------- 521
+++ E P P + TYNTL++A D A + LI EM+
Sbjct: 548 RKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 606
Query: 522 -TVGLSPNQI 530
T+GL N +
Sbjct: 607 STIGLVTNML 616
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 189/415 (45%), Gaps = 45/415 (10%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
Y D+ +I N+Y FN ++NV ++ L IM+ G+KP + +YN L++
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
+ GR++ A+ + E+K S G + D+ TY+ I+ + A +V +M+ G+
Sbjct: 272 LRGRIEGARLIISEMK---SKG-FQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLV 324
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC-----VEACQ-Y 436
++V+++ LI C++ G +E A +EM+ G P +N ++H +EA +
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 437 DRAFR----FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV----PNGFSNSQILSFTE 488
R R S N ++ + + ++ K ++H+ P F+ + ++
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAK-KAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 489 RFPFT----------------PTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQI 530
R T P NTL+ C + A +L+ EM + ++P+ +
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 531 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 590
T++ L+ G E A E++ M GIKPD I+Y T I + + K A + +EM
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 591 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
S +P +TYN LLK SK E + + ++M+ G PND +IE
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQ---EGELAEELLREMKSEGIVPNDSSFCSVIE 615
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 160/366 (43%), Gaps = 42/366 (11%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQ 300
P + Y ++ L G +R I ++ ++ P++ +N +++ + + + +
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS-EVLR 316
Query: 301 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK-V 359
M+ +GL PD SYNIL++ C G +++A E+ V +TY+T+I +
Sbjct: 317 EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF----YTYNTLIHGL 372
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
F + K+ + ++ ++R G+ L++V ++ LIN G ++A L +EM+ G +P
Sbjct: 373 FMENKIEAAEILIR-EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWKGNKM----------------LGSFGEGYN--S 461
+ +++ + A F G M +G+ ++
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491
Query: 462 NLKQGSIHNATTVPNGFSNS-----------QILSFTERFPFTPTTSTYNTLLKACG--S 508
+ SI+ N +++ +R P +YNTL+
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 509 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG--AIEILKSMGDAGIKPDVIA 566
D HA + +EM ++G +P +T++ L+ G ++N EG A E+L+ M GI P+ +
Sbjct: 552 DTKHAFMVRDEMLSLGFNPTLLTYNALLK--GLSKNQEGELAEELLREMKSEGIVPNDSS 609
Query: 567 YTTAIK 572
+ + I+
Sbjct: 610 FCSVIE 615
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
+I+ + + D A +D + P + Y ++I ++ ++E ++ +
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 274 ITPNIYVFNSLMN----VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
+ P++ + N+LM+ + + D ++L + M + + PD +YN L++ C G+ +
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSL--LKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A+++ E+K +K D +Y+T+I ++ + A V+ +M S G N + ++
Sbjct: 521 ARELMGEMKR----RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
+L+ + E A +L EM G PN F ++ A
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 179/380 (47%), Gaps = 20/380 (5%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTL 296
P+++ Y +++ GLC GD + + + + KI ++ ++ ++++ N +++ L
Sbjct: 218 PDLFTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N++ M N G++P++ +YN L++ C GR A + ++ ++ +V T+S +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE----RKINPNVVTFSAL 331
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I F A K+ +M ++ + +SSLIN C H L ++A +FE M+
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISKD 390
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C PN +N ++ +A + + F ++G+ YN+ L QG
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN-TVTYNT-LIQGLFQAGDCDM 448
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWS 533
+++S + P P TY+ LL KAL+ ++ + P+ T++
Sbjct: 449 AQKIFKKMVS--DGVP--PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
I+I+ VE ++ S+ G+KP+VI YTT I ++A L+ EMK
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 594 EIHPNWVTYNTLLKARSKYG 613
PN TYNTL++AR + G
Sbjct: 565 GTLPNSGTYNTLIRARLRDG 584
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 179/406 (44%), Gaps = 39/406 (9%)
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
PN FN+L++ + + + M G +PD+ +Y ++ C G +DLA +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
K+++ G+++ DV Y+TII + K AL + +M + G+ N V ++SLI
Sbjct: 243 LKKMEK----GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 394 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG 453
+ G A +L +M+ PN F+ ++ A V+ + A +
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL----------- 347
Query: 454 SFGEGYNSNLKQG---SIHNATTVPNGFS-NSQILSFTERFPFT------PTTSTYNTLL 503
Y+ +K+ I +++ NGF + ++ F P TYNTL+
Sbjct: 348 -----YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 504 KA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
K C + L EM GL N +T++ LI + + A +I K M G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
PD+I Y+ + + ++AL ++E ++ ++ P+ TYN +++ K G +V+
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG---KVEDG 519
Query: 622 LAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKK 667
++ + G KPN +I +C +++ E A F +K+
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE--EADALFREMKE 563
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 180/409 (44%), Gaps = 47/409 (11%)
Query: 251 DACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN----VNSRDLTYTLNIYQIMQNLG 306
DA L G+ ++SR + P+I FN L++ +N DL +L + MQNL
Sbjct: 63 DAVDLFGEMVQSRPL----------PSIVEFNKLLSAIAKMNKFDLVISLG--ERMQNLR 110
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+ D+ SYNIL+ C ++ LA + ++ L + D+ T S+++ + K
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG----YEPDIVTLSSLLNGYCHGKRI 166
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
A+ + M NTV +++LI+ +A+ L + M+ GC+P+ + +
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS- 485
++ + D A + K+ + + TT+ + N + ++
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKI-------------EADVVIYTTIIDALCNYKNVND 273
Query: 486 ----FTE--RFPFTPTTSTYNTLLKACGSDY---YHAKALINEMKTVGLSPNQITWSILI 536
FTE P TYN+L++ C +Y A L+++M ++PN +T+S LI
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
D + A ++ M I PD+ Y++ I +A ++E M S +
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 597 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
PN VTYNTL+K K V++ + ++++M + G N LI+
Sbjct: 393 PNVVTYNTLIKGFCK---AKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 14/369 (3%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+++ II +++ AL + + PN+ Y ++I G + + + D
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
++ +KI PN+ F++L++ V L +Y M + PD+ +Y+ L+ C+ R
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+D A+ M++ + + +V TY+T+IK F AK + +++ +M G+ NTV
Sbjct: 376 LDEAKHMFELMISKDCFP----NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++LI AG + A ++F++M+ G P+ ++I+L + + ++A F
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA- 505
+ +KM Y N+ + A V +G+ LS P Y T++
Sbjct: 492 QKSKMEPDI---YTYNIMIEGMCKAGKVEDGWDLFCSLSLK---GVKPNVIIYTTMISGF 545
Query: 506 CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 564
C A AL EMK G PN T++ LI + + E++K M G D
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
Query: 565 IAYTTAIKV 573
+ I +
Sbjct: 606 STISMVINM 614
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 148/345 (42%), Gaps = 56/345 (16%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P + +N LL A + DL + + +++L R+ D+++Y+ +I F +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNL----RISYDLYSYNILINCFCRRSQLPL 133
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
AL V M G + V SSL+N H + +A+ L ++M + +PNT FN ++H
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
G F +HN S+ ++ +
Sbjct: 194 ------------------------GLF------------LHNKA--------SEAVALID 209
Query: 489 RF---PFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE 543
R P TY T++ C D A +L+ +M+ + + + ++ +ID +
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
NV A+ + M + GI+P+V+ Y + I+ + A L +M +I+PN VT++
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
L+ A K G ++E ++ +Y +M K P+ + LI +C
Sbjct: 330 ALIDAFVKEGKLVEAEK---LYDEMIKRSIDPDIFTYSSLINGFC 371
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 180/436 (41%), Gaps = 72/436 (16%)
Query: 266 YEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
+E ++ + P++ N ++ V +SR + +Y+ M G+ P + ++N +L +C
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
AG ++ ++ E+K ++ TY+ +I F+ + A + DMR +G +
Sbjct: 251 AGDLERVDKIWLEMKRRN----IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAV 306
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+++ LI GL + A + +EML AG P T +NI + A + + D A
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 444 HSW------------KGNKMLGSFGEG--YNSNLKQGSIHNA----TTVPNGFSNSQILS 485
S G +G F E +L+ G IH + T+ +G S L
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 486 FTERFPFTPTTS-------TYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWS--- 533
+R TT TY TL+K + A + +EM G+ P+ ++
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 534 ---------------------------------ILIDICGGTENVEGAIEILKSMGDAGI 560
+ ID N+ AIE + + G+
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
PD + YTT I+ +E+ FK A LY+EM ++P+ +TY L+ +K G ++Q
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG---RLEQ 603
Query: 621 CLAIYQDMQKAGYKPN 636
+M+K G +PN
Sbjct: 604 AFQYSTEMKKRGVRPN 619
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/505 (20%), Positives = 196/505 (38%), Gaps = 97/505 (19%)
Query: 212 CNIISEFGKRRDLISALEA-YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
CNI+ + + +++ A Y+ + +H P + + ++D+C GD + I+ ++
Sbjct: 206 CNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMK 265
Query: 271 NQKITPNIYVFNSLMNVNSRD--------------------LTYTLN------------- 297
+ I + +N L+N S++ Y+ N
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFD 325
Query: 298 ----IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM-----------YKELKH--- 339
+ M N G+ P ++YNI + A C GR+D A+++ Y L H
Sbjct: 326 DAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYI 385
Query: 340 -----LES--------VGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+E+ G + + TY+T+I ++ + A ++K +M + + + +
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVI 445
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++L+ G + A ++++EML G +P+ + + D+AFR
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 505
Query: 447 KGNKMLGSFGEGYNSNLK--------------QGSIHNATTVPNGFSNSQIL-SFTERFP 491
YN + Q I VP+ + + ++ + E
Sbjct: 506 VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Query: 492 FTPTTSTYNTLLKACGSD---------YYHAKA--------LINEMKTVGLSPNQITWSI 534
F + Y+ +L+ Y HAKA EMK G+ PN +T +
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
L+ N++ A L M + GI P+ +YT I + + +++ + LY+EM E
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQ 619
I P+ T+ L K K EV+
Sbjct: 686 IEPDGYTHRALFKHLEKDHESREVE 710
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 400 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFG 456
+ E+ + FE+M+ G P+ + NI+L ++ ++A + + + ++ +F
Sbjct: 183 MAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFN 242
Query: 457 EGYNSNLKQGSIHNATTV-------------------PNGFSNSQILSFTERF------- 490
+S K G + + NGFS + + RF
Sbjct: 243 TMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRS 302
Query: 491 PFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGA 548
F T ++N L++ C + A + +EM G+ P T++I I ++ A
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 362
Query: 549 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
E+L SM PDV++Y T + ++ F +A L++++++ +IHP+ VTYNTL+
Sbjct: 363 RELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Query: 609 RSKYGSVLEVQQ 620
+ G++ Q+
Sbjct: 419 LCESGNLEGAQR 430
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 524 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 583
G P+ +I++ + + + A + ++M + GI P VI + T + C ++ + ++
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 584 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEEL 643
++ EMK I + VTYN L+ SK G + E ++ + DM+++G+ Y L
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR---FHGDMRRSGFAVTPYSFNPL 314
Query: 644 IEEWC-EGVIQD 654
IE +C +G+ D
Sbjct: 315 IEGYCKQGLFDD 326
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 192/460 (41%), Gaps = 69/460 (15%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGD--FMKSRYIYE 267
LF ++IS + + A+E + +K+ P++ IY ++D L G+ +Y
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDT--LLGENRIQMIYMVYR 170
Query: 268 DLLNQKITPNIYVFNSLMNV----NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
D+ PN++ +N L+ N D L + M N G PD SY ++ + C
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVE--MSNKGCCPDAVSYTTVISSMCE 228
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
G V +++ + + + SV Y+ +I ++ A ++ +M G++
Sbjct: 229 VGLVKEGRELAERFEPVVSV---------YNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
N +++S+LIN ++G +E A +ML GC PN + ++ C F
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF---LRGTTFDAL 336
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
W N+M+ FG P YNTL+
Sbjct: 337 DLW--NQMIRGFG-----------------------------------LQPNVVAYNTLV 359
Query: 504 KACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
+ S + A ++ + M+ +G SPN T+ LI+ +++GA+ I M +G
Sbjct: 360 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 419
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
P+V+ YT ++ FK+A +L E M P+ T+N +K G + ++
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK- 478
Query: 622 LAIYQDM-QKAGYKPNDYYLEELIEEWCEGVIQDNREYQA 660
+++ M Q+ PN EL+ +G+ + NR +A
Sbjct: 479 --VFRQMEQQHRCPPNIVTYNELL----DGLAKANRIEEA 512
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 190/432 (43%), Gaps = 20/432 (4%)
Query: 182 SDMIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGP 241
S M + ++ +LA R+ ++ ++ +I+ K D A E + + P
Sbjct: 224 SSMCEVGLVKEGRELAERFEPVVS----VYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM-NVNSRDLTY-TLNIY 299
N+ Y +I+ G + +L + PNIY +SL+ R T+ L+++
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW 339
Query: 300 -QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
Q+++ GL+P++ +YN L++ C G + A ++ H+E +G ++ TY ++I
Sbjct: 340 NQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS---HMEEIG-CSPNIRTYGSLIN 395
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
FA A+ + + M ++G N V +++++ A ++A L E M C P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ FN + +A + D A + F + YN L + N G
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLK-ACGSDYYH-AKALINEMKTVGLSPNQITWSILI 536
+ + E ++STYNTLL +C + A L+ +M G SP++IT +++I
Sbjct: 516 TREIFMRGVEW-----SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMII 570
Query: 537 DICGGTENVEGAIEILK--SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
E A ++L S G +PDVI+YT I S + + L E M S
Sbjct: 571 LAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAG 630
Query: 595 IHPNWVTYNTLL 606
I P+ T++ L+
Sbjct: 631 IVPSIATWSVLI 642
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 152/327 (46%), Gaps = 21/327 (6%)
Query: 313 SYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 372
++ ++++ + G+VD Q + +++K L+ D+F ++I V+ L + A+++
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMK-LQGF-HCSEDLFI--SVISVYRQVGLAERAVEM 133
Query: 373 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
+ ++ G + + ++ +++ ++ ++ +M G EPN +N++L A +
Sbjct: 134 FYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 433 ACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 492
+ D A + NK G + + S+ V G ER F
Sbjct: 194 NNKVDGAKKLLVEMS-NK--GCCPDAVSYTTVISSMCEVGLVKEG------RELAER--F 242
Query: 493 TPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
P S YN L+ C DY A L+ EM G+SPN I++S LI++ + +E A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTYNTLLKAR 609
L M G P++ ++ +K C AL L+ +M + + PN V YNTL++
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+G++++ ++++ M++ G PN
Sbjct: 363 CSHGNIVKA---VSVFSHMEEIGCSPN 386
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 6/177 (3%)
Query: 492 FTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
F T T+ +++ D + L+ +MK G ++ + +I + E A+
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
E+ + + G P V Y + + + +Y +MK PN TYN LLKA
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQAEFSSI 665
K V ++ L +M G P+ +I CE G++++ RE F +
Sbjct: 192 CKNNKVDGAKKLLV---EMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV 245
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 193/424 (45%), Gaps = 56/424 (13%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
AL D + ++ P+ Y +++ G+ + ++ + + I ++ ++ +++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 287 VNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
+D ++ L+++ M+ G+K D+ +Y+ L+ C G+ D M +E+ +G
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-----IG 308
Query: 345 R-LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
R + DV T+S +I VF A ++ ++M + G+ +T+ ++SLI+ + +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 463
A Q+F+ M+ GCEP+ ++I++++ +A + D R F
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR------------------- 409
Query: 464 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL-LKACGSDYYH-AKALINEMK 521
I + +PN T TYNTL L C S + AK L EM
Sbjct: 410 ---EISSKGLIPN-------------------TITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 522 TVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 580
+ G+ P+ +T+ IL+D +C E + A+EI + M + + + Y I +
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGE-LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 581 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYL 640
A +L+ + + P+ VTYN ++ K GS+ E +++ M++ G P+D+
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM---LFRKMKEDGCTPDDFTY 563
Query: 641 EELI 644
LI
Sbjct: 564 NILI 567
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 148/312 (47%), Gaps = 34/312 (10%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNI 298
P++ + A+ID G ++++ +Y +++ + I P+ +NSL++ ++ L +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ +M + G +PD+ +Y+IL+ + C A RVD +++E+ S L + TY+T++
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI----SSKGLIPNTITYNTLVL 428
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
F + A ++ +M S GV + V + L++ G + +A+++FE+M +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSW--KG--------NKMLGSFGEGYNSNLKQGSI 468
+NII+H A + D A+ F S KG N M+G K+GS+
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL-------CKKGSL 541
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLS 526
A + + TP TYN L++A GS + LI EMK G S
Sbjct: 542 SEA---------DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 592
Query: 527 PNQITWSILIDI 538
+ T ++ID+
Sbjct: 593 ADSSTIKMVIDM 604
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 163/396 (41%), Gaps = 50/396 (12%)
Query: 274 ITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA- 330
I ++Y ++N R L + ++ LG +PD +++ L+ C+ GRV A
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 331 --QDMYKELKHLESV-------------GRL---------------KLDVFTYSTIIKVF 360
D E+K + GR+ + D TY ++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 361 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 420
+ +AL + M + + V +S +I++ G + A+ LF EM + G + +
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 421 QCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNATTVPNG 477
++ ++ ++D + G ++ +F + +K+G + A + N
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSIL 535
I P T TYN+L+ C + H A + + M + G P+ +T+SIL
Sbjct: 341 MITRGI---------APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
I+ + V+ + + + + G+ P+ I Y T + +S A L++EM S +
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
P+ VTY LL G E+ + L I++ MQK+
Sbjct: 452 PPSVVTYGILLDGLCDNG---ELNKALEIFEKMQKS 484
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 164/404 (40%), Gaps = 51/404 (12%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACC 322
++E ++ + P FN L + +R Y L + M+ G++ DM + I++ C
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
++ A + L +G + D T+ST++ F A+ + M
Sbjct: 117 RKKKLLFA---FSVLGRAWKLG-YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ V S+LIN G V +A+ L + M+ G +P+ + +L+ ++ A
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
F + N+K + + + ++L
Sbjct: 233 FRKME------------ERNIKASVVQYSIVI-------------------------DSL 255
Query: 503 LKACGSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIK 561
K D A +L NEM+ G+ + +T+S LI +C + +GA ++L+ M I
Sbjct: 256 CKDGSFD--DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA-KMLREMIGRNII 312
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
PDV+ ++ I V V+ +A LY EM + I P+ +TYN+L+ K + E Q
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ- 371
Query: 622 LAIYQDMQKAGYKPNDYYLEELIEEWCEGV-IQDNREYQAEFSS 664
++ M G +P+ LI +C+ + D E SS
Sbjct: 372 --MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 11/250 (4%)
Query: 401 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 460
V AI LFE M+ + P FN + A QYD F KG ++ G + Y
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGF---CKGMELNGIEHDMYT 107
Query: 461 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-GSDYYHAKALIN 518
+ + FS +L + + P T T++TL+ C A AL++
Sbjct: 108 MTIMINCYCRKKKLLFAFS---VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 519 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
M + P+ +T S LI+ V A+ ++ M + G +PD + Y + +S
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
N AL L+ +M+ I + V Y+ ++ + K GS L+++ +M+ G K +
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS---FDDALSLFNEMEMKGIKADVV 281
Query: 639 YLEELIEEWC 648
LI C
Sbjct: 282 TYSSLIGGLC 291
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 202 SLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDF 259
L+P+ I + ++ F + L +A E + + P++ Y ++D GLC G+
Sbjct: 415 GLIPNT-ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD--GLCDNGEL 471
Query: 260 MKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNIL 317
K+ I+E + ++T I ++N +++ N+ + +++ + + G+KPD+ +YN++
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 318 LKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
+ C G + A +++++K D FTY+ +I+ ++++ +M+
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKE----DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 378 SAGVNLNTVAWSSLIN 393
G + ++ +I+
Sbjct: 588 VCGFSADSSTIKMVID 603
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 194/447 (43%), Gaps = 44/447 (9%)
Query: 234 LKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--D 291
++KH P++Y+Y AII+ + K+ ++ +L ++ N + +S++ + +
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 292 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDV 350
+ ++++ + + D YN+ A G+V+ A ++++E+ G+ + DV
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM-----TGKGIAPDV 431
Query: 351 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 410
Y+T+I A + +M G + V ++ L A GL ++A + +
Sbjct: 432 INYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM 491
Query: 411 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 470
M G +P N+++ ++A + D+A F+ S L+ S N
Sbjct: 492 MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES-----------------LEHKSREN 534
Query: 471 ATTVPNGFSNSQILSFT-ERF---PFTPTTSTYNTLLKA-CGSDYYHAKA--LINEMKTV 523
++ GF + L ERF F S Y TL + C Y +KA L++ M +
Sbjct: 535 DASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL 594
Query: 524 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 583
G+ P + + LI NV A E + + I PD+ YT I KQA
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 584 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEEL 643
L+E+MK ++ P+ VTY+ LL + + L + ++M+ P+ Y +
Sbjct: 655 YALFEDMKRRDVKPDVVTYSVLLNSDPE----------LDMKREMEAFDVIPDVVYYTIM 704
Query: 644 IEEWCEGVIQDNREYQAEFSSIKKSEL 670
I +C + D ++ A F +K+ E+
Sbjct: 705 INRYCH--LNDLKKVYALFKDMKRREI 729
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/471 (19%), Positives = 183/471 (38%), Gaps = 63/471 (13%)
Query: 218 FGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPN 277
GK + A+E + + P++ Y +I C L G + + ++ TP+
Sbjct: 406 LGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPD 465
Query: 278 IYVFNSL-----MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
I ++N L N +++ TL ++M+N G+KP ++N++++ AG +D A+
Sbjct: 466 IVIYNVLAGGLATNGLAQEAFETL---KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEA 522
Query: 333 MYKELKH----------------------LESVGRLKLDV---FTYSTIIKVFADAKLWQ 367
Y+ L+H E RL+ + ++ + A+
Sbjct: 523 FYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYIS 582
Query: 368 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 427
A + M GV + LI A V +A + FE ++ P+ + I++
Sbjct: 583 KAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMI 642
Query: 428 HACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLK---QGSIHNATTVPNGFSNS 481
+ + +A+ F K + + ++ NS+ + + + +P+ +
Sbjct: 643 NTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYT 702
Query: 482 ----------------QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGL 525
+ +R P TY LLK + L EMK +
Sbjct: 703 IMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-----KPERNLSREMKAFDV 757
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
P+ +++LID ++ A I M ++G+ PD YT I C + K+A
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 586 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+++ M + P+ V Y L+ + G VL + + + ++M + G KP
Sbjct: 818 IFDRMIESGVKPDVVPYTALIAGCCRNGFVL---KAVKLVKEMLEKGIKPT 865
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 26/312 (8%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M LG++P+ + Y L+ A C V A++ ++ L ++ D+FTY+ +I +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL----VTKKIVPDLFTYTIMINTYC 646
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ A + DM+ V + V +S L+N+ + + + EM P+
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVV 699
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
+ I+++ + + F K +++ Y LK N + F
Sbjct: 700 YYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT-YTVLLKNKPERNLSREMKAFD-- 756
Query: 482 QILSFTERFPFTPTTSTYNTLLK-ACG-SDYYHAKALINEMKTVGLSPNQITWSILIDIC 539
P Y L+ C D AK + ++M G+ P+ ++ LI C
Sbjct: 757 ----------VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
++ A I M ++G+KPDV+ YT I C + +A+ L +EM I P
Sbjct: 807 CKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTK 866
Query: 600 VTYNTLLKARSK 611
+ + + A+ K
Sbjct: 867 ASLSAVHYAKLK 878
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 223 DLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFN 282
D+ +EA+D + P++ Y +I+ D K +++D+ ++I P++ +
Sbjct: 684 DMKREMEAFDVI------PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYT 737
Query: 283 SLM-NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
L+ N R+L+ + M+ +KPD+ Y +L+ C G + A+ ++ ++ +E
Sbjct: 738 VLLKNKPERNLS------REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQM--IE 789
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
S + D Y+ +I + A + M +GV + V +++LI C G V
Sbjct: 790 S--GVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFV 847
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 433
+A++L +EML G +P + + +A ++A
Sbjct: 848 LKAVKLVKEMLEKGIKPTKASLSAVHYAKLKA 879
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 110/249 (44%), Gaps = 37/249 (14%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDL 269
++ +I + + ++ A E ++ L P+++ Y +I+ + ++ ++ED+
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661
Query: 270 LNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
+ + P++ ++ L+N + L++ + M+ + PD+ Y I++ C +
Sbjct: 662 KRRDVKPDVVTYSVLLNSDPE-----LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKK 716
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL---------------------WQM 368
++K++K E V DV TY+ ++K + L WQ
Sbjct: 717 VYALFKDMKRREIVP----DVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQC 772
Query: 369 -------ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
A ++ M +GV+ + +++LI C G +++A +F+ M+ +G +P+
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 422 CFNIILHAC 430
+ ++ C
Sbjct: 833 PYTALIAGC 841
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 179/435 (41%), Gaps = 57/435 (13%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
+RY + + I F +I+ +GK + A L K PN+ Y A++++ G G
Sbjct: 129 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 188
Query: 258 DFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIM---QNLGLKPDMT 312
+ I+ + + P+ + ++ V +++ + + LKPD
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 313 SYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQMALK 371
Y++++ AG + A+ ++ + VG+ + TY++++ ++ K
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSM-----VGKGVPQSTVTYNSLMSFETS---YKEVSK 300
Query: 372 VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 431
+ M+ + + + V+++ LI A A E+A+ +FEEML AG P + +NI+L A
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 432 EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 491
+ ++A F S + +++
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIF--------------------------------------- 381
Query: 492 FTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
P +Y T+L A SD A+ +K G PN +T+ LI +VE +
Sbjct: 382 --PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
E+ + M +GIK + TT + KNF AL Y+EM+SC + P+ N LL
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLA 499
Query: 610 SKYGSVLEVQQCLAI 624
S + E ++ I
Sbjct: 500 STQDELEEAKELTGI 514
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 120/266 (45%), Gaps = 24/266 (9%)
Query: 148 ECRRMVMSGHIAEAVELMEV----LARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASL 203
E R V S + + V V L F+ +E+ + D ++R + + V YA L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD---VVSYALL 320
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
I +G+ R AL ++ + P Y ++DA + G +++
Sbjct: 321 -----------IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 264 YIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+++ + +I P+++ + ++++ VN+ D+ ++ ++ G +P++ +Y L+K
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
A V+ ++Y++++ + +K + +TI+ K + AL +M S GV
Sbjct: 430 AKANDVEKMMEVYEKMR----LSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 485
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQL 407
+ A + L++ + +E+A +L
Sbjct: 486 PPDQKAKNVLLSLASTQDELEEAKEL 511
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 179/435 (41%), Gaps = 57/435 (13%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
+RY + + I F +I+ +GK + A L K PN+ Y A++++ G G
Sbjct: 136 LRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGG 195
Query: 258 DFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIM---QNLGLKPDMT 312
+ I+ + + P+ + ++ V +++ + + LKPD
Sbjct: 196 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 255
Query: 313 SYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQMALK 371
Y++++ AG + A+ ++ + VG+ + TY++++ ++ K
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFSSM-----VGKGVPQSTVTYNSLMSFETS---YKEVSK 307
Query: 372 VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 431
+ M+ + + + V+++ LI A A E+A+ +FEEML AG P + +NI+L A
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 432 EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 491
+ ++A F S + +++
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIF--------------------------------------- 388
Query: 492 FTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
P +Y T+L A SD A+ +K G PN +T+ LI +VE +
Sbjct: 389 --PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
E+ + M +GIK + TT + KNF AL Y+EM+SC + P+ N LL
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLA 506
Query: 610 SKYGSVLEVQQCLAI 624
S + E ++ I
Sbjct: 507 STQDELEEAKELTGI 521
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 120/266 (45%), Gaps = 24/266 (9%)
Query: 148 ECRRMVMSGHIAEAVELMEV----LARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASL 203
E R V S + + V V L F+ +E+ + D ++R + + V YA L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD---VVSYALL 327
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
I +G+ R AL ++ + P Y ++DA + G +++
Sbjct: 328 -----------IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 264 YIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+++ + +I P+++ + ++++ VN+ D+ ++ ++ G +P++ +Y L+K
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
A V+ ++Y++++ + +K + +TI+ K + AL +M S GV
Sbjct: 437 AKANDVEKMMEVYEKMR----LSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 492
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQL 407
+ A + L++ + +E+A +L
Sbjct: 493 PPDQKAKNVLLSLASTQDELEEAKEL 518
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 174/388 (44%), Gaps = 55/388 (14%)
Query: 276 PNIYVFNSLMN---VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
P+ + F +L++ ++++ + Q++Q G +PD+ +Y ++ C G +DLA
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 333 MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
+ K+++ G+++ DV Y+TII K AL + +M + G+ + +SSLI
Sbjct: 245 LLKKMEK----GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
+ + G A +L +M+ PN F+ ++ A V
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV--------------------- 339
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY 511
K+G + A + + I P TY++L+ C D
Sbjct: 340 -----------KEGKLVEAEKLYDEMIKRSI---------DPDIFTYSSLINGFCMHDRL 379
Query: 512 -HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 570
AK + M + PN +T+S LI + VE +E+ + M G+ + + YTT
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 571 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
I ++++ A ++++M S +HPN +TYN LL K G ++ + + +++ +Q+
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG---KLAKAMVVFEYLQR 496
Query: 631 AGYKPNDYYLEELIEEWCE-GVIQDNRE 657
+ +P+ Y +IE C+ G ++D E
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 182/400 (45%), Gaps = 23/400 (5%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
P++ Y +++ GLC GD + + + + KI ++ ++N++++ + + L
Sbjct: 221 PDLVTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N++ M N G++PD+ +Y+ L+ C GR A + ++ ++ +V T+S +
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER----KINPNVVTFSAL 334
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I F A K+ +M ++ + +SSLIN C H L ++A +FE M+
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISKD 393
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C PN ++ ++ +A + + F ++G N+ IH
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG------NTVTYTTLIHGFFQAR 447
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWS 533
+ + + P TYN LL + AKA++ ++ + P+ T++
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
I+I+ VE E+ ++ G+ P+VIAY T I + ++A +L ++MK
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 633
PN TYNTL++AR + G + + + ++M+ G+
Sbjct: 568 GPLPNSGTYNTLIRARLRDG---DREASAELIKEMRSCGF 604
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 169/397 (42%), Gaps = 55/397 (13%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC------------ 256
+ + +++ KR D+ AL ++K ++ IY IID GLC
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID--GLCKYKHMDDALNLF 281
Query: 257 -------------------------GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNS 289
G + + + D++ +KI PN+ F++L++ V
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 290 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 349
L +Y M + PD+ +Y+ L+ C+ R+D A+ M++ + + +
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP----N 397
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 409
V TYST+IK F AK + +++ +M G+ NTV +++LI+ A + A +F+
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 410 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 469
+M+ G PN +NI+L + + +A F + + M Y N+ +
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI---YTYNIMIEGMC 514
Query: 470 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C--GSDYYHAKALINEMKTVGLS 526
A V +G+ LS +P YNT++ C GS A +L+ +MK G
Sbjct: 515 KAGKVEDGWELFCNLSLK---GVSPNVIAYNTMISGFCRKGSK-EEADSLLKKMKEDGPL 570
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
PN T++ LI + E + E++K M G D
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 181/419 (43%), Gaps = 43/419 (10%)
Query: 251 DACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLK 308
DA L GD +KSR P+I FN L++ ++ +++ + MQ LG+
Sbjct: 66 DAVDLFGDMVKSRPF----------PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
D+ +Y+I + C ++ LA + ++ L + D+ T S+++ + +K
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG----YEPDIVTLSSLLNGYCHSKRISD 171
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
A+ + M G +T +++LI+ +A+ L ++M+ GC+P+ + +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS--- 485
+ D A + K+ + + T+ +G + +
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKI-------------EADVVIYNTIIDGLCKYKHMDDAL 278
Query: 486 --FTE--RFPFTPTTSTYNTLLKACGSDY---YHAKALINEMKTVGLSPNQITWSILIDI 538
FTE P TY++L+ +C +Y A L+++M ++PN +T+S LID
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLI-SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 598
+ A ++ M I PD+ Y++ I +A ++E M S + PN
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 599 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNRE 657
VTY+TL+K K V++ + ++++M + G N LI + + DN +
Sbjct: 398 VVTYSTLIKGFCK---AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 48/343 (13%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P + +YN++L+ A + D+A ++ E++ L D +TYST+I F ++
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA----LAPDRYTYSTLITSFGKEGMFDS 208
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
AL M V+ + V +S+LI +AI +F + +G P+ +N +++
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS-FT 487
+A + FR + L ++ A +PN S S +LS +
Sbjct: 269 VYGKA----KLFR------------------EARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
Query: 488 ERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG 547
E F S + EMK V + + T +I+ID+ G + V+
Sbjct: 307 ENHKFLEALSVFA------------------EMKEVNCALDLTTCNIMIDVYGQLDMVKE 348
Query: 548 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 607
A + S+ I+P+V++Y T ++V E++ F +A+ L+ M+ +I N VTYNT++K
Sbjct: 349 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 608 ARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
YG +E ++ + Q+MQ G +PN +I W +
Sbjct: 409 I---YGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 161/355 (45%), Gaps = 34/355 (9%)
Query: 273 KITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
K TP+++ +N ++ + ++ ++ M+ L PD +Y+ L+ + G D A
Sbjct: 150 KYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSA 209
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
++++ R+ D+ YS +I++ + A+ + ++ +G+ + VA++S
Sbjct: 210 LSWLQKMEQ----DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNS 265
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG-- 448
+IN A L +A L +EM AG PNT ++ +L VE ++ A F K
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 449 --------NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
N M+ +G+ +K+ ++ + P +YN
Sbjct: 326 CALDLTTCNIMIDVYGQL--DMVKEA--------------DRLFWSLRKMDIEPNVVSYN 369
Query: 501 TLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 558
T+L+ G +A L M+ + N +T++ +I I G T E A +++ M
Sbjct: 370 TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Query: 559 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
GI+P+ I Y+T I + ++ +A TL+++++S + + V Y T++ A + G
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 484
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 155/345 (44%), Gaps = 49/345 (14%)
Query: 231 YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR 290
+D +++ P+ Y Y +I + G G F + + + +++ ++ ++++L+ ++ R
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 237
Query: 291 --DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 348
D + ++I+ ++ G+ PD+ +YN ++ V G+ L ++ +K + G L
Sbjct: 238 LCDYSKAISIFSRLKRSGITPDLVAYNSMIN---VYGKAKLFREARLLIKEMNEAGVLP- 293
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
+ +YST++ V+ + + AL V +M+ L+ + +I+ +V++A +LF
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
+ EPN +N IL EA FGE +I
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEA-------------------ELFGE---------AI 385
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLS 526
H + +R TYNT++K G H KA L+ EM++ G+
Sbjct: 386 H-------------LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
PN IT+S +I I G ++ A + + + +G++ D + Y T I
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 193/470 (41%), Gaps = 84/470 (17%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
+R +L P + + +I+ FGK SAL +++ ++ +Y +I+
Sbjct: 181 MRQRALAPDRYT-YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC 239
Query: 258 DFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLN--IYQIMQNLGLKPDMTSYN 315
D+ K+ I+ L ITP++ +NS++NV + + + + M G+ P+ SY+
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 316 IL----------LKACCVAGR-------VDLAQ-----DMYKELKHLESVGRL-----KL 348
L L+A V +DL D+Y +L ++ RL K+
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 349 D----VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
D V +Y+TI++V+ +A+L+ A+ + M+ + N V ++++I E+A
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 405 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 464
L +EM G EPN ++ I+ +A + DRA F +
Sbjct: 420 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS---------------- 463
Query: 465 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKT 522
+G Q+L Y T++ A HAK L++E+K
Sbjct: 464 -----------SGVEIDQVL--------------YQTMIVAYERVGLMGHAKRLLHELKL 498
Query: 523 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 582
P+ I I I E A + + ++G D+ + I + ++ +
Sbjct: 499 ----PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVN 554
Query: 583 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
+ ++E+M++ P+ +L A YG E ++ +Y++MQ+ G
Sbjct: 555 VIEVFEKMRTAGYFPDSNVIAMVLNA---YGKQREFEKADTVYREMQEEG 601
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 194/426 (45%), Gaps = 23/426 (5%)
Query: 209 ILFCNIISEFGKRR-DLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE 267
+L+ N+I E +R D A+ + LK+ P++ Y ++I+ G F ++R + +
Sbjct: 226 VLYSNLI-ELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIK 284
Query: 268 DLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
++ + PN +++L++V + + L+++ M+ + D+T+ NI++ V G
Sbjct: 285 EMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID---VYG 341
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
++D+ ++ + L + ++ +V +Y+TI++V+ +A+L+ A+ + M+ + N
Sbjct: 342 QLDMVKEADRLFWSLRKMD-IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNV 400
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
V ++++I E+A L +EM G EPN ++ I+ +A + DRA F
Sbjct: 401 VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
L S G + L Q I V +++ L + P T T+L
Sbjct: 461 ------LRSSGVEIDQVLYQTMIVAYERV-GLMGHAKRLLHELKLPDNIPRETAITILAK 513
Query: 506 CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 565
G A + + G + + +I++ + IE+ + M AG PD
Sbjct: 514 AGRTE-EATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 572
Query: 566 AYTTAIKVCVESKNFKQALTLYEEMKS--CEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 623
+ + + F++A T+Y EM+ C + P+ V + L S Y S + + +
Sbjct: 573 VIAMVLNAYGKQREFEKADTVYREMQEEGC-VFPDEVHFQML----SLYSSKKDFEMVES 627
Query: 624 IYQDMQ 629
++Q ++
Sbjct: 628 LFQRLE 633
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 190/432 (43%), Gaps = 32/432 (7%)
Query: 215 ISEFGKRRDLISALEAYD---ALKKHLD----GPNMYIYRAIIDACGLCGDFMKSRYIYE 267
+ +F + I+ + YD AL K ++ N+Y +I+ C +
Sbjct: 88 VIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMG 147
Query: 268 DLLNQKITPNIYVFNSLMN---VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
++ PN F++L+N + R ++ L + M +G KPD+ + N L+ C++
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGR-VSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G+ A+ M K +E + + TY ++ V + +A+++ M + L+
Sbjct: 207 GKE--AEAMLLIDKMVEY--GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
V +S +I+ G ++ A LF EM + G N +NI++ A ++D +
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 445 SW---KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
K N + +F +S +K+G + A + + I P T TY +
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI---------APDTITYTS 373
Query: 502 LLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
L+ C ++ A +++ M + G PN T++ILI+ ++ +E+ + M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 619
+ D + Y T I+ E A L++EM S ++ PN VTY LL G E +
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG---ESE 490
Query: 620 QCLAIYQDMQKA 631
+ L I++ ++K+
Sbjct: 491 KALEIFEKIEKS 502
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/546 (22%), Positives = 234/546 (42%), Gaps = 52/546 (9%)
Query: 111 IRGRNVWTVIDTLKKVQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLAR 170
I R + TVID + SA D++ A C++M + G IA + + ++
Sbjct: 80 IHSRPLPTVIDFSR-------LFSAIAKTKQYDLVLALCKQMELKG-IAHNLYTLSIMIN 131
Query: 171 FQLPIREL-VQPSDMIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALE 229
R+L + S M K L P I F +I+ + ALE
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPN------------TITFSTLINGLCLEGRVSEALE 179
Query: 230 AYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV-- 287
D + + P++ +++ L G ++ + + ++ PN + ++NV
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 288 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 347
S + + + M+ +K D Y+I++ C G +D A +++ E++ + +
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME----MKGIT 295
Query: 348 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 407
++ TY+ +I F +A W K+ DM +N N V +S LI++ G + +A +L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 408 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG-SFGEGYNSNLKQG 466
+EM+ G P+T + ++ + D+A N+M+ +G + N++
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKA---------NQMVDLMVSKGCDPNIRTF 406
Query: 467 SI-----HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINE 519
+I A + +G + +S T TYNTL++ C + AK L E
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLR---GVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 520 MKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
M + + PN +T+ IL+D +C E+ E A+EI + + + ++ D+ Y I +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGES-EKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
A L+ + + P TYN ++ K G + E + +++ M++ G+ P+ +
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE---LLFRKMEEDGHAPDGW 579
Query: 639 YLEELI 644
LI
Sbjct: 580 TYNILI 585
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 153/313 (48%), Gaps = 19/313 (6%)
Query: 232 DALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD 291
D +K+ ++ PN+ + +ID+ G ++ ++++++++ I P+ + SL++ ++
Sbjct: 323 DMIKRKIN-PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 292 --LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 349
L + +M + G P++ ++NIL+ C A R+D ++++++ S+ + D
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM----SLRGVVAD 437
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 409
TY+T+I+ F + +A ++ +M S V N V + L++ G E+A+++FE
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 410 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 469
++ + E + +NII+H A + D A+ F S +G +K +I
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP--------LKGVKPGVKTYNIM 549
Query: 470 NATTVPNG-FSNSQIL-SFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGL 525
G S +++L E P TYN L++A D K+ LI E+K G
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Query: 526 SPNQITWSILIDI 538
S + T ++ID+
Sbjct: 610 SVDASTIKMVIDM 622
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 182/379 (48%), Gaps = 16/379 (4%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNS--RDLTYTLNIYQI 301
++Y +I +C G + IY + N+++ ++++++ + + + +Y
Sbjct: 524 HLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLN 583
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
+++ G+ D ++I+++ AG ++ A + L+ ++ + DV+ + +++++
Sbjct: 584 LKSSGVVLDRIGFSIVVRMYVKAGSLEEACSV---LEIMDEQKDIVPDVYLFRDMLRIYQ 640
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
L + + +R +G++ N ++ +IN CA A +++ FEEM+ G PNT
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ-GSIHNATTVPNGFSN 480
FN++L +A + + F K + ++ YN+ + G + T + + N
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVIS--YNTIIAAYGKNKDYTNMSSAIKN 758
Query: 481 SQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK--ALINEMKTVGLSPNQITWSILIDI 538
Q F+ + YNTLL A G D K +++ MK P+ T++I+I+I
Sbjct: 759 MQFDGFS------VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINI 812
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 598
G ++ ++LK + ++G+ PD+ +Y T IK ++A+ L +EM+ I P+
Sbjct: 813 YGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD 872
Query: 599 WVTYNTLLKARSKYGSVLE 617
VTY L+ A + LE
Sbjct: 873 KVTYTNLVTALRRNDEFLE 891
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 22/279 (7%)
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMA------LKVKHDMRSAGVNLNTVAWSSLINACAH 397
G+L + YS I++V + W A L H+ + + NTV I AC
Sbjct: 168 GKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV-----IYACTK 222
Query: 398 AGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA-FRFFHSWKGNKMLGSFG 456
G V+ A + F ML G PN +++ + + A F F H K + S
Sbjct: 223 KGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-- 280
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH--AK 514
Y+S + +I+ + + +++ ++ + +L A A+
Sbjct: 281 -AYSSMI---TIYTRLRLYD--KAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAE 334
Query: 515 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 574
+++ M+ G SPN I ++ LI G +E A + + + G++PD +Y + I+
Sbjct: 335 SILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGW 394
Query: 575 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
+ N+++A Y+E+K C PN TL+ ++KYG
Sbjct: 395 GRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYG 433
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/474 (18%), Positives = 197/474 (41%), Gaps = 63/474 (13%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDG----PNMYIYRAIIDACGLCGDFMKSRY 264
I + +I+ +GK I +EA L L P+ YR++I+ G ++ ++++
Sbjct: 350 IAYNTLITGYGK----IFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKH 405
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
Y++L PN + +L+N+ ++ D + + M +G + + I+L+A
Sbjct: 406 YYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYE 464
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
G++D+ + K H ++L+ ++S+++ + + L + + +
Sbjct: 465 KVGKIDVVPCVLKGSFH----NHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSA 520
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ + LI +C +G + A++++ + + E N + ++ ++ A +
Sbjct: 521 FESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKL 580
Query: 443 FHSWKGNKMLG---SFGEGYNSNLKQGSIHNATT-----------VPNGFSNSQILSFTE 488
+ + K + ++ F +K GS+ A + VP+ + +L +
Sbjct: 581 YLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQ 640
Query: 489 RFPFTP----------------TTSTYNTLLKACGSDYYHAKAL--------INEMKTVG 524
+ YN ++ C A+AL EM G
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCC------ARALPLDELSGTFEEMIRYG 694
Query: 525 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 584
+PN +T+++L+D+ G + + E+ G+ DVI+Y T I ++K++
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMS 753
Query: 585 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
+ + M+ + YNTLL A YG ++++ +I + M+K+ P+ Y
Sbjct: 754 SAIKNMQFDGFSVSLEAYNTLLDA---YGKDKQMEKFRSILKRMKKSTSGPDHY 804
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEML-LAGCEPNTQCFNIILHACVEACQYDRAFRF 442
N VA+S ++ ++A L +E+ + + Q FN +++AC + A ++
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 443 FHSWKGNKMLGSFGE-------GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 495
FH M+ FG G L Q + N FS+ + ++
Sbjct: 233 FH------MMLEFGVRPNVATIGMLMGLYQKN-WNVEEAEFAFSHMRKFGIVCESAYSSM 285
Query: 496 TSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
+ Y L Y A+ +I+ MK + W ++++ +E A IL SM
Sbjct: 286 ITIYTRL-----RLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 556 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
AG P++IAY T I + + A L+ + + + P+ +Y ++++ +G
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG---WGRA 397
Query: 616 LEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
++ YQ++++ GYKPN + L LI
Sbjct: 398 DNYEEAKHYYQELKRCGYKPNSFNLFTLI 426
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/452 (19%), Positives = 177/452 (39%), Gaps = 78/452 (17%)
Query: 193 NPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALK--KHLDGPNMYIYRAII 250
N ++ V Y+++ P + CN I + + +A++ +D ++ L G N Y I+
Sbjct: 123 NGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVG-NFVAYSLIL 181
Query: 251 DACGLCGDFMKSRYIYEDLLN-QKITPNIYVFNSLMNVNSRDLTYTL--NIYQIMQNLGL 307
G ++ ++ + ++L + + VFN+++ ++ L + +M G+
Sbjct: 182 RVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGV 241
Query: 308 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 367
+P++ + +L+ V+ A+ + ++ V YS++I ++ +L+
Sbjct: 242 RPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-----AYSSMITIYTRLRLYD 296
Query: 368 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 427
A +V M+ V L W ++NA + G +E A + M AG PN +N ++
Sbjct: 297 KAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLI 356
Query: 428 HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT 487
+G+ + QG H +
Sbjct: 357 TG-------------------------YGKIFKMEAAQGLFHRLCNI------------- 378
Query: 488 ERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 545
P ++Y ++++ G +Y AK E+K G PN LI++ +
Sbjct: 379 ---GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDR 435
Query: 546 EGAIEILKSMGDAGIKPDVI------AYTTAIKV----CVESKNFKQALTLYEEMKSCEI 595
+GAI+ ++ M G + I AY K+ CV +F + L
Sbjct: 436 DGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRL--------- 486
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
N ++++L+ A K+G V CL + ++
Sbjct: 487 --NQTSFSSLVMAYVKHGM---VDDCLGLLRE 513
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 159 AEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLA----VRYASLLPHAH-----I 209
A A+ L E+ F+ IR P+ + +L K V LL H I
Sbjct: 675 ARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVI 734
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYI--YRAIIDACGLCGDFMKSRYIYE 267
+ II+ +GK +D + A ++ DG ++ + Y ++DA G K R I +
Sbjct: 735 SYNTIIAAYGKNKDYTNMSSAIKNMQ--FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK 792
Query: 268 DLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
+ P+ Y +N ++N+ + ++ + ++ GL PD+ SYN L+KA + G
Sbjct: 793 RMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGG 852
Query: 326 RVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKV------FADAKLWQMALK 371
V+ A + KE++ GR + D TY+ ++ F +A W + +K
Sbjct: 853 MVEEAVGLVKEMR-----GRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMK 900
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 186/421 (44%), Gaps = 31/421 (7%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
ALE D + + P + A+++ L G + + + ++ PN + ++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 287 V--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
V S + + + M+ +K D Y+I++ C G +D A +++ E++ +
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME----IK 276
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
K D+ Y+T+I+ F A W K+ DM + + VA+S+LI+ G + +A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 405 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG-SFGEGYNSNL 463
+L +EM+ G P+T + ++ + Q D+A N ML +G N+
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA---------NHMLDLMVSKGCGPNI 387
Query: 464 KQGSI-----HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKAL 516
+ +I A + +G + +S T TYNTL++ C AK L
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLR---GVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 517 INEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
EM + + P+ +++ IL+D +C E E A+EI + + + ++ D+ Y I
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEP-EKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
+ A L+ + + P+ TYN ++ K GS+ E +++ M++ G+ P
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD---LLFRKMEEDGHSP 560
Query: 636 N 636
N
Sbjct: 561 N 561
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 167/398 (41%), Gaps = 50/398 (12%)
Query: 272 QKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
+ I N+Y + ++N R L+ + + LG +PD +++ L+ C+ GRV
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 330 AQDMYK---ELKHLESV-------------GRLKLDVF---------------TYSTIIK 358
A ++ E+ H ++ G++ V TY ++K
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
V + +A+++ M + L+ V +S +I+ G ++ A LF EM + G +
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVP 475
+ + ++ A ++D + K+ + +F + +K+G + A +
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWS 533
I +P T TY +L+ + KA +++ M + G PN T++
Sbjct: 341 KEMIQRGI---------SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
ILI+ ++ +E+ + M G+ D + Y T I+ E + A L++EM S
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
+ P+ V+Y LL G E ++ L I++ ++K+
Sbjct: 452 RVRPDIVSYKILLDGLCDNG---EPEKALEIFEKIEKS 486
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 153/354 (43%), Gaps = 14/354 (3%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
II K L +A ++ ++ ++ IY +I G + + D++ +K
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 274 ITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
ITP++ F++L++ V L +++ M G+ PD +Y L+ C ++D A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
M L + S G ++ T++ +I + A L L++ M GV +TV +++L
Sbjct: 373 HM---LDLMVSKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
I G +E A +LF+EM+ P+ + I+L + + ++A F + +KM
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 452 LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SD 509
G N+ + NA+ V + + L P TYN ++ C
Sbjct: 489 ELDIG---IYNIIIHGMCNASKVDDAWDLFCSLPLK---GVKPDVKTYNIMIGGLCKKGS 542
Query: 510 YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
A L +M+ G SPN T++ILI G + + ++++ + G D
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 11/249 (4%)
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 461
+ A+ LF+EM + P F+ + QYD K ++ G Y
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDL---CKQMELKGIAHNLYTL 110
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINE 519
++ + FS + + + P T T++TL+ + ++A L++
Sbjct: 111 SIMINCCCRCRKLSLAFS---AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M +G P IT + L++ V A+ ++ M + G +P+ + Y +KV +S
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYY 639
A+ L +M+ +I + V Y+ ++ K GS + ++ +M+ G+K +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS---LDNAFNLFNEMEIKGFKADIII 284
Query: 640 LEELIEEWC 648
LI +C
Sbjct: 285 YTTLIRGFC 293
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 177/420 (42%), Gaps = 63/420 (15%)
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSY 314
GD + + + ++ + + PN++ +N + +L + + + G KPD+ +Y
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
N L+ C + A+ +Y L + + G L+ D +TY+T+I + + Q+A ++
Sbjct: 290 NNLIYGLCKNSKFQEAE-VY--LGKMVNEG-LEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
D G + + SLI+ H G +A+ LF E L G +PN +N ++
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL---- 401
Query: 435 QYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 494
SN QG I A + N S ++ P
Sbjct: 402 --------------------------SN--QGMILEAAQLANEMSEKGLI---------P 424
Query: 495 TTSTYNTLLKA-----CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
T+N L+ C SD A L+ M + G P+ T++ILI +E A+
Sbjct: 425 EVQTFNILVNGLCKMGCVSD---ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
EIL M D G+ PDV Y + + ++ F+ + Y+ M PN T+N LL++
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKKSE 669
+Y ++ + L + ++M+ P+ LI+ +C+ N + ++ +K E
Sbjct: 542 CRY---RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK-----NGDLDGAYTLFRKME 593
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 193/453 (42%), Gaps = 44/453 (9%)
Query: 221 RRDLISALEAYDALKKHLDGPN-MYIYRAIIDACGLCGDFMKSRYIYEDL---LNQKITP 276
++D + ALE +++++K + + + YR++I+ G G F + D+ + +
Sbjct: 17 QKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLE 76
Query: 277 NIYVFNSLMNVNSR-DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK 335
+YV ++ N + + +N+++ M +P + SYN ++ +G D A +Y
Sbjct: 77 GVYV-GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135
Query: 336 ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINAC 395
++ + DV++++ +K F AL++ ++M S G +N VA+ +++
Sbjct: 136 RMRDR----GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF 455
+ +LF +ML +G FN +L + + +L +
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 456 GEGYNSNL------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-G 507
+ NL ++G + A + + E+ P P TYN L+ C
Sbjct: 252 ---FTYNLFIQGLCQRGELDGAVRM--------VGCLIEQGP-KPDVITYNNLIYGLCKN 299
Query: 508 SDYYHAKALINEMKTVGLSPNQITWSILI-DICGGTENVEGAIEILKSM-GDA---GIKP 562
S + A+ + +M GL P+ T++ LI C G G +++ + + GDA G P
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG-----GMVQLAERIVGDAVFNGFVP 354
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 622
D Y + I +AL L+ E I PN + YNTL+K S G +LE Q
Sbjct: 355 DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ-- 412
Query: 623 AIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQD 654
+ +M + G P L+ C+ G + D
Sbjct: 413 -LANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 202/480 (42%), Gaps = 55/480 (11%)
Query: 220 KRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPN 277
K+ D+ + D + K PN++ Y I GLC G+ + + L+ Q P+
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ--GLCQRGELDGAVRMVGCLIEQGPKPD 285
Query: 278 IYVFNSLMNVNSRDLTYT-LNIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK 335
+ +N+L+ ++ + +Y M N GL+PD +YN L+ C G V LA+ +
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 336 ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINAC 395
+ V D FTY ++I AL + ++ G+ N + +++LI
Sbjct: 346 DAVFNGFVP----DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA-CVEAC--QYDRAFRFFHSWKGNKML 452
++ G++ +A QL EM G P Q FNI+++ C C D + S +
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 453 GSFG---EGYNSNLKQGSIHNATTV----------PNGFS-NSQILSFTERFPFTPTTST 498
+F GY++ LK + NA + P+ ++ NS + + F T
Sbjct: 462 FTFNILIHGYSTQLK---MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 499 YNTLL-KACGSDYY----------------HAKALINEMKTVGLSPNQITWSILIDICGG 541
Y T++ K C + + A L+ EMK ++P+ +T+ LID
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 542 TENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 600
+++GA + + M +A + Y I E N A L++EM + P+
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 601 TYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQA 660
TY ++ K G+V + L +M + G+ P+ L +I C ++R Y+A
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLL---EMMENGFIPSLTTLGRVINCLC----VEDRVYEA 691
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 151/361 (41%), Gaps = 38/361 (10%)
Query: 323 VAGRVDLAQDMYKELKHLESVGR---LKLDVFTYSTIIKVFADAKLWQMALKVKHDMR-S 378
V + +D K L+ S+ + K + TY ++I+ ++ +V DMR +
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 379 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 438
G ++ + + G V++A+ +FE M CEP +N I+ V++ +D+
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 439 AFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPNGFSNS----QILSFT---- 487
A + + + + + SF S K H A + N S+ ++++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 488 ----ERFP--------------FTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSP 527
E F + ST+N LL+ C D + L++++ G+ P
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 528 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 587
N T+++ I ++GA+ ++ + + G KPDVI Y I ++ F++A
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 588 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
+M + + P+ TYNTL+ K G VQ I D G+ P+ + LI+
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGM---VQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 648 C 648
C
Sbjct: 367 C 367
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 148/385 (38%), Gaps = 88/385 (22%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
P+ + YR++ID GLC G+ ++ ++ + L + I PN+ ++N+L+ N +
Sbjct: 354 PDQFTYRSLID--GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK--------------------- 335
+ M GL P++ ++NIL+ C G V A + K
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 336 --ELKHLESVGRLKL--------DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
+LK ++ L + DV+TY+
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYN------------------------------- 500
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
SL+N E ++ ++ M+ GC PN FNI+L + + D A
Sbjct: 501 ----SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 446 WKGNKMLG----SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
K NK + +FG + K G + A T+ E + + +T TYN
Sbjct: 557 MK-NKSVNPDAVTFGTLIDGFCKNGDLDGAYTL--------FRKMEEAYKVSSSTPTYNI 607
Query: 502 LLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
++ A + A+ L EM L P+ T+ +++D T NV + L M + G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 560 IKPDVIAYTTAIK-VCVESKNFKQA 583
P + I +CVE + ++ A
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAA 692
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 130/580 (22%), Positives = 243/580 (41%), Gaps = 87/580 (15%)
Query: 131 ISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARF---------QLPIREL--- 178
I LS++ N A I R MVMSG + V ++ R L +RE+
Sbjct: 232 ILLSSYYNLHA---IEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEM 288
Query: 179 -VQPSDM-------------IKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDL 224
V P+ + I R L+ ++ VR +P +++ ++ K DL
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG---IPVDLVVYTVLMDGLFKAGDL 345
Query: 225 ISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFN 282
A + + L + PN+ Y A++D GLC GD + +I +L + + PN+ ++
Sbjct: 346 REAEKTFKMLLEDNQVPNVVTYTALVD--GLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 283 SLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK-- 338
S++N V L +++ + M++ + P+ +Y ++ AG+ ++A ++ KE++
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463
Query: 339 --------------HLESVGRLK---------------LDVFTYSTIIKVFADAKLWQMA 369
HL+ +GR+K LD Y+++I VF + A
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523
Query: 370 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
L +M+ G+ + V+++ LI+ G V A ++ M G EP+ FNI++++
Sbjct: 524 LAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNS 582
Query: 430 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS--QILSFT 487
+ + + + K G +L +I NG IL+
Sbjct: 583 QRKQGDSEGILKLWDKMKSC--------GIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 634
Query: 488 ERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV---GLSPNQITWSILIDICGGTEN 544
P +TY L S + A A+ +T+ G+ ++ ++ LI
Sbjct: 635 MLMEIHPNLTTYRIFLDT-SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGM 693
Query: 545 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 604
+ A ++ M G PD + + + + + ++AL+ Y M I PN TYNT
Sbjct: 694 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 753
Query: 605 LLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
+++ S G + EV + L+ +M+ G +P+D+ LI
Sbjct: 754 IIRGLSDAGLIKEVDKWLS---EMKSRGMRPDDFTYNALI 790
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 184/412 (44%), Gaps = 18/412 (4%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIY 299
N YI A+++ G + + + +D++++ +T + + SL++V D L
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+ MQ G+ D+ SYN+L+ G+V A YK ++ ++ D+ T++ ++
Sbjct: 528 EEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMRE----KGIEPDIATFNIMMNS 582
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
+ LK+ M+S G+ + ++ + ++ G +E+AI + +M+L PN
Sbjct: 583 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 642
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 479
+ I L + ++ RA F K ++ L S+G + + I +
Sbjct: 643 LTTYRIFLDT---SSKHKRADAIF---KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKK 696
Query: 480 NSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILID 537
+ ++ E F P T T+N+L+ GS A + + M G+SPN T++ +I
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
++ + L M G++PD Y I + N K ++T+Y EM + + P
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
Query: 598 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
TYN L+ + G +L+ ++ L ++M K G PN +I C+
Sbjct: 817 KTSTYNVLISEFANVGKMLQARELL---KEMGKRGVSPNTSTYCTMISGLCK 865
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 188/435 (43%), Gaps = 36/435 (8%)
Query: 274 ITPNIYVFNSLM---NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
+ P+ ++NSL+ NVN IY M G+ PD+ + N+L+ + C GR+ A
Sbjct: 89 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+ + + +D TY+T+I + L A + +M G+ +TV++++
Sbjct: 149 ISLLRNRV-------ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNT 201
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
LI+ G +A L +E+ E N I+L + + A+R +
Sbjct: 202 LIDGFCKVGNFVRAKALVDEI----SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDP 257
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GS 508
+ +F N K G + +L E P TY TL+ + +
Sbjct: 258 DVVTFSSIINRLCKGGKV---------LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN 308
Query: 509 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
Y HA AL ++M G+ + + +++L+D ++ A + K + + P+V+ YT
Sbjct: 309 IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
+ ++ + A + +M + PN VTY++++ K G +++ +++ + M
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM---LEEAVSLLRKM 425
Query: 629 QKAGYKPNDYYLEELIEEWCEGVIQDNREYQA-EFSSIKKSELERPQSLLLEKIAAHLLK 687
+ PN + +I +G+ + +E A E S + + +L+ + H LK
Sbjct: 426 EDQNVVPNGFTYGTVI----DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNH-LK 480
Query: 688 RVADILAIDVQGLTK 702
R+ I +V+GL K
Sbjct: 481 RIGRIK--EVKGLVK 493
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/444 (18%), Positives = 191/444 (43%), Gaps = 47/444 (10%)
Query: 227 ALEAYDALKKHLDG---PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNS 283
A EAY L + + P+ Y +ID G+F++++ + +++ + + + +S
Sbjct: 177 ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSS 236
Query: 284 LMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 343
N+++ + Y+ M G PD+ +++ ++ C G+V + +E++ +
Sbjct: 237 YYNLHAIE-----EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS-- 289
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
+ + TY+T++ A +++ AL + M G+ ++ V ++ L++ AG + +
Sbjct: 290 --VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLRE 347
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYN 460
A + F+ +L PN + ++ +A A ++ ++ N
Sbjct: 348 AEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Query: 461 SNLKQGSIHNATT----------VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--S 508
+K+G + A + VPNGF+ ++ + + ++ G
Sbjct: 408 GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE 467
Query: 509 DYYHAKALINEMKTV----------------GLSPNQITWSILIDICGGTENVEGAIEIL 552
+ Y AL+N +K + G++ +QI ++ LID+ + E A+
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+ M + G+ DV++Y I ++ A Y+ M+ I P+ T+N ++ ++ K
Sbjct: 528 EEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPN 636
G + + L ++ M+ G KP+
Sbjct: 587 G---DSEGILKLWDKMKSCGIKPS 607
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 146/339 (43%), Gaps = 49/339 (14%)
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
+ ++ V + T+ +++ + A + M + GV ++ W+SLI+ GLV
Sbjct: 53 KTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQ 112
Query: 405 IQL-FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 463
+ L + +M+ G P+ N+++H+ C+ R F S N+++ YN+ +
Sbjct: 113 VSLIYSKMIACGVSPDVFALNVLIHS---FCKVGR-LSFAISLLRNRVISIDTVTYNTVI 168
Query: 464 KQGSIHNATTVPNGFSNS--QILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINE 519
H G ++ Q LS + P T +YNTL+ C ++ AKAL++E
Sbjct: 169 SGLCEH-------GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 520 ----------------------------MKTVGLSPNQITWSILID-ICGGTENVEGAIE 550
M G P+ +T+S +I+ +C G + +EG +
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL- 280
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 610
+L+ M + + P+ + YTT + ++ ++ AL LY +M I + V Y L+
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 611 KYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
K G + E ++ + + + PN L++ C+
Sbjct: 341 KAGDLREAEKTFKMLLEDNQV---PNVVTYTALVDGLCK 376
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 245 IYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN---VNSRDLTYTLNIYQI 301
+Y +I G K+ + D+ + P+ FNSLM+ V S + L+ Y +
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH-VRKALSTYSV 738
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M G+ P++ +YN +++ AG L +++ K L ++S G ++ D FTY+ +I
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAG---LIKEVDKWLSEMKSRG-MRPDDFTYNALIS--G 792
Query: 362 DAKLWQM--ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
AK+ M ++ + +M + G+ T ++ LI+ A+ G + QA +L +EM G PN
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Query: 420 TQCFNIILHACVEACQY 436
T + ++ + C +
Sbjct: 853 TSTYCTMISGLCKLCTH 869
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 181/422 (42%), Gaps = 35/422 (8%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNI 298
P++ Y +I A G ++ + + + +P +Y +N+++N + Y +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M GL PD T+Y LL C G V + ++ +++ + V D+ +S+++
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP----DLVCFSSMMS 383
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
+F + AL + ++ AG+ + V ++ LI G++ A+ L EML GC
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY------NSNLKQGSIHNAT 472
+ +N ILH + A + F+ + F + Y + + K G++ NA
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERAL---FPDSYTLTILIDGHCKLGNLQNAM 500
Query: 473 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQI 530
+ +I TYNTLL G D AK + +M + + P I
Sbjct: 501 ELFQKMKEKRI---------RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 531 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 590
++SIL++ ++ A + M IKP V+ + IK S N + E+M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 591 KSCEIHPNWVTYNTLLKARSKYGSVLE--VQQCLAIYQDM--QKAGYKPNDYYLEELIEE 646
S P+ ++YNTL+ YG V E + + + + M ++ G P+ + ++
Sbjct: 612 ISEGFVPDCISYNTLI-----YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 647 WC 648
+C
Sbjct: 667 FC 668
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 192/452 (42%), Gaps = 43/452 (9%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDAC-GLCGDFMKSRYI------Y 266
+I + + R L A EA+ L+ + IDAC L G ++ ++ Y
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKG-------FTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 267 EDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
+++ + N+Y N ++N +D + +Q G+ PD+ +YN L+ A
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G L ++ ++ + + G V+TY+T+I ++ A +V +M +G++ +
Sbjct: 284 G---LMEEAFELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
+ + SL+ G V + ++F +M P+ CF+ ++ + D+A +F+
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 445 SWK------GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 498
S K N + +GY ++G I A + N T
Sbjct: 400 SVKEAGLIPDNVIYTILIQGY---CRKGMISVAMNLRNEMLQQGC---------AMDVVT 447
Query: 499 YNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 556
YNT+L C A L NEM L P+ T +ILID N++ A+E+ + M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 616
+ I+ DV+ Y T + + + A ++ +M S EI P ++Y+ L+ A G +
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 617 EVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
E ++ +M KP +I+ +C
Sbjct: 568 EA---FRVWDEMISKNIKPTVMICNSMIKGYC 596
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 193/423 (45%), Gaps = 27/423 (6%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAII-DACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
A E + + + P+ YR+++ +AC GD +++ ++ D+ ++ + P++ F+S+M
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKK-GDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 286 NVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 343
++ +R +L L + ++ GL PD Y IL++ C G + +A ++ E+
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
+DV TY+TI+ K+ A K+ ++M + ++ + LI+ G ++
Sbjct: 443 ----MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYN 460
A++LF++M + +N +L + D A + ++L S+ N
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 461 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALIN 518
+ +G + A V + + I PT N+++K C S + ++ +
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNI---------KPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 519 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD--AGIKPDVIAYTTAIKVCVE 576
+M + G P+ I+++ LI EN+ A ++K M + G+ PDV Y + +
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 577 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
K+A + +M ++P+ TY ++ + S + + I+ +M + G+ P+
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMING---FVSQDNLTEAFRIHDEMLQRGFSPD 726
Query: 637 DYY 639
D +
Sbjct: 727 DKF 729
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ + ++ FGK D+ +A E + + P Y +++A G ++ ++++
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
++++ I P + + NS++ S + + + + M + G PD SYN L+
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ A + K+++ E G L DVFTY++I+ F + A V M GVN +
Sbjct: 636 MSKAFGLVKKME--EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
++ +IN + +A ++ +EML G P+ +
Sbjct: 694 TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 189/438 (43%), Gaps = 59/438 (13%)
Query: 210 LFCNIIS--------EFGKRRDLISALEAYD---ALKKHLD----GPNMYIYRAIIDACG 254
LFC +I +F K I+ + YD +L H++ G ++Y Y +I+
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 255 LCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMT 312
C F+ + + ++ P++ +SL+N + +++ M+ +G +PD+
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 313 SYNILLKACCVAGRVDLAQDMYKELKH----------------------LESVGRLKLD- 349
YN ++ C G V+ A +++ ++ RL D
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 350 --------VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
V T++ +I VF + A+K+ +M V+ + ++SLIN G V
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 461
++A Q+ + M+ GC P+ +N +++ ++ + D + F ++G YN+
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD-TITYNT 354
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NE 519
+ QG P+ + +I S R P TY+ LL ++ KAL+
Sbjct: 355 -IIQGYFQAGR--PD--AAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M+ + + T++I+I NVE A ++ +S+ G+KPDV++YTT I +
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 580 FKQALTLYEEMKSCEIHP 597
+ ++ LY +M+ + P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 167/381 (43%), Gaps = 40/381 (10%)
Query: 265 IYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
++ ++ + P+I F+ +++ S++ ++++ M+ G+ D+ SYNI++ C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 323 VAGRVDLAQDMYKELKHLESVGRL-----KLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
R +A L VG++ + DV T S++I F A+ + M
Sbjct: 116 RCSRFVIA---------LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 378 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
G + V ++++I+ GLV A++LF+ M G + +N ++ + ++
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 438 RAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 494
A R ++ +F + +K+G A ++ R P
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM---------KLYEEMTRRCVDP 277
Query: 495 TTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
TYN+L+ C AK +++ M T G P+ +T++ LI+ ++ V+ ++
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+ M G+ D I Y T I+ ++ A ++ M S PN TY+ LL Y
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL-----Y 389
Query: 613 GSVL--EVQQCLAIYQDMQKA 631
G + V++ L ++++MQK+
Sbjct: 390 GLCMNWRVEKALVLFENMQKS 410
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 154/348 (44%), Gaps = 22/348 (6%)
Query: 112 RGRNVWTVIDTLKKVQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARF 171
+G V+ ID + K++ + + + +D C+ G + +AVEL + + R
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID---GSCK----IGLVNDAVELFDRMERD 203
Query: 172 QLPIRELVQPSDMIKRCVLSRNPKLA-----VRYASLLPHAHILFCNIISEFGKRRDLIS 226
+ + S + C R A + ++P+ I F +I F K
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV-ITFTAVIDVFVKEGKFSE 262
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
A++ Y+ + + P+++ Y ++I+ + G +++ + + ++ + P++ +N+L+N
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 287 --VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
S+ + +++ M GL D +YN +++ AGR D AQ+++ +
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS----- 377
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
+ ++ TYS ++ + AL + +M+ + + L+ ++ +I+ G VE A
Sbjct: 378 --RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 405 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
LF + G +P+ + ++ Q+D++ + + + +L
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 25/273 (9%)
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
V +S +++ A + + I LF M + G + +NI+++ C+ C RF +
Sbjct: 70 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN-CLCRCS-----RFVIA 123
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ-------ILSFTERFPFTPTTST 498
+ FG + + +++ NGF ++S E F P
Sbjct: 124 LSVVGKMMKFG-------YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 176
Query: 499 YNTLLK-ACGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 556
YNT++ +C + A L + M+ G+ + +T++ L+ + A +++ M
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 616
I P+VI +T I V V+ F +A+ LYEEM + P+ TYN+L+ +G V
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 617 EVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
E +Q L + M G P+ LI +C+
Sbjct: 297 EAKQMLDL---MVTKGCLPDVVTYNTLINGFCK 326
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 186/409 (45%), Gaps = 17/409 (4%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNI 298
P+ + +I L ++ + + ++ + PN+ + ++N D LN+
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
M+ ++ D+ +N ++ + C VD A +++KE+ E+ G ++ +V TYS++I
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM---ETKG-IRPNVVTYSSLIS 303
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
W A ++ DM +N N V +++LI+A G +A +L+++M+ +P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ +N +++ + D+A + F YN+ +K + V +G
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT-YNTLIK--GFCKSKRVEDG- 419
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILI 536
+++ T TY TL++ D +A+ + +M + G+ P+ +T+SIL+
Sbjct: 420 --TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
D +E A+E+ M + IK D+ YTT I+ ++ L+ + +
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 597 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
PN VTYNT++ S S +Q+ A+ + M++ G PN LI
Sbjct: 538 PNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 166/389 (42%), Gaps = 45/389 (11%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
++F II K R + AL + ++ PN+ Y ++I G + + + D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
++ +KI PN+ FN+L++ V +Y M + PD+ +YN L+ C+ R
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+D A+ M++ + + DV TY+T+IK F +K + ++ +M G+ +TV
Sbjct: 381 LDKAKQMFEFMVSKDCFP----DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++LI H G + A ++F++M+ G P+ ++I+L + ++A F
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 506
+ +++ + I+ TT+ G + KA
Sbjct: 497 QKSEI-------------KLDIYIYTTMIEG------------------------MCKAG 519
Query: 507 GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
D L + G+ PN +T++ +I ++ A +LK M + G P+
Sbjct: 520 KVD--DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEI 595
Y T I+ + + + L EM+SC
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRF 606
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 177/380 (46%), Gaps = 20/380 (5%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
PN+ Y +++ GLC GD + + + KI ++ +FN++++ R + L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N+++ M+ G++P++ +Y+ L+ C GR A + ++ +E ++ ++ T++ +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEK--KINPNLVTFNAL 336
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I F + A K+ DM ++ + ++SL+N C H L ++A Q+FE M+
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL-DKAKQMFEFMVSKD 395
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C P+ +N ++ ++ + + F ++G + L QG H+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD--TVTYTTLIQGLFHDGDCDN 453
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWS 533
Q++S + P P TY+ LL ++ KAL + M+ + + ++
Sbjct: 454 AQKVFKQMVS--DGVP--PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
+I+ V+ ++ S+ G+KP+V+ Y T I + ++A L ++MK
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 594 EIHPNWVTYNTLLKARSKYG 613
PN TYNTL++A + G
Sbjct: 570 GPLPNSGTYNTLIRAHLRDG 589
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 152/356 (42%), Gaps = 51/356 (14%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M G +P++ +Y +++ C G DLA ++ +++ +++ DV ++TII
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME----AAKIEADVVIFNTIIDSLC 271
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ AL + +M + G+ N V +SSLI+ G A QL +M+ PN
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
FN ++ A V+ ++ A + Y+ +K+
Sbjct: 332 TFNALIDAFVKEGKFVEAEKL----------------YDDMIKR---------------- 359
Query: 482 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 539
P TYN+L+ C D AK + M + P+ +T++ LI
Sbjct: 360 ---------SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
++ VE E+ + M G+ D + YTT I+ + A ++++M S + P+
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 600 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQD 654
+TY+ LL G ++++ L ++ MQK+ K + Y +IE C+ G + D
Sbjct: 471 MTYSILLDGLCNNG---KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 173/438 (39%), Gaps = 90/438 (20%)
Query: 242 NMYIYRAIIDACGLC----------GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD 291
N I + ID CG+C GD+ + L + K+ I +F + V SR
Sbjct: 26 NPRIAPSSIDLCGMCYWGRAFSSGSGDY--REILRNGLHDMKLDDAIGLFGGM--VKSRP 81
Query: 292 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 351
L P + +N LL A + D+ + ++++ LE V L +
Sbjct: 82 L----------------PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL----Y 121
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
TY+ +I F +AL + M G + V SSL+N H + A+ L ++M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 412 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 471
+ G P+T F ++H G F +HN
Sbjct: 182 VEMGYRPDTITFTTLIH------------------------GLF------------LHNK 205
Query: 472 TTVPNGFSNSQILSFTERF---PFTPTTSTY----NTLLKACGSDYYHAKALINEMKTVG 524
S+ ++ +R P TY N L K +D A L+N+M+
Sbjct: 206 A--------SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL--ALNLLNKMEAAK 255
Query: 525 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 584
+ + + ++ +ID +V+ A+ + K M GI+P+V+ Y++ I + A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 585 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
L +M +I+PN VT+N L+ A K G +E ++ +Y DM K P+ + L+
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK---LYDDMIKRSIDPDIFTYNSLV 372
Query: 645 EEWCEGVIQDNREYQAEF 662
+C D + EF
Sbjct: 373 NGFCMHDRLDKAKQMFEF 390
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/528 (21%), Positives = 223/528 (42%), Gaps = 41/528 (7%)
Query: 132 SLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLS 191
SL NA+ + + CRR SG + + EVL R L EL + S
Sbjct: 16 SLVVRGNAATFPLSFSFCRRRAFSGK--TSYDYREVL-RTGLSDIELDDAIGLFGVMAQS 72
Query: 192 RNPKLAVRYASLLPH-AHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAII 250
R + ++ LL A + +++ FG++ +++ N+Y Y +I
Sbjct: 73 RPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGI------------SHNLYTYNILI 120
Query: 251 DACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLK 308
+ C + + ++ P+I NSL+N + ++ + + M +G K
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQ 367
PD ++ L+ + + A + + V R + D+ TY ++
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRM-----VQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 368 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 427
+AL + + M +A + N V +S++I++ + A+ LF EM G PN ++ ++
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 428 HACVEACQYDRAFRFFHSW---KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 484
++ A R K N L +F ++ +K+G + A + I
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI- 354
Query: 485 SFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGT 542
P TY++L+ C D AK ++ M PN +T++ LI+
Sbjct: 355 --------DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
+ V+ +E+ + M G+ + + YTT I ++++ A ++++M S +HPN +TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
N LL K G ++ + + +++ +Q++ +P+ Y +IE C+
Sbjct: 467 NILLDGLCKNG---KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 17/248 (6%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
+ Y+SL+ CN +G+ D L D +++ ++ PN+ + A+IDA G
Sbjct: 289 ITYSSLIS----CLCN----YGRWSDASRLLS--DMIERKIN-PNLVTFSALIDAFVKKG 337
Query: 258 DFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYN 315
+K+ +YE+++ + I PNI+ ++SL+N L + ++M P++ +YN
Sbjct: 338 KLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 316 ILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHD 375
L+ C A RVD ++++E+ VG + TY+T+I F A+ A V
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVG----NTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 435
M S GV+ N + ++ L++ G + +A+ +FE + + EP+ +NI++ +A +
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Query: 436 YDRAFRFF 443
+ +F
Sbjct: 514 WKMGGIYF 521
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 151/349 (43%), Gaps = 53/349 (15%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
P++ Y A+++ GLC GD + + + KI N+ +++++++ R L
Sbjct: 216 PDLVTYGAVVN--GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N++ M+N G++P++ +Y+ L+ C GR A + ++ +E ++ ++ T+S +
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM--IER--KINPNLVTFSAL 329
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
I F A K+ +M ++ N +SSLIN + +A Q+ E M+ C
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
PN +N +++ +A + D+ F ++G+
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN---------------------- 427
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSI 534
T TY TL+ D +A+ + +M +VG+ PN +T++I
Sbjct: 428 -------------------TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 583
L+D + A+ + + + + ++PD+ Y I+ ++ +K
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 182/412 (44%), Gaps = 58/412 (14%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
PN+ Y +++ GLC GD + + + KI ++ +FN++++ R + L
Sbjct: 148 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N+++ M+ G++P++ +Y+ L+ C GR A + ++ +E ++ ++ T++ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM--IEK--KINPNLVTFNAL 261
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I F + A K+ DM ++ + ++SLIN C H L ++A Q+FE M+
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL-DKAKQMFEFMVSKD 320
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C P+ +N ++ ++ + + F ++G
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD--------------------- 359
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWS 533
T TY TL++ D +A+ + +M + G+ P+ +T+S
Sbjct: 360 --------------------TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
IL+D +E A+E+ M + IK D+ YTT I+ ++ L+ +
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
+ PN VTYNT++ S S +Q+ A+ + M++ G P+ LI
Sbjct: 460 GVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 166/389 (42%), Gaps = 45/389 (11%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
++F II K R + AL + ++ PN+ Y ++I G + + + D
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
++ +KI PN+ FN+L++ V ++ M + PD+ +YN L+ C+ R
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+D A+ M++ + + D+ TY+T+IK F +K + ++ +M G+ +TV
Sbjct: 306 LDKAKQMFEFMVSKDCFP----DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++LI H G + A ++F++M+ G P+ ++I+L + ++A F
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 506
+ +++ + I+ TT+ G + KA
Sbjct: 422 QKSEI-------------KLDIYIYTTMIEG------------------------MCKAG 444
Query: 507 GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
D L + G+ PN +T++ +I ++ A +LK M + G PD
Sbjct: 445 KVD--DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEI 595
Y T I+ + + + L EM+SC
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRF 531
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 153/356 (42%), Gaps = 51/356 (14%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M G +P++ +Y +++ C G +DLA ++ +++ +++ DV ++TII
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME----AAKIEADVVIFNTIIDSLC 196
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ AL + +M + G+ N V +SSLI+ G A QL +M+ PN
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
FN ++ A V+ ++ A E + ++ + SI
Sbjct: 257 TFNALIDAFVKEGKFVEA-----------------EKLHDDMIKRSID------------ 287
Query: 482 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 539
P TYN+L+ C D AK + M + P+ T++ LI
Sbjct: 288 ------------PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
++ VE E+ + M G+ D + YTT I+ + A ++++M S + P+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 600 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQD 654
+TY+ LL G ++++ L ++ MQK+ K + Y +IE C+ G + D
Sbjct: 396 MTYSILLDGLCNNG---KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 147/359 (40%), Gaps = 56/359 (15%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P + +N LL A + DL + ++++ L + +++TY+ +I F +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG----ISHNLYTYNILINCFCRRSQISL 63
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
AL + M G + V SSL+N H + A+ L ++M+ G P+T F ++H
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
G F +HN S+ ++ +
Sbjct: 124 ------------------------GLF------------LHNKA--------SEAVALVD 139
Query: 489 RF---PFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE 543
R P TY ++ C D A L+N+M+ + + + ++ +ID
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
+V+ A+ + K M GI+P+V+ Y++ I + A L +M +I+PN VT+N
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEF 662
L+ A K G +E ++ ++ DM K P+ + LI +C D + EF
Sbjct: 260 ALIDAFVKEGKFVEAEK---LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 161/373 (43%), Gaps = 27/373 (7%)
Query: 269 LLNQKITPNIYVFNSLMNVNSR----DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
++ + P+I+ FN L++ ++ DL +L + MQ LG+ ++ +YNIL+ C
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLG--EKMQRLGISHNLYTYNILINCFCRR 58
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
++ LA + ++ L + + T S+++ + K A+ + M G +
Sbjct: 59 SQISLALALLGKMMKLG----YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 114
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
T+ +++LI+ +A+ L + M+ GC+PN + ++++ + D AF +
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 445 SWKGNKMLGS---FGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
+ K+ F +S K + +A + I P TY++
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI---------RPNVVTYSS 225
Query: 502 LLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
L+ S + A L+++M ++PN +T++ LID A ++ M
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 619
I PD+ Y + I +A ++E M S + P+ TYNTL+K K V+
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK---RVE 342
Query: 620 QCLAIYQDMQKAG 632
++++M G
Sbjct: 343 DGTELFREMSHRG 355
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 203/454 (44%), Gaps = 47/454 (10%)
Query: 230 AYDALKKHLD---GPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
AY L K + P+ + +I L G ++ + + ++ P++ +NS++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 287 --VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
S D + L++ + M+ +K D+ +Y+ ++ + C G +D A ++KE+ E+ G
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETKG 258
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
+K V TY+++++ A W + DM S + N + ++ L++ G +++A
Sbjct: 259 -IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 405 IQLFEEMLLAGCEPNTQCFNIILHA-CVE----------------ACQYDRAFRFFHSWK 447
+L++EM+ G PN +N ++ C++ C D F K
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD-IVTFTSLIK 376
Query: 448 GNKMLGSFGEG---YNSNLKQGSIHNATT---VPNGFSNSQILSFTERF-------PFTP 494
G M+ +G + + K+G + NA T + GF S + E P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 495 TTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILID-ICGGTENVEGAIEI 551
TY LL + KAL +++ + + ++ +I+ +C G + VE A +
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK-VEDAWNL 495
Query: 552 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 611
S+ G+KP+V+ YT I + + +A L +M+ PN TYNTL++A +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 612 YGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
G + + + ++M+ G+ + ++ +I+
Sbjct: 556 DGDLTASAK---LIEEMKSCGFSADASSIKMVID 586
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 172/385 (44%), Gaps = 31/385 (8%)
Query: 276 PNIYVFNSLMN---VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
P+ FN+L+ + + + + ++++N G +PD+ +YN ++ C +G LA D
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 333 MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
+ ++++ +K DVFTYSTII A+ + +M + G+ + V ++SL+
Sbjct: 215 LLRKMEERN----VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
AG L ++M+ PN FN++L V+ + A +
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM------ 324
Query: 453 GSFGEGYNSN-LKQGSIHNATTVPNGFSNS-QILSFTERFPFTPTTSTYNTLLKACGSDY 510
G + N + ++ + + N S + +L R +P T+ +L+K Y
Sbjct: 325 --ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG----Y 378
Query: 511 YHAKALINEMKTV------GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 564
K + + MK GL N +T+SIL+ + ++ A E+ + M G+ PDV
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 565 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 624
+ Y + ++ ++AL ++E+++ ++ V Y T+++ K G +V+ +
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG---KVEDAWNL 495
Query: 625 YQDMQKAGYKPNDYYLEELIEEWCE 649
+ + G KPN +I C+
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCK 520
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 173/424 (40%), Gaps = 84/424 (19%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDA-C-------------- 253
+ + +I++ + D AL+ +++ +++ Y IID+ C
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 254 ------------------GLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD-- 291
GLC G + + +D+++++I PN+ FN L++V ++
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 292 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 351
L +Y+ M G+ P++ +YN L+ C+ R+ A +M L + D+
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIV 369
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
T++++IK + K +KV ++ G+ N V +S L+ +G ++ A +LF+EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 412 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM-LGSFGEGYNSNLKQGSIHN 470
+ G P+ + I+L + + ++A F + +KM LG I
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG--------------IVM 475
Query: 471 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQI 530
TT+ G G A L + G+ PN +
Sbjct: 476 YTTIIEGMCK--------------------------GGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 531 TWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
T++++I +C E I +L+ M + G P+ Y T I+ + + + L EE
Sbjct: 510 TYTVMISGLCKKGSLSEANI-LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 590 MKSC 593
MKSC
Sbjct: 569 MKSC 572
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 147/340 (43%), Gaps = 50/340 (14%)
Query: 203 LLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKS 262
++P+ I F ++ F K L A E Y + PN+ Y ++D + ++
Sbjct: 294 IVPNV-ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 263 RYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+ + ++ K +P+I F SL+ + + + +++ + GL + +Y+IL++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
C +G++ LA+++++E + S G L DV TY ++ D + AL++ D++ +
Sbjct: 413 FCQSGKIKLAEELFQE---MVSHGVLP-DVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 440
++L V ++++I G VE A LF + G +PN + +++
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC--------- 519
Query: 441 RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
K+GS+ A +L E P TYN
Sbjct: 520 -----------------------KKGSLSEANI---------LLRKMEEDGNAPNDCTYN 547
Query: 501 TLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDI 538
TL++A D + LI EMK+ G S + + ++ID+
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 12/264 (4%)
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 461
+ AI LF+EM+ + P+ F+ A Q++ F + N + + Y
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI---YTL 126
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINE 519
N+ +S +L + + P T+T+NTL+K A L++
Sbjct: 127 NIMINCFCRCCKTCFAYS---VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M G P+ +T++ +++ + + A+++L+ M + +K DV Y+T I
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYY 639
A++L++EM++ I + VTYN+L++ K G + + +DM PN
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG---KWNDGALLLKDMVSREIVPNVIT 300
Query: 640 LEELIEEWC-EGVIQDNREYQAEF 662
L++ + EG +Q+ E E
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEM 324
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 184/388 (47%), Gaps = 36/388 (9%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
P++ Y A+I+ GLC G+ + + + KI ++ +++++++ R + L
Sbjct: 203 PDLVTYGAVIN--GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N++ M N G++PD+ +Y+ L+ C GR A + ++ LE ++ +V T++++
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM--LER--KINPNVVTFNSL 316
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I FA A K+ +M ++ N V ++SLIN C H L ++A Q+F M+
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL-DEAQQIFTLMVSKD 375
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C P+ +N +++ +A + F ++G+ TT+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN-------------TVTYTTLI 422
Query: 476 NGF------SNSQILSFTERFP--FTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGL 525
+GF N+Q++ F + P TYNTLL + KA++ ++ +
Sbjct: 423 HGFFQASDCDNAQMV-FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
P+ T++I+ + VE ++ S+ G+KPDVIAY T I + ++A T
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 586 LYEEMKSCEIHPNWVTYNTLLKARSKYG 613
L+ +MK P+ TYNTL++A + G
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 170/380 (44%), Gaps = 43/380 (11%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+++ +I K R + AL + + P+++ Y ++I G + + + D
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 269 LLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+L +KI PN+ FNSL++ +++ L ++ M + P++ +YN L+ C+ R
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+D AQ ++ + + + DV TY+T+I F AK +++ DM G+ NTV
Sbjct: 361 LDEAQQIFTLMVSKDCLP----DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+++LI+ A + A +F++M+ G PN +N +L + + ++A F
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS-----------------NSQILSFTER 489
+ +KM Y N+ + A V +G+ N+ I F ++
Sbjct: 477 QKSKMEPDI---YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 490 F----PFT-----------PTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITW 532
+T P + TYNTL++A D A + LI EM++ + + T+
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Query: 533 SILIDICGGTENVEGAIEIL 552
++ D+ +G +E+L
Sbjct: 594 GLVTDMLHDGRLDKGFLEVL 613
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/511 (20%), Positives = 218/511 (42%), Gaps = 27/511 (5%)
Query: 150 RRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYAS---LLPH 206
R ++ + EAV+L + + + P +V+ S ++ + L + + +L
Sbjct: 38 RNALLHLKLDEAVDLFGEMVKSR-PFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV 96
Query: 207 AHILFC-NI-ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKS 262
+H L+ NI I+ +R L AL + K GP++ ++++ G C ++
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN--GFCHGNRISEA 154
Query: 263 RYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+ + ++ P+ F +L++ + + + + M G +PD+ +Y ++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
C G DLA ++ +++ G+++ DV YST+I + AL + +M + G
Sbjct: 215 LCKRGEPDLALNLLNKMEK----GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 440
+ + +SSLI+ + G A +L +ML PN FN ++ A + + A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 441 RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
+ F + + YNS + +H+ QI + P TYN
Sbjct: 331 KLFDEMIQRSIDPNIVT-YNSLINGFCMHDRLD-----EAQQIFTLMVSKDCLPDVVTYN 384
Query: 501 TLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 558
TL+ C L +M GL N +T++ LI + + A + K M
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 559 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 618
G+ P+++ Y T + ++ ++A+ ++E ++ ++ P+ TYN + + K G +V
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG---KV 501
Query: 619 QQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
+ ++ + G KP+ +I +C+
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 174/402 (43%), Gaps = 56/402 (13%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGD--FMKSRYIYEDLLN 271
+I K R + A+E + + + P+ Y Y ++D GLC + ++ + +++ +
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD--GLCKEERIDEAVLLLDEMQS 250
Query: 272 QKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
+ +P+ ++N L++ DLT + M G P+ +YN L+ C+ G++D
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A + L+ + S + DV TY T+I + A+++ M G +LN +S
Sbjct: 311 AVSL---LERMVSSKCIPNDV-TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 449
LI+ G E+A+ L+ +M GC+PN +++++
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC------------------ 408
Query: 450 KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD 509
++G + A + N S L P TY++L+K
Sbjct: 409 --------------REGKPNEAKEILNRMIASGCL---------PNAYTYSSLMKGFFKT 445
Query: 510 YYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
+A+ EM G S N+ +S+LID G V+ A+ + M GIKPD +AY
Sbjct: 446 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505
Query: 568 TTAIKVCVESKNFKQALTLYEEM---KSCEIHPNWVTYNTLL 606
++ IK + AL LY EM + + P+ VTYN LL
Sbjct: 506 SSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 158/385 (41%), Gaps = 44/385 (11%)
Query: 281 FNSLMNV------NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMY 334
FNS++NV R L + + N+ + P+ S+N+++KA C VD A +++
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF 210
Query: 335 KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 394
+ + + + D +TY T++ + A+ + +M+S G + + V ++ LI+
Sbjct: 211 RGMPERKCLP----DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266
Query: 395 CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG- 453
G + + +L + M L GC PN +N ++H + D+A +K +
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326
Query: 454 --SFGEGYNSNLKQGSIHNATTVPNGFS------NSQILSFTERFPFT------------ 493
++G N +KQ +A + + N I S F
Sbjct: 327 DVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 494 --------PTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 543
P Y+ L+ + AK ++N M G PN T+S L+ T
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
E A+++ K M G + Y+ I K+A+ ++ +M + I P+ V Y+
Sbjct: 447 LCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYS 506
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDM 628
+++K GS + L +Y +M
Sbjct: 507 SIIKGLCGIGS---MDAALKLYHEM 528
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 148/346 (42%), Gaps = 46/346 (13%)
Query: 335 KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 394
K K +G KL T S++I+ +A++ + K+ +R + ++ + A
Sbjct: 62 KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRA 121
Query: 395 CAHAGLVEQAIQLFEEMLLA-GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG 453
A L ++A+ LF M+ C+ + + FN +L+ + Y R F+
Sbjct: 122 YGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV------- 174
Query: 454 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT----------------PTTS 497
NSN+ N PNG S + ++ + F P
Sbjct: 175 -----VNSNM------NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 498 TYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
TY TL+ C + A L++EM++ G SP+ + +++LID ++ +++ +M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 556 GDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
G P+ + Y T I +C++ K +A++L E M S + PN VTY TL+ K
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGK-LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 615 VLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQA 660
+ + L+ M++ GY N + LI G+ ++ + +A
Sbjct: 343 ATDAVRLLS---SMEERGYHLNQHIYSVLI----SGLFKEGKAEEA 381
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ + +I+ K+R A+ ++++ N +IY +I G ++ ++
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 269 LLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ + PNI V++ L++ R+ I M G P+ +Y+ L+K G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ A ++KE+ R K F YS +I + A+ V M + G+ +TV
Sbjct: 448 CEEAVQVWKEMDK-TGCSRNK---FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLL---AGCEPNTQCFNIILHACVEACQYDRAFRFF 443
A+SS+I G ++ A++L+ EML +P+ +NI+L RA
Sbjct: 504 AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Query: 444 HS 445
+S
Sbjct: 564 NS 565
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 180/383 (46%), Gaps = 20/383 (5%)
Query: 268 DLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
D+ P+I+ FN +++ R+ + + + + M G +PD+ SY IL+ AG
Sbjct: 104 DMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAG 163
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALK-VKHDMRSAGVNLN 384
+V A +++ + + D + ++ A+ +A + V +++SA V L+
Sbjct: 164 KVTDAVEIWNAMIR----SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLS 219
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
TV +++LI+ AG +E+A L M GCEP+ +N++L+ + RA
Sbjct: 220 TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMA 279
Query: 445 SW-KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
+ L ++ YN LK+ H + P+ N + R F S Y+TL+
Sbjct: 280 EMVRSGIQLDAYS--YNQLLKR---HCRVSHPDKCYNFMVKEMEPR-GFCDVVS-YSTLI 332
Query: 504 KA-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
+ C S+ A L EM+ G+ N +T++ LI N A ++L M + G+
Sbjct: 333 ETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLS 392
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
PD I YTT + +S N +A ++ +M EI P+ ++YN+L+ + G V E
Sbjct: 393 PDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA--- 449
Query: 622 LAIYQDMQKAGYKPNDYYLEELI 644
+ +++DM+ P++ + +I
Sbjct: 450 IKLFEDMKGKECCPDELTFKFII 472
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
+++ M+ G+ ++ +Y L+KA G +A+ + ++ L L D Y+TI+
Sbjct: 347 LFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG----LSPDRIFYTTIL 402
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ A V +DM + + ++++SLI+ +G V +AI+LFE+M C
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC 462
Query: 418 PNTQCFNIILHACVEACQYDRAFR 441
P+ F I+ + + A++
Sbjct: 463 PDELTFKFIIGGLIRGKKLSAAYK 486
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 192/433 (44%), Gaps = 35/433 (8%)
Query: 219 GKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNI 278
GKRR+ Y L + L+ +Y G+ R I E + N ++ +
Sbjct: 117 GKRRNFQHDCSTYMTLIRCLEEARLY------------GEMY--RTIQEVVRNTYVSVSP 162
Query: 279 YVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKE 336
V + L+ R ++ L+++ + KP ++YN ++ G+ + ++Y E
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 337 LKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 396
+ + G D TYS +I + A+++ +M+ + +++L+
Sbjct: 223 MCN---EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
G VE+A+ LFEEM AGC P + ++ +A + D A+ F+ + +
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV 339
Query: 457 EGYNSNLKQ--GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK 514
+ +NL G + + N FS + + TPT +YNT++KA H
Sbjct: 340 --FLNNLMNILGKVGRVEELTNVFSEMGM------WRCTPTVVSYNTVIKALFESKAHVS 391
Query: 515 AL---INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
+ ++MK +SP++ T+SILID T VE A+ +L+ M + G P AY + I
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
++K ++ A L++E+K + + Y ++K +G ++ + + ++ +M+
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK---HFGKCGKLSEAVDLFNEMKNQ 508
Query: 632 GYKPNDYYLEELI 644
G P+ Y L+
Sbjct: 509 GSGPDVYAYNALM 521
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 175/417 (41%), Gaps = 39/417 (9%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
I + +IS + K SA+ +D +K + P IY ++ G K+ ++E+
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 269 LLNQKITPNIYVFNSLMN----VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
+ +P +Y + L+ D Y Y+ M GL PD+ N L+
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAY--GFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHD-MRSAGVNL 383
GRV+ +++ E+ + R V +Y+T+IK ++K + D M++ V+
Sbjct: 352 GRVEELTNVFSEM----GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+ +S LI+ VE+A+ L EEM G P + +++A +A +Y+ A F
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 444 HSWKGN----------KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 493
K N M+ FG K G + A + N N
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFG-------KCGKLSEAVDLFNEMKNQGS---------G 511
Query: 494 PTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 551
P YN L+ A +L+ +M+ G + + +I+++ T AIE+
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 552 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
+++ +GIKPD + Y T + + F++A + EMK + +TY+++L A
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 103/196 (52%), Gaps = 6/196 (3%)
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
P +C++I+ GK + +A E + LK++ + +Y +I G CG ++
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 264 YIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
++ ++ NQ P++Y +N+LM+ V + + ++ + M+ G + D+ S+NI+L
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGF 559
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
G A +M++ +KH +K D TY+T++ FA A +++ A ++ +M+ G
Sbjct: 560 ARTGVPRRAIEMFETIKH----SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 382 NLNTVAWSSLINACAH 397
+ + +SS+++A +
Sbjct: 616 EYDAITYSSILDAVGN 631
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 149/376 (39%), Gaps = 86/376 (22%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
AL+ ++ +K+ P +Y Y +I G G ++ Y+D+L +TP++ N+LMN
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 287 VNSR-----DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
+ + +LT N++ M P + SYN ++KA +++ H+
Sbjct: 347 ILGKVGRVEELT---NVFSEMGMWRCTPTVVSYNTVIKA------------LFESKAHVS 391
Query: 342 SVG----RLKLDV-----FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
V ++K D FTYS +I + + AL + +M G A+ SLI
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 393 NACAHA-----------------------------------GLVEQAIQLFEEMLLAGCE 417
NA A G + +A+ LF EM G
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
P+ +N ++ V+A + A N +L E N + I++ + NG
Sbjct: 512 PDVYAYNALMSGMVKAGMINEA---------NSLLRKMEE----NGCRADINSHNIILNG 558
Query: 478 FSNS-------QILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPN 528
F+ + ++ + P TYNTLL A + A ++ EMK G +
Sbjct: 559 FARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Query: 529 QITWSILIDICGGTEN 544
IT+S ++D G ++
Sbjct: 619 AITYSSILDAVGNVDH 634
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 184/449 (40%), Gaps = 34/449 (7%)
Query: 200 YASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDF 259
Y S+ P + ++ G+ + + AL + K P Y ++I G
Sbjct: 157 YVSVSP---AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQH 213
Query: 260 MKSRYIYEDLLNQ-KITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNI 316
K +Y ++ N+ P+ +++L++ + + ++ M++ ++P Y
Sbjct: 214 EKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTT 273
Query: 317 LLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM 376
LL G+V+ A D+++E+K V+TY+ +IK A A DM
Sbjct: 274 LLGIYFKVGKVEKALDLFEEMKR----AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA-CQ 435
G+ + V ++L+N G VE+ +F EM + C P +N ++ A E+
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 436 YDRAFRFFHSWKGNKMLGS------FGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 489
+F K + + S +GY K + A +L +
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGY---CKTNRVEKALL---------LLEEMDE 437
Query: 490 FPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG 547
F P + Y +L+ A G Y A L E+K + + ++++I G +
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE 497
Query: 548 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 607
A+++ M + G PDV AY + V++ +A +L +M+ + ++N +L
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 608 ARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
++ G ++ + +++ ++ +G KP+
Sbjct: 558 GFARTGV---PRRAIEMFETIKHSGIKPD 583
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 177/414 (42%), Gaps = 54/414 (13%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNI 298
P+ Y A+I+A G G + + + +D+L I P+ +N+L+N +S + L +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M + G+ PD+ ++NI+L A + A ++ +K +++ D T++ II
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG----AKVRPDTTTFNIIIY 291
Query: 359 VFADAKLWQMALKVKHDMRS--AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
+ AL + + MR A + V ++S+++ + G +E +FE M+ G
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 351
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
+PN +N ++ A H G L G+ +KQ I
Sbjct: 352 KPNIVSYNALMGAYA-----------VHGMSGTA-LSVLGD-----IKQNGI-------- 386
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSI 534
P +Y LL + G KA + M+ PN +T++
Sbjct: 387 ----------------IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 430
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
LID G + A+EI + M GIKP+V++ T + C SK T+ +S
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 490
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
I+ N YN+ + + Y + E+++ +A+YQ M+K K + LI C
Sbjct: 491 INLNTAAYNSAIGS---YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 29/346 (8%)
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+I +N + D+ YN++++ VD A+ ++ E++ K D TY +I
Sbjct: 134 KIQKNYCARNDI--YNMMIRLHARHNWVDQARGLFFEMQKWS----CKPDAETYDALINA 187
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
A W+ A+ + DM A + + +++LINAC +G +A+++ ++M G P+
Sbjct: 188 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 247
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPN 476
NI+L A QY +A +F KG K+ +F K G A + N
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTL--LKACGSDYYHAKALINEMKTVGLSPNQITWSI 534
+R P T+ ++ L + + + +A+ M GL PN ++++
Sbjct: 308 SMRE-------KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 535 LIDICGGTENVEG----AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 590
L+ G V G A+ +L + GI PDV++YT + S+ +A ++ M
Sbjct: 361 LM----GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 591 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ PN VTYN L+ A YGS + + + I++ M++ G KPN
Sbjct: 417 RKERRKPNVVTYNALIDA---YGSNGFLAEAVEIFRQMEQDGIKPN 459
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 174/407 (42%), Gaps = 18/407 (4%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
++S + R AL ++ +K P+ + II G ++ ++ + ++
Sbjct: 254 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 313
Query: 274 IT--PNIYVFNSLMNVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
P++ F S+M++ S ++ +++ M GLKP++ SYN L+ A V G
Sbjct: 314 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 373
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A + ++K + DV +Y+ ++ + ++ A +V MR N V ++
Sbjct: 374 ALSVLGDIKQ----NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA---CQYDRAFRFFHSW 446
+LI+A G + +A+++F +M G +PN +L AC + D S
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR 489
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 506
N ++ S + + A + ++ + + F + S
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM------ 543
Query: 507 GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
S Y A + + EM+ + + + +S ++ V A I M AG +PDVIA
Sbjct: 544 -SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 602
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
YT+ + S+ + +A L+ EM++ I P+ + + L++A +K G
Sbjct: 603 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 186/426 (43%), Gaps = 41/426 (9%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
++ ++P C +++ +G+ R A E + ++K PN+ Y A+IDA G G
Sbjct: 381 IKQNGIIPDVVSYTC-LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 258 DFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIM---QNLGLKPDMTSY 314
++ I+ + I PN+ +L+ SR +N+ ++ Q+ G+ + +Y
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS-KKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
N + + A ++ A +Y+ ++ ++K D T++ +I + A+
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRK----KKVKADSVTFTILISGSCRMSKYPEAISYLK 554
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
+M + L +SS++ A + G V +A +F +M +AGCEP+ + +LHA +
Sbjct: 555 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 614
Query: 435 QYDRAFRFFHSWKGNKM------LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
++ +A F + N + + +N K G N + + +I
Sbjct: 615 KWGKACELFLEMEANGIEPDSIACSALMRAFN---KGGQPSNVFVLMDLMREKEI----- 666
Query: 489 RFPFTPTTSTYNTLLKACGS--DYYHAKALINEMK------TVGLSPNQITWSILIDICG 540
PF T + + + AC + ++ A LI M ++GL+ NQ ++ + G
Sbjct: 667 --PF--TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-NQ-----MLHLFG 716
Query: 541 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 600
+ VE +++ + +G+ ++ Y ++ + N+++ + + E M I P+
Sbjct: 717 KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQ 776
Query: 601 TYNTLL 606
Y ++
Sbjct: 777 MYRDII 782
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 428 HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT 487
C+E C F K K + + YN ++ + HN G +
Sbjct: 120 RGCIELC-----VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARG-----LFFEM 169
Query: 488 ERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 545
+++ P TY+ L+ A G + A L+++M ++P++ T++ LI+ CG + N
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 546 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 605
A+E+ K M D G+ PD++ + + + + +AL+ +E MK ++ P+ T+N +
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 606 LKARSKYGSVLEVQQCLAIYQDMQK 630
+ SK G + Q L ++ M++
Sbjct: 290 IYCLSKLG---QSSQALDLFNSMRE 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/391 (19%), Positives = 159/391 (40%), Gaps = 49/391 (12%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ F +I+ + + ++ + ++A+ PN+ Y A++ A + G + + D
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 380
Query: 269 LLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ I P++ + L+N SR ++ +M+ KP++ +YN L+ A G
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ A +++++++ +K +V + T++ + +K V +S G+NLNT
Sbjct: 441 LAEAVEIFRQMEQ----DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
A++S I + +A +E+AI L++ M + ++ F I++ +Y A +
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY---- 552
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 506
L E T Y+++L A
Sbjct: 553 -------------------------------------LKEMEDLSIPLTKEVYSSVLCAY 575
Query: 507 G--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 564
A+++ N+MK G P+ I ++ ++ +E A E+ M GI+PD
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 565 IAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
IA + ++ + L + M+ EI
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 199/425 (46%), Gaps = 35/425 (8%)
Query: 208 HILFCN-IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRY 264
+I+F N II + K D+ +A + LK P + + +I+ G C GDF+ S
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMIN--GFCKEGDFVASDR 296
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSR---DLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+ ++ + + +++ N++++ R + +I I+ N KPD+ +YNIL+
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN-DCKPDVATYNILINRL 355
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C G+ ++A E S L + +Y+ +I+ + +K + +A K+ M G
Sbjct: 356 CKEGKKEVAVGFLDE----ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
+ V + LI+ +G ++ A+ + +++ G P+ +N+++ + ++ A
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA-- 469
Query: 442 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTP 494
K+L F E + N+ + AT + +GF S ++ S +
Sbjct: 470 --------KLL--FSEMLDRNILPDAYVYATLI-DGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 495 TTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
+N ++K C S A A +N M L P++ T+S +ID +++ AI+I
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+ M KP+V+ YT+ I +FK A ++EM+ ++ PN VTY TL+++ +K
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 613 GSVLE 617
S LE
Sbjct: 639 SSTLE 643
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 58/313 (18%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
P+ IY ++ GLC G F+ ++ ++ ++L++ I P+ YV+ +L++ + S D
Sbjct: 448 PDAAIYNMLMS--GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA-------------------------- 330
++ + G+K D+ +N ++K C +G +D A
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 331 ---QDMYKELKHLESV--GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
QDM +K + + K +V TY+++I F ++MA + +M+ + N
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNV 625
Query: 386 VAWSSLINACA-HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC---------- 434
V +++LI + A + +E+A+ +E M+ C PN FN +L V+
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG 685
Query: 435 ----QYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF 490
Q FFH K + YNS L +H F + + +
Sbjct: 686 SNHGQSSLFSEFFHRMKSDGW-SDHAAAYNSALVCLCVHGMVKTACMFQDKMV-----KK 739
Query: 491 PFTPTTSTYNTLL 503
F+P ++ +L
Sbjct: 740 GFSPDPVSFAAIL 752
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 133/321 (41%), Gaps = 16/321 (4%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G P++ YN ++ C G ++ A ++KELK + L+ T+ T+I F
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLE----TFGTMINGFCKEGD 290
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
+ + ++ +++ G+ ++ +++I+A G + ++ C+P+ +NI
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI 350
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF--SNSQI 483
+++ + + + A F ++ + NL + A + ++ +
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPN-------NLSYAPLIQAYCKSKEYDIASKLL 403
Query: 484 LSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV--GLSPNQITWSILIDICGG 541
L ER P TY L+ + A+ ++K + G+SP+ +++L+
Sbjct: 404 LQMAER-GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 542 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
T A + M D I PD Y T I + S +F +A ++ + + V
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 602 YNTLLKARSKYGSVLEVQQCL 622
+N ++K + G + E C+
Sbjct: 523 HNAMIKGFCRSGMLDEALACM 543
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 176/414 (42%), Gaps = 54/414 (13%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNI 298
P+ Y A+I+A G G + + + +D+L I P+ +N+L+N +S + L +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M + G+ PD+ ++NI+L A + A ++ +K +++ D T++ II
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG----AKVRPDTTTFNIIIY 159
Query: 359 VFADAKLWQMALKVKHDMRS--AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
+ AL + + MR A + V ++S+++ + G +E +FE M+ G
Sbjct: 160 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 219
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
+PN +N ++ A H G L G+ +KQ I
Sbjct: 220 KPNIVSYNALMGAYA-----------VHGMSGTA-LSVLGD-----IKQNGI-------- 254
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSI 534
P +Y LL + G KA + M+ PN +T++
Sbjct: 255 ----------------IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNA 298
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
LID G + A+EI + M GIKP+V++ T + C SK T+ +S
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 358
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
I+ N YN+ A Y + E+++ +A+YQ M+K K + LI C
Sbjct: 359 INLNTAAYNS---AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 29/346 (8%)
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+I +N + D+ YN++++ VD A+ ++ E++ K D TY +I
Sbjct: 2 KIQKNYCARNDI--YNMMIRLHARHNWVDQARGLFFEMQKWS----CKPDAETYDALINA 55
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
A W+ A+ + DM A + + +++LINAC +G +A+++ ++M G P+
Sbjct: 56 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 115
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPN 476
NI+L A QY +A +F KG K+ +F K G A + N
Sbjct: 116 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTL--LKACGSDYYHAKALINEMKTVGLSPNQITWSI 534
+R P T+ ++ L + + + +A+ M GL PN ++++
Sbjct: 176 SMRE-------KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 535 LIDICGGTENVEG----AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 590
L+ G V G A+ +L + GI PDV++YT + S+ +A ++ M
Sbjct: 229 LM----GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 591 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ PN VTYN L+ A YGS + + + I++ M++ G KPN
Sbjct: 285 RKERRKPNVVTYNALIDA---YGSNGFLAEAVEIFRQMEQDGIKPN 327
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 174/407 (42%), Gaps = 18/407 (4%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
++S + R AL ++ +K P+ + II G ++ ++ + ++
Sbjct: 122 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 274 IT--PNIYVFNSLMNVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
P++ F S+M++ S ++ +++ M GLKP++ SYN L+ A V G
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 241
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A + ++K + DV +Y+ ++ + ++ A +V MR N V ++
Sbjct: 242 ALSVLGDIKQ----NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 297
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA---CQYDRAFRFFHSW 446
+LI+A G + +A+++F +M G +PN +L AC + D S
Sbjct: 298 ALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR 357
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 506
N ++ S + + A + ++ + + F + S
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM------ 411
Query: 507 GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
S Y A + + EM+ + + + +S ++ V A I M AG +PDVIA
Sbjct: 412 -SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 470
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
YT+ + S+ + +A L+ EM++ I P+ + + L++A +K G
Sbjct: 471 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 186/426 (43%), Gaps = 41/426 (9%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
++ ++P C +++ +G+ R A E + ++K PN+ Y A+IDA G G
Sbjct: 249 IKQNGIIPDVVSYTC-LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 258 DFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIM---QNLGLKPDMTSY 314
++ I+ + I PN+ +L+ SR +N+ ++ Q+ G+ + +Y
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS-KKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
N + + A ++ A +Y+ ++ ++K D T++ +I + A+
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRK----KKVKADSVTFTILISGSCRMSKYPEAISYLK 422
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
+M + L +SS++ A + G V +A +F +M +AGCEP+ + +LHA +
Sbjct: 423 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 482
Query: 435 QYDRAFRFFHSWKGNKM------LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
++ +A F + N + + +N K G N + + +I
Sbjct: 483 KWGKACELFLEMEANGIEPDSIACSALMRAFN---KGGQPSNVFVLMDLMREKEI----- 534
Query: 489 RFPFTPTTSTYNTLLKACGS--DYYHAKALINEMK------TVGLSPNQITWSILIDICG 540
PF T + + + AC + ++ A LI M ++GL+ NQ ++ + G
Sbjct: 535 --PF--TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-NQ-----MLHLFG 584
Query: 541 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 600
+ VE +++ + +G+ ++ Y ++ + N+++ + + E M I P+
Sbjct: 585 KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQ 644
Query: 601 TYNTLL 606
Y ++
Sbjct: 645 MYRDII 650
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/391 (19%), Positives = 159/391 (40%), Gaps = 49/391 (12%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ F +I+ + + ++ + ++A+ PN+ Y A++ A + G + + D
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Query: 269 LLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ I P++ + L+N SR ++ +M+ KP++ +YN L+ A G
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ A +++++++ +K +V + T++ + +K V +S G+NLNT
Sbjct: 309 LAEAVEIFRQMEQ----DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
A++S I + +A +E+AI L++ M + ++ F I++ +Y A +
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY---- 420
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 506
L E T Y+++L A
Sbjct: 421 -------------------------------------LKEMEDLSIPLTKEVYSSVLCAY 443
Query: 507 G--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 564
A+++ N+MK G P+ I ++ ++ +E A E+ M GI+PD
Sbjct: 444 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 503
Query: 565 IAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
IA + ++ + L + M+ EI
Sbjct: 504 IACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 159/356 (44%), Gaps = 51/356 (14%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M G +P++ +Y +++ C G +DLA ++ +++ +++ +V YST+I
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME----AAKIEANVVIYSTVIDSLC 271
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ AL + +M + GV N + +SSLI+ + A +L +M+ PN
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
FN ++ A V K+G + A + +
Sbjct: 332 TFNALIDAFV--------------------------------KEGKLVEAEKLYDEMIKR 359
Query: 482 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 539
I P TY++L+ C D AK + M + PN +T++ LI+
Sbjct: 360 SI---------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
+ ++ +E+ + M G+ + + YTT I ++++ A ++++M S +HPN
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 600 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQD 654
+TYNTLL K G ++++ + +++ +Q++ +P Y +IE C+ G ++D
Sbjct: 471 MTYNTLLDGLCKNG---KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 113/208 (54%), Gaps = 8/208 (3%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN---VNSRDLTYTLN 297
PN+ + A+IDA G +++ +Y++++ + I P+I+ ++SL+N ++ R L +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR-LDEAKH 386
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++++M + P++ +YN L+ C A R+D ++++E+ VG + TY+T+I
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG----NTVTYTTLI 442
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
F A+ A V M S GV+ N + +++L++ G +E+A+ +FE + + E
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHS 445
P +NI++ +A + + + F S
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 165/366 (45%), Gaps = 36/366 (9%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
PN+ Y +++ GLC GD + + + KI N+ +++++++ R L
Sbjct: 223 PNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
N++ M+N G++P++ +Y+ L+ C R A + ++ +E ++ +V T++ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM--IER--KINPNVVTFNAL 336
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I F A K+ +M ++ + +SSLIN C H L ++A +FE M+
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISKD 395
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C PN +N +++ +A + D F ++ G+ TT+
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV-------------GNTVTYTTLI 442
Query: 476 NGF------SNSQILSFTERFP--FTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGL 525
+GF N+Q++ F + P TYNTLL + KA++ ++ +
Sbjct: 443 HGFFQARDCDNAQMV-FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
P T++I+I+ VE ++ S+ G+KPDVI Y T I ++A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 586 LYEEMK 591
L+ +M+
Sbjct: 562 LFRKMR 567
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 187/463 (40%), Gaps = 73/463 (15%)
Query: 225 ISALEAYDA--LKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFN 282
ISA E + A + K L+ P + Y +++ G K+ +Y ++ + I P+IY F
Sbjct: 453 ISAAEGFMAEMINKKLE-PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 283 SLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHL 340
+L++ R + + ++ M +KP+ +YN++++ C G + A + KE+
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 341 ESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL 400
V D ++Y +I A + LN + ++ L++ G
Sbjct: 572 GIVP----DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 401 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 460
+E+A+ + +EM+ G + + C+ +++ ++ DR F G E ++
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK--HKDRKLFF----------GLLKEMHD 675
Query: 461 SNLKQGSIHNATTVPNGFSNSQILSFTERFPF---------TPTTSTYNTLLKA-CGSDY 510
LK + + + + S+ F E F P TY ++ C + +
Sbjct: 676 RGLKPDDVIYTSMID---AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 511 YH-AKALINEMKTVGLSPNQITWSILIDICGGTE-------------------------- 543
+ A+ L ++M+ V PNQ+T+ +DI E
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 544 ---------NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
+E A E++ M G+ PD I YTT I + K+A+ L+ M
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPND 637
I P+ V YNTL+ G E+ + + +M + G PN+
Sbjct: 853 IRPDRVAYNTLIHGCCVAG---EMGKATELRNEMLRQGLIPNN 892
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 191/463 (41%), Gaps = 44/463 (9%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ +C ++ K ++ LE D + P+ ++++ G ++ + +
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+++ ++PN++V+N+L++ R ++ M +GL+P+ +Y+IL+ C G+
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 327 VDLAQDMYKELKHL------------------------------ESVG-RLKLDVFTYST 355
+D A E+ E + +L+ V TY++
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
++ + AL++ H+M G+ + +++L++ AGL+ A++LF EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
+PN +N+++ E +AF F K + G ++ + IH
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFL------KEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWS 533
+ + Y LL + +AL EM G+ + + +
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
+LID ++ + +LK M D G+KPD + YT+ I ++ +FK+A +++ M +
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
PN VTY ++ K G V E + + MQ PN
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAE---VLCSKMQPVSSVPN 751
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 166/395 (42%), Gaps = 31/395 (7%)
Query: 265 IYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
++ D+++ I P++Y++ ++ +DL+ + M+ G ++ YN+L+ C
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
+V A + K+L + LK DV TY T++ + +++ L++ +M +
Sbjct: 274 KKQKVWEAVGIKKDLAGKD----LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ A SSL+ G +E+A+ L + ++ G PN +N ++ + + ++ A
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 443 FHSWKGNKMLGSFGEGYNS---------NLKQGSIHNATTVPNGFSNSQILSFTERFPFT 493
F +G G N ++G + A + ++ + +
Sbjct: 390 FDR------MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL-----KLSVY 438
Query: 494 PTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 553
P S N K D A+ + EM L P +T++ L+ + A+ +
Sbjct: 439 PYNSLINGHCKF--GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
M GI P + +TT + + + A+ L+ EM + PN VTYN +++ + G
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 614 SVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
++ + ++M + G P+ Y LI C
Sbjct: 557 ---DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 180/412 (43%), Gaps = 68/412 (16%)
Query: 259 FMKSRYIYEDLLNQKIT-------PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKP 309
+++SR + + +L K+ P + ++L++ V R + ++ M ++G++P
Sbjct: 166 YVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRP 225
Query: 310 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK-VFADAKLWQM 368
D+ Y ++++ C + A++M + H+E+ G +++ Y+ +I + K+W+
Sbjct: 226 DVYIYTGVIRSLCELKDLSRAKEM---IAHMEATG-CDVNIVPYNVLIDGLCKKQKVWE- 280
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
A+ +K D+ + + V + +L+ E +++ +EML
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML---------------- 324
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
RF S + S EG K+G I A L+ +
Sbjct: 325 ----------CLRFSPS---EAAVSSLVEGLR---KRGKIEEA------------LNLVK 356
Query: 489 R---FPFTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE 543
R F +P YN L+ + C G ++ A+ L + M +GL PN +T+SILID+
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
++ A+ L M D G+K V Y + I + + A EM + ++ P VTY
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE-WCEGVIQD 654
+L+ Y S ++ + L +Y +M G P+ Y L+ + G+I+D
Sbjct: 477 SLMGG---YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 169/429 (39%), Gaps = 37/429 (8%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ + +++ + + + AL Y + P++Y + ++ G + ++ +
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ + PN +N ++ D++ + M G+ PD SY L+ C+ G+
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
A+ L G +L+ Y+ ++ F + AL V +M GV+L+ V
Sbjct: 593 ASEAKVFVDGLHK----GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+ LI+ + L +EM G +P+ + ++ A + + AF +
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 447 KGNKMLG---SFGEGYNSNLKQGSIHNA----------TTVPNGFSNSQILSFTERFP-- 491
+ ++ N K G ++ A ++VPN + L +
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD 768
Query: 492 --------------FTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSIL 535
T+TYN L++ C A LI M G+SP+ IT++ +
Sbjct: 769 MQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
I+ +V+ AIE+ SM + GI+PD +AY T I C + +A L EM +
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Query: 596 HPNWVTYNT 604
PN T T
Sbjct: 889 IPNNKTSRT 897
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 193/447 (43%), Gaps = 40/447 (8%)
Query: 207 AHILFCNI--------ISEFGKRRDLISALEAYDA---LKKHLD----GPNMYIYRAIID 251
A LFC++ I +F + I+ L Y+A L +HL+ ++Y + +ID
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 252 ACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQ------NL 305
C + ++ P+I F SL+N + Y+ M L
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN----GFCHVNRFYEAMSLVDQIVGL 178
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G +P++ YN ++ + C G+V+ A D+ LKH++ +G ++ DV TY+++I +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDV---LKHMKKMG-IRPDVVTYNSLITRLFHSGT 234
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
W ++ ++ DM G++ + + +S+LI+ G + +A + + EM+ PN +N
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
+++ D A + + G F N A V +G +IL
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSK---GFFPNAVTYNTLINGYCKAKRVDDGM---KILC 348
Query: 486 FTERFPFTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE 543
R T TYNTL + C + A+ ++ M + G+ P+ T++IL+D
Sbjct: 349 VMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG 408
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
+ A+ L+ + + +I Y IK ++ + A L+ + + P+ +TY
Sbjct: 409 KIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYI 468
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDMQK 630
T++ + E + +Y+ MQK
Sbjct: 469 TMMIGLRRKRLWREAHE---LYRKMQK 492
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 134/326 (41%), Gaps = 35/326 (10%)
Query: 337 LKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 396
+HLE +G + D+++++T+I F +AL M G + V + SL+N
Sbjct: 102 FRHLEMLG-ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF---------------- 440
H +A+ L ++++ G EPN +N I+ + E Q + A
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Query: 441 -------RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF--- 490
R FHS + + I + + Q+L +++
Sbjct: 221 TYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280
Query: 491 ---PFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENV 545
P TYN+L+ C AK ++N + + G PN +T++ LI+ + V
Sbjct: 281 IQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRV 340
Query: 546 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 605
+ ++IL M G+ D Y T + ++ F A + M SC +HP+ T+N L
Sbjct: 341 DDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Query: 606 LKARSKYGSVLEVQQCLAIYQDMQKA 631
L +G ++ + L +D+QK+
Sbjct: 401 LDGLCDHG---KIGKALVRLEDLQKS 423
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 25/261 (9%)
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
H+ A+ LF +M + P+ F+ +L A + +Y+ F + MLG
Sbjct: 56 HSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE---MLGI-- 110
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFT-------ERFPFTPTTSTYNTLLKA-CGS 508
+++ TT+ + F LS + F P+ T+ +L+ C
Sbjct: 111 --------SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 509 D-YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
+ +Y A +L++++ +G PN + ++ +ID V A+++LK M GI+PDV+ Y
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY 222
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
+ I S + + + +M I P+ +T++ L+ K G +LE ++ Y +
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK---QYNE 279
Query: 628 MQKAGYKPNDYYLEELIEEWC 648
M + PN LI C
Sbjct: 280 MIQRSVNPNIVTYNSLINGLC 300
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 160/376 (42%), Gaps = 34/376 (9%)
Query: 290 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 349
R + L I++ M + G+K + S I+++ C G V+ ++ + KE SV +K +
Sbjct: 203 RRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEF----SVKGIKPE 258
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 409
+TY+TII + + + V M+ GV N V ++ L+ G + A +LF+
Sbjct: 259 AYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318
Query: 410 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQG 466
EM G E + + ++ RAF F + S +G + K G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 467 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE------- 519
+ A + N + + T +NTL+ D Y K +++E
Sbjct: 379 EMGAAEILMNEMQSKGV---------NITQVVFNTLI-----DGYCRKGMVDEASMIYDV 424
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M+ G + T + + + + A + L M + G+K ++YT I V + N
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYY 639
++A L+ EM S + PN +TYN ++ A K G + E ++ A +M+ G P+ Y
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA---NMEANGMDPDSYT 541
Query: 640 LEELIEEWCEGVIQDN 655
LI C I DN
Sbjct: 542 YTSLIHGEC---IADN 554
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 189/430 (43%), Gaps = 41/430 (9%)
Query: 220 KRRDLISALEAYDALKKHLD-GPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITP 276
KRR + LE + ++ +D G + +Y I GLC G+ KS+ + ++ + I P
Sbjct: 201 KRRRIDLCLEIF---RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKP 257
Query: 277 NIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMY 334
Y +N+++N V RD + + ++M+ G+ + +Y +L++ G++ A+ ++
Sbjct: 258 EAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF 317
Query: 335 KELKH--LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
E++ +ES DV Y+++I + A + ++ G++ ++ + +LI
Sbjct: 318 DEMRERGIES------DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
+ G + A L EM G FN ++ D A + +
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ---- 427
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP-------TTSTYNTLLKA 505
+G+ Q + T+ + F+ + +++ F +T +Y L+
Sbjct: 428 ----KGF-----QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDV 478
Query: 506 -CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
C + AK L EM + G+ PN IT++++I ++ A ++ +M G+ PD
Sbjct: 479 YCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD 538
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 623
YT+ I + N +A+ L+ EM + N VTY ++ SK G + +
Sbjct: 539 SYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAG---KSDEAFG 595
Query: 624 IYQDMQKAGY 633
+Y +M++ GY
Sbjct: 596 LYDEMKRKGY 605
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 153/357 (42%), Gaps = 52/357 (14%)
Query: 219 GKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNI 278
GK D A + +D +++ ++++Y ++I G+ ++ ++++L + ++P+
Sbjct: 308 GKMSD---AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 279 YVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKE 336
Y + +L++ + ++ + MQ+ G+ +N L+ C G VD A +Y
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD- 423
Query: 337 LKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 396
+E G + DVFT +TI F K + A + M GV L+TV++++LI+
Sbjct: 424 --VMEQKG-FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYC 480
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
G VE+A +LF EM G +PN +N++++A C
Sbjct: 481 KEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA---YC---------------------- 515
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAK 514
KQG I A ++ + E P + TY +L+ C +D A
Sbjct: 516 -------KQGKIKEA---------RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 515 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
L +EM GL N +T++++I + A + M G D YT I
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/301 (18%), Positives = 118/301 (39%), Gaps = 46/301 (15%)
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+ +V+ D +++ L+V M G++++ + + A ++ +++F M+ +G
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
+ I++ ++G + + +
Sbjct: 220 VKITVYSLTIVVEGLC--------------------------------RRGEVEKSKKLI 247
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWS 533
FS I P TYNT++ A D+ + ++ MK G+ N++T++
Sbjct: 248 KEFSVKGI---------KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYT 298
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
+L+++ + A ++ M + GI+ DV YT+ I N K+A L++E+
Sbjct: 299 LLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK 358
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQ 653
+ P+ TY L+ K G E+ + +MQ G LI+ +C +
Sbjct: 359 GLSPSSYTYGALIDGVCKVG---EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 654 D 654
D
Sbjct: 416 D 416
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 164/384 (42%), Gaps = 53/384 (13%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G KP+ +YN L+ + GR + ++ ++ G + D TY T+I + A A
Sbjct: 389 GCKPNTVTYNRLIHS---YGRANYLKEAMNVFNQMQEAG-CEPDRVTYCTLIDIHAKAGF 444
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
+A+ + M+ AG++ +T +S +IN AG + A +LF EM+ GC PN FNI
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
++ +A Y+ A + + + NA
Sbjct: 505 MIALHAKARNYETALKLYRD----------------------MQNAG------------- 529
Query: 486 FTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 543
F P TY+ +++ G + A+ + EM+ P++ + +L+D+ G
Sbjct: 530 ------FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
NV+ A + ++M AG++P+V + + + +A L + M + +HP+ TY
Sbjct: 584 NVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYT 643
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFS 663
LL + S ++ C Q M +G+ P +L ++ +G Q R++ + F
Sbjct: 644 LLLSCCTDARSNFDMGFC---GQLMAVSGH-PAHMFLLKMPPAGPDG--QKVRDHVSNFL 697
Query: 664 SIKKSELERPQSLLLEKIAAHLLK 687
SE + L++ + L K
Sbjct: 698 DFMHSEDRESKRGLMDAVVDFLHK 721
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ +C +I K L A++ Y +++ P+ + Y II+ G G + ++ +
Sbjct: 430 VTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCE 489
Query: 269 LLNQKITPNIYVFNSL--MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
++ Q TPN+ FN + ++ +R+ L +Y+ MQN G +PD +Y+I+++ G
Sbjct: 490 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
++ A+ ++ E++ V D Y ++ ++ A A + M AG+ N
Sbjct: 550 LEEAEGVFAEMQRKNWV----PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA-CQYDRAF 440
+SL++ + +A L + ML G P+ Q + ++L C +A +D F
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGF 660
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 107/235 (45%), Gaps = 33/235 (14%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQI 301
+ Y ++ G F + + ++++ PN +N L++ R L +N++
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK----------------------H 339
MQ G +PD +Y L+ AG +D+A DMY+ ++ H
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 340 LESVGRL---------KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
L + RL ++ T++ +I + A A+ ++ ALK+ DM++AG + V +S
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
++ H G +E+A +F EM P+ + +++ +A D+A++++ +
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQA 594
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 134/327 (40%), Gaps = 60/327 (18%)
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
R G + +++++ A + +L +EM+ GC+PNT +N ++H+ A
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 437 DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTT 496
A F N+M + E P
Sbjct: 411 KEAMNVF-----NQMQEAGCE------------------------------------PDR 429
Query: 497 STYNTLLKACGSDYYHAKA--------LINEMKTVGLSPNQITWSILIDICGGTENVEGA 548
TY TL+ HAKA + M+ GLSP+ T+S++I+ G ++ A
Sbjct: 430 VTYCTLID------IHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 549 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
+ M G P+++ + I + +++N++ AL LY +M++ P+ VTY+ +++
Sbjct: 484 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 543
Query: 609 RSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDN--REYQAEFSSIK 666
G + E + ++ +MQ+ + P++ L++ W + D + YQA +
Sbjct: 544 LGHCGFLEEAE---GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 667 KSELERPQSLLLEKIAAHLLKRVADIL 693
+ + SLL + H + ++L
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLL 627
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 189/437 (43%), Gaps = 20/437 (4%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLN 271
I+ F +R L AL + K GP++ ++++ G C ++ + + ++
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN--GFCHGNRISEAVALVDQMVE 173
Query: 272 QKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
P+ F +L++ + + + + M G +PD+ +Y ++ C G DL
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A ++ +++ G+++ DV Y+TII K A + + M + G+ + ++
Sbjct: 234 ALNLLNKMEK----GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 449
LI+ + G A +L +ML P+ FN ++ A V+ + A + + +
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 450 KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--G 507
K YN+ +K V G ++ + T TY TL+
Sbjct: 350 KHCFPDVVAYNTLIK--GFCKYKRVEEGM---EVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 508 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
D +A+ + +M + G+ P+ +T++IL+D NVE A+ + + M +K D++ Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
TT I+ ++ + L+ + + PN VTY T++ + G E A++ +
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD---ALFVE 521
Query: 628 MQKAGYKPNDYYLEELI 644
M++ G PN LI
Sbjct: 522 MKEDGPLPNSGTYNTLI 538
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 173/415 (41%), Gaps = 69/415 (16%)
Query: 251 DACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN----VNSRDLTYTLNIYQIMQNLG 306
DA GL GD +KSR P+I F+ L++ +N DL +L + MQNLG
Sbjct: 58 DAIGLFGDMVKSRPF----------PSIVEFSKLLSAIAKMNKFDLVISLG--EQMQNLG 105
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+ ++ +Y+I + C ++ LA + ++ L + T ++++ F
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG----YGPSIVTLNSLLNGFCHGNRI 161
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
A+ + M G +TV +++L++ +A+ L E M++ GC+P+ + +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 486
++ + + D A NKM ++G I +
Sbjct: 222 INGLCKRGEPDLALNLL-----NKM------------EKGKIEADVVI------------ 252
Query: 487 TERFPFTPTTSTYNTLLKACGSDYYH---AKALINEMKTVGLSPNQITWSILIDICGGTE 543
YNT++ Y H A L N+M+T G+ P+ T++ LI
Sbjct: 253 ------------YNTIIDGL-CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTY 602
A +L M + I PD++ + I V+ +A LY+EM KS P+ V Y
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNRE 657
NTL+K KY V++ + ++++M + G N LI + + DN +
Sbjct: 360 NTLIKGFCKYK---RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 31/345 (8%)
Query: 280 VFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH 339
V N L DL LN+ M+ ++ D+ YN ++ C +D A D++ ++
Sbjct: 221 VINGLCKRGEPDLA--LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-- 276
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
E+ G +K DVFTY+ +I + W A ++ DM +N + V +++LI+A G
Sbjct: 277 -ETKG-IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 400 LVEQAIQLFEEMLLAG-CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 458
+ +A +L++EM+ + C P+ +N ++ C+Y R ++ G G
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG---FCKYKRVEEGMEVFREMSQRGLVG-- 389
Query: 459 YNSNLKQGSIHNATTVPNGF------SNSQILSFTERFP--FTPTTSTYNTLLKA-CGSD 509
+ TT+ +GF N+Q++ F + P TYN LL C +
Sbjct: 390 --------NTVTYTTLIHGFFQARDCDNAQMV-FKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 510 YYHAKALINE-MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
++ E M+ + + +T++ +I+ VE ++ S+ G+KP+V+ YT
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
T + ++A L+ EMK PN TYNTL++AR + G
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 167/402 (41%), Gaps = 66/402 (16%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE--DLLN 271
+I+ KR + AL + ++K ++ IY IID GLC K +++ + DL N
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID--GLC----KYKHMDDAFDLFN 274
Query: 272 Q----KITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
+ I P+++ +N L++ N + + M + PD+ +N L+ A G
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 326 RVDLAQDMYKEL---KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
++ A+ +Y E+ KH DV Y+T+IK F K + ++V +M G+
Sbjct: 335 KLVEAEKLYDEMVKSKHCFP------DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
NTV +++LI+ A + A +F++M+ G P+ +NI+L
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL--------------- 433
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
+G +N G++ A V + ++ TY T+
Sbjct: 434 --------------DGLCNN---GNVETALVV---------FEYMQKRDMKLDIVTYTTM 467
Query: 503 LKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
++A C + L + G+ PN +T++ ++ E A + M + G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
P+ Y T I+ + + + L +EM+SC + T+
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 203/512 (39%), Gaps = 109/512 (21%)
Query: 269 LLNQKITPNIY--VFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
L K + +Y V ++L+ NS DL Y +Q M++ G KPD +YNIL+ C G
Sbjct: 173 FLGMKPSTRLYNAVIDALVKSNSLDLAYLK--FQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR--------- 377
VD A + +K +E G + +VFTY+ +I F A ALK MR
Sbjct: 231 VDEA---IRLVKQMEQEGN-RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 378 --------------------------SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
NL V + +++ ++ + ++ Q ++
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI 346
Query: 412 LLAGCEPNTQCFNIIL------HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 465
G P++ FN + H VE C R F F S +G K G+N L
Sbjct: 347 GERGYIPDSSTFNAAMSCLLKGHDLVETC---RIFDGFVS-RGVK------PGFNGYL-- 394
Query: 466 GSIHNATTVPNGFSNSQILSFTERF-------PFTPTTSTYNTLLKA-CGSDYY-HAKAL 516
+ N+Q S +R+ + +YN ++ C + +A
Sbjct: 395 -------VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMF 447
Query: 517 INEMKTVGLSPNQITWSILI---DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 573
+ EM+ G+SPN +T++ + + G + V G +E L G KPDVI ++ I
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLV---HGFKPDVITFSLIINC 504
Query: 574 CVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 633
+K K A ++EM I PN +TYN L+++ G + + + ++ M++ G
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTG---DTDRSVKLFAKMKENGL 561
Query: 634 KPNDYYLEELIEEWCE-----------------GVIQDNREYQAEFSSIKKSELERPQSL 676
P+ Y I+ +C+ G+ DN Y ++ +S E
Sbjct: 562 SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE 621
Query: 677 LLEKIAAH------LLKRVADILAIDVQGLTK 702
+ I H KR+ + L + GL++
Sbjct: 622 MFSSIERHGCVPDSYTKRLVEELDLRKSGLSR 653
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 148/366 (40%), Gaps = 29/366 (7%)
Query: 294 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 353
Y +++ + LG+KP YN ++ A + +DLA Y + + + S G K D FTY
Sbjct: 163 YCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLA---YLKFQQMRSDG-CKPDRFTY 218
Query: 354 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 413
+ +I + A+++ M G N ++ LI+ AG V++A++ E M +
Sbjct: 219 NILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRV 278
Query: 414 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT 473
PN +H FR K ++L F E +SNL++
Sbjct: 279 RKLNPNEATIRTFVHG---------IFRCLPPCKAFEVLVGFMEK-DSNLQRVGYD---A 325
Query: 474 VPNGFSNSQILSFTERF-------PFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVG 524
V SN+ + T +F + P +ST+N + G D + + + G
Sbjct: 326 VLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG 385
Query: 525 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 584
+ P + +L+ + LK MG G+ V +Y I +++ + A
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 585 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
EM+ I PN VT+NT L S G V +V + + + G+KP+ +I
Sbjct: 446 MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVH---GVLEKLLVHGFKPDVITFSLII 502
Query: 645 EEWCEG 650
C
Sbjct: 503 NCLCRA 508
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 201/479 (41%), Gaps = 86/479 (17%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNI 298
P+ +Y A+IDA + ++ + + P+ + +N L++ + + + +
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD-------VF 351
+ M+ G +P++ +Y IL+ +AGRVD A LK LE + KL+ F
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA------LKQLEMMRVRKLNPNEATIRTF 291
Query: 352 TY----------------------STIIKVFADAKLW-----QMALKVKHDMRSAGVNLN 384
+ S + +V DA L+ MA + +R G
Sbjct: 292 VHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIG-ERG 350
Query: 385 TVAWSSLINA---CAHAG--LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 439
+ SS NA C G LVE ++F+ + G +P + +++ A + A ++
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETC-RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 440 FRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTV----------PNGFSNSQILS 485
R+ + +L S YN+ + K I NA PN + + LS
Sbjct: 410 DRYLKQMGVDGLLSSV-YSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLS 468
Query: 486 -FTER---------------FPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSP 527
++ R F P T++ ++ + A EM G+ P
Sbjct: 469 GYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEP 528
Query: 528 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 587
N+IT++ILI C T + + ++++ M + G+ PD+ AY I+ + + K+A L
Sbjct: 529 NEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELL 588
Query: 588 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
+ M + P+ TY+TL+KA S+ G E ++ ++ +++ G P D Y + L+EE
Sbjct: 589 KTMLRIGLKPDNFTYSTLIKALSESGRESEARE---MFSSIERHGCVP-DSYTKRLVEE 643
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 229 EAYDALKKHLD---GPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
+A+D K+ L+ PN Y +I +C GD +S ++ + ++P++Y +N+ +
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 286 N--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH 339
R + + + M +GLKPD +Y+ L+KA +GR A++M+ ++
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 162/383 (42%), Gaps = 47/383 (12%)
Query: 268 DLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
D+ NQ +TP+ N ++ + + Y N++ M G+ PD +SY +++ C G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
++ Q+ + L + G + D T + I+ + L A+ M G N
Sbjct: 232 KI---QEADRWLTGMIQRGFIP-DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNL 287
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
+ ++SLI+ G ++QA ++ EEM+ G +PN ++ + ++AFR F
Sbjct: 288 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFL- 346
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
K++ S + Y N +H T++ G+ L+
Sbjct: 347 ----KLVRS--DTYKPN-----VHTYTSMIGGYCKEDKLN-------------------- 375
Query: 506 CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 565
A+ L + MK GL PN T++ LI+ + A E++ MGD G P++
Sbjct: 376 ------RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 566 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 625
Y AI + +A L + SC + + VTY L++ + K ++ Q LA +
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN---DINQALAFF 486
Query: 626 QDMQKAGYKPNDYYLEELIEEWC 648
M K G++ + LI +C
Sbjct: 487 CRMNKTGFEADMRLNNILIAAFC 509
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 148/374 (39%), Gaps = 55/374 (14%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIY 266
I F ++I K+ + A E + + ++ PN+Y + A+ID GLC G K+ ++
Sbjct: 288 INFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID--GLCKRGWTEKAFRLF 345
Query: 267 EDLL-NQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
L+ + PN++ + S++ ++ L ++ M+ GL P++ +Y L+ C
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
AG A EL +L +++TY+ I A ++ + S G+
Sbjct: 406 AGSFGRAY----ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+ V ++ LI + QA+ F M G E + + NI++ A + + R F
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
+++ S G PT TY +++
Sbjct: 522 ------QLVVSLG-----------------------------------LIPTKETYTSMI 540
Query: 504 KA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
C D A + MK G P+ T+ LI V+ A ++ ++M D G+
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 562 -PDVIAYTTAIKVC 574
P+V T A + C
Sbjct: 601 PPEVTRVTLAYEYC 614
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 12/182 (6%)
Query: 494 PTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 551
P +S+Y ++ C D A + M G P+ T ++++ V AI
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY 274
Query: 552 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 611
+ M D G KP++I +T+ I + + KQA + EEM PN T+ L+ K
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 612 YGSVLEVQQCLAIYQDMQKAG-YKPNDYYLEELIEEWCEGVIQDNREYQAE--FSSIKKS 668
G ++ ++ + ++ YKPN + +I +C ++++ +AE FS +K+
Sbjct: 335 RG---WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC----KEDKLNRAEMLFSRMKEQ 387
Query: 669 EL 670
L
Sbjct: 388 GL 389
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 198/442 (44%), Gaps = 40/442 (9%)
Query: 211 FCNIISEFGKRRDLISALEAYDALK-KHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDL 269
+C ++ G+ ALE ++ L +H PN + AI+ G+ G + + E
Sbjct: 159 YCFVVKSVGQE-SWQRALEVFEWLNLRHWHSPNARMVAAIL---GVLGRWNQESLAVEIF 214
Query: 270 LNQKIT--PNIYVFNSLMNVNSRDLTYT--LNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
+ T + V+N++M V SR ++ + M+ G PD+ S+N L+ A +G
Sbjct: 215 TRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG 274
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
L ++ EL + L+ D TY+T++ + A+KV DM + +
Sbjct: 275 --GLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDL 332
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
++++I+ GL +A +LF E+ L G P+ +N +L+A ++ +
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 446 WKGNKMLGSFGEG---YNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 498
+ KM FG+ YN+ + KQG + A + + + + LS P T
Sbjct: 393 MQ--KM--GFGKDEMTYNTIIHMYGKQGQLDLALQL---YKDMKGLSGR-----NPDAIT 440
Query: 499 YNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE--NVEGAIEILKS 554
Y L+ + G + A AL++EM VG+ P T+S L ICG + E A +
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL--ICGYAKAGKREEAEDTFSC 498
Query: 555 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
M +G KPD +AY+ + V + ++A LY +M S P++ Y ++ K
Sbjct: 499 MLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENR 558
Query: 615 VLEVQQCLAIYQDMQK-AGYKP 635
++Q+ + +DM++ G P
Sbjct: 559 SDDIQKTI---RDMEELCGMNP 577
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 144/300 (48%), Gaps = 15/300 (5%)
Query: 155 SGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSR--NPKLAV------RYASLLPH 206
SG ++A EL++ + R + + +L+ + +I + S P LAV R + L P
Sbjct: 238 SGKFSKAQELVDAM-RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPD 296
Query: 207 AHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIY 266
A I + ++S + +L A++ ++ ++ H P+++ Y A+I G CG ++ ++
Sbjct: 297 A-ITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 267 EDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
+L + P+ +NSL+ R+ +YQ MQ +G D +YN ++
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G++DLA +YK++K L GR D TY+ +I A A + +M G+
Sbjct: 416 GQLDLALQLYKDMKGLS--GR-NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
+S+LI A AG E+A F ML +G +P+ ++++L + + +A+ +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/428 (18%), Positives = 187/428 (43%), Gaps = 24/428 (5%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDL 269
++ +II +GK++ A L++ P++ + +++ A CG + ++R I+ +
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 270 LNQKITPNIYVFNSLMN---VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ +P + N L++ V+ R L + + +Q++G K +S ++L A AG
Sbjct: 814 MRDGPSPTVESINILLHALCVDGR-LEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ + +Y +K + ++L Y +I++ K + A + +M A +
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRL----YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELA 928
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
W+S++ ++ +Q+++ + G EP+ +N ++ + + +
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 447 KG---NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
+ + L ++ ++ KQ + A + ++LS + S Y+T++
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQL-----FEELLSKGLKL----DRSFYHTMM 1039
Query: 504 K---ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
K GSD A+ L+ MK G+ P T +L+ + N + A ++L ++ D +
Sbjct: 1040 KISRDSGSD-SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEV 1098
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
+ + Y++ I + SK++ + EMK + P+ + ++A S +EV
Sbjct: 1099 ELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVML 1158
Query: 621 CLAIYQDM 628
L +D+
Sbjct: 1159 LLKALEDI 1166
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 185/471 (39%), Gaps = 72/471 (15%)
Query: 245 IYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIM 302
+Y II+A G + K+ + +L TP++ +NSLM+ ++ Y I+ M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 303 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 362
G P + S NILL A CV GR+ +++Y ++ L+ +G K+ + ++ FA
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRL---EELYVVVEELQDMG-FKISKSSILLMLDAFAR 869
Query: 363 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 422
A K+ M++AG + +I V A + EM A +
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 929
Query: 423 FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ 482
+N +L Y + + + K +
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGL------------------------------- 958
Query: 483 ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICG 540
P +TYNTL+ D + L+ +M+ +GL P T+ LI G
Sbjct: 959 ----------EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFG 1008
Query: 541 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 600
+ +E A ++ + + G+K D Y T +K+ +S + +A L + MK+ I P
Sbjct: 1009 KQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLA 1068
Query: 601 TYNTLLKARSKYGSVLEVQQCLAIYQDMQ------------KAGYKPNDYY--LEELIEE 646
T + L+ + S G+ E ++ L+ +D + A + DY +E L+E
Sbjct: 1069 TMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEM 1128
Query: 647 WCEGVIQDNREYQAEFSSIKKSELERPQSLLLEKIAAHLLKRVADILAIDV 697
EG+ D+R + R S EKI LL + + + D+
Sbjct: 1129 KKEGLEPDHRIWTC---------FVRAASFSKEKIEVMLLLKALEDIGFDL 1170
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 494 PTTSTYNTL----LKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
P ++NTL LK+ G A L++ ++ GL P+ IT++ L+ C N++GA+
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
++ + M +PD+ Y I V +A L+ E++ P+ VTYN+LL A
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPND 637
++ + +V++ +YQ MQK G+ ++
Sbjct: 378 ARERNTEKVKE---VYQQMQKMGFGKDE 402
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 145/350 (41%), Gaps = 47/350 (13%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
++ F + ++ + Y ++K P + +YR +I+ + + ++
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 274 ITPNIYVFNSLMNVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
+ ++NS++ + + D T+ +YQ ++ GL+PD T+YN L+ C R +
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR---PE 979
Query: 332 DMYKELKHLESVG-RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+ Y ++ + ++G KLD TY ++I F K + A ++ ++ S G+ L+ + +
Sbjct: 980 EGYLLMQQMRNLGLDPKLD--TYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHT 1037
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
++ +G +A +L + M AG EP ++++ + +S GN
Sbjct: 1038 MMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVS--------------YSSSGNP 1083
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDY 510
E SNLK + T P +S + L++ DY
Sbjct: 1084 ---QEAEKVLSNLKDTEVELTT--------------------LPYSSVIDAYLRS--KDY 1118
Query: 511 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
+ EMK GL P+ W+ + ++ + +LK++ D G
Sbjct: 1119 NSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 185/426 (43%), Gaps = 25/426 (5%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN 286
ALE D + + P + +++ L G + + + ++ PN + ++N
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 287 V--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
V S + + + M+ +K D Y+I++ C G +D A +++ E++ +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME----IK 292
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
K D+ TY+T+I F +A W K+ DM ++ N V +S LI++ G + +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 405 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH---SWKGNKMLGSFGEGYNS 461
QL +EM+ G PNT +N ++ + + + A + S + + +F N
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINE 519
K I + + S +++ T TYNTL++ C S AK L E
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIA---------NTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 520 MKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
M + + P+ +++ IL+D +C E +E A+EI + + ++ D+ Y I +
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGE-LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
A L+ + + + YN ++ + S+ + +++ M + G+ P++
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD---ILFRKMTEEGHAPDEL 579
Query: 639 YLEELI 644
LI
Sbjct: 580 TYNILI 585
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 206/502 (41%), Gaps = 41/502 (8%)
Query: 153 VMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASL----LPHAH 208
V G++ EAV +M+ + F +P+ + S + C + K + + L
Sbjct: 321 VKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDK 380
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
++F ++ F K ++ A+E Y +K P+ + +I C + I+ D
Sbjct: 381 VMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Query: 269 LLNQKITPNIY---VFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
I +F L+ + + ++M+ G++P++ YN ++ A C
Sbjct: 441 SFESWIAHGFMCNKIF--LLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
+DLA+ ++ E+ LE L+ + FTYS +I F K Q A V + M ++ N
Sbjct: 499 NMDLARSIFSEM--LEK--GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE 554
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC--FNIILHACVEACQYDRAFRFF 443
V ++++IN G +A ++ + L+ + C +N I+ V+ D A +
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQN-LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETY 613
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
N K ++ T++ NGF S + + L
Sbjct: 614 REMSENG-------------KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660
Query: 504 KACGS---------DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 554
A G+ D A L +E+ +GL PN ++ LI ++ AI++ K
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 555 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
M + GI D+ YTT I ++ N A LY E+ I P+ + + L+ SK G
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 615 VLEVQQCLAIYQDMQKAGYKPN 636
L+ + L ++M+K PN
Sbjct: 781 FLKASKML---EEMKKKDVTPN 799
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 168/396 (42%), Gaps = 59/396 (14%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF--TY 353
+ I++ + + G +PD +++ ++A C + +A D+ +E++ G+L + TY
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMR-----GKLGVPASQETY 313
Query: 354 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 413
+++I F + A++V +M G+ ++ +A +SL+N + +A+ LF M
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 414 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS------------------- 454
G P+ F++++ + + ++A F+ K ++ S
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEA 433
Query: 455 ----FGEGYNSNL--------------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTT 496
F + + S + KQG + AT+ L E+ P
Sbjct: 434 ALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATS---------FLKMMEQKGIEPNV 484
Query: 497 STYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 554
YN ++ A C + A+++ +EM GL PN T+SILID ++ + A +++
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 555 MGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
M + + + + Y T I +C + K L +K + +YN+++ K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 614 SVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
+ + Y++M + G PN LI +C+
Sbjct: 605 ---DTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 10/228 (4%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG-DFMKSRY-IY 266
+ F ++I+ F K + ALE +K ++ Y A+ID G C + MK+ Y ++
Sbjct: 626 VTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID--GFCKKNDMKTAYTLF 683
Query: 267 EDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
+L + PN+ V+NSL++ N + +++Y+ M N G+ D+ +Y ++
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G ++LA D+Y EL L V D + ++ + + A K+ +M+ V N
Sbjct: 744 GNINLASDLYSELLDLGIVP----DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
+ +S++I G + +A +L +EML G + FN+++ VE
Sbjct: 800 VLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 173/425 (40%), Gaps = 71/425 (16%)
Query: 271 NQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
N + PN+ V N+L++ + R G + ++N LL A R+D A
Sbjct: 144 NPTLIPNVMV-NNLVDSSKR--------------FGFELTPRAFNYLLNAYIRNKRMDYA 188
Query: 331 QDMYKELKHLESVGRLKLDVFTY-STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
D + + V R + Y + ++ + L A ++ + M GV + V
Sbjct: 189 VDCFGLM-----VDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQ 243
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 449
L+ A E+A+++F ++ G EP+ F++ + A + A +G
Sbjct: 244 LLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGK 303
Query: 450 KMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
+ + E Y S + K+G++ A V + +++ F TS N K
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMD-----EMVGFGIPMSVIAATSLVNGYCK- 357
Query: 506 CGSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDV 564
G++ A L N M+ GL+P+++ +S++++ C E +E AIE M I P
Sbjct: 358 -GNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNME-MEKAIEFYMRMKSVRIAPSS 415
Query: 565 IAYTTAIKVCVESKNFKQALTLYEE----------------------------------M 590
+ T I+ C+++++ + AL ++ + M
Sbjct: 416 VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 591 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
+ I PN V YN ++ A + + + +I+ +M + G +PN++ LI+ + +
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKN---MDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 651 VIQDN 655
+ N
Sbjct: 533 KDEQN 537
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 196/501 (39%), Gaps = 97/501 (19%)
Query: 161 AVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVR--YASLL-----PHAHILFCN 213
VE VLARF L + E+ + + V+SR K + + SL+ P L
Sbjct: 117 TVETYFVLARF-LAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDA 175
Query: 214 IISEFGKRRDLISALEAYDALKKH-LDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQ 272
++ + + A++ + +KH D P I CG D M
Sbjct: 176 LMITYTDLGFIPDAIQCFRLSRKHRFDVP--------IRGCGNLLDRM-----------M 216
Query: 273 KITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
K+ P ++ M + D + LN+Y +NIL+ C G + AQ
Sbjct: 217 KLNPTGTIWGFYMEI--LDAGFPLNVY-------------VFNILMNKFCKEGNISDAQK 261
Query: 333 MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
++ E+ L+ V +++T+I + ++KH M + + +S+LI
Sbjct: 262 VFDEITKRS----LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
NA ++ A LF+EM G PN F ++H HS G L
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG--------------HSRNGEIDL 363
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-GSDY 510
E Y L +G P YNTL+ C D
Sbjct: 364 --MKESYQKMLSKG-------------------------LQPDIVLYNTLVNGFCKNGDL 396
Query: 511 YHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTT 569
A+ +++ M GL P++IT++ LID C G + VE A+EI K M GI+ D + ++
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD-VETALEIRKEMDQNGIELDRVGFSA 455
Query: 570 AI-KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
+ +C E + L EM I P+ VTY ++ A K G + Q + ++M
Sbjct: 456 LVCGMCKEGRVIDAERAL-REMLRAGIKPDDVTYTMMMDAFCKKG---DAQTGFKLLKEM 511
Query: 629 QKAGYKPNDYYLEELIEEWCE 649
Q G+ P+ L+ C+
Sbjct: 512 QSDGHVPSVVTYNVLLNGLCK 532
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 142/310 (45%), Gaps = 21/310 (6%)
Query: 202 SLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMK 261
SL P + F +I+ + K +L ++K P+++ Y A+I+A
Sbjct: 270 SLQPTV-VSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 262 SRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTL--NIYQIMQNLGLKPDMTSYNILLK 319
+ +++++ + + PN +F +L++ +SR+ L YQ M + GL+PD+ YN L+
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 320 ACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRS 378
C G + A+++ + + R L+ D TY+T+I F + AL+++ +M
Sbjct: 389 GFCKNGDLVAARNIVDGM-----IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ 443
Query: 379 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 438
G+ L+ V +S+L+ G V A + EML AG +P+ + +++ A +
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 439 AFRFFHSWKGNKMLGS---FGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 495
F+ + + + S + N K G + NA + + N ++ P
Sbjct: 504 GFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV---------PD 554
Query: 496 TSTYNTLLKA 505
TYNTLL+
Sbjct: 555 DITYNTLLEG 564
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 165/401 (41%), Gaps = 56/401 (13%)
Query: 265 IYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
Y +L N + L+ V R + + +M G ++ ++NILLK C
Sbjct: 94 FYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC 153
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
A + +E++ L DVF+Y+T+I+ F + K + AL++ ++M+ +G +
Sbjct: 154 RNLECGKAVSLLREMRR----NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCS 209
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ V W LI+A AG +++A+ +EM G E + + ++ + + DR
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
F + L++G +P TYNTL
Sbjct: 270 F----------------DEVLERGD-------------------------SPCAITYNTL 288
Query: 503 LKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
++ C A + M G+ PN T++ LID G + A+++L M +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
+P+ + Y I + A+ + E MK P+ +TYN LL G + E +
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 621 CLAIYQDMQKAGY-KPNDYYLEELIEEWCEGVIQDNREYQA 660
L Y ++ + Y P+ LI G+ ++NR +QA
Sbjct: 409 LL--YLMLKDSSYTDPDVISYNALI----HGLCKENRLHQA 443
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 10/218 (4%)
Query: 482 QILSFTERFPFTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDIC 539
+L R P +YNT+++ C G + A L NEMK G S + +TW ILID
Sbjct: 163 SLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAF 222
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
++ A+ LK M G++ D++ YT+ I+ + + L++E+ P
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 600 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQ 659
+TYNTL++ K G + E + I++ M + G +PN Y LI+ C GV + Q
Sbjct: 283 ITYNTLIRGFCKLGQLKEASE---IFEFMIERGVRPNVYTYTGLIDGLC-GVGKTKEALQ 338
Query: 660 AEFSSIKKSELERPQSLLLEKIAAHLLKR--VADILAI 695
I+K E P ++ I L K VAD + I
Sbjct: 339 LLNLMIEKD--EEPNAVTYNIIINKLCKDGLVADAVEI 374
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/421 (18%), Positives = 185/421 (43%), Gaps = 36/421 (8%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIY 299
++ +Y ++I CG+ + + +++++L + +P +N+L+ + L I+
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+ M G++P++ +Y L+ C G+ A + + + + + TY+ II
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE----EPNAVTYNIIINK 361
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG--CE 417
L A+++ M+ + + ++ L+ G +++A +L ML +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG--------YNSNLKQGSIH 469
P+ +N ++H + + +A + + ++ G G NS LK G ++
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIY-----DLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 470 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSP 527
A + S+S+I+ + TY ++ C + + AK L+ +M+ L P
Sbjct: 477 KAMELWKQISDSKIVR---------NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 528 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 587
+ ++ L+ +++ A + + M PDV+++ I +++ + K A +L
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 588 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
M + P+ TY+ L+ K G + + ++ + M +G++P D ++ + + ++
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGY---LDEAISFFDKMVDSGFEP-DAHICDSVLKY 643
Query: 648 C 648
C
Sbjct: 644 C 644
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 180/417 (43%), Gaps = 75/417 (17%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
I + +I F K L A E ++ + + PN+Y Y +ID GLCG K++ +
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID--GLCG-VGKTKEALQ- 338
Query: 269 LLNQKIT----PNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
LLN I PN +N ++N +D + + I ++M+ +PD +YNILL C
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
G +D A +KL + LK S+ +
Sbjct: 399 AKGDLDEA--------------------------------SKLLYLMLK-----DSSYTD 421
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFE---EMLLAGCEPNTQCFNIILHACVEACQYDRA 439
+ +++++LI+ + QA+ +++ E L AG T NI+L++ ++A ++A
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT---NILLNSTLKAGDVNKA 478
Query: 440 FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF-------PF 492
+ +K++ NS+ T + +GF + +L+ +
Sbjct: 479 MELWKQISDSKIV------RNSD-------TYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 493 TPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
P+ YN LL + + +A L EM+ P+ ++++I+ID +++ A
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 607
+L M AG+ PD+ Y+ I ++ +A++ +++M P+ +++LK
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 194/458 (42%), Gaps = 24/458 (5%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
+R SL+P + +I F + ++L ALE + +K ++ + +IDA G
Sbjct: 168 MRRNSLMPDV-FSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 258 DFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYN 315
++ +++ + ++ V+ SL+ + +L ++ + G P +YN
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 316 ILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQMALKVKH 374
L++ C G++ A ++++ + + R ++ +V+TY+ +I + AL++ +
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFM-----IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
M N V ++ +IN GLV A+++ E M P+ +NI+L
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 435 QYDRAFRFFH-----SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 489
D A + + S + + S+ + K+ +H A + + + L +R
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV--EKLGAGDR 459
Query: 490 FPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
T N+ LKA D A L ++ + N T++ +ID T + A
Sbjct: 460 ---VTTNILLNSTLKA--GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
+L M + ++P V Y + + + QA L+EEM+ P+ V++N ++
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
K G + + L M +AG P+ + +LI +
Sbjct: 575 LKAGDIKSAESLLV---GMSRAGLSPDLFTYSKLINRF 609
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 140/301 (46%), Gaps = 22/301 (7%)
Query: 151 RMVMSGHIAEAVELMEVLAR---------FQLPIRELVQPSDMIKRCVLSRNPKLAVRYA 201
++ G +A+AVE++E++ + + + + L D+ + S+ L ++ +
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA---SKLLYLMLKDS 417
Query: 202 SLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMK 261
S I + +I K L AL+ YD L + L + ++++ GD K
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 262 SRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQ----IMQNLGLKPDMTSYNIL 317
+ +++ + + KI N + ++++ + T LN+ + M+ L+P + YN L
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCK--TGMLNVAKGLLCKMRVSELQPSVFDYNCL 535
Query: 318 LKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
L + C G +D A +++E++ + DV +++ +I A + A + M
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFP----DVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 378 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
AG++ + +S LIN G +++AI F++M+ +G EP+ + +L C+ + D
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 438 R 438
+
Sbjct: 652 K 652
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 192/425 (45%), Gaps = 21/425 (4%)
Query: 224 LISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNS 283
+ A+ +D + + P + + +I+ L G +++ + ++ + + ++ + +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 284 LMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
++N + D LN+ M+ +KPD+ Y+ ++ C G AQ ++ E+ LE
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM--LE 324
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
+ +VFTY+ +I F W A ++ DM +N + + +++LI+A G +
Sbjct: 325 K--GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 461
+A +L +EML P+T +N +++ + ++D A F ++ +N+
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT-----FNT 437
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHA-KALINE 519
+ A V G Q+L R T+TYNTL+ C D +A + L E
Sbjct: 438 IIDVYC--RAKRVDEGM---QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M + G+ P+ IT +IL+ E +E A+E+ + + + I D +AY I +
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYY 639
+A L+ + + P+ TYN ++ ++ + ++ M+ G++P++
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN---VLFHKMKDNGHEPDNST 609
Query: 640 LEELI 644
LI
Sbjct: 610 YNTLI 614
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 153/359 (42%), Gaps = 57/359 (15%)
Query: 240 GPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYT 295
PN++ Y +ID G C G + ++ + D++ ++I P++ FN+L++ + ++ L
Sbjct: 328 APNVFTYNCMID--GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
+ M + + PD +YN ++ C R D A+ M+ + DV T++T
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA--------SPDVVTFNT 437
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
II V+ AK +++ ++ G+ NT +++LI+ + A LF+EM+ G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
P+T NI+L+ E + + A F + +K+
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI------------------------ 533
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWS 533
T YN ++ C GS A L + G+ P+ T++
Sbjct: 534 -----------------DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
++I G + A + M D G +PD Y T I+ C+++ +++ L EM+S
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 183/439 (41%), Gaps = 69/439 (15%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
+Y + ++I NIY FN L+ + L+++L+ + + LG +PD+ ++N LL C
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 323 VAGRVDLAQDMYK---ELKHLESV----------------------------GR------ 345
+ R+ A ++ E LE+V GR
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 346 ---------LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 396
L +DV TY TI+ + AL + M + + V +S++I+
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW---KGNKMLG 453
G A LF EML G PN +N ++ ++ A R + N +
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 454 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH 512
+F ++++K+G + A + + + I P T TYN+++ C + +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIF---------PDTVTYNSMIYGFCKHNRFD 418
Query: 513 -AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
AK + + M SP+ +T++ +ID+ + V+ +++L+ + G+ + Y T I
Sbjct: 419 DAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
E N A L++EM S + P+ +T N LL + ++++ L +++ +Q +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG---FCENEKLEEALELFEVIQMS 531
Query: 632 GYKPNDYYLEELIEEWCEG 650
+ +I C+G
Sbjct: 532 KIDLDTVAYNIIIHGMCKG 550
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 147/336 (43%), Gaps = 57/336 (16%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIY 266
+ F +IS K L A + D + P+ Y ++I G C F +++++
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI--YGFCKHNRFDDAKHMF 424
Query: 267 EDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
DL+ +P++ FN++++V R + + + + + GL + T+YN L+ C
Sbjct: 425 -DLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
++ AQD+++E+ S G D T + ++ F + + + AL++ ++ + ++L+
Sbjct: 481 DNLNAAQDLFQEMI---SHGVCP-DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
TVA++ +I+ V++A LF + + G EP+ Q +N+++ A FH
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 445 SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK 504
K N G+ P STYNTL++
Sbjct: 597 KMKDN--------GHE---------------------------------PDNSTYNTLIR 615
Query: 505 AC--GSDYYHAKALINEMKTVGLSPNQITWSILIDI 538
C + + LI+EM++ G S + T ++ D+
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADL 651
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 39/310 (12%)
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I VF +A+ + M + LN +++ LI + ++ F ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
+P+ FN +LH C DR ++ L FG V
Sbjct: 172 FQPDVVTFNTLLHG---LCLEDRI---------SEALALFG---------------YMVE 204
Query: 476 NGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQIT 531
GF + L F + TP T+NTL+ + A AL+N+M GL + +T
Sbjct: 205 TGFLEAVAL-FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+ +++ + + A+ +L M + IKPDV+ Y+ I + + A L+ EM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 592 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGV 651
I PN TYN ++ +G + Q+ L +DM + P+ LI
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL---RDMIEREINPDVLTFNALI----SAS 376
Query: 652 IQDNREYQAE 661
+++ + ++AE
Sbjct: 377 VKEGKLFEAE 386
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 192/425 (45%), Gaps = 21/425 (4%)
Query: 224 LISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNS 283
+ A+ +D + + P + + +I+ L G +++ + ++ + + ++ + +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 284 LMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
++N + D LN+ M+ +KPD+ Y+ ++ C G AQ ++ E+ LE
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM--LE 324
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
+ +VFTY+ +I F W A ++ DM +N + + +++LI+A G +
Sbjct: 325 K--GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 461
+A +L +EML P+T +N +++ + ++D A F ++ +N+
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT-----FNT 437
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHA-KALINE 519
+ A V G Q+L R T+TYNTL+ C D +A + L E
Sbjct: 438 IIDVYC--RAKRVDEGM---QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M + G+ P+ IT +IL+ E +E A+E+ + + + I D +AY I +
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYY 639
+A L+ + + P+ TYN ++ ++ + ++ M+ G++P++
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN---VLFHKMKDNGHEPDNST 609
Query: 640 LEELI 644
LI
Sbjct: 610 YNTLI 614
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 184/450 (40%), Gaps = 59/450 (13%)
Query: 152 MVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHI-- 209
+ + G + EA L+ + L I + + + C + + K A+ S + HI
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG-DTKSALNLLSKMEETHIKP 294
Query: 210 ---LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIY 266
++ II K A + + + PN++ Y +ID G + ++ +
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 267 EDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
D++ ++I P++ FN+L++ + ++ L + M + + PD +YN ++ C
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
R D A+ M+ + DV T++TII V+ AK +++ ++ G+ N
Sbjct: 415 NRFDDAKHMFDLMA--------SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
T +++LI+ + A LF+EM+ G P+T NI+L+ E + + A F
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 445 SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK 504
+ +K+ T YN ++
Sbjct: 527 VIQMSKI-----------------------------------------DLDTVAYNIIIH 545
Query: 505 A-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 562
C GS A L + G+ P+ T++++I G + A + M D G +P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
D Y T I+ C+++ +++ L EM+S
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 165/395 (41%), Gaps = 66/395 (16%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
+Y + ++I NIY FN L+ + L+++L+ + + LG +PD+ ++N LL C
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187
Query: 323 VAGRVDLAQDMYK---ELKHLESV----------------------------GR------ 345
+ R+ A ++ E LE+V GR
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 346 ---------LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 396
L +DV TY TI+ + AL + M + + V +S++I+
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW---KGNKMLG 453
G A LF EML G PN +N ++ ++ A R + N +
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 454 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH 512
+F ++++K+G + A + + + I P T TYN+++ C + +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIF---------PDTVTYNSMIYGFCKHNRFD 418
Query: 513 -AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
AK + + M SP+ +T++ +ID+ + V+ +++L+ + G+ + Y T I
Sbjct: 419 DAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
E N A L++EM S + P+ +T N LL
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 39/310 (12%)
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I VF +A+ + M + LN +++ LI + ++ F ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
+P+ FN +LH C DR ++ L FG V
Sbjct: 172 FQPDVVTFNTLLHG---LCLEDRI---------SEALALFG---------------YMVE 204
Query: 476 NGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQIT 531
GF + L F + TP T+NTL+ + A AL+N+M GL + +T
Sbjct: 205 TGFLEAVAL-FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+ +++ + + A+ +L M + IKPDV+ Y+ I + + A L+ EM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 592 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGV 651
I PN TYN ++ +G + Q+ L +DM + P+ LI
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL---RDMIEREINPDVLTFNALI----SAS 376
Query: 652 IQDNREYQAE 661
+++ + ++AE
Sbjct: 377 VKEGKLFEAE 386
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 124/284 (43%), Gaps = 49/284 (17%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIY 266
+ F +IS K L A + D + P+ Y ++I G C F +++++
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI--YGFCKHNRFDDAKHMF 424
Query: 267 EDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
DL+ +P++ FN++++V R + + + + + GL + T+YN L+ C
Sbjct: 425 -DLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
++ AQD+++E+ S G D T + ++ F + + + AL++ ++ + ++L+
Sbjct: 481 DNLNAAQDLFQEMI---SHGVCP-DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI------------------- 425
TVA++ +I+ V++A LF + + G EP+ Q +N+
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 426 ----------------ILHACVEACQYDRAFRFFHSWKGNKMLG 453
++ C++A + D++ + N G
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 193/442 (43%), Gaps = 46/442 (10%)
Query: 265 IYEDLLNQKITPNIYVFNSLM-----NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLK 319
I++ ++ K+ PN+ N+L+ +S ++ ++ M +G+ ++ ++N+L+
Sbjct: 153 IFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVN 212
Query: 320 ACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSA 379
C+ G+++ A M L+ + S ++ D TY+TI+K + ++ DM+
Sbjct: 213 GYCLEGKLEDALGM---LERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 380 GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 439
G+ N V +++L+ G +++A Q+ E M P+ +NI+++ A
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 440 FRFFHSWKGNKML-----------GSFGEGYNSNLKQ--GSIHNATTVPNGFSNS----- 481
+ K K+ G F G + ++ + N N +++
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKW 389
Query: 482 ------------QILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSP 527
++ + F+P TY+TL+KA D A ++ EM G+
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 528 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 587
N IT + ++D ++ A +L S G D + Y T I + ++AL ++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 588 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
+EMK +I P T+N+L+ +G + + + + ++ ++G P+D +I +
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHG---KTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 648 C-EGVIQDNREYQAEFSSIKKS 668
C EG ++ E+ E SIK S
Sbjct: 567 CKEGRVEKAFEFYNE--SIKHS 586
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 187/464 (40%), Gaps = 63/464 (13%)
Query: 208 HILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE 267
++ + I+ K+ L E +KK+ PN Y ++ G ++ I E
Sbjct: 240 NVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 268 DLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
+ + P++ +N L+N N+ + L + M++L L+PD+ +YN L+ C G
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK-VFADAKLWQMALKVKHDMRSAGVNLN 384
L+ + K ++ +E+ G +K + T++ +K + + K + KVK + G + +
Sbjct: 360 ---LSLEARKLMEQMENDG-VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
V + +LI A G + A+++ EM G + NT N IL A + + D A +
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 445 SWKGNKMLG---SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
S + ++G ++ + A + + +I TPT ST+N+
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI---------TPTVSTFNS 526
Query: 502 LLKACGSDYYHAKALI-----NEMKTVGLSPNQITW-SILIDICGGTENVEGAIEILKSM 555
L+ G +H K + +E+ GL P+ T+ SI++ C VE A E
Sbjct: 527 LI---GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR-VEKAFEFYNES 582
Query: 556 GDAGIKPD----------------------------------VIAYTTAIKVCVESKNFK 581
KPD + Y T I + K K
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLK 642
Query: 582 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 625
+A L EM+ + P+ TYN+ + + G + E + L +
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 167/402 (41%), Gaps = 69/402 (17%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFN---S 283
LE DA+K P++ Y +ID C G +++R + E + N + N N
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 284 LMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL------ 337
+ + T + +++ G PD+ +Y+ L+KA G + A +M +E+
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 338 ----------------KHLESVGRLK---------LDVFTYSTIIKVFADAKLWQMALKV 372
+ L+ L +D TY T+I F + + AL++
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Query: 373 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN-IILHACV 431
+M+ + ++SLI H G E A++ F+E+ +G P+ FN IIL C
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Query: 432 EACQYDRAFRFF-----HSWKGNKMLGSFGEGYNSNL------KQGSIHNATTVPNGFSN 480
E + ++AF F+ HS+K + Y N+ K+G A F N
Sbjct: 569 EG-RVEKAFEFYNESIKHSFK--------PDNYTCNILLNGLCKEGMTEKAL----NFFN 615
Query: 481 SQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDI 538
+ I ER T TYNT++ A D +A L++EM+ GL P++ T++ I +
Sbjct: 616 TLI---EER---EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 539 CGGTENVEGAIEILKSM-GDAG-IKPDVIAYTTAIKVCVESK 578
+ E+LK G G +K D+ T ESK
Sbjct: 670 LMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESK 711
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 29/258 (11%)
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
++A H G A+Q+F++M+ +PN N +L V +Y +F
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV---RYPSSFS---------- 184
Query: 452 LGSFGEGYNSNLKQGSIHNATT---VPNGF----SNSQILSFTER----FPFTPTTSTYN 500
+ S E ++ +K G N T + NG+ L ER F P TYN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 501 TLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 558
T+LKA K L+ +MK GL PN++T++ L+ +++ A +I++ M
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 559 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 618
+ PD+ Y I + + ++ L L + MKS ++ P+ VTYNTL+ + G LE
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 619 QQCLAIYQDMQKAGYKPN 636
++ + + M+ G K N
Sbjct: 365 RK---LMEQMENDGVKAN 379
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 169/389 (43%), Gaps = 50/389 (12%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIY 266
+++ II K + AL +D ++ + P++ +Y ++++ GLC G + + +
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN--GLCNSGRWRDADSLL 235
Query: 267 EDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
+ +KI P++ FN+L++ ++ + +Y M + + P++ +Y L+ C+
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G VD A+ M+ +E+ G DV Y+++I F K A+K+ ++M G+ N
Sbjct: 296 GCVDEARQMFY---LMETKGCFP-DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
T+ +++LI G A ++F M+ G PN + +N++LH + +A F
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 445 SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK 504
+ +M G P TYN LL
Sbjct: 412 DMQKREMDG--------------------------------------VAPNIWTYNVLLH 433
Query: 505 ACGSDYYHAKALI--NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 562
+ KAL+ +M+ + IT++I+I V+ A+ + S+ G+KP
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+V+ YTT I +A L+ +MK
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 175/397 (44%), Gaps = 32/397 (8%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
++ ++ + P+I F L+NV + +N+ +Q +G+ D+ + N+L+ C
Sbjct: 59 LFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFC 118
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
+ + LA ++ L + D+ T++++I F + A+ + + M G+
Sbjct: 119 QSSQPYLASSFLGKMMKLG----FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY---DRA 439
+ V ++++I++ G V A+ LF++M G P+ + +++ + ++ D
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 440 FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTY 499
R K + +F ++ +K+G +A + N R P TY
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI---------RMSIAPNIFTY 285
Query: 500 NTL-----LKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 554
+L ++ C + A+ + M+T G P+ + ++ LI+ + V+ A++I
Sbjct: 286 TSLINGFCMEGCVDE---ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 555 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
M G+ + I YTT I+ + A ++ M S + PN TYN LL G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG- 401
Query: 615 VLEVQQCLAIYQDMQKA---GYKPNDYYLEELIEEWC 648
+V++ L I++DMQK G PN + L+ C
Sbjct: 402 --KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 180/406 (44%), Gaps = 34/406 (8%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNI 298
P++ + ++I+ L ++ + ++ I P++ ++ ++++ ++ + Y L++
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M+N G++PD+ Y L+ C +GR A + + + + ++K DV T++ +I
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM----TKRKIKPDVITFNALID 255
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
F + A ++ ++M + N ++SLIN G V++A Q+F M GC P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ + +++ + + D A + F+ + G+ TT+ GF
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL-------------TGNTITYTTLIQGF 362
Query: 479 SN-------SQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI-----NEMKTVGLS 526
++ S P TYN LL + KAL+ + + G++
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
PN T+++L+ +E A+ + + M + +I YT I+ ++ K A+ L
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
+ + S + PN VTY T++ + G E +++ M++ G
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH---VLFRKMKEDG 525
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 122/264 (46%), Gaps = 12/264 (4%)
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
H+ +A+ LF M+ + P+ F +L+ + ++D + ++G
Sbjct: 49 HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ---IMGVSH 105
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-GSDYYHAK 514
+ Y NL ++ + S L + F P T+ +L+ C G+ A
Sbjct: 106 DLYTCNLLMNCFCQSS---QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 515 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 574
+++N+M +G+ P+ + ++ +ID +V A+ + M + GI+PDV+ YT+ +
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 575 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYK 634
S ++ A +L M +I P+ +T+N L+ A K G L+ ++ +Y +M +
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE---LYNEMIRMSIA 279
Query: 635 PNDYYLEELIEEWC-EGVIQDNRE 657
PN + LI +C EG + + R+
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQ 303
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 165/384 (42%), Gaps = 53/384 (13%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G +P+ +YN L+ + A ++ A +++ +++ K D TY T+I + A A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE----AGCKPDRVTYCTLIDIHAKAGF 449
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
+A+ + M++ G++ +T +S +IN AG + A +LF EM+ GC PN +NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
++ +A Y A + + + NA
Sbjct: 510 MMDLHAKARNYQNALKLYRD----------------------MQNAG------------- 534
Query: 486 FTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 543
F P TY+ +++ G Y A+A+ EM+ P++ + +L+D+ G
Sbjct: 535 ------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
NVE A + ++M AG++P+V + + + +A L + M + + P+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFS 663
LL + S L++ C Q M G+ P +L ++ +G ++ R + F
Sbjct: 649 LLLSCCTDGRSKLDMGFC---GQLMASTGH-PAHMFLLKMPAAGPDG--ENVRNHANNFL 702
Query: 664 SIKKSELERPQSLLLEKIAAHLLK 687
+ SE + L++ + L K
Sbjct: 703 DLMHSEDRESKRGLVDAVVDFLHK 726
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 147/341 (43%), Gaps = 56/341 (16%)
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+ +QNLGL+ D N +LK G A + LK K D TY+T++
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPG---FKHDGHTYTTMVGN 373
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
AK + K+ +M G NTV ++ LI++ A + +A+ +F +M AGC+P+
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 420 --TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
T C I +HA +A D A + ++ G +
Sbjct: 434 RVTYCTLIDIHA--KAGFLDIAMDMYQ-----------------RMQAGGL--------- 465
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSIL 535
+P T TY+ ++ G + A L EM G +PN +T++I+
Sbjct: 466 ---------------SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
+D+ N + A+++ + M +AG +PD + Y+ ++V ++A ++ EM+
Sbjct: 511 MDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW 570
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
P+ Y L+ K G+V + Q YQ M AG +PN
Sbjct: 571 IPDEPVYGLLVDLWGKAGNVEKAWQ---WYQAMLHAGLRPN 608
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 54/360 (15%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQI 301
+ Y ++ G F + ++++ PN +N L++ R L +N++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
MQ G KPD +Y L+ AG +D+A DMY+ ++ G L D FTYS II
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ----AGGLSPDTFTYSVIINCLG 480
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
A A K+ +M G N V ++ +++ A A + A++L+ +M AG EP+
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
++I++ ++LG G + A V
Sbjct: 541 TYSIVM----------------------EVLGHC----------GYLEEAEAV------- 561
Query: 482 QILSFTE--RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILID 537
FTE + + P Y L+ G + A M GL PN T + L+
Sbjct: 562 ----FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
+ A E+L++M G++P + YT + C + ++ K + ++ + HP
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS-KLDMGFCGQLMASTGHP 676
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 112/262 (42%), Gaps = 41/262 (15%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIY---------------------- 246
+ + +I +G+ L A+ ++ +++ P+ Y
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 247 -------------RAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLT 293
II+ G G + ++ ++++Q TPN+ +N +M+++++
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 294 Y--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 351
Y L +Y+ MQN G +PD +Y+I+++ G ++ A+ ++ E++ + D
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI----PDEP 575
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
Y ++ ++ A + A + M AG+ N +SL++ + +A +L + M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 412 LLAGCEPNTQCFNIILHACVEA 433
L G P+ Q + ++L C +
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDG 657
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQ 300
P+ +Y ++D G G+ K+ Y+ +L+ + PN+ NSL++ R + Y+
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR-VNKIAEAYE 630
Query: 301 IMQN---LGLKPDMTSYNILLKACCVAGRVDL 329
++QN LGL+P + +Y +LL +CC GR L
Sbjct: 631 LLQNMLALGLRPSLQTYTLLL-SCCTDGRSKL 661
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 150/352 (42%), Gaps = 34/352 (9%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
+++ +L PN+ + +L+ +R L + + ++ M G +P++ +YN L+ C
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 323 VAGRVD----LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRS 378
GR L +DM K R++ +V T++ +I F A ++ + M
Sbjct: 235 EIGRWGDAAWLLRDMMKR--------RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 379 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 438
V + + SLIN GL+++A Q+F M GC PN + ++H ++ + +
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 439 AFRFFHSWKGNKMLGS------FGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 492
+ F+ ++ + +GY G A V N S + R P
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGY---CLVGRPDVAQEVFNQMS-------SRRAP- 395
Query: 493 TPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
P TYN LL C A + M+ + N +T++I+I VE A +
Sbjct: 396 -PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
+ S+ G+KP+VI YTT I +A +L+++MK PN Y
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 150/335 (44%), Gaps = 28/335 (8%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIY 266
+ + +I K R L A+E ++ + + PN+ Y A++ GLC G + + ++
Sbjct: 189 VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT--GLCEIGRWGDAAWLL 246
Query: 267 EDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
D++ ++I PN+ F +L++ V L +Y +M + + PD+ +Y L+ C+
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G +D A+ M+ +E G +V Y+T+I F +K + +K+ ++M GV N
Sbjct: 307 GLLDEARQMFYL---MERNGCYPNEVI-YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
T+ ++ LI G + A ++F +M P+ + +N++L + ++A F
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 445 SWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP--FTPTTSTY 499
+ +M + ++ K G + +A + F F P TY
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL-----------FCSLFSKGMKPNVITY 471
Query: 500 NTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITW 532
T++ C H A +L +MK G PN+ +
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 25/273 (9%)
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
+ ++ L++ A + I LFE+M + G P NI++H + Q RA F
Sbjct: 84 IDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL-- 141
Query: 446 WKGNKM-------LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 498
G M L +F N I +A + + QIL F P T
Sbjct: 142 --GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD-----QILGMG----FKPNVVT 190
Query: 499 YNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 556
Y TL++ + + HA L N+M T G PN +T++ L+ A +L+ M
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 616
I+P+VI +T I V+ +A LY M ++P+ TY +L+ YG +
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 617 EVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
E +Q ++ M++ G PN+ LI +C+
Sbjct: 311 EARQ---MFYLMERNGCYPNEVIYTTLIHGFCK 340
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 175/429 (40%), Gaps = 51/429 (11%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACC 322
++ +++ + P+I F L++V ++ Y +++++ MQ LG+ P + + NI++ C
Sbjct: 70 LFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC 129
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
++ + A ++ L + D+ T+++++ + + A+ + + G
Sbjct: 130 LSSQPCRASCFLGKMMKLG----FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
N V +++LI + A++LF +M G PN +N ++ E ++ A
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA--- 242
Query: 443 FHSWKGNKMLG--------SFGEGYNSNLKQGSIHNA----------TTVPNGFSNS--- 481
+W M+ +F ++ +K G + A + P+ F+
Sbjct: 243 --AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 482 -------------QILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLS 526
Q+ ER P Y TL+ C S + EM G+
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
N IT+++LI + A E+ M PD+ Y + + ++AL +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
+E M+ E+ N VTY +++ K G +V+ ++ + G KPN +I
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLG---KVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 647 WC-EGVIQD 654
+C G+I +
Sbjct: 478 FCRRGLIHE 486
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 165/384 (42%), Gaps = 53/384 (13%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G +P+ +YN L+ + A ++ A +++ +++ K D TY T+I + A A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE----AGCKPDRVTYCTLIDIHAKAGF 449
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
+A+ + M++ G++ +T +S +IN AG + A +LF EM+ GC PN +NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
++ +A Y A + + + NA
Sbjct: 510 MMDLHAKARNYQNALKLYRD----------------------MQNAG------------- 534
Query: 486 FTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 543
F P TY+ +++ G Y A+A+ EM+ P++ + +L+D+ G
Sbjct: 535 ------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
NVE A + ++M AG++P+V + + + +A L + M + + P+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFS 663
LL + S L++ C Q M G+ P +L ++ +G ++ R + F
Sbjct: 649 LLLSCCTDGRSKLDMGFC---GQLMASTGH-PAHMFLLKMPAAGPDG--ENVRNHANNFL 702
Query: 664 SIKKSELERPQSLLLEKIAAHLLK 687
+ SE + L++ + L K
Sbjct: 703 DLMHSEDRESKRGLVDAVVDFLHK 726
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 147/341 (43%), Gaps = 56/341 (16%)
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+ +QNLGL+ D N +LK G A + LK K D TY+T++
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPG---FKHDGHTYTTMVGN 373
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
AK + K+ +M G NTV ++ LI++ A + +A+ +F +M AGC+P+
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 420 --TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
T C I +HA +A D A + ++ G +
Sbjct: 434 RVTYCTLIDIHA--KAGFLDIAMDMYQ-----------------RMQAGGL--------- 465
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSIL 535
+P T TY+ ++ G + A L EM G +PN +T++I+
Sbjct: 466 ---------------SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
+D+ N + A+++ + M +AG +PD + Y+ ++V ++A ++ EM+
Sbjct: 511 MDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW 570
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
P+ Y L+ K G+V + Q YQ M AG +PN
Sbjct: 571 IPDEPVYGLLVDLWGKAGNVEKAWQ---WYQAMLHAGLRPN 608
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 54/360 (15%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQI 301
+ Y ++ G F + ++++ PN +N L++ R L +N++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
MQ G KPD +Y L+ AG +D+A DMY+ ++ G L D FTYS II
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ----AGGLSPDTFTYSVIINCLG 480
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
A A K+ +M G N V ++ +++ A A + A++L+ +M AG EP+
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
++I++ ++LG G + A V
Sbjct: 541 TYSIVM----------------------EVLGHC----------GYLEEAEAV------- 561
Query: 482 QILSFTE--RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILID 537
FTE + + P Y L+ G + A M GL PN T + L+
Sbjct: 562 ----FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
+ A E+L++M G++P + YT + C + ++ K + ++ + HP
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS-KLDMGFCGQLMASTGHP 676
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 112/262 (42%), Gaps = 41/262 (15%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIY---------------------- 246
+ + +I +G+ L A+ ++ +++ P+ Y
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 247 -------------RAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLT 293
II+ G G + ++ ++++Q TPN+ +N +M+++++
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 294 Y--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 351
Y L +Y+ MQN G +PD +Y+I+++ G ++ A+ ++ E++ + D
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI----PDEP 575
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
Y ++ ++ A + A + M AG+ N +SL++ + +A +L + M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 412 LLAGCEPNTQCFNIILHACVEA 433
L G P+ Q + ++L C +
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDG 657
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQ 300
P+ +Y ++D G G+ K+ Y+ +L+ + PN+ NSL++ R + Y+
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR-VNKIAEAYE 630
Query: 301 IMQN---LGLKPDMTSYNILLKACCVAGRVDL 329
++QN LGL+P + +Y +LL +CC GR L
Sbjct: 631 LLQNMLALGLRPSLQTYTLLL-SCCTDGRSKL 661
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 165/384 (42%), Gaps = 53/384 (13%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G +P+ +YN L+ + A ++ A +++ +++ K D TY T+I + A A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE----AGCKPDRVTYCTLIDIHAKAGF 449
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
+A+ + M++ G++ +T +S +IN AG + A +LF EM+ GC PN +NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
++ +A Y A + + + NA
Sbjct: 510 MMDLHAKARNYQNALKLYRD----------------------MQNAG------------- 534
Query: 486 FTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 543
F P TY+ +++ G Y A+A+ EM+ P++ + +L+D+ G
Sbjct: 535 ------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
NVE A + ++M AG++P+V + + + +A L + M + + P+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFS 663
LL + S L++ C Q M G+ P +L ++ +G ++ R + F
Sbjct: 649 LLLSCCTDGRSKLDMGFC---GQLMASTGH-PAHMFLLKMPAAGPDG--ENVRNHANNFL 702
Query: 664 SIKKSELERPQSLLLEKIAAHLLK 687
+ SE + L++ + L K
Sbjct: 703 DLMHSEDRESKRGLVDAVVDFLHK 726
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 147/341 (43%), Gaps = 56/341 (16%)
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+ +QNLGL+ D N +LK G A + LK K D TY+T++
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPG---FKHDGHTYTTMVGN 373
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
AK + K+ +M G NTV ++ LI++ A + +A+ +F +M AGC+P+
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 420 --TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
T C I +HA +A D A + ++ G +
Sbjct: 434 RVTYCTLIDIHA--KAGFLDIAMDMYQ-----------------RMQAGGL--------- 465
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSIL 535
+P T TY+ ++ G + A L EM G +PN +T++I+
Sbjct: 466 ---------------SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
+D+ N + A+++ + M +AG +PD + Y+ ++V ++A ++ EM+
Sbjct: 511 MDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW 570
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
P+ Y L+ K G+V + Q YQ M AG +PN
Sbjct: 571 IPDEPVYGLLVDLWGKAGNVEKAWQ---WYQAMLHAGLRPN 608
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 54/360 (15%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQI 301
+ Y ++ G F + ++++ PN +N L++ R L +N++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 424
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
MQ G KPD +Y L+ AG +D+A DMY+ ++ G L D FTYS II
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ----AGGLSPDTFTYSVIINCLG 480
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
A A K+ +M G N V ++ +++ A A + A++L+ +M AG EP+
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
++I++ ++LG G + A V
Sbjct: 541 TYSIVM----------------------EVLGHC----------GYLEEAEAV------- 561
Query: 482 QILSFTE--RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILID 537
FTE + + P Y L+ G + A M GL PN T + L+
Sbjct: 562 ----FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
+ A E+L++M G++P + YT + C + ++ K + ++ + HP
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS-KLDMGFCGQLMASTGHP 676
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 112/262 (42%), Gaps = 41/262 (15%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIY---------------------- 246
+ + +I +G+ L A+ ++ +++ P+ Y
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 247 -------------RAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLT 293
II+ G G + ++ ++++Q TPN+ +N +M+++++
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 294 Y--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 351
Y L +Y+ MQN G +PD +Y+I+++ G ++ A+ ++ E++ + D
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI----PDEP 575
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
Y ++ ++ A + A + M AG+ N +SL++ + +A +L + M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 412 LLAGCEPNTQCFNIILHACVEA 433
L G P+ Q + ++L C +
Sbjct: 636 LALGLRPSLQTYTLLLSCCTDG 657
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQ 300
P+ +Y ++D G G+ K+ Y+ +L+ + PN+ NSL++ R + Y+
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR-VNKIAEAYE 630
Query: 301 IMQN---LGLKPDMTSYNILLKACCVAGRVDL 329
++QN LGL+P + +Y +LL +CC GR L
Sbjct: 631 LLQNMLALGLRPSLQTYTLLL-SCCTDGRSKL 661
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 172/439 (39%), Gaps = 69/439 (15%)
Query: 264 YIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
Y++E + I N+ N L+N R L+ L+ M LG +P + ++ LL
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C RV A M+ ++ + K +V Y+TII +K AL + + M G+
Sbjct: 162 CRGDRVYDALYMFDQMVGMG----YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
+ V ++SLI+ +G A ++ M P+ FN ++ ACV
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV---------- 267
Query: 442 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
K+G + A F I R P TY+
Sbjct: 268 ----------------------KEGRVSEAEE----FYEEMI-----RRSLDPDIVTYSL 296
Query: 502 LLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
L+ S A+ + M + G P+ +T+SILI+ ++ VE +++ M G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 619
+ + + YT I+ + A ++ M C +HPN +TYN LL G +++
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG---KIE 413
Query: 620 QCLAIYQDMQKAGYKPN--DYYL--------EELIEEW-------CEGVIQDNREYQAEF 662
+ L I DMQK G + Y + E+ + W C+G++ D Y
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 663 SSIKKSELERPQSLLLEKI 681
+ K L R L K+
Sbjct: 474 LGLYKKGLRREADALFRKM 492
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 154/330 (46%), Gaps = 24/330 (7%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIY 266
+++ II K + + +AL+ + ++K GP++ Y ++I GLC G + + +
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS--GLCSSGRWSDATRMV 244
Query: 267 EDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
+ ++I P+++ FN+L++ V ++ Y+ M L PD+ +Y++L+ C+
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
R+D A++M+ + S G DV TYS +I + +K + +K+ +M GV N
Sbjct: 305 SRLDEAEEMFG---FMVSKGCFP-DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
TV ++ LI AG + A ++F M+ G PN +N++LH + + ++A
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 445 SWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
+ N M + ++ K G + +A + + ++ P TY T
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM---------PDIWTYTT 471
Query: 502 LLKACGSD--YYHAKALINEMKTVGLSPNQ 529
++ A AL +MK G+ PN+
Sbjct: 472 MMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 160/360 (44%), Gaps = 45/360 (12%)
Query: 276 PNIYVFNSLMNVNSR-DLTY-TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
P+I F SL+N R D Y L ++ M +G KP++ YN ++ C + +VD A D+
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
L +E G + DV TY+++I + W A ++ M + + +++LI+
Sbjct: 209 ---LNRMEKDG-IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Query: 394 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG 453
AC G V +A + +EEM+ +P+ ++++++ + D A F G
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK---G 321
Query: 454 SFGE---------GYNSNLK-------------QGSIHNATT---VPNGFSNSQILSFTE 488
F + GY + K +G + N T + G+ + L+ E
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 489 ----RFPFT---PTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWSILI-DI 538
R F P TYN LL + KAL+ +M+ G+ + +T++I+I +
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 598
C E V A +I S+ G+ PD+ YTT + + ++A L+ +MK I PN
Sbjct: 442 CKAGE-VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 31/260 (11%)
Query: 401 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 460
++ ++ LF M+ P+ F+ +L A + +YD + W+ +MLG
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI---YLWEQMQMLGI------ 112
Query: 461 SNLKQGSIHNATT---VPNGFSNSQILSFTERF-------PFTPTTSTYNTLLKA-C-GS 508
HN T + N F LS F P+ T+ +LL C G
Sbjct: 113 -------PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 509 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
Y A + ++M +G PN + ++ +ID ++ V+ A+++L M GI PDV+ Y
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
+ I S + A + M EI+P+ T+N L+ A K G V E ++ Y++M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE---FYEEM 282
Query: 629 QKAGYKPNDYYLEELIEEWC 648
+ P+ LI C
Sbjct: 283 IRRSLDPDIVTYSLLIYGLC 302
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 15/291 (5%)
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 409
V +Y ++K+FA+ ++ ++ +M G ++ LI +C AGL +QA+ F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 410 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 469
+ P +N IL++ + QY W +ML +G++ ++ +I
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYK-----LIEWVYKQMLE---DGFSPDVLTYNIL 260
Query: 470 NATTVPNGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGL 525
T G + F E R F+P + TYN LL G AL +N MK VG+
Sbjct: 261 LWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI 320
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
P+ + ++ LID N+E L M AG +PDV+ YT I V S +A
Sbjct: 321 DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKE 380
Query: 586 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
++ EM PN TYN++++ G E ++ + ++M+ G PN
Sbjct: 381 MFREMTVKGQLPNVFTYNSMIRGLCMAG---EFREACWLLKEMESRGCNPN 428
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 135/337 (40%), Gaps = 67/337 (19%)
Query: 246 YRAIIDACGLCG-------DFMKSRYIYEDLLNQKITPNIY--VFNSLMNVNSRDLTYTL 296
+ +I +CG G FMKS+ N + + Y + NSL+ V L
Sbjct: 187 FNLLICSCGEAGLAKQAVVQFMKSK-----TFNYRPFKHSYNAILNSLLGVKQYKLIEW- 240
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
+Y+ M G PD+ +YNILL G++D ++ E+ D +TY+ +
Sbjct: 241 -VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMAR----DGFSPDSYTYNIL 295
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
+ + AL + M+ G++ + + +++LI+ + AG +E +EM+ AGC
Sbjct: 296 LHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGC 355
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
P+ C+ +++ V + + D+A F L
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL------------------------ 391
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSI 534
P TYN++++ ++ A L+ EM++ G +PN + +S
Sbjct: 392 -----------------PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYST 434
Query: 535 LIDICGGTENVEGAIEILKSMGDAG----IKPDVIAY 567
L+ + A ++++ M G + P ++ Y
Sbjct: 435 LVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNI 298
P + Y AI+++ + ++Y+ +L +P++ +N L+ N R + +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M G PD +YNILL + G+ + L H++ VG + V Y+T+I
Sbjct: 277 FDEMARDGFSPDSYTYNILLH---ILGKGNKPLAALTTLNHMKEVG-IDPSVLHYTTLID 332
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
+ A + +M AG + V ++ +I +G +++A ++F EM + G P
Sbjct: 333 GLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 419 NTQCFNIILHACVEACQYDRA 439
N +N ++ A ++ A
Sbjct: 393 NVFTYNSMIRGLCMAGEFREA 413
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 231 YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR 290
+D + + P+ Y Y ++ G + + + I P++ + +L++ SR
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 291 --DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 348
+L M G +PD+ Y +++ V+G +D A++M++E+ G+L
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT---VKGQLP- 392
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
+VFTY+++I+ A ++ A + +M S G N N V +S+L++ AG + +A ++
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
Query: 409 EEMLLAG 415
EM+ G
Sbjct: 453 REMVKKG 459
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 207/484 (42%), Gaps = 54/484 (11%)
Query: 201 ASLLPHAHILFCNIISEFGKRRDLISA--LEAYDALKKHLDGPNMYIYRAIIDACGLCGD 258
AS+ P H+L ++I F RD S L D L+ H P+ + ++I G+
Sbjct: 91 ASIFPRTHML-DSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGE 149
Query: 259 FMKSRYIYEDLLNQKITPNIYVFNSLM---------NVNSRDLTYTLNIYQIMQNLG-LK 308
+ + E + N+ + Y F++ + + +L L ++ + G L
Sbjct: 150 MDNAIEVLEMMTNKNVN---YPFDNFVCSAVISGFCKIGKPELA--LGFFESAVDSGVLV 204
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P++ +Y L+ A C G+VD +D+ ++ LE G + D YS I +
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDL---VRRLEDEG-FEFDCVFYSNWIHGYFKGGALVD 260
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
AL +M G+N + V++S LI+ + G VE+A+ L +M+ G EPN + I+
Sbjct: 261 ALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIR 320
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
+ + + AF F N++L S G + L I N +L E
Sbjct: 321 GLCKMGKLEEAFVLF-----NRIL-SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDME 374
Query: 489 RFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV--GLSPNQITWSILIDICGGTENVE 546
+ P+ TYNT++ ++E V G+ + IT+S L+D +N++
Sbjct: 375 QRGIQPSILTYNTVING-----LCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNID 429
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
+EI + +A I D++ +K + + +A LY M ++ P+ TY T++
Sbjct: 430 AVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMI 489
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPN----------------DYYLEELIEEWCEG 650
K K G ++++ L ++ +++K+ D E LIE W +G
Sbjct: 490 KGYCKTG---QIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 651 VIQD 654
+ D
Sbjct: 547 LYLD 550
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 195/460 (42%), Gaps = 52/460 (11%)
Query: 208 HILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE 267
L+ +I ++ +L A +++ P++ Y +I+ GLC M R
Sbjct: 347 EFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN--GLC---MAGRVSEA 401
Query: 268 DLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
D +++ + ++ +++L++ + +++ L I + + D+ NILLKA + G
Sbjct: 402 DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMG 461
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
A +Y+ + ++ L D TY+T+IK + + AL++ +++R + V+
Sbjct: 462 AYGEADALYRAMPEMD----LTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS-AA 516
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
V ++ +I+A G+++ A ++ E+ G + +LH+ H+
Sbjct: 517 VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS-------------IHA 563
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTY------ 499
G+K G G Y L+Q + + V G N IL +R F Y
Sbjct: 564 NGGDK--GILGLVYG--LEQLN----SDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRK 615
Query: 500 -------NTLLKACGSDYYHAKA---LINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
+T+LK + A ++N +T S + I ++I+I+ + A+
Sbjct: 616 GLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKAL 675
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
+ G+ + I Y + I + +AL L++ +++ + P+ VTY L+
Sbjct: 676 NLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNL 735
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
K G L+ ++ L M G PN +++ +C+
Sbjct: 736 CKEGLFLDAEKLL---DSMVSKGLVPNIIIYNSIVDGYCK 772
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 153/357 (42%), Gaps = 38/357 (10%)
Query: 338 KHLESVGRLK-----LDVFTYSTIIKVFADAKLWQM-ALKVKHDMRSAGVNLNTVAWSSL 391
K +ES GR+K DVFTY+ I++V +++ M A V ++M + N + L
Sbjct: 145 KAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGIL 204
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
++ G A ++F++M G PN + I++ + D A + F+ + +
Sbjct: 205 MDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS-- 262
Query: 452 LGSFGEGYNSNLKQGSIHNATTVPNGFSN-------SQILSFTERFPFTPTTSTYNTLLK 504
N HNA + +GF ++L E+ F Y++L+
Sbjct: 263 ---------GNYPDSVAHNA--LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Query: 505 AC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 562
Y A L M + P+ I ++ILI +E A+++L SM GI P
Sbjct: 312 GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 622
D Y IK ++ +L EM E P+ T+ L+ + + G V E ++
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEE-- 429
Query: 623 AIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQAEFSSIKKSELERPQSLLL 678
I+ +++K+G P+ LI+ C+ G +++ R + K E+ RP SL L
Sbjct: 430 -IFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL------LHKMEVGRPASLFL 479
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 188/450 (41%), Gaps = 60/450 (13%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGD---FMKSRYIYE 267
FC +IS + K A+E++ +K+ P+++ Y I+ + + FM + +Y
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV--MMREEVFFMLAFAVYN 187
Query: 268 DLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
++L +PN+Y F LM+ + ++ M G+ P+ +Y IL+ C G
Sbjct: 188 EMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRG 247
Query: 326 RVDLAQDMYKEL-----------------------KHLESVGRLKL---DVFT-----YS 354
D A+ ++ E+ + +E+ L+L D F YS
Sbjct: 248 SADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYS 307
Query: 355 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 414
++I A+ + A ++ +M + + + ++ LI + AG +E A++L M
Sbjct: 308 SLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367
Query: 415 GCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT 473
G P+T C+N ++ A C + ++ S E + +I +
Sbjct: 368 GISPDTYCYNAVIKALCGRG--------LLEEGRSLQLEMSETESFPDACTH-TILICSM 418
Query: 474 VPNGF--SNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQ 529
NG +I + E+ +P+ +T+N L+ C S + A+ L+++M+ VG P
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME-VG-RPAS 476
Query: 530 ITWSI------LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 583
+ + D + ++ A L D G PD+++Y I + + A
Sbjct: 477 LFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGA 536
Query: 584 LTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
L L ++ + P+ VTYNTL+ + G
Sbjct: 537 LKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 142/322 (44%), Gaps = 27/322 (8%)
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
+ +I + ++ + + +++S GV++++ + LI+A A G+ E+A++ F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 413 LAGCEPNTQCFNIILHACV-EACQYDRAFRFFHSW---KGNKMLGSFGEGYNSNLKQGSI 468
C P+ +N+IL + E + AF ++ + L +FG + K+G
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL-----KACGSDYYHAKALINEMKTV 523
+A + + + I +P TY L+ + D A+ L EM+T
Sbjct: 215 SDAQKMFDDMTGRGI---------SPNRVTYTILISGLCQRGSADD---ARKLFYEMQTS 262
Query: 524 GLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 582
G P+ + + L+D C VE A E+L+ G + Y++ I ++ + Q
Sbjct: 263 GNYPDSVAHNALLDGFCKLGRMVE-AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQ 321
Query: 583 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEE 642
A LY M I P+ + Y L++ SK G +++ L + M G P+ Y
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAG---KIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 643 LIEEWC-EGVIQDNREYQAEFS 663
+I+ C G++++ R Q E S
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMS 400
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 131/310 (42%), Gaps = 34/310 (10%)
Query: 156 GHIAEAVELMEVLAR--FQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPH----AHI 209
G + EA EL+ + + F L +R D + R R + YA++L I
Sbjct: 282 GRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRA--RRYTQAFELYANMLKKNIKPDII 339
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFM--KSRYIYE 267
L+ +I K + AL+ ++ P+ Y Y A+I A LCG + + R +
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKA--LCGRGLLEEGRSLQL 397
Query: 268 DLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
++ + P+ L+ R+ + I+ ++ G P + ++N L+ C +G
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457
Query: 326 RVDLAQDMYKELK---------HLESVGRLKLDVFTYS-TIIKVFADAKLWQMALKVKHD 375
+ A+ + +++ L G D S +I+K + D + H
Sbjct: 458 ELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRD---------LAH- 507
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 435
G + + V+++ LIN AG ++ A++L + L G P++ +N +++ +
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Query: 436 YDRAFRFFHS 445
+ AF+ F++
Sbjct: 568 EEEAFKLFYA 577
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 170/380 (44%), Gaps = 54/380 (14%)
Query: 276 PNIYVFNSLMN---VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
P+ + F +L++ ++++ + Q++Q G +PD+ +Y ++ C G +DLA +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 333 MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
+ +++ R+K +V ++TII + ++A+ + +M + G+ N V ++SLI
Sbjct: 245 LLNKME----AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
N + G A +L ML PN FN ++ A FF K K++
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDA------------FF---KEGKLV 345
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY 511
+ E + + Q SI P T TYN L+ C +
Sbjct: 346 EA--EKLHEEMIQRSID------------------------PDTITYNLLINGFCMHNRL 379
Query: 512 -HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 570
AK + M + PN T++ LI+ + VE +E+ + M G+ + + YTT
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 571 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
I+ ++ + A ++++M S + + +TY+ LL YG ++ L I++ +QK
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG---KLDTALVIFKYLQK 496
Query: 631 AGYKPNDYYLEELIEEWCEG 650
+ + N + +IE C+
Sbjct: 497 SEMELNIFIYNTMIEGMCKA 516
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 164/364 (45%), Gaps = 27/364 (7%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
++F II K R + A++ + ++ PN+ Y ++I+ G + + + +
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 269 LLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+L +KI PN+ FN+L++ ++ L +++ M + PD +YN+L+ C+ R
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+D A+ M+K + + + ++ TY+T+I F K + +++ +M G+ NTV
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQ----TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
++++I AG + A +F++M+ + ++I+LH + D A F
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 447 KGNKM-LGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
+ ++M L F YN+ + K G + A + S P TYNT
Sbjct: 495 QKSEMELNIF--IYNTMIEGMCKAGKVGEAWDLFCSLS------------IKPDVVTYNT 540
Query: 502 LLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
++ S A L +MK G PN T++ LI + + E++K M +G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 560 IKPD 563
D
Sbjct: 601 FVGD 604
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 154/362 (42%), Gaps = 24/362 (6%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P + +N LL A + +L + ++++ L + D++TYS I F +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG----ISHDLYTYSIFINCFCRRSQLSL 136
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
AL V M G + V SSL+N H+ + A+ L ++M+ G +P+T F ++H
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 429 ACVEACQYDRAFRFFHSW--KGNKM-LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
+ A +G + L ++G N K+G I A + N ++I
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI-- 254
Query: 486 FTERFPFTPTTSTYNTLLKACGSDYYHAKA---LINEMKTVGLSPNQITWSILIDICGGT 542
+NT++ + Y H + L EM+T G+ PN +T++ LI+
Sbjct: 255 -------KANVVIFNTIIDSL-CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
A +L +M + I P+V+ + I + +A L+EEM I P+ +TY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQAE 661
N L+ + + E +Q +++ M PN LI +C+ ++D E E
Sbjct: 367 NLLINGFCMHNRLDEAKQ---MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 662 FS 663
S
Sbjct: 424 MS 425
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 169/375 (45%), Gaps = 23/375 (6%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
P++ Y +++ GLC GD + + + +I N+ +FN++++ R + +
Sbjct: 221 PDLVTYGTVVN--GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
+++ M+ G++P++ +YN L+ C GR A + + LE ++ +V T++ +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM--LEK--KINPNVVTFNAL 334
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAG 415
I F A K+ +M ++ +T+ ++ LIN C H L ++A Q+F+ M+
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL-DEAKQMFKFMVSKD 393
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C PN Q +N +++ + + + F ++G+ + + QG
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN--TVTYTTIIQGFFQAGDCDS 451
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWS 533
Q++S R P TY+ LL S AL+ ++ + N ++
Sbjct: 452 AQMVFKQMVS--NRVP--TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
+I+ V A ++ S+ IKPDV+ Y T I + ++A L+ +MK
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 594 EIHPNWVTYNTLLKA 608
PN TYNTL++A
Sbjct: 565 GTLPNSGTYNTLIRA 579
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 151/358 (42%), Gaps = 49/358 (13%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
+Q +G P + S+ L + C A Y+E+ RL S IIKV
Sbjct: 18 LQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR----NRL-------SDIIKV-- 64
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
A+ + DM + + V ++ L++A A E I L E+M G +
Sbjct: 65 -----DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
++I ++ Q A KM+ GY + I +++ NG+ +S
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLA-----KMMKL---GY-----EPDIVTLSSLLNGYCHS 166
Query: 482 QILSFTE-------RFPFTPTTSTYNTLLKACGSDYYHAKA-----LINEMKTVGLSPNQ 529
+ +S + P T T+ TL+ + H KA L+++M G P+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGL---FLHNKASEAVALVDQMVQRGCQPDL 223
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
+T+ +++ +++ A+ +L M A IK +V+ + T I + ++ + A+ L+ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 590 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
M++ I PN VTYN+L+ YG + + L+ +M + PN LI+ +
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLS---NMLEKKINPNVVTFNALIDAF 338
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 48/309 (15%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M G D+ S+N +L C + RV+ A ++++ L+ GR +D TY+ I+ +
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR-----GRFSVDTVTYNVILNGWC 206
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
K AL+V +M G+N N +++++ AG + A + F EM CE +
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV 266
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
+ ++H A + RA F + +++G +
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVF----------------DEMIREGVL------------- 297
Query: 482 QILSFTERFPFTPTTSTYNTLLKA-CGSD-YYHAKALINEMKTVGLSPNQITWSILIDIC 539
P+ +TYN +++ C D +A + EM G PN T+++LI
Sbjct: 298 ------------PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
E+++ M + G +P+ Y I+ E ++AL L+E+M S + PN
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
Query: 600 VTYNTLLKA 608
TYN L+
Sbjct: 406 DTYNILISG 414
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 142/335 (42%), Gaps = 47/335 (14%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M++L + P ++ I+ + AG+ D A ++ + H + D+ +++TI+ V
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM-HEHGCFQ---DLASFNTILDVLC 172
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+K + A ++ +R +++TV ++ ++N +A+++ +EM+ G PN
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
+N +L A Q A+ FF K + + TTV +GF
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDC-------------EIDVVTYTTVVHGF--- 275
Query: 482 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGG 541
+ A+ + +EM G+ P+ T++ +I +
Sbjct: 276 -----------------------GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 312
Query: 542 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
+NVE A+ + + M G +P+V Y I+ + F + L + M++ PN+ T
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372
Query: 602 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
YN +++ Y EV++ L +++ M PN
Sbjct: 373 YNMMIRY---YSECSEVEKALGLFEKMGSGDCLPN 404
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 12/303 (3%)
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
D ++ I + A L + H MRS + + ++ + A AG ++A++LF
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
M GC + FN IL ++ + ++A+ F + +G + + YN L +
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVT--YNVILNGWCL 207
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLS 526
T P ++L P +TYNT+LK HA EMK
Sbjct: 208 IKRT--PKAL---EVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
+ +T++ ++ G ++ A + M G+ P V Y I+V + N + A+ +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
+EEM PN TYN L++ G E + + Q M+ G +PN +I
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAG---EFSRGEELMQRMENEGCEPNFQTYNMMIRY 379
Query: 647 WCE 649
+ E
Sbjct: 380 YSE 382
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L + + M G+ P++T+YN +LK AG++ A + + E+K + ++DV TY+T
Sbjct: 215 LEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC----EIDVVTYTT 270
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
++ F A + A V +M GV + ++++I VE A+ +FEEM+ G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 416 CEPNTQCFNIILHACVEACQYDRA 439
EPN +N+++ A ++ R
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRG 354
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 159/360 (44%), Gaps = 53/360 (14%)
Query: 282 NSLMNVNS-RDLTYTLNIYQIMQNLGLKP-DMTSYNILLKACCVAGRVDLAQDMYKELKH 339
N+L+ +NS R+ T + +++ L P + YN+ +K+ + L ++M E+
Sbjct: 155 NALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVK 214
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
++LD TYSTII L+ A++ M G+ + V +S++++ + +G
Sbjct: 215 ----DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 400 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY 459
VE+ + L+E + G +P+ F+++ EA YD R+
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYD-GIRY----------------- 312
Query: 460 NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH--AKALI 517
+L + P YNTLL+A G A++L
Sbjct: 313 -----------------------VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLF 349
Query: 518 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 577
NEM GL+PN+ T + L+ I G A+++ + M D I Y T + +C +
Sbjct: 350 NEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADI 409
Query: 578 KNFKQALTLYEEMK-SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
++A L+ +MK S + P+ +Y +L YGS + ++ + ++++M KAG + N
Sbjct: 410 GLEEEAERLFNDMKESVQCRPDNFSYTAMLNI---YGSGGKAEKAMELFEEMLKAGVQVN 466
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 123/241 (51%), Gaps = 9/241 (3%)
Query: 208 HILFCNIISEFGKRRDLIS-ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIY 266
+I + II+ KR +L + A+E ++ + K P+ Y AI+D G + +Y
Sbjct: 221 NITYSTIIT-CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLY 279
Query: 267 EDLLNQKITPNIYVFNSL--MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
E + P+ F+ L M + D + Q M+++ +KP++ YN LL+A A
Sbjct: 280 ERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G+ LA+ ++ E+ LE+ L + T + ++K++ A+ + AL++ +M++ ++
Sbjct: 340 GKPGLARSLFNEM--LEA--GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD 395
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLA-GCEPNTQCFNIILHACVEACQYDRAFRFF 443
+ +++L+N CA GL E+A +LF +M + C P+ + +L+ + ++A F
Sbjct: 396 FILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELF 455
Query: 444 H 444
Sbjct: 456 E 456
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 495 TTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 554
T ST T K C Y A M GL P+++T+S ++D+ + VE + + +
Sbjct: 223 TYSTIITCAKRCNL-YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 555 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
G KPD IA++ K+ E+ ++ + +EMKS ++ PN V YNTLL+A + G
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG- 340
Query: 615 VLEVQQCLAIYQDMQKAGYKPNDYYLEELIE-----EWCEGVIQDNREYQAE 661
+ +++ +M +AG PN+ L L++ W +Q E +A+
Sbjct: 341 --KPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 48/293 (16%)
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
++ M GL PD +Y+ +L +G+V+ +Y+ + G K D +S + K
Sbjct: 244 FERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYE---RAVATG-WKPDAIAFSVLGK 299
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
+F +A + V +M+S V N V +++L+ A AG A LF EML AG P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
N + ++ +A A + + K K F
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDF----------------------- 396
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMK-TVGLSPNQITWSIL 535
IL YNTLL C +A L N+MK +V P+ +++ +
Sbjct: 397 ----IL--------------YNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAM 438
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 588
++I G E A+E+ + M AG++ +V+ T ++ ++K + +++
Sbjct: 439 LNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 153/346 (44%), Gaps = 50/346 (14%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
I ++ + I N V+N+LM+ S + ++ M++ GLKP +YNIL+ A
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK-LWQMALKVKHDMRSAGV 381
+ D+ + + L+ +E +G L+ +V +Y+ +I + K + MA M+ G+
Sbjct: 426 RRMQPDIVETL---LREMEDLG-LEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
++ ++++LI+A + +G E+A FEEM G +P+ + + +L A
Sbjct: 482 KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA------------ 529
Query: 442 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
F S K++ +I R T TYNT
Sbjct: 530 FRRSGDTGKLM-----------------------------EIWKLMLREKIKGTRITYNT 560
Query: 502 LLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
LL Y A+ +++E +GL P+ +T+++L++ ++LK M
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 605
+KPD I Y+T I V ++FK+A ++ M P+ +Y L
Sbjct: 621 LKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 149/359 (41%), Gaps = 56/359 (15%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG-RLKLDVFTYSTI 356
+Y+ M + + PD + IL+ AGR A+++++ + + G + DVF +
Sbjct: 295 VYEAMDKINVYPDNVTCAILITTLRKAGRS--AKEVWEIFEKMSEKGVKWSQDVF--GGL 350
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
+K F D L + AL ++ +M G+ NT+ +++L++A + +E+ LF EM G
Sbjct: 351 VKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL 410
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
+P+ +NI++ A Q D
Sbjct: 411 KPSAATYNILMDAYARRMQPDIV------------------------------------- 433
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKACG-----SDYYHAKALINEMKTVGLSPNQIT 531
+L E P +Y L+ A G SD A A + MK VGL P+ +
Sbjct: 434 ----ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM-AADAFLR-MKKVGLKPSSHS 487
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
++ LI + E A + M GIKP V YT+ + S + + + +++ M
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLML 547
Query: 592 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
+I +TYNTLL +K G +E + ++ + M G +P+ L+ + G
Sbjct: 548 REKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKM---GLQPSVMTYNMLMNAYARG 603
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 192/436 (44%), Gaps = 35/436 (8%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQI 301
Y Y +ID G G ++ ++ +L + I P FN+++++ N+ L ++ +
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT 358
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M+ L PD +YNIL+ ++ A +KE+K LK D +Y T++ F+
Sbjct: 359 MK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKD----DGLKPDPVSYRTLLYAFS 413
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ + A + +M V ++ S+L A ++E++ F+ +AG +++
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSE 472
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
++ + A E A R F + N + +N G S S
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQ------------EVNKRTVIEYNVMIKAYGISKS 520
Query: 482 -----QILSFTERFPFTPTTSTYNTLLKACGS-DYYH-AKALINEMKTVGLSPNQITWSI 534
++ + TP TYNTL++ S D H + + +M+ G + I +
Sbjct: 521 CEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCA 580
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
+I + A E+ K M + I+PDV+ Y I ++ N +QA++ E MK
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYK---PNDYYLEELIEEWCEGV 651
I N V YN+L+K +K G + E + AIY+ + ++ K P+ Y +I + E
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAE---AIYRKLLQSCNKTQYPDVYTSNCMINLYSERS 697
Query: 652 IQDNREYQAEFSSIKK 667
+ R+ +A F S+K+
Sbjct: 698 MV--RKAEAIFDSMKQ 711
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 151/364 (41%), Gaps = 48/364 (13%)
Query: 246 YRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYV-FNSLMNVN--SRDLTYTLNIYQIM 302
Y A IDA G G ++ ++ + Q++ + +N ++ S+ +++ M
Sbjct: 474 YSANIDAYGERGYLSEAERVF--ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 303 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 362
+ G+ PD +YN L++ + D+ L+ + G + D Y +I F
Sbjct: 532 MSYGVTPDKCTYNTLVQ---ILASADMPHKGRCYLEKMRETGYVS-DCIPYCAVISSFVK 587
Query: 363 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 422
MA +V +M + + V + LINA A G V+QA+ E M AG N+
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 423 FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF-SNS 481
+N ++ + D A + K+L S N T P+ + SN
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYR-----KLLQSC--------------NKTQYPDVYTSNC 688
Query: 482 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGG 541
I ++ER S A+A+ + MK G N+ T+++++ +
Sbjct: 689 MINLYSER------------------SMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKK 729
Query: 542 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
E A +I K M + I D ++Y + + + FK+A+ ++EM S I P+ T
Sbjct: 730 NGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDST 789
Query: 602 YNTL 605
+ +L
Sbjct: 790 FKSL 793
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 15/238 (6%)
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
+S G +L+V Y+ ++++ A W+ + +M G+ + +LI+ + G
Sbjct: 177 FKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGG 236
Query: 400 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY 459
L A+ +M G +P+ I+L +A ++ +A FF W ++
Sbjct: 237 LKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE------NKA 290
Query: 460 NSNLKQGSIHNATTVPNGFSNSQILSFTERFP------FTPTTSTYNTLLKACGSDYYHA 513
+S++ S T + + QI +E F PTT T+NT++ G++
Sbjct: 291 DSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN-GQL 349
Query: 514 KALINEMKTVGL--SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT 569
+ + MKT+ L +P+ T++ILI + ++E A K M D G+KPD ++Y T
Sbjct: 350 GEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 153/356 (42%), Gaps = 51/356 (14%)
Query: 246 YRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV-NSRDLTYTLNIY-QIMQ 303
Y +I A G+ K+ ++E +++ +TP+ +N+L+ + S D+ + Y + M+
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 304 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA 363
G D Y ++ + G++++A+++YKE+ ++ DV Y +I FAD
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY----NIEPDVVVYGVLINAFADT 623
Query: 364 KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE----PN 419
Q A+ M+ AG+ N+V ++SLI G +++A ++ + LL C P+
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRK-LLQSCNKTQYPD 682
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 479
N +++ E +A F S K GE N F+
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQR------GEA-----------------NEFT 719
Query: 480 NSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDIC 539
+ +L ++ + A + +M+ + + + ++++ ++ +
Sbjct: 720 FAMMLCMYKK-----------------NGRFEEATQIAKQMREMKILTDPLSYNSVLGLF 762
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
+ A+E K M +GI+PD + + + ++ K+A+ EE++ EI
Sbjct: 763 ALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 108/220 (49%), Gaps = 10/220 (4%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
I +C +IS F K L A E Y + ++ P++ +Y +I+A G+ ++ E
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 269 LLNQKITPNIYVFNSLMNVNSR--DLTYTLNIY-QIMQ--NLGLKPDMTSYNILLKACCV 323
+ I N ++NSL+ + ++ L IY +++Q N PD+ + N ++
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
V A+ ++ +K R + + FT++ ++ ++ ++ A ++ MR +
Sbjct: 696 RSMVRKAEAIFDSMKQ-----RGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILT 750
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 423
+ ++++S++ A G ++A++ F+EM+ +G +P+ F
Sbjct: 751 DPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTF 790
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 174/389 (44%), Gaps = 30/389 (7%)
Query: 239 DGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTL 296
D + + Y +ID G F + ++ + + ++ + +I F L+ V + + +
Sbjct: 147 DHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAV 206
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
+ + M++ G PD +++I++ R AQ + LK R + DV Y+ +
Sbjct: 207 HCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-----DRFEPDVIVYTNL 261
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
++ + A A KV +M+ AG+ N +S +I+A G + +A +F +ML +GC
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL------KQGSIHN 470
PN FN ++ V+A + ++ + ++ K LG + N + ++ N
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQMKK---LGCEPDTITYNFLIEAHCRDENLEN 378
Query: 471 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPN 528
A V N + ST+NT+ + D A + ++M PN
Sbjct: 379 AVKVLNTMIKKKC---------EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPN 429
Query: 529 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 588
+T++IL+ + G+++ + +++ K M D ++P+V Y + + ++ A L++
Sbjct: 430 TVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFK 489
Query: 589 EM--KSCEIHPNWVTYNTLLKARSKYGSV 615
EM + C + P+ Y +L + G +
Sbjct: 490 EMVEEKC-LTPSLSLYEMVLAQLRRAGQL 517
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 148/335 (44%), Gaps = 25/335 (7%)
Query: 117 WTVIDTLKKVQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARFQLPIR 176
W +ID L K + +EIS+ + RR V +G +EAV + + +
Sbjct: 171 WHLID-LMKSRNVEISI---------ETFTILIRRYVRAGLASEAVHCFNRMEDYGC-VP 219
Query: 177 ELVQPSDMIKRCVLSRNPKLAVRYASLLPHAH----ILFCNIISEFGKRRDLISALEAYD 232
+ + S +I R A + L I++ N++ + + ++ A + +
Sbjct: 220 DKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 233 ALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR-- 290
+K PN+Y Y +IDA CG ++ ++ D+L+ PN FN+LM V+ +
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 291 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 350
L +Y M+ LG +PD +YN L++A C +++ +K L ++ + K +V
Sbjct: 340 RTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC------RDENLENAVKVLNTMIKKKCEV 393
Query: 351 --FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
T++TI + + A ++ M A NTV ++ L+ + + +++
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+EM EPN + +++ ++ A++ F
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 517 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 576
N M+ G P++I +SI+I A S+ D +PDVI YT ++
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCR 267
Query: 577 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ +A +++EMK I PN TY+ ++ A + G ++ + ++ DM +G PN
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG---QISRAHDVFADMLDSGCAPN 324
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 513 AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 572
A++ + +K P+ I ++ L+ + A ++ K M AGI+P+V Y+ I
Sbjct: 240 AQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVID 298
Query: 573 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
+A ++ +M PN +T+N L++ K G ++ L +Y M+K G
Sbjct: 299 ALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG---RTEKVLQVYNQMKKLG 355
Query: 633 YKPNDYYLEELIEEWC 648
+P+ LIE C
Sbjct: 356 CEPDTITYNFLIEAHC 371
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 161/352 (45%), Gaps = 24/352 (6%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M++ G++PD+ ++ + + C AG + A + +LK + D + S++I F
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG----ISQDSVSVSSVIDGFC 352
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ A+K+ H R + N +SS ++ G + +A +F+E+ G P+
Sbjct: 353 KVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 422 CFNIILHACVEACQYDRAFRFFHSW--KGNK-MLGSFGEGYNSNLKQGSIHNATTVPNGF 478
C+ ++ + D+AF++F + GN L + + + GSI +A +V F
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV---F 466
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILI 536
N + TE T YN L+ G + K LI+EM++ G+SP+ T++ILI
Sbjct: 467 RNMK----TEGLKLDVVT--YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
++ A EI+ + G P +A+T I + +F++A L+ M +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 597 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
P+ VT + LL Y +++ + ++ + AG KP+ LI +C
Sbjct: 581 PDVVTCSALLHG---YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 53/340 (15%)
Query: 273 KITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
++ PNI+V++S ++ ++ D+ I+Q + LGL PD Y ++ C GR D A
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM--ALKVKHDMRSAGVNLNTVAW 388
+ L L+S L T STI+ + A ++ + A V +M++ G+ L+ V +
Sbjct: 428 FQYFGAL--LKSGNPPSL---TTSTIL-IGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
++L++ + + +L +EM AG P+ +NI++H+ V D A
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA--------- 532
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG- 507
++I+S R F P+T + ++
Sbjct: 533 --------------------------------NEIISELIRRGFVPSTLAFTDVIGGFSK 560
Query: 508 -SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
D+ A L M + + P+ +T S L+ + +E AI + + DAG+KPDV+
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
Y T I + ++A L M + PN T++ L+
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 139/309 (44%), Gaps = 32/309 (10%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQ 300
PN+++Y + + GD +++ I++++ + P+ + ++++ +L T +Q
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID-GYCNLGRTDKAFQ 429
Query: 301 IMQNL---GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
L G P +T+ IL+ AC G + A+ +++ +K LKLDV TY+ ++
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK----TEGLKLDVVTYNNLM 485
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ ++ +MRSAG++ + ++ LI++ G +++A ++ E++ G
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK-QGSIHNATTVPN 476
P+T F ++ + + AF + Y ++L+ + + + + +
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWF--------------YMADLRMKPDVVTCSALLH 591
Query: 477 GFSNSQ-----ILSFTERFP--FTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSP 527
G+ +Q I+ F + P YNTL+ S D A LI M G+ P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 528 NQITWSILI 536
N+ T L+
Sbjct: 652 NESTHHALV 660
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 170/410 (41%), Gaps = 39/410 (9%)
Query: 265 IYEDLLNQKITPNIY--VFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+ +DL +I + VF+ L++ + R + L + + G+ P LLK
Sbjct: 186 VMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKE 245
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA----KLWQMALKVKHDM 376
++LA++ ++H+ S GR L+ S I+ + K W++ + +KH
Sbjct: 246 ILRVHGLELAREF---VEHMLSRGR-HLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH-- 299
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
G+ + VA++ I+ AG +++A + ++ L G ++ + ++ + +
Sbjct: 300 --YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 437 DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT--P 494
+ A + HS++ + + ++ G + A+T+ F E F P
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTI-----------FQEIFELGLLP 406
Query: 495 TTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
Y T++ + KA + G P+ T +ILI C ++ A +
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
++M G+K DV+ Y + ++ + L +EM+S I P+ TYN L+ +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEF 662
G + E + I ++ + G+ P+ ++I G ++Q F
Sbjct: 527 GYIDEANE---IISELIRRGFVPSTLAFTDVI-----GGFSKRGDFQEAF 568
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 161/352 (45%), Gaps = 24/352 (6%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M++ G++PD+ ++ + + C AG + A + +LK + D + S++I F
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG----ISQDSVSVSSVIDGFC 352
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ A+K+ H R + N +SS ++ G + +A +F+E+ G P+
Sbjct: 353 KVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 422 CFNIILHACVEACQYDRAFRFFHSW--KGNK-MLGSFGEGYNSNLKQGSIHNATTVPNGF 478
C+ ++ + D+AF++F + GN L + + + GSI +A +V F
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV---F 466
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILI 536
N + TE T YN L+ G + K LI+EM++ G+SP+ T++ILI
Sbjct: 467 RNMK----TEGLKLDVVT--YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
++ A EI+ + G P +A+T I + +F++A L+ M +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 597 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
P+ VT + LL Y +++ + ++ + AG KP+ LI +C
Sbjct: 581 PDVVTCSALLHG---YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC 629
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 53/340 (15%)
Query: 273 KITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
++ PNI+V++S ++ ++ D+ I+Q + LGL PD Y ++ C GR D A
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM--ALKVKHDMRSAGVNLNTVAW 388
+ L L+S L T STI+ + A ++ + A V +M++ G+ L+ V +
Sbjct: 428 FQYFGAL--LKSGNPPSL---TTSTIL-IGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
++L++ + + +L +EM AG P+ +NI++H+ V D A
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA--------- 532
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG- 507
++I+S R F P+T + ++
Sbjct: 533 --------------------------------NEIISELIRRGFVPSTLAFTDVIGGFSK 560
Query: 508 -SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
D+ A L M + + P+ +T S L+ + +E AI + + DAG+KPDV+
Sbjct: 561 RGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVL 620
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
Y T I + ++A L M + PN T++ L+
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 139/309 (44%), Gaps = 32/309 (10%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQ 300
PN+++Y + + GD +++ I++++ + P+ + ++++ +L T +Q
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID-GYCNLGRTDKAFQ 429
Query: 301 IMQNL---GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
L G P +T+ IL+ AC G + A+ +++ +K LKLDV TY+ ++
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK----TEGLKLDVVTYNNLM 485
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ ++ +MRSAG++ + ++ LI++ G +++A ++ E++ G
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK-QGSIHNATTVPN 476
P+T F ++ + + AF + Y ++L+ + + + + +
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWF--------------YMADLRMKPDVVTCSALLH 591
Query: 477 GFSNSQ-----ILSFTERFP--FTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSP 527
G+ +Q I+ F + P YNTL+ S D A LI M G+ P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 528 NQITWSILI 536
N+ T L+
Sbjct: 652 NESTHHALV 660
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 170/410 (41%), Gaps = 39/410 (9%)
Query: 265 IYEDLLNQKITPNIY--VFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+ +DL +I + VF+ L++ + R + L + + G+ P LLK
Sbjct: 186 VMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKE 245
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA----KLWQMALKVKHDM 376
++LA++ ++H+ S GR L+ S I+ + K W++ + +KH
Sbjct: 246 ILRVHGLELAREF---VEHMLSRGR-HLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH-- 299
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
G+ + VA++ I+ AG +++A + ++ L G ++ + ++ + +
Sbjct: 300 --YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKP 357
Query: 437 DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT--P 494
+ A + HS++ + + ++ G + A+T+ F E F P
Sbjct: 358 EEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTI-----------FQEIFELGLLP 406
Query: 495 TTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
Y T++ + KA + G P+ T +ILI C ++ A +
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
++M G+K DV+ Y + ++ + L +EM+S I P+ TYN L+ +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEF 662
G + E + I ++ + G+ P+ ++I G ++Q F
Sbjct: 527 GYIDEANE---IISELIRRGFVPSTLAFTDVI-----GGFSKRGDFQEAF 568
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 183/429 (42%), Gaps = 55/429 (12%)
Query: 199 RYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKK-HLDGPNMYIYRAIIDACGLCG 257
+Y +L P A + + E K SAL+ ++ L+K H P Y + G C
Sbjct: 102 KYLTLWPKAVL---EALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCK 158
Query: 258 DFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLG-LKPDMTSY 314
++ ++E +L++ + P I V+ SL++V + L + + M+++ KPD+ ++
Sbjct: 159 QPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTF 218
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
+L+ CC GR DL + + E+ +L VG TY+TII + A +++ V
Sbjct: 219 TVLISCCCKLGRFDLVKSIVLEMSYL-GVG---CSTVTYNTIIDGYGKAGMFEEMESVLA 274
Query: 375 DMRSAGVNLNTV-AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 433
DM G +L V +S+I + + + + + L G +P+ FNI++ + +A
Sbjct: 275 DMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKA 334
Query: 434 CQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 493
Y + ++ F E+ F+
Sbjct: 335 GMYKKM-----------------------------------------CSVMDFMEKRFFS 353
Query: 494 PTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 551
TT TYN +++ G K + +MK G+ PN IT+ L++ V +
Sbjct: 354 LTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSV 413
Query: 552 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 611
L+ + ++ + D + I ++ + LY +M+ + P+ +T+ T++K +
Sbjct: 414 LRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTA 473
Query: 612 YGSVLEVQQ 620
+G VQ+
Sbjct: 474 HGIFDAVQE 482
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 134/327 (40%), Gaps = 80/327 (24%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++++M + GLKP + Y L+ V G+ +L + L++++SV K DVFT++ +I
Sbjct: 166 LFEVMLSEGLKPTIDVYTSLIS---VYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLI 222
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ + + +M GV +TV ++++I+ AG+ E+ + +M+ G
Sbjct: 223 SCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG-- 280
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
+ + C N ++GS+G G N + +
Sbjct: 281 ----------DSLPDVCTL------------NSIIGSYGNG----------RNMRKMESW 308
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK--ALINEMKTVGLSPNQITWSIL 535
+S Q++ P +T+N L+ + G + K ++++ M+ S +T++I+
Sbjct: 309 YSRFQLMGVQ------PDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIV 362
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
I+ G +E ++ + M G+K
Sbjct: 363 IETFGKAGRIEKMDDVFRKMKYQGVK---------------------------------- 388
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCL 622
PN +TY +L+ A SK G V+++ L
Sbjct: 389 -PNSITYCSLVNAYSKAGLVVKIDSVL 414
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 492 FTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGA- 548
+ P TY L K G+ A L M + GL P ++ LI + G +E ++ A
Sbjct: 140 YEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAF 199
Query: 549 --IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
+E +KS+ D KPDV +T I C + F ++ EM + + VTYNT++
Sbjct: 200 STLEYMKSVSDC--KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTII 257
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAG 632
K G E++ LA DM + G
Sbjct: 258 DGYGKAGMFEEMESVLA---DMIEDG 280
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 178/429 (41%), Gaps = 56/429 (13%)
Query: 246 YRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQ 303
+ +ID G G + ++ ++L + + FN++++ L+ ++ + M+
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 304 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA 363
G+ PD +YNILL AG ++ A + Y++++ VG L D T+ ++ +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIR---KVG-LFPDTVTHRAVLHILCQR 423
Query: 364 KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 423
K+ V +M + ++ + ++ + GLV QA LFE L C ++
Sbjct: 424 KMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL-DCVLSSTTL 482
Query: 424 NIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQI 483
++ E + A F+ G + + +G N +
Sbjct: 483 AAVIDVYAEKGLWVEAETVFY---GKRNM-----------------------SGQRNDVL 516
Query: 484 LSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGG 541
YN ++KA G H KA L MK G P++ T++ L + G
Sbjct: 517 --------------EYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAG 562
Query: 542 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
+ V+ A IL M D+G KP Y I V A+ LYE M+ + PN V
Sbjct: 563 VDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV 622
Query: 602 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQA 660
Y +L+ ++ G V E Q ++ M++ G + N L LI+ + + G +++ R
Sbjct: 623 YGSLINGFAESGMVEEAIQ---YFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV-- 677
Query: 661 EFSSIKKSE 669
+ +K SE
Sbjct: 678 -YDKMKDSE 685
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 184/462 (39%), Gaps = 77/462 (16%)
Query: 205 PHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
P F +I +GK L A + + K + + +I CG G ++
Sbjct: 302 PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAES 361
Query: 265 IYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
+ + + + I+P+ +N L+++ ++ D+ L Y+ ++ +GL PD ++ +L C
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 323 VAGRVDLAQDMYKEL--------KHLESV------------------GRLKLDVFTYST- 355
V + + E+ +H V R +LD ST
Sbjct: 422 QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT 481
Query: 356 ---IIKVFADAKLWQMALKVKHDMRS-AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
+I V+A+ LW A V + R+ +G + + ++ +I A A L E+A+ LF+ M
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 412 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 471
G P+ +N + D A R E +S K G A
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRI------------LAEMLDSGCKPGCKTYA 589
Query: 472 TTVPNGFSNSQILSFTERFPFTPTTSTYNTL-LKACGSDYYHAKALINEMKTVGLSPNQI 530
+ ++Y L L + D Y A M+ G+ PN++
Sbjct: 590 AMI----------------------ASYVRLGLLSDAVDLYEA------MEKTGVKPNEV 621
Query: 531 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 590
+ LI+ + VE AI+ + M + G++ + I T+ IK + ++A +Y++M
Sbjct: 622 VYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Query: 591 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
K E P+ N++L + G V E + +I+ +++ G
Sbjct: 682 KDSEGGPDVAASNSMLSLCADLGIVSEAE---SIFNALREKG 720
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 18/292 (6%)
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
+V Y+ +++ A W +M GV + L++ AGLV++A+
Sbjct: 144 NVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWI 203
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
+ M P+ ++ + ++DRA RFF W K+ + + K GS
Sbjct: 204 KHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDL-DSIDDFPKNGSA 262
Query: 469 HNATTVPNGFS--------------NSQILSFTERFPFTPT-TSTYNTLLKACG--SDYY 511
+ + S + S ++ P P TST+NTL+ G
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 512 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
A L +EM G+ + +T++ +I CG ++ A +LK M + GI PD Y +
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 623
+ ++ + + AL Y +++ + P+ VT+ +L + V EV+ +A
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIA 434
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 153/365 (41%), Gaps = 49/365 (13%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
+ +I+ + + L A++ Y+A++K PN +Y ++I+ G ++ + +
Sbjct: 588 YAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME 647
Query: 271 NQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
+ N V SL+ S+ L +Y M++ PD+ + N +L C G V
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVS 707
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
A+ ++ L+ + DV +++T++ ++ + A++V +MR +G+ + ++
Sbjct: 708 EAESIFNALRE-----KGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSF 762
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
+ ++ A G + + +LF EML+ +R + W
Sbjct: 763 NQVMACYAADGQLSECCELFHEMLV-----------------------ER--KLLLDWGT 797
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 508
K L + LK+G VP+ + ++ E P T + TL A G
Sbjct: 798 FKTLFTL-------LKKGG------VPSEAVSQLQTAYNEAKPLA-TPAITATLFSAMGL 843
Query: 509 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI--A 566
Y +A E+ + + ++ +I + +++ A++ M + G++PD++ A
Sbjct: 844 -YAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQA 902
Query: 567 YTTAI 571
Y I
Sbjct: 903 YLVGI 907
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 122/287 (42%), Gaps = 22/287 (7%)
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
DV Y+ +IK + AKL + AL + M++ G + ++SL A LV++A ++
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW-----KGNKMLGSFGEGYNSNL 463
EML +GC+P + + ++ + V A + + K N+++ +G N
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV--YGSLINGFA 631
Query: 464 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMK 521
+ G + A Q E +L+KA A+ + ++MK
Sbjct: 632 ESGMVEEAI---------QYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
P+ + ++ +C V A I ++ + G DVI++ T + +
Sbjct: 683 DSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLD 741
Query: 582 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
+A+ + EEM+ + + ++N ++ Y + ++ +C ++ +M
Sbjct: 742 EAIEVAEEMRESGLLSDCTSFNQVMAC---YAADGQLSECCELFHEM 785
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 210/486 (43%), Gaps = 66/486 (13%)
Query: 204 LPHAHILFCNI-ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKS 262
LP + + N+ + F K L A +++++++ D ++ Y + G F+++
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 263 RYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+ + + ++ I P+IY +N LM+ + L+ I +M+ G+ PD +Y LL
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM-----ALKVKHD 375
C G+VD A+ + +E+ + + +T + ++ LW+M A ++
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLP----NAYTCNILLH-----SLWKMGRISEAEELLRK 456
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG-------------------- 415
M G L+TV + +++ +G +++AI++ + M + G
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 416 ---CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSI 468
C P+ ++ +L+ +A ++ A F G K L YN + KQG I
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK-LQPDSVAYNIFIHHFCKQGKI 575
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLS 526
+A ++L E+ + TYN+L+ G + + L++EMK G+S
Sbjct: 576 SSAF---------RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
PN T++ I E VE A +L M I P+V ++ I+ + +F A +
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 587 YEEMKS-CEIHPNWVT--YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEEL 643
+E S C + +N LL A G +L+ + L D G++ + ++L
Sbjct: 687 FETAVSICGQKEGLYSLMFNELLAA----GQLLKATELLEAVLD---RGFELGTFLYKDL 739
Query: 644 IEEWCE 649
+E C+
Sbjct: 740 VESLCK 745
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/438 (20%), Positives = 183/438 (41%), Gaps = 44/438 (10%)
Query: 226 SALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQ----KITPNIYVF 281
+A E +D + + PN + + ++ G C + + + +LLN + PN ++
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVR--GYCKAGLTDKGL--ELLNAMESFGVLPNKVIY 220
Query: 282 NSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH 339
N++++ R+ + + + M+ GL PD+ ++N + A C G+V A ++ +++
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
E +G + + TY+ ++K F L + A + +R + +++ + G
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340
Query: 400 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY 459
+A + ++M G P+ +NI++ + A K N G
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN------GVCP 394
Query: 460 NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALI 517
++ +H +V + +L R P T N LL + A+ L+
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 518 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM---GDAGIK------------- 561
+M G + +T +I++D G+ ++ AIEI+K M G A +
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514
Query: 562 -------PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
PD+I Y+T + ++ F +A L+ EM ++ P+ V YN + K G
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG- 573
Query: 615 VLEVQQCLAIYQDMQKAG 632
++ + +DM+K G
Sbjct: 574 --KISSAFRVLKDMEKKG 589
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/455 (18%), Positives = 187/455 (41%), Gaps = 28/455 (6%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
F ++ + + L AL+ +++ PN+ I ID K+ E +
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 271 NQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
I PN+ +N ++ + + + + + M + G PD SY ++ C R+
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVF-----ADAKLWQMALKVKHDMRSAGVNL 383
+D+ K++ L D TY+T+I + AD LW + D + G +
Sbjct: 365 EVRDLMKKMAKEHG---LVPDQVTYNTLIHMLTKHDHADEALWFLK-----DAQEKGFRI 416
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAG-CEPNTQCFNIILHACVEACQYDRAFRF 442
+ + +S++++A G + +A L EML G C P+ + +++ + D+A +
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
+++ + G N+ ++ ++++ +E ++P + TY+ +
Sbjct: 477 L------QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI 530
Query: 503 LKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
+ + ++A ++ EM G P + ++L+ A + ++ + G
Sbjct: 531 MHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGC 590
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
+V+ +TT I ++ AL++ ++M H + TY TL+ K G + E +
Sbjct: 591 AINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATE 650
Query: 621 CLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQD 654
+ + M G P +I +C+ G + D
Sbjct: 651 ---LMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 682
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 7/187 (3%)
Query: 482 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDIC 539
++L+ +R P NT + KAL + M+ VG+ PN +T++ +I
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPN 598
VE AIE+L+ M G PD ++Y T + + K + L ++M K + P+
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382
Query: 599 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC-EGVIQDNRE 657
VTYNTL+ +K+ + L +D Q+ G++ + ++ C EG + + ++
Sbjct: 383 QVTYNTLIHMLTKHD---HADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 658 YQAEFSS 664
E S
Sbjct: 440 LINEMLS 446
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 170/378 (44%), Gaps = 23/378 (6%)
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
P+I SL+N +++ M G P++ YN ++ C ++ A ++
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
+ +E G ++ D TY+T+I +++ W A ++ DM ++ N + +++LI+
Sbjct: 207 FY---CMEKKG-IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 394 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKML 452
G + +A L++EM+ PN +N +++ C+ C D + F + M+
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF------DLMV 316
Query: 453 --GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSD 509
G F + N + V +G +++ TYNTL+ C +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ---GLVGDAFTYNTLIHGYCQAG 373
Query: 510 YYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
+ A+ + N M G+SP+ +T++IL+D +E A+ +++ + + + D+I Y
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
I+ + K+A L+ + + P+ + Y T++ + G E + + + M
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK---LCRRM 490
Query: 629 QKAGYKPNDYYLEELIEE 646
++ G+ P++ +E + +
Sbjct: 491 KEDGFMPSERIYDETLRD 508
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 116/219 (52%), Gaps = 13/219 (5%)
Query: 232 DALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNS-- 289
D +K+ +D PN+ + A+ID G+ +++R +Y++++ + + PN++ +NSL+N
Sbjct: 244 DMVKRKID-PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 290 ---RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 346
D Y ++ +M + G PD+ +YN L+ C + RV+ ++ E+ + VG
Sbjct: 303 GCLGDAKY---MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG-- 357
Query: 347 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 406
D FTY+T+I + A +A KV + M GV+ + V ++ L++ + G +E+A+
Sbjct: 358 --DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 407 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
+ E++ + + + +NII+ + A+ F S
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 186/453 (41%), Gaps = 46/453 (10%)
Query: 256 CGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTS 313
C F + ++ ++L + P+I F ++ V ++ + +Y M+NLG+ D+ S
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 314 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVK 373
+ IL+ C R L + +G + + T +++ F +Q A+ +
Sbjct: 117 FTILIHCFC---RCSRLSLALALLGKMMKLG-FRPSIVTLGSLLNGFCQGNRFQEAVSLV 172
Query: 374 HDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 433
M G N V ++++IN + A+++F M G + +N ++ +
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
Query: 434 CQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF 490
++ A R K+ + F ++ +K+G++ A + ++
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV------ 286
Query: 491 PFTPTTSTYNTLLKA-----CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 545
P TYN+L+ C D AK + + M + G P+ +T++ LI ++ V
Sbjct: 287 ---PNVFTYNSLINGFCIHGCLGD---AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 546 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 605
E +++ M G+ D Y T I ++ A ++ M C + P+ VTYN L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 606 LKARSKYGSVLEVQQCLAIYQDMQKAGYKPN--DYYL--------EELIEEWC------- 648
L G ++++ L + +D+QK+ + Y + ++L E WC
Sbjct: 401 LDCLCNNG---KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457
Query: 649 EGVIQDNREYQAEFSSIKKSELERPQSLLLEKI 681
+GV D Y S + + L+R L ++
Sbjct: 458 KGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+++ +I+ K RDL +ALE + ++K + Y +I G + + + D
Sbjct: 185 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
++ +KI PN+ F +L++ V +L N+Y+ M + P++ +YN L+ C+ G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ A+ M+ + S G DV TY+T+I F +K + +K+ +M G+ +
Sbjct: 305 LGDAKYMFDL---MVSKGCFP-DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 427
+++LI+ AG + A ++F M+ G P+ +NI+L
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 12/263 (4%)
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
H + A LF EML + P+ F +L + ++D +H + LG
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN---LGISH 112
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-GSDYYHAK 514
+ Y+ + IH +L + F P+ T +LL C G+ + A
Sbjct: 113 DLYSFTI---LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 515 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 574
+L++ M G PN + ++ +I+ ++ A+E+ M GI+ D + Y T I
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 575 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYK 634
S + A L +M +I PN + + L+ K G++LE + +Y++M +
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN---LYKEMIRRSVV 286
Query: 635 PNDYYLEELIEEWC-EGVIQDNR 656
PN + LI +C G + D +
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAK 309
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 175/409 (42%), Gaps = 71/409 (17%)
Query: 230 AYDALKKHLD---GPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSL 284
A++ ++ LD P++ Y ++ CG C G+ + +D+L++ N + S+
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILL--CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 285 MN---VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
M + + L+++ M+ GL PD+ +Y+I++ C G+ D+A +Y E+
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM---- 424
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
R+ + T+ ++ + A + + S+G L+ V ++ +I+ A +G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 461
E+A++LF+ ++ G P+ FN +++ GY
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIY-----------------------------GY-- 513
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA---CGSDYYHAKALIN 518
K +I A +IL + + P+ +Y TL+ A CG + L
Sbjct: 514 -CKTQNIAEA---------RKILDVIKLYGLAPSVVSYTTLMDAYANCG-NTKSIDELRR 562
Query: 519 EMKTVGLSPNQITWSILID-ICGGTEN-----------VEGAIEILKSMGDAGIKPDVIA 566
EMK G+ P +T+S++ +C G ++ E + L+ M GI PD I
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
Y T I+ K+ A E MKS + + TYN L+ + YG +
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 185/423 (43%), Gaps = 57/423 (13%)
Query: 240 GPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN----VNSRDLTYT 295
GP++ + +I+ G ++ + +L + P++Y N L+N V S +
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS--IAEA 276
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L + M G++PD +YNIL K + G + A ++ +++ L DV TY+
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD----KGLSPDVITYTI 332
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTV-AWSSLINACAHAGLVEQAIQLFEEMLLA 414
++ M L + DM S G LN++ S +++ G +++A+ LF +M
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 415 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 474
G P+ ++I++H + ++D A W ++M
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMAL-----WLYDEM----------------------- 424
Query: 475 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITW 532
+ +IL P + T+ LL C A++L++ + + G + + + +
Sbjct: 425 ----CDKRIL---------PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 533 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
+I+ID + +E A+E+ K + + GI P V + + I +++N +A + + +K
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 593 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVI 652
+ P+ V+Y TL+ A + G+ + + + ++M+ G P + + + C G
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 653 QDN 655
+N
Sbjct: 589 HEN 591
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 164/395 (41%), Gaps = 54/395 (13%)
Query: 209 ILFCNI-ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYI 265
I+ C++ +S K + AL ++ +K P++ Y +I GLC G F + ++
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH--GLCKLGKFDMALWL 420
Query: 266 YEDLLNQKITPNIYVFNSL--------MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNIL 317
Y+++ +++I PN +L M + +R L +L + G D+ YNI+
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL------ISSGETLDIVLYNIV 474
Query: 318 LKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
+ +G ++ A +++K + +E+ + V T++++I + + A K+ ++
Sbjct: 475 IDGYAKSGCIEEALELFKVV--IET--GITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 378 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
G+ + V++++L++A A+ G + +L EM G P +++I
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG---- 586
Query: 438 RAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTS 497
WK E KQG L E P
Sbjct: 587 --------WKHENCNHVLRERIFEKCKQG-----------------LRDMESEGIPPDQI 621
Query: 498 TYNTLLK-ACGSDYYHAKALINE-MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
TYNT+++ C + + E MK+ L + T++ILID + A + S+
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681
Query: 556 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 590
+ + AYTT IK + + A+ L+ ++
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 114/296 (38%), Gaps = 68/296 (22%)
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
+ W L+ + +V+ ++ + ++M +TQ +N +L +H
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL---------------YHF 169
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ-------ILSFTERFPFTPTTST 498
+ +KM + E +K + H +TV +G Q L +E P+ +
Sbjct: 170 RETDKMWDVYKE-----IKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 499 YNTLLKA-------------------CG---SDYYH---------------AKALINEMK 521
+N+++ CG S Y H A L ++M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
G+ P+ +T++IL + GA E+++ M D G+ PDVI YT + + N
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 582 QALTLYEEMKSCEIHPNWVT-YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
L L ++M S N + + +L K G + + L+++ M+ G P+
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG---RIDEALSLFNQMKADGLSPD 397
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 176/411 (42%), Gaps = 56/411 (13%)
Query: 234 LKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNS-RDL 292
L+K P++ + +IDA G + ++ +Y LL + P + L+ L
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 293 TYTLNIYQI-MQNLGLKPD---MTSYNILLKACCV-AGRVDLAQDMYKELKHLESVGRLK 347
+ + MQN + P +T YN ++ G + A D+++ +K R K
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR----DRCK 283
Query: 348 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 407
TY+ +I ++ A M+ K+ +MRS N +++L+NA A GL E+A ++
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 408 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS 467
FE++ G EP+ +N ++ + Y RA GY
Sbjct: 344 FEQLQEDGLEPDVYVYNALMES------YSRA------------------GY-------- 371
Query: 468 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH--AKALINEMKTVGL 525
P G ++I S + P ++YN ++ A G H A+A+ EMK +G+
Sbjct: 372 -------PYG--AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI 422
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
+P + +L+ +V I+K M + G++PD + + + F +
Sbjct: 423 APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 482
Query: 586 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ EM++ + TYN L+ K G + +++ ++ ++++ ++P+
Sbjct: 483 ILAEMENGPCTADISTYNILINIYGKAGFLERIEE---LFVELKEKNFRPD 530
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 190/442 (42%), Gaps = 22/442 (4%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
+R +S P I F +I +G++ A Y L + P Y +I A + G
Sbjct: 168 LRKSSFQPDV-ICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 258 DFMKSRYIYEDLLNQKITP---NIYVFNSLMN---VNSRDLTYTLNIYQIMQNLGLKPDM 311
++ + ++ N ++P + V+N+ + + ++++Q M+ KP
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 312 TSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALK 371
+YN+++ A + ++ +Y E++ + K ++ TY+ ++ FA L + A +
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQC----KPNICTYTALVNAFAREGLCEKAEE 342
Query: 372 VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 431
+ ++ G+ + +++L+ + + AG A ++F M GCEP+ +NI++ A
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 432 EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 491
A + A F K LG + L + A V I+
Sbjct: 403 RAGLHSDAEAVFEEMK---RLGIAPTMKSHMLLLSAYSKARDVTKC---EAIVKEMSENG 456
Query: 492 FTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
P T N++L G + + ++ EM+ + + T++ILI+I G +E
Sbjct: 457 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 516
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
E+ + + +PDV+ +T+ I K + + L ++EEM P+ T LL A
Sbjct: 517 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 576
Query: 610 SKYGSVLEVQQCLAIYQDMQKA 631
S S +V+Q ++ + M K
Sbjct: 577 S---SEEQVEQVTSVLRTMHKG 595
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 176/411 (42%), Gaps = 56/411 (13%)
Query: 234 LKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNS-RDL 292
L+K P++ + +IDA G + ++ +Y LL + P + L+ L
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 293 TYTLNIYQI-MQNLGLKPD---MTSYNILLKACCV-AGRVDLAQDMYKELKHLESVGRLK 347
+ + MQN + P +T YN ++ G + A D+++ +K R K
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR----DRCK 261
Query: 348 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 407
TY+ +I ++ A M+ K+ +MRS N +++L+NA A GL E+A ++
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 408 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS 467
FE++ G EP+ +N ++ + Y RA GY
Sbjct: 322 FEQLQEDGLEPDVYVYNALMES------YSRA------------------GY-------- 349
Query: 468 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH--AKALINEMKTVGL 525
P G ++I S + P ++YN ++ A G H A+A+ EMK +G+
Sbjct: 350 -------PYG--AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI 400
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
+P + +L+ +V I+K M + G++PD + + + F +
Sbjct: 401 APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 460
Query: 586 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ EM++ + TYN L+ K G + +++ ++ ++++ ++P+
Sbjct: 461 ILAEMENGPCTADISTYNILINIYGKAGFLERIEE---LFVELKEKNFRPD 508
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 190/442 (42%), Gaps = 22/442 (4%)
Query: 198 VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG 257
+R +S P I F +I +G++ A Y L + P Y +I A + G
Sbjct: 146 LRKSSFQPDV-ICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 258 DFMKSRYIYEDLLNQKITP---NIYVFNSLMN---VNSRDLTYTLNIYQIMQNLGLKPDM 311
++ + ++ N ++P + V+N+ + + ++++Q M+ KP
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 312 TSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALK 371
+YN+++ A + ++ +Y E++ + K ++ TY+ ++ FA L + A +
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQC----KPNICTYTALVNAFAREGLCEKAEE 320
Query: 372 VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 431
+ ++ G+ + +++L+ + + AG A ++F M GCEP+ +NI++ A
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 432 EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 491
A + A F K LG + L + A V I+
Sbjct: 381 RAGLHSDAEAVFEEMK---RLGIAPTMKSHMLLLSAYSKARDVTKC---EAIVKEMSENG 434
Query: 492 FTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
P T N++L G + + ++ EM+ + + T++ILI+I G +E
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
E+ + + +PDV+ +T+ I K + + L ++EEM P+ T LL A
Sbjct: 495 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 554
Query: 610 SKYGSVLEVQQCLAIYQDMQKA 631
S S +V+Q ++ + M K
Sbjct: 555 S---SEEQVEQVTSVLRTMHKG 573
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 175/409 (42%), Gaps = 71/409 (17%)
Query: 230 AYDALKKHLD---GPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSL 284
A++ ++ LD P++ Y ++ CG C G+ + +D+L++ N + S+
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILL--CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 285 MN---VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
M + + L+++ M+ GL PD+ +Y+I++ C G+ D+A +Y E+
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM---- 424
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
R+ + T+ ++ + A + + S+G L+ V ++ +I+ A +G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 461
E+A++LF+ ++ G P+ FN +++ GY
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIY-----------------------------GY-- 513
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA---CGSDYYHAKALIN 518
K +I A +IL + + P+ +Y TL+ A CG + L
Sbjct: 514 -CKTQNIAEA---------RKILDVIKLYGLAPSVVSYTTLMDAYANCG-NTKSIDELRR 562
Query: 519 EMKTVGLSPNQITWSILID-ICGGTEN-----------VEGAIEILKSMGDAGIKPDVIA 566
EMK G+ P +T+S++ +C G ++ E + L+ M GI PD I
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
Y T I+ K+ A E MKS + + TYN L+ + YG +
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 185/423 (43%), Gaps = 57/423 (13%)
Query: 240 GPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN----VNSRDLTYT 295
GP++ + +I+ G ++ + +L + P++Y N L+N V S +
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGS--IAEA 276
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L + M G++PD +YNIL K + G + A ++ +++ L DV TY+
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD----KGLSPDVITYTI 332
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTV-AWSSLINACAHAGLVEQAIQLFEEMLLA 414
++ M L + DM S G LN++ S +++ G +++A+ LF +M
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 415 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 474
G P+ ++I++H + ++D A W ++M
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMAL-----WLYDEM----------------------- 424
Query: 475 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITW 532
+ +IL P + T+ LL C A++L++ + + G + + + +
Sbjct: 425 ----CDKRIL---------PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 533 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
+I+ID + +E A+E+ K + + GI P V + + I +++N +A + + +K
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 593 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVI 652
+ P+ V+Y TL+ A + G+ + + + ++M+ G P + + + C G
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 653 QDN 655
+N
Sbjct: 589 HEN 591
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 164/395 (41%), Gaps = 54/395 (13%)
Query: 209 ILFCNI-ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYI 265
I+ C++ +S K + AL ++ +K P++ Y +I GLC G F + ++
Sbjct: 363 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH--GLCKLGKFDMALWL 420
Query: 266 YEDLLNQKITPNIYVFNSL--------MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNIL 317
Y+++ +++I PN +L M + +R L +L + G D+ YNI+
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL------ISSGETLDIVLYNIV 474
Query: 318 LKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
+ +G ++ A +++K + +E+ + V T++++I + + A K+ ++
Sbjct: 475 IDGYAKSGCIEEALELFKVV--IET--GITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 378 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
G+ + V++++L++A A+ G + +L EM G P +++I
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG---- 586
Query: 438 RAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTS 497
WK E KQG L E P
Sbjct: 587 --------WKHENCNHVLRERIFEKCKQG-----------------LRDMESEGIPPDQI 621
Query: 498 TYNTLLK-ACGSDYYHAKALINE-MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
TYNT+++ C + + E MK+ L + T++ILID + A + S+
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681
Query: 556 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 590
+ + AYTT IK + + A+ L+ ++
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 114/296 (38%), Gaps = 68/296 (22%)
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
+ W L+ + +V+ ++ + ++M +TQ +N +L +H
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL---------------YHF 169
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ-------ILSFTERFPFTPTTST 498
+ +KM + E +K + H +TV +G Q L +E P+ +
Sbjct: 170 RETDKMWDVYKE-----IKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 499 YNTLLKA-------------------CG---SDYYH---------------AKALINEMK 521
+N+++ CG S Y H A L ++M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
G+ P+ +T++IL + GA E+++ M D G+ PDVI YT + + N
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 582 QALTLYEEMKSCEIHPNWVT-YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
L L ++M S N + + +L K G + + L+++ M+ G P+
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG---RIDEALSLFNQMKADGLSPD 397
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 221/533 (41%), Gaps = 59/533 (11%)
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
LP +F II FG+ R + + D + K P++ ++ +I+D +
Sbjct: 108 LPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIARE 167
Query: 264 YIYEDLLNQKITPNIYVFNSLMNVNSRDLTYT------LNIYQIMQNLGLKPDMTSYNIL 317
+ ++ I ++Y + LM + L+ T + QIM+ G+ P+ YN L
Sbjct: 168 FFTRKMMASGIHGDVYTYGILM----KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTL 223
Query: 318 LKACCVAGRVDLAQDMYKELKH-------------------------LESVGRLKL--DV 350
L A C G+V A+ + E+K LE L DV
Sbjct: 224 LHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDV 283
Query: 351 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 410
T + +++V + AL+V + S G ++ VA ++L+ G + A + F E
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIE 343
Query: 411 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 470
M G PN + +N+++ + D A F+ K + + +F +N+ ++ SI
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT-FNTLIRGLSIGG 402
Query: 471 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQI 530
T +G +++ ++ YN ++ + AL +K L P +
Sbjct: 403 RTD--DGLKILEMMQDSDTV-HGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAV 459
Query: 531 TWSI-LIDIC--GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 587
S LI +C GG ++++ A + + +G+ G+ P +I I + +++L L
Sbjct: 460 DRSFKLISLCEKGGMDDLKTAYD--QMIGEGGV-PSIIVSHCLIHRYSQHGKIEESLELI 516
Query: 588 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
+M + P T+N ++ K V+ + +DM + G P+ L+EE
Sbjct: 517 NDMVTRGYLPRSSTFNAVIIGFCKQDKVM---NGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 648 CEGVIQDNREYQAEFSS-IKKSELERP---QSLLL---EKIAAHLLKRVADIL 693
C V D ++ FS ++KS + P SL+ +K A H+ + DI+
Sbjct: 574 C--VKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQDII 624
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 146/305 (47%), Gaps = 14/305 (4%)
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
+V Y+ +KVF +K + + K+ +M G+ + ++++I+ G+ ++A++ F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
E+M GCEP+ ++ A A D A + + K +++ ++ I
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRID-AVTFSTLIR---I 289
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLS 526
+ + +G N I + P YN L+ + G + AK + ++ T G +
Sbjct: 290 YGVSGNYDGCLN--IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFT 347
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
PN T++ L+ G + A+ I + M + G+ VI Y T + +C +++ +A +
Sbjct: 348 PNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEI 407
Query: 587 YEEMKSCEI-HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
+++MK+CE P+ T+++L+ + G V E + L M++AG++P + L +I+
Sbjct: 408 FQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL---QMREAGFEPTLFVLTSVIQ 464
Query: 646 EWCEG 650
C G
Sbjct: 465 --CYG 467
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 198/487 (40%), Gaps = 83/487 (17%)
Query: 150 RRMVMSGHIA--EAVELMEV--LARFQLPIRELVQPSDMI------KRCVLSRNPKLAVR 199
R ++ + H++ EA+ E L LPI E + R R R
Sbjct: 49 RNLLQATHVSVQEAIPQSEKSKLVDVDLPIPEPTASKSYVWVNPKSPRASQLRRKSYDSR 108
Query: 200 YASLLPHAHIL---------FCNIISEFGKRRDLISALEAYDALKKHLDGP--------- 241
Y+SL+ A L C++I+ FG + A+ + + P
Sbjct: 109 YSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLET 168
Query: 242 -----NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTY 294
+ +Y + D KS +++++L + I P+ F ++++ ++
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 295 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 354
+ ++ M + G +PD + ++ A AG VD+A +Y + + ++D T+S
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRAR----TEKWRIDAVTFS 284
Query: 355 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 414
T+I+++ + + L + +M++ GV N V ++ LI++ A QA ++++++
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344
Query: 415 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 474
G PN + ++ A Y RA R+ G+ L + E +K+
Sbjct: 345 GFTPNWSTYAALVRA------YGRA-RY-----GDDALAIYRE-----MKE--------- 378
Query: 475 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTV-GLSPNQIT 531
G S + IL YNTLL C + Y A + +MK P+ T
Sbjct: 379 -KGLSLTVIL--------------YNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWT 423
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+S LI + + V A L M +AG +P + T+ I+ ++K + ++++
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 592 SCEIHPN 598
I P+
Sbjct: 484 ELGITPD 490
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ F +I +G + L Y+ +K PN+ IY +ID+ G +++ IY+D
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 269 LLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
L+ TPN + +L+ +R L IY+ M+ GL + YN LL C
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
VD A ++++++K+ E+ D +T+S++I V+A + A MR AG
Sbjct: 401 VDEAFEIFQDMKNCETCDP---DSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLF 457
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
+S+I A V+ ++ F+++L G P+ + +L+
Sbjct: 458 VLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLN 499
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 183/443 (41%), Gaps = 75/443 (16%)
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSY 314
G ++ I+ L+ + P++ + +L+ +R + L++ ++ GLKPD +
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392
Query: 315 NILLKACCVAGRVDLAQDMYKELKH----------------------LESVGRLKLDVF- 351
N ++ A +G +D A +++++K LE RL LD+
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRL-LDMML 451
Query: 352 ----------TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
T + +++ + + + + A + + M+S GV + V +++L A A G
Sbjct: 452 RDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGST 511
Query: 402 EQAIQL-FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 460
A + ML +PN + I++ E + + A RFF+
Sbjct: 512 CTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY---------------- 555
Query: 461 SNLKQGSIHNATTVPN----GFSN-------SQILSFTERFPFTPTTSTYNTLLKACGS- 508
+K+ +H V N GF N +++ E F P T++TL+ A S
Sbjct: 556 -RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 509 -DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
D + + +M G+ P+ +SIL E A +IL M G++P+V+ Y
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIY 674
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEI---HPNWVTYNTLLKARSKYGSVLEVQQCLAI 624
T I + K+A+ +Y++M C I PN TY TL+ +G + + +
Sbjct: 675 TQIISGWCSAGEMKKAMQVYKKM--CGIVGLSPNLTTYETLIWG---FGEAKQPWKAEEL 729
Query: 625 YQDMQKAGYKPNDYYLEELIEEW 647
+DM+ P ++ + + W
Sbjct: 730 LKDMEGKNVVPTRKTMQLIADGW 752
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 148/340 (43%), Gaps = 46/340 (13%)
Query: 347 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 406
K + TY+T++ K + L + + G+ +T+ ++++INA + +G ++QA++
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 407 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 466
+FE+M +GC+P FN ++ + + + + R ++ML N+
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQP--NDRTCNILVQ 468
Query: 467 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA--------------------- 505
+ N + ++ I+ + + P T+NTL KA
Sbjct: 469 AWCNQRKIEEAWN---IVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 506 --------CGS--DYYHAKALINE-------MKTVGLSPNQITWSILIDICGGTENVEGA 548
CG+ + Y + + E MK +G+ PN ++ LI +++G
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 549 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
E++ M + G+KPDV+ ++T + + K+ +Y +M I P+ ++ L K
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 609 RSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
++ G + +Q I M+K G +PN ++I WC
Sbjct: 646 YARAGEPEKAEQ---ILNQMRKFGVRPNVVIYTQIISGWC 682
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 158/371 (42%), Gaps = 37/371 (9%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
ILF II+ + +L A++ ++ +K+ P + +I G G +S + +
Sbjct: 390 ILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDM 449
Query: 269 LL-NQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
+L ++ + PN N L+ N R + NI MQ+ G+KPD+ ++N L KA G
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
Query: 326 RVDLAQDM-YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
A+DM + H ++K +V T TI+ + + + AL+ + M+ GV+ N
Sbjct: 510 STCTAEDMIIPRMLH----NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
++SLI + ++ ++ + M G +P+ F+ +++A
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA--------------- 610
Query: 445 SWKGNKMLGSFGEGYNSNLKQG---SIHNATTVPNGFSNS-------QILSFTERFPFTP 494
W + E Y L+ G IH + + G++ + QIL+ +F P
Sbjct: 611 -WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRP 669
Query: 495 TTSTYNTLLKACGSDYYHAKALINEMKT---VGLSPNQITWSILIDICGGTENVEGAIEI 551
Y ++ S KA+ K VGLSPN T+ LI G + A E+
Sbjct: 670 NVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEEL 729
Query: 552 LKSMGDAGIKP 562
LK M + P
Sbjct: 730 LKDMEGKNVVP 740
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 512 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
A ++ N + G P+ IT++ L+ ++ + ++ + G+KPD I + I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
ES N QA+ ++E+MK P T+NTL+K K G + E + L + ++
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM--LRDE 454
Query: 632 GYKPNDYYLEELIEEWC 648
+PND L++ WC
Sbjct: 455 MLQPNDRTCNILVQAWC 471
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 152/329 (46%), Gaps = 16/329 (4%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
FC ++ ++ + + + A+ A++ ++K+ PN+ + ++ A + K++ ++E++
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 271 NQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
+ + TP+ ++ L+ ++ L +++ M + G PD+ +Y+I++ C AGRVD
Sbjct: 231 D-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
A + + + K F YS ++ + + A+ +M +G+ + +
Sbjct: 290 EALGIVRSM----DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
+SLI A A ++ ++ +EM G PN++ NIIL +E + D AF F K
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR--KM 403
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 508
K+ + Y +K + ++ + + P+ T++ L+
Sbjct: 404 IKVCEPDADTYTMVIKMFCEKKEMETAD-----KVWKYMRKKGVFPSMHTFSVLINGLCE 458
Query: 509 DYYHAKA--LINEMKTVGLSPNQITWSIL 535
+ KA L+ EM +G+ P+ +T+ L
Sbjct: 459 ERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 157/344 (45%), Gaps = 17/344 (4%)
Query: 268 DLLN---QKITPNIYVFNSLMNVNSRDLTYTLNIY--QIMQNLGLKPDMTSYNILLKACC 322
DL+N +K N+ F +M +R IY +M+ L P++ ++N LL A C
Sbjct: 155 DLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALC 214
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
+ V AQ++++ ++ R D TYS +++ + A +V +M AG +
Sbjct: 215 KSKNVRKAQEVFENMR-----DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 269
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ V +S +++ AG V++A+ + M + C+P T +++++H + + A
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
F + + M +NS + G+ A + N + ++L + TP + + N +
Sbjct: 330 FLEMERSGMKADVA-VFNSLI--GAFCKANRMKNVY---RVLKEMKSKGVTPNSKSCNII 383
Query: 503 LKACGSDYYHAKALINEMKTVGL-SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
L+ +A K + + P+ T++++I + + +E A ++ K M G+
Sbjct: 384 LRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 605
P + ++ I E + ++A L EEM I P+ VT+ L
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 488 ERFPFTPTTSTYNTLLKA-CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 546
E++ P +N LL A C S + E +P+ T+SIL++ G N+
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLP 254
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
A E+ + M DAG PD++ Y+ + + ++ +AL + M P Y+ L+
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIK 666
YG+ +++ + + +M+++G K + LI +C+ NR + + +K
Sbjct: 315 HT---YGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKA----NR-MKNVYRVLK 366
Query: 667 --KSELERPQSLLLEKIAAHLLKRVADILAIDV 697
KS+ P S I HL++R A DV
Sbjct: 367 EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVP 475
N + F I++ A + D A F+ + + L +F ++ K ++ A V
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV- 225
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWS 533
F N R FTP + TY+ LL+ G + A+ + EM G P+ +T+S
Sbjct: 226 --FENM-------RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYS 276
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
I++DI V+ A+ I++SM + KP Y+ + ++A+ + EM+
Sbjct: 277 IMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERS 336
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ + +N+L+ A K + V + L ++M+ G PN
Sbjct: 337 GMKADVAVFNSLIGAFCKANRMKNVYRVL---KEMKSKGVTPN 376
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 196/448 (43%), Gaps = 70/448 (15%)
Query: 201 ASLLPH--AHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC-- 256
+S+ P+ H + + +S+ G+ D L+ ++ +K++ ++Y Y ++I GLC
Sbjct: 249 SSVYPNVKTHNIMISGLSKCGRVDD---CLKIWERMKQNEREKDLYTYSSLIH--GLCDA 303
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSY 314
G+ K+ ++ +L +K + ++ +N+++ R + +L +++IM++ ++ SY
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSY 362
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
NIL+K G++D A +++ L D TY I AL V
Sbjct: 363 NILIKGLLENGKIDEATMIWR----LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
++ S+G +L+ A++S+I+ +E+A L +EM G E N+ H C
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS-------HVC---- 467
Query: 435 QYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 494
N ++G G +S L + S NG P
Sbjct: 468 --------------NALIG--GLIRDSRLGEASFFLREMGKNGCR--------------P 497
Query: 495 TTSTYNTLLKACG----SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTEN--VEGA 548
T +YN L+ CG + A A + EM G P+ T+SIL+ CG + ++ A
Sbjct: 498 TVVSYNILI--CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL--CGLCRDRKIDLA 553
Query: 549 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
+E+ +G++ DV+ + I A+T+ M+ N VTYNTL++
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 609 RSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
K G + + I+ M K G +P+
Sbjct: 614 FFKVG---DSNRATVIWGYMYKMGLQPD 638
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 48/309 (15%)
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
Y I++ ++ ++ ++ +RS + S+I + +QA+ +F+ M
Sbjct: 46 YHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMR 105
Query: 413 -LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 471
+ GCEP + +N +L+A VEA Q+ + F
Sbjct: 106 EIFGCEPAIRSYNTLLNAFVEAKQWVKVESLF---------------------------- 137
Query: 472 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK-ACGS-DYYHAKALINEMKTVGLSPNQ 529
++ E P TYN L+K +C ++ A+ ++ M G P+
Sbjct: 138 -------------AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
++S +I+ ++ A+E+ M + G+ PDV Y I ++ K+ K A+ L++
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 590 -MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
++ ++PN T+N ++ SK G V CL I++ M++ + + Y LI C
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCG---RVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 649 EGVIQDNRE 657
+ D E
Sbjct: 302 DAGNVDKAE 310
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 170/401 (42%), Gaps = 41/401 (10%)
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD- 332
P I +N+L+N V ++ +++ + G+ P++ +YN+L+K C + A+
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 333 ---MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
M+KE K DVF+YST+I A A AL++ +M GV + ++
Sbjct: 172 LDWMWKE--------GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN 223
Query: 390 SLINACAHAGLVEQAIQLFEEMLL-AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
LI+ + A++L++ +L + PN + NI++ + + D + + K
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 449 N---KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
N K L ++ + G++ A +V N + + TYNT+L
Sbjct: 284 NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA---------SIDVVTYNTMLGG 334
Query: 506 ---CGSDYYHAKAL-INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
CG + I E K S N ++++ILI ++ A I + M G
Sbjct: 335 FCRCGKIKESLELWRIMEHKN---SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYA 391
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
D Y I + +AL + +E++S H + Y +++ K + E
Sbjct: 392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN- 450
Query: 622 LAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEF 662
+ ++M K G + N + LI G+I+D+R +A F
Sbjct: 451 --LVKEMSKHGVELNSHVCNALI----GGLIRDSRLGEASF 485
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 158/403 (39%), Gaps = 21/403 (5%)
Query: 240 GPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLN 297
PN+ Y +I +F K+R + + + P+++ +++++N + L L
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++ M G+ PD+T YNIL+ A +++ L SV +V T++ +I
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV---YPNVKTHNIMI 262
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ LK+ M+ + +SSLI+ AG V++A +F E+
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFH--SWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
+ +N +L + + + K + + S+ L+ G I AT
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEAT--- 379
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWS 533
I + +TY + + Y KAL + E+++ G + ++
Sbjct: 380 ------MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
+ID + +E A ++K M G++ + I + +A EM
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
P V+YN L+ K G E A ++M + G+KP+
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEAS---AFVKEMLENGWKPD 533
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 140/342 (40%), Gaps = 47/342 (13%)
Query: 296 LNIYQIMQNL-GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 354
L++++ M+ + G +P + SYN LL A A + + ++ + E+ G + ++ TY+
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFA---YFETAG-VAPNLQTYN 153
Query: 355 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 414
+IK+ K ++ A M G + ++S++IN A AG ++ A++LF+EM
Sbjct: 154 VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 415 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 474
G P+ C+NI++ ++ + A +
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELW------------------------------- 242
Query: 475 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSI 534
++L + +P T + + L CG + MK + T+S
Sbjct: 243 ------DRLLEDSSVYPNVKTHNIMISGLSKCGR-VDDCLKIWERMKQNEREKDLYTYSS 295
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
LI NV+ A + + + DV+ Y T + K++L L+ M+ +
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEH-K 354
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
N V+YN L+K + G + E I++ M GY +
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATM---IWRLMPAKGYAAD 393
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 170/395 (43%), Gaps = 20/395 (5%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNI 298
PN+ Y ID G+ + + + ++PN+ F L++ + DL +++
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
Y+ M+ + + ++ +Y L+ C G + A++MY + R++ + Y+TII
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE----DRVEPNSLVYTTIID 276
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
F A+K M + G+ L+ A+ +I+ G +++A ++ E+M + P
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ F +++A ++ + A +H G+ ++ S NG
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKL--------IERGFEPDVVALSTMIDGIAKNGQ 388
Query: 479 SNSQILSFT-ERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 537
+ I+ F E+ T + L K D+ + L +++ GL P++ ++ I
Sbjct: 389 LHEAIVYFCIEKANDVMYTVLIDALCKE--GDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
N+ A ++ M G+ D++AYTT I +A +++EM + I P
Sbjct: 447 GLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISP 506
Query: 598 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
+ ++ L++A K G++ L DMQ+ G
Sbjct: 507 DSAVFDLLIRAYEKEGNMAAASDLLL---DMQRRG 538
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/442 (19%), Positives = 185/442 (41%), Gaps = 62/442 (14%)
Query: 227 ALEAYDALKKHLDGP-----NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVF 281
AL+ L+K + P N +I++ I CG+ S L+++ TP+ F
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGIL-----SLKFLAYLVSRGYTPHRSSF 59
Query: 282 NSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH 339
NS+++ + + + +I M G +PD+ SYN L+ C G + A + + L+
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR- 118
Query: 340 LESVGRL-KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
S G + K D+ +++++ F+ K+ V + + N V +S+ I+ +
Sbjct: 119 -ASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 399 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 458
G ++ A++ F M PN F ++ +A + A + + +M
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM------- 229
Query: 459 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALIN 518
++ T + +GF + A+ + +
Sbjct: 230 ------SLNVVTYTALIDGFCKK--------------------------GEMQRAEEMYS 257
Query: 519 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
M + PN + ++ +ID + + A++ L M + G++ D+ AY I +
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
K+A + E+M+ ++ P+ V + T++ A K G ++ + +Y + + G++P+
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG---RMKAAVNMYHKLIERGFEPDVV 374
Query: 639 YLEELIEEWCEGVIQDNREYQA 660
L +I +G+ ++ + ++A
Sbjct: 375 ALSTMI----DGIAKNGQLHEA 392
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 148/345 (42%), Gaps = 65/345 (18%)
Query: 119 VIDTLKKVQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARFQLPIREL 178
+ID K LE+++S + E RR+ MS ++ L++ + E+
Sbjct: 204 LIDGYCKAGDLEVAVSLY----------KEMRRVRMSLNVVTYTALIDGFCK----KGEM 249
Query: 179 VQPSDMIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHL 238
+ +M R V R + P++ +++ II F +R D +A++ +
Sbjct: 250 QRAEEMYSRMVEDR----------VEPNS-LVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 239 DGPNMYIYRAIIDACGLCGD--FMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTY 294
++ Y II GLCG+ ++ I ED+ + P++ +F ++MN S +
Sbjct: 299 MRLDITAYGVIIS--GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 295 TLNIYQIMQNLGLKPDMTS------------------------------YNILLKACCVA 324
+N+Y + G +PD+ + Y +L+ A C
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKE 416
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G + ++ ++ S L D F Y++ I A K+K M G+ L+
Sbjct: 417 GDFIEVERLFSKI----SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
+A+++LI A GL+ +A Q+F+EML +G P++ F++++ A
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 178/467 (38%), Gaps = 92/467 (19%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLD------GPNMYIYRAIIDACGLCGDFMKSR 263
+FC +I FGK + L A+ D LK+ GPN++IY +++ G F ++
Sbjct: 148 VFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLL---GAMRGFGEAE 204
Query: 264 YIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
I +D+ + I PNI +N+LM + + L I + + G +P+ +Y+ A
Sbjct: 205 KILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYST---AL 261
Query: 322 CVAGRV------------------------DLAQDMYKELKHLES-VGRLKLDVFTYSTI 356
V R+ D+ D E LE+ +GR+ Y +
Sbjct: 262 LVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRI-----CYQVM 316
Query: 357 IKVFADAKLWQM-ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+ W LK+ + M SAGV + LI AC EE + G
Sbjct: 317 RRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTR-----------EEHYIVG 365
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
E + + C + + K K + E Y L +G P
Sbjct: 366 KELYKRIRERFSEISLSVCNH----LIWLMGKAKKWWAAL-EIYEDLLDEGP------EP 414
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWS 533
N S ++S +N LL A + L+N+M+ GL P + W+
Sbjct: 415 NNLSYELVVSH------------FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWN 462
Query: 534 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
++ C AI+I K+M D G KP VI+Y + + K + +A ++ M
Sbjct: 463 AVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKV 522
Query: 594 EIHPNWVTYNTLLKARSKYGSVLEVQQCL----AIYQDMQKAGYKPN 636
I PN Y T+ SVL QQ + ++M G +P+
Sbjct: 523 GIEPNLYAYTTM-------ASVLTGQQKFNLLDTLLKEMASKGIEPS 562
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 146/338 (43%), Gaps = 25/338 (7%)
Query: 293 TYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFT 352
T L + M + G++P + L+ AC + +++YK ++ E + L V
Sbjct: 328 TRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIR--ERFSEISLSVCN 385
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW-------SSLINACAHAGLVEQAI 405
+ +I + AK W AL++ D+ G N +++ + L++A + G+ +
Sbjct: 386 H--LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGV 443
Query: 406 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN---KMLGSFGEGYNSN 462
+L +M G +P + +N +L AC +A + A + F + N + S+G S
Sbjct: 444 RLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYG-ALLSA 502
Query: 463 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHA-KALINEM 520
L++G +++ ++ + + P Y T+ G ++ L+ EM
Sbjct: 503 LEKGKLYDEAF--------RVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEM 554
Query: 521 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 580
+ G+ P+ +T++ +I C A E M ++P+ I Y I+
Sbjct: 555 ASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKP 614
Query: 581 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 618
+ A L+ + ++ + + Y+ ++K+ YG+ +++
Sbjct: 615 RLAYELHVKAQNEGLKLSSKPYDAVVKSAETYGATIDL 652
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 13/232 (5%)
Query: 225 ISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPN------- 277
I E Y +++ ++ + +I G + + IYEDLL++ PN
Sbjct: 363 IVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELV 422
Query: 278 IYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK 335
+ FN L++ S+ + + + M++ GLKP +N +L AC A A ++K
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 336 ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINAC 395
+ K V +Y ++ KL+ A +V + M G+ N A++++ +
Sbjct: 483 AMVD----NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVL 538
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 447
L +EM G EP+ FN ++ C A+ +FH K
Sbjct: 539 TGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMK 590
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 15/271 (5%)
Query: 212 CN-IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE--- 267
CN +I GK + +ALE Y+ L PN Y ++ + R I+
Sbjct: 384 CNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGV 443
Query: 268 DLLNQ----KITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
LLN+ + P +N+++ S+ + T + I++ M + G KP + SY LL A
Sbjct: 444 RLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSAL 503
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
+ L + ++ H+ VG ++ +++ Y+T+ V + + + + +M S G+
Sbjct: 504 ---EKGKLYDEAFRVWNHMIKVG-IEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
+ V ++++I+ CA GL A + F M EPN + +++ A + A+
Sbjct: 560 EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYE 619
Query: 442 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 472
H N+ L + Y++ +K + AT
Sbjct: 620 -LHVKAQNEGLKLSSKPYDAVVKSAETYGAT 649
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 42/308 (13%)
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
DV TY+T+IK + A V MR AG+ + ++SLI+ A ++ + +QLF
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
+EML +G P+ +N ++ + ++ AF+ H I
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE---------------------DI 145
Query: 469 HNATTVP--------------NGFSNSQILSFTE-RFPFTPTTSTYNTLLKA-CGSDYYH 512
H A VP +G +++ I F + P TYN L+ C S
Sbjct: 146 HLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVG 205
Query: 513 A-KALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
+ ++ E+K G +PN +T++ ++ + T+ +E +++ M G D A +
Sbjct: 206 SVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVV 265
Query: 572 KVCVESKNFKQAL-TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
+++ ++A ++E ++S + V+YNTLL K G++ V L ++++
Sbjct: 266 SALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLL---EEIEM 322
Query: 631 AGYKPNDY 638
G KP+DY
Sbjct: 323 KGLKPDDY 330
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 164/374 (43%), Gaps = 59/374 (15%)
Query: 229 EAYDALKKHLDG---PNMYIYRAIIDACGLCGDFMKSRYI--YEDLLNQKITPNIYVFNS 283
EAY ++ + P++ Y ++I G + M +R + ++++L+ ++P+++ +N+
Sbjct: 66 EAYAVTRRMREAGIEPDVTTYNSLIS--GAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 284 LMNVNSRDLTYTLNIYQIMQN----LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH 339
LM+ + L ++I+ GL P + +YNILL A C +G D A +++K LK
Sbjct: 124 LMSCYFK-LGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK- 181
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
R+K ++ TY+ +I ++ + +++ +G N V +++++
Sbjct: 182 ----SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTK 237
Query: 400 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY 459
+E+ +QLF +M G + ++ A ++ + + A+ H
Sbjct: 238 RIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL------------- 284
Query: 460 NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALI 517
V +G + I+S YNTLL D L+
Sbjct: 285 --------------VRSGTRSQDIVS-------------YNTLLNLYFKDGNLDAVDDLL 317
Query: 518 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 577
E++ GL P+ T +I+++ N GA + L +G+ G++P V+ I ++
Sbjct: 318 EEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKA 377
Query: 578 KNFKQALTLYEEMK 591
+ +A+ L+ M+
Sbjct: 378 GHVDRAMRLFASME 391
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 167/379 (44%), Gaps = 32/379 (8%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
I DL+ K FN+L++ R D++ ++ M + ++PD+ + IL+ C
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 323 VAGRVDLAQDMYKEL--KHLESVGRLKLDVFTYSTII----KVFADAKLWQMALKVKHDM 376
+ RVD A ++++++ K + +K D ++T+I KV + ++ +++K +
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
R N V ++ LI+ AG +E A ++ M +PN N I+
Sbjct: 401 RCVP---NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 437 DRAFRFFHSWKGNKMLGSFGEGYNSNL--KQGSIHNATTVPNGFSNSQILSFTERF---P 491
+ A FF + EG N+ IH +V N + + + E+
Sbjct: 458 NMAVVFFMDMEK--------EGVKGNVVTYMTLIHACCSVSNV---EKAMYWYEKMLEAG 506
Query: 492 FTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
+P Y L+ C H A ++ ++K G S + + +++LI + N E
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
E+L M G KPD I Y T I + K+F+ + E+M+ + P TY ++ A
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDA- 625
Query: 610 SKYGSVLEVQQCLAIYQDM 628
Y SV E+ + L +++DM
Sbjct: 626 --YCSVGELDEALKLFKDM 642
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 192/432 (44%), Gaps = 41/432 (9%)
Query: 59 WNISRTL---DSPLSPNHYARVASKLAQDIEMVLQEDPVDSGVNVELLAKLVVLGI---- 111
W+I L +PL + + S L +++++ D V V++ +V LGI
Sbjct: 279 WDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINT 338
Query: 112 --RGRNVWTVIDTLKKVQGLEISLSAHLNASAM---DVIAAECRRMVMSGHIAEAVELME 166
+ R V ++ ++++G + A ++ +I C+ G + EA EL+
Sbjct: 339 LCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK----VGRLKEAEELL- 393
Query: 167 VLARFQLPIRELVQPSDMIKRCVLS---RNPKLA--------VRYASLLPHAHILFCNII 215
++ + E P+ + C++ R KL ++ + P+ + I+
Sbjct: 394 ----VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV-VTVNTIV 448
Query: 216 SEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKIT 275
+ L A+ + ++K N+ Y +I AC + K+ Y YE +L +
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
P+ ++ +L++ R + + + ++ G D+ +YN+L+ C A+ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---AEKV 565
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
Y+ L +E G+ K D TY+T+I F K ++ ++ MR G++ + ++I+
Sbjct: 566 YEMLTDMEKEGK-KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Query: 394 ACAHAGLVEQAIQLFEEM-LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
A G +++A++LF++M L + PNT +NI+++A + + +A K KM+
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM-KMV 683
Query: 453 GSFGEGYNSNLK 464
E YN+ K
Sbjct: 684 RPNVETYNALFK 695
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 169/387 (43%), Gaps = 39/387 (10%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIY 299
N+ Y +++D L D + R++ ++ + + N+L+ + + L ++
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+ M+ G++P + +YN L+ A VD A+ +++ ++ GR+K D+ TY+T+IK
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES----GRIKPDIVTYNTMIKG 266
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
+ A Q A++ DM + G + + + ++I AC + L++EM G +
Sbjct: 267 YCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVP 326
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSW--KGNK----MLGSFGEGYNSNLKQGSIHNATT 473
F++++ + + + + F + KG+K + +GY K GS+ +A
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY---AKSGSVEDAIR 383
Query: 474 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-------DYYHAKALINEMKTVGL 525
+ + + F P TY+ ++ C + DY+H + GL
Sbjct: 384 LLHRMIDEG---------FKPDVVTYSVVVNGLCKNGRVEEALDYFHT------CRFDGL 428
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
+ N + +S LID G V+ A + + M + G D Y I + + +A+
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488
Query: 586 LYEEMKSCEIHPNWV-TYNTLLKARSK 611
L++ M+ E V TY LL K
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFK 515
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 134/335 (40%), Gaps = 52/335 (15%)
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
Y +++ V A AK V +++ + A ++LI + G+VE+ + ++ +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 413 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIH 469
G EP +N +++ V A D A R F + ++ + ++ K G
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 470 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGL-- 525
A + L E TY T+++AC SD+ AL EM G+
Sbjct: 275 KAM---------EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQV 325
Query: 526 ---------------------------------SPNQITWSILIDICGGTENVEGAIEIL 552
PN +++LID + +VE AI +L
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
M D G KPDV+ Y+ + ++ ++AL + + + N + Y++L+ K
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
G V E ++ ++++M + G + Y LI+ +
Sbjct: 446 GRVDEAER---LFEEMSEKGCTRDSYCYNALIDAF 477
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 12/226 (5%)
Query: 205 PHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
PHA F +I K L ++ + + PN+ IY +ID G +
Sbjct: 327 PHA---FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 265 IYEDLLNQKITPNIYVFNSLMN---VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+ ++++ P++ ++ ++N N R + L+ + + GL + Y+ L+
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGR-VEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM-RSAG 380
AGRVD A+ +++E+ S D + Y+ +I F + A+ + M G
Sbjct: 443 GKAGRVDEAERLFEEM----SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG 498
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
+ ++ L++ E+A++L++ M+ G P CF +
Sbjct: 499 CDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/414 (19%), Positives = 182/414 (43%), Gaps = 54/414 (13%)
Query: 226 SALEAYDALKKHL-DGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSL 284
SA++ ++ L++ L PN+ IY +I G C K+ ++++++N+ N V+ +L
Sbjct: 132 SAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTAL 191
Query: 285 MNVNSR----DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHL 340
++ SR D +TL + ++ + +PD+ +Y+IL+K+ D QD+ +++
Sbjct: 192 VSAYSRSGRFDAAFTL-LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR- 249
Query: 341 ESVGRLKLDVFTYSTIIKVFADAKLW-QMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
++ + TY+T+I + AK++ +M + + ++ +S + A G
Sbjct: 250 ---QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNG 306
Query: 400 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY 459
+E +E+ +G EPN + FNI+L + ++ Y +
Sbjct: 307 QIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKM-------------------- 346
Query: 460 NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALI 517
S ++ + +++ ++ T TYN ++ A G D + L
Sbjct: 347 ---------------------SAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 518 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 577
M++ + P+ +T L+ G + +L+ + ++ I+ D++ + +
Sbjct: 386 RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRM 445
Query: 578 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
+ F + + E M+ P+ +TY T++KA G V++ + + + +A
Sbjct: 446 EKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGEA 499
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 47/272 (17%)
Query: 366 WQMALKVKHDMRSA-GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 424
W+ A++V +R N + LI E+A +LF+EM+ GC N + +
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 425 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 484
++ A + ++D AF K S HN
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMK-------------------SSHNC------------- 217
Query: 485 SFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGT 542
P TY+ L+K+ + K L+++M+ G+ PN IT++ LID G
Sbjct: 218 --------QPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKA 269
Query: 543 EN-VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
+ VE +++ +G+ KPD + ++ + + YE+ +S I PN T
Sbjct: 270 KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 602 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 633
+N LL + YG ++ A+ + MQK Y
Sbjct: 330 FNILLDS---YGKSGNYKKMSAVMEYMQKYHY 358
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 11/239 (4%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLN 271
+I K R ++ ALE +K PN+ Y ++I GLC G + ++ +
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLI--TGLCKSGRLADAERRLHEMDS 111
Query: 272 QKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
+KI PN+ F++L++ ++ L+ ++Y++M + + P++ +Y+ L+ C+ RVD
Sbjct: 112 KKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDE 171
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A M L + S G +V TYST+ F + +K+ DM GV NTV+ +
Sbjct: 172 AIKM---LDLMISKG-CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF-RFFHSWK 447
+LI AG ++ A+ +F M G PN + +NI+L + ++A RF H K
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 50/331 (15%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M LG++PD+ + + L+ C++ + +D +E +G +K DV + +I
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSI---KDAVYVAGQMEKMG-IKRDVVVDTILIDTLC 59
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+L AL+V M+ G++ N V +SSLI +G + A + EM PN
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
F+ ++ A K+G + +V
Sbjct: 120 TFSALIDAYA--------------------------------KRGKLSKVDSV------- 140
Query: 482 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 539
+ P TY++L+ C + A +++ M + G +PN +T+S L +
Sbjct: 141 --YKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
+ V+ I++L M G+ + ++ T IK ++ AL ++ M S + PN
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 600 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
+YN +L G EV++ L+ ++ MQK
Sbjct: 259 RSYNIVLAGLFANG---EVEKALSRFEHMQK 286
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 155/371 (41%), Gaps = 42/371 (11%)
Query: 274 ITPNIYVFNSLMN----VNS-RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
I P+I +SL+N NS +D Y + M+ +G+K D+ IL+ C V
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVY---VAGQMEKMGIKRDVVVDTILIDTLCKNRLVV 65
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
A ++ K +K + +V TYS++I + A + H+M S +N N + +
Sbjct: 66 PALEVLKRMKDRG----ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
S+LI+A A G + + +++ M+ +PN ++ +++ + D A +
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM-- 179
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTPTTSTYNT 501
+G N + +T+ NGF S ++L + T + NT
Sbjct: 180 ------ISKGCTPN-----VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 228
Query: 502 LLKACGSDYYHAK------ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
L+K Y+ A + M + GL PN +++I++ VE A+ + M
Sbjct: 229 LIKG----YFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Query: 556 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
D+I YT I ++ K+A L+ ++K + P++ Y ++ ++ G
Sbjct: 285 QKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMR 344
Query: 616 LEVQQCLAIYQ 626
E YQ
Sbjct: 345 TEADALNRFYQ 355
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 519 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
+M+ +G+ + + +ILID V A+E+LK M D GI P+V+ Y++ I +S
Sbjct: 38 QMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSG 97
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
A EM S +I+PN +T++ L+ A +K G + +V ++Y+ M + PN +
Sbjct: 98 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD---SVYKMMIQMSIDPNVF 154
Query: 639 YLEELIEEWC 648
LI C
Sbjct: 155 TYSSLIYGLC 164
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 519 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
+M +G+ P+ +T S L++ + +++ A+ + M GIK DV+ T I +++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
AL + + MK I PN VTY++L+ K G + + ++ L +M PN
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL---HEMDSKKINPNVI 119
Query: 639 YLEELIEEWCE 649
LI+ + +
Sbjct: 120 TFSALIDAYAK 130
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 493 TPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
+P TY++L+ C S A+ ++EM + ++PN IT+S LID +
Sbjct: 80 SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDS 139
Query: 551 ILKSMGDAGIKPDVIAYTTAI-KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
+ K M I P+V Y++ I +C+ ++ +A+ + + M S PN VTY+TL
Sbjct: 140 VYKMMIQMSIDPNVFTYSSLIYGLCMHNR-VDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
K V + + DM + G N LI+ + +
Sbjct: 199 FKSS---RVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 150/319 (47%), Gaps = 34/319 (10%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
I+ + LGL+ +++ N L+ G+++L++ ++ +K ++ ++++I+
Sbjct: 111 IHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK--------DRNLSSWNSIL 162
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ A+ + +M G+ + V W+SL++ A GL + AI + + M +AG +
Sbjct: 163 SSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLK 222
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN-SNLKQGSIHNATTVPN 476
P+T + +L A E G+ LG GY N ++ TT+ +
Sbjct: 223 PSTSSISSLLQAVAEP--------------GHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 477 GFSNSQILSFTERFPF----TPTTSTYNTLLKACGSDYY----HAKALINEMKTVGLSPN 528
+ + L + R F +N+L+ G Y A+AL+ M+ G+ P+
Sbjct: 269 MYIKTGYLPYA-RMVFDMMDAKNIVAWNSLVS--GLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 529 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 588
ITW+ L E A++++ M + G+ P+V+++T C ++ NF+ AL ++
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 589 EMKSCEIHPNWVTYNTLLK 607
+M+ + PN T +TLLK
Sbjct: 386 KMQEEGVGPNAATMSTLLK 404
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 165/398 (41%), Gaps = 73/398 (18%)
Query: 274 ITPNIYVFNSLMN-VNSRDLTY-TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
+ P+I +NSL++ S+ L+ + + + MQ GLKP +S + LL+A G + L +
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
++ + +L DV+ +T+I ++ A ++ DM A N VAW+SL
Sbjct: 246 AIHGYILR----NQLWYDVYVETTLIDMYIKTGYLPYA-RMVFDMMDAK---NIVAWNSL 297
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
++ ++A L++ A L M G +P+ +N + + ++A K +
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 452 ---LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK--AC 506
+ S+ ++ K G+ NA V + E P +T +TLLK C
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKV--------FIKMQEE-GVGPNAATMSTLLKILGC 408
Query: 507 GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL-----KSMG----- 556
S + K + L + + L+D+ G + +++ AIEI KS+
Sbjct: 409 LSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCM 468
Query: 557 ---------------------DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
+AG++PD I +T+ + VC S ++ ++ M
Sbjct: 469 LMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM----- 523
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 633
RS+YG + ++ C + + ++GY
Sbjct: 524 -------------RSRYGIIPTIEHCSCMVDLLGRSGY 548
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/529 (20%), Positives = 216/529 (40%), Gaps = 82/529 (15%)
Query: 151 RMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHIL 210
R + +G + AV ++++AR + + V S ++K C+ +R+ +L L HA ++
Sbjct: 35 RHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGK-----LVHARLI 89
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
+I P+ +Y ++I GD K+ ++E +
Sbjct: 90 EFDI-------------------------EPDSVLYNSLISLYSKSGDSAKAEDVFE-TM 123
Query: 271 NQKITPNIYVFNSLMNV---NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRV 327
+ ++ ++++M N R+L + ++ LGL P+ Y +++AC + V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELD-AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 328 DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK-LWQMALKVKHDMRSAGVNLNTV 386
+ + L L G + DV ++I +F + ++ A KV M LN V
Sbjct: 183 GVGR---VTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS----ELNVV 235
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
W+ +I C G +AI+ F +M+L+G E + + + AC E + HSW
Sbjct: 236 TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG-KQLHSW 294
Query: 447 KGNKML-----GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT-------------- 487
L S + Y GS+ + V + + ++S+T
Sbjct: 295 AIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 488 ----------ERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSIL 535
+ P T+++ KACG SD K ++ + GL+ N + +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
I + ++ +E A +S+ + ++++Y T + + NF+QA L E+ E+
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSE----KNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
+ T+ +LL + GS+ + +Q I+ + K G N LI
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQ---IHSQVVKLGLSCNQPVCNALI 516
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 213 NIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQ 272
++IS F K + A A+++L + N+ Y +D +F ++ + ++ +
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSE----KNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 273 KITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
++ + + F SL++ N + I+ + LGL + N L+ G +D A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
++ +++ +V +++++I FA L+ + M GV N V + +
Sbjct: 529 SRVFNFMENR--------NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 391 LINACAHAGLVEQAIQLFEEM 411
+++AC+H GLV + + F M
Sbjct: 581 ILSACSHVGLVSEGWRHFNSM 601
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 151/360 (41%), Gaps = 52/360 (14%)
Query: 292 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 351
L + I ++M G PD +YN+++ C G + A + +++ S+ DV
Sbjct: 155 LDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM----SLSGSPPDVI 210
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN-ACAHAGLVEQAIQLFEE 410
TY+T+I+ D + A++ D G + ++ L+ C + G +AI++ E+
Sbjct: 211 TYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG-SARAIEVLED 269
Query: 411 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 470
M + GC P+ +N ++ N N ++G++
Sbjct: 270 MAVEGCYPDIVTYNSLV--------------------------------NYNCRRGNLEE 297
Query: 471 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPN 528
+V ILS T TYNTLL + C +Y+ + ++N M P
Sbjct: 298 VASVI-----QHILSHGLEL----NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 529 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 588
IT++ILI+ + AI+ M + PD++ Y T + + A+ L
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 589 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
+K+ P +TYN+++ +K G +++ L +Y M AG P+D LI +C
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGL---MKKALELYHQMLDAGIFPDDITRRSLIYGFC 465
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 180/434 (41%), Gaps = 34/434 (7%)
Query: 155 SGHIAEAVELMEVLARF-QLP--------IRELVQPSDMIKRCVLSRNPKLAVRYASLLP 205
+G + +A +L+EV+AR Q+P +R L + + K + R + + +P
Sbjct: 117 NGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILR----VMVMSGGVP 172
Query: 206 HAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYI 265
I + II K+ + +AL + + P++ Y +I G+ ++
Sbjct: 173 DT-ITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 266 YEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
++D L P + + L+ + R + + + M G PD+ +YN L+ C
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
G + +++ ++H+ S G L+L+ TY+T++ + W ++ + M
Sbjct: 292 RGNL---EEVASVIQHILSHG-LELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+ ++ LIN A L+ +AI F +ML C P+ +N +L A + D A
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 444 HSWKGN---KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
K L ++ + K+G + A + + ++ I P T
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF---------PDDITRR 458
Query: 501 TLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 558
+L+ C ++ A ++ E G T+ ++I + +E AIE+++ M
Sbjct: 459 SLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG 518
Query: 559 GIKPDVIAYTTAIK 572
G KPD YT +K
Sbjct: 519 GCKPDETIYTAIVK 532
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 494 PTTSTYNTLLKACGSDYYHAKALINEMKTV---GLSPNQITWSILIDI----CGGTENVE 546
P TYNT+++ C DY +A+ I K G P IT+++L+++ CG
Sbjct: 207 PDVITYNTVIR-CMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR--- 262
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
AIE+L+ M G PD++ Y + + N ++ ++ + + S + N VTYNTLL
Sbjct: 263 -AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
+ + EV++ L I M + Y P LI C+
Sbjct: 322 HSLCSHEYWDEVEEILNI---MYQTSYCPTVITYNILINGLCK 361
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYI--YEDLLNQKITPNIYVFNSLMNVNSRD--LTYTL 296
P + Y +I+ GLC + SR I + +L QK P+I +N+++ S++ + +
Sbjct: 347 PTVITYNILIN--GLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
+ +++N P + +YN ++ G + A ++Y ++ G D+ T ++
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQML---DAGIFPDDI-TRRSL 460
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
I F A L + A +V + + G + + +I +E AI++ E ML GC
Sbjct: 461 IYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGC 520
Query: 417 EPNTQCFNIILHACVE 432
+P+ + I+ E
Sbjct: 521 KPDETIYTAIVKGVEE 536
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 143/327 (43%), Gaps = 47/327 (14%)
Query: 313 SYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 372
+YN ++ DL ++ E+ E + LD T S +++ A + + A+
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLD--TMSKVMRRLAKSGKYNKAVDA 225
Query: 373 KHDM-RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 431
+M +S GV +T+A +SL++A +E A ++F + L +P+ + FNI++H
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK-LFDTIKPDARTFNILIHGFC 284
Query: 432 EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 491
+A ++D A ++ TE
Sbjct: 285 KARKFDDARAMM--------------------------------------DLMKVTE--- 303
Query: 492 FTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
FTP TY + ++A C D+ ++ EM+ G +PN +T++I++ G ++ V A+
Sbjct: 304 FTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEAL 363
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
+ + M + G PD Y++ I + ++ FK A ++E+M + + + + YNT++ A
Sbjct: 364 GVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAA 423
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ + L +D + PN
Sbjct: 424 LHHSRDEMALRLLKRMEDEEGESCSPN 450
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+KPD ++NIL+ C A + D A+ M +K V DV TY++ ++ + +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMK----VTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
+ ++ +MR G N N V ++ ++++ + V +A+ ++E+M GC P+ + ++ +
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 427 LHACVEACQYDRAFRFF 443
+H + ++ A F
Sbjct: 385 IHILSKTGRFKDAAEIF 401
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 129/323 (39%), Gaps = 50/323 (15%)
Query: 141 AMDVIAAECRRMVMSGHIAEAVE-LMEVLARFQLPIRELVQPSDM---IKRCVLSRNPKL 196
+D ++ RR+ SG +AV+ +E+ + + + S M +K + ++
Sbjct: 202 TLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEV 261
Query: 197 AVR-YASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGL 255
++ + ++ P A F +I F K R A D +K P++ Y + ++A
Sbjct: 262 FLKLFDTIKPDART-FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK 320
Query: 256 CGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTS 313
GDF + + E++ PN+ + +M+ S+ + L +Y+ M+ G PD
Sbjct: 321 EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 314 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVK 373
Y+ L+ GR A ++++++ + + V R DV Y+T+I +MAL++
Sbjct: 381 YSSLIHILSKTGRFKDAAEIFEDMTN-QGVRR---DVLVYNTMISAALHHSRDEMALRLL 436
Query: 374 --------------------------------------HDMRSAGVNLNTVAWSSLINAC 395
H M V+++ + LI
Sbjct: 437 KRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGL 496
Query: 396 AHAGLVEQAIQLFEEMLLAGCEP 418
+G VE+A FEE + G P
Sbjct: 497 CMSGKVEEACLFFEEAVRKGMVP 519
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 164/414 (39%), Gaps = 61/414 (14%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYE--DLLNQKITPNIYVFNSLMNVNSR-----DLTYTL 296
+ Y A++D G C +F ++E + +N+ + +++ V R +
Sbjct: 167 HTYNAMVDVLGKCRNF---DLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAV 223
Query: 297 NIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
+ + ++ ++ G+K D + N L+ A ++ A +++ LK +++ K D T++
Sbjct: 224 DAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF--LKLFDTI---KPDARTFNI 278
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I F A+ + A + M+ + V ++S + A G + ++ EEM G
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C PN + I++H+ ++ Q A + K + G ++ IH
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED------GCVPDAKFYSSLIH------ 386
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 535
ILS T RF A + +M G+ + + ++ +
Sbjct: 387 -------ILSKTGRFK--------------------DAAEIFEDMTNQGVRRDVLVYNTM 419
Query: 536 IDICGGTENVEGAIEILKSMGD---AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
I E A+ +LK M D P+V Y +K+C K K L M
Sbjct: 420 ISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVK 479
Query: 593 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
++ + TY L++ G V E CL +++ + G P D + L++E
Sbjct: 480 NDVSIDVSTYILLIRGLCMSGKVEEA--CL-FFEEAVRKGMVPRDSTCKMLVDE 530
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 148/336 (44%), Gaps = 27/336 (8%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFT-YSTIIKVF 360
M G +PD+ ++ L+ C GRV L+ L V R+ + Y TII
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRV---------LQALALVDRMVEEGHQPYGTIINGL 51
Query: 361 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 420
+ AL + M + + V ++++I+ G A LF EM G P+
Sbjct: 52 CKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111
Query: 421 QCFNIILHACVEACQYDRAFRFFHSW---KGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
++ ++ + + ++ A + + N + +F N+ +K+G + A
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA------ 165
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSIL 535
+I R PTT TYN+++ C D + AK +++ M + SP+ +T+S L
Sbjct: 166 ---EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
I+ + V+ +EI M GI + + YTT I + + A L M S +
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
PN++T+ ++L + S E+++ AI +D+QK+
Sbjct: 283 APNYITFQSML---ASLCSKKELRKAFAILEDLQKS 315
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 152/364 (41%), Gaps = 61/364 (16%)
Query: 241 PNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNI 298
P++ + +++ GLC G +++ + + ++ + P + N L + D LN+
Sbjct: 8 PDVVTFTTLMN--GLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMG--DTESALNL 63
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
M+ +K + YN ++ C G AQ+++ E+ H + + DV TYS +I
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFP---DVITYSGMID 119
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
F + W A ++ DM +N + V +S+LINA G V +A +++ +ML G P
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
T +N ++ C+ DR +ML S S
Sbjct: 180 TTITYNSMIDG---FCKQDRL------NDAKRMLDSMASKSCS----------------- 213
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALIN------EMKTVGLSPNQITW 532
P T++TL+ Y AK + N EM G+ N +T+
Sbjct: 214 ---------------PDVVTFSTLING----YCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Query: 533 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
+ LI +++ A ++L M +G+ P+ I + + + K ++A + E+++
Sbjct: 255 TTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Query: 593 CEIH 596
E H
Sbjct: 315 SEGH 318
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 7/237 (2%)
Query: 207 AHILFCN-IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYI 265
AH++ N II K I A + + P++ Y +ID+ G + + +
Sbjct: 74 AHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQL 133
Query: 266 YEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
D++ ++I P++ F++L+N V ++ IY M G+ P +YN ++ C
Sbjct: 134 LRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCK 193
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
R++ A+ M + + DV T+ST+I + AK +++ +M G+
Sbjct: 194 QDRLNDAKRMLDSM----ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 249
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 440
NTV +++LI+ G ++ A L M+ +G PN F +L + + +AF
Sbjct: 250 NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 116/244 (47%), Gaps = 16/244 (6%)
Query: 203 LLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKS 262
++ H + II+ K D SAL +++ ++ IY AIID G + +
Sbjct: 36 MVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHA 95
Query: 263 RYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNL---GLKPDMTSYNILLK 319
+ ++ ++ ++ I P++ ++ +++ R +T + Q+++++ + PD+ +++ L+
Sbjct: 96 QNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT-DAEQLLRDMIERQINPDVVTFSALIN 154
Query: 320 ACCVAGRVDLAQDMYKELKHLESVGRLKLDVF----TYSTIIKVFADAKLWQMALKVKHD 375
A G+V A+++Y ++ L+ +F TY+++I F A ++
Sbjct: 155 ALVKEGKVSEAEEIYGDM--------LRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDS 206
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 435
M S + + V +S+LIN A V+ +++F EM G NT + ++H +
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Query: 436 YDRA 439
D A
Sbjct: 267 LDAA 270
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 105/282 (37%), Gaps = 50/282 (17%)
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 435
M G + V +++L+N G V QA+ L + M+ G +P
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----------------- 43
Query: 436 YDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 495
+G N K G +A +LS E
Sbjct: 44 -------------------YGTIINGLCKMGDTESAL---------NLLSKMEETHIKAH 75
Query: 496 TSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 553
YN ++ D + HA+ L EM G+ P+ IT+S +ID + A ++L+
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
M + I PDV+ ++ I V+ +A +Y +M I P +TYN+++ K
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 614 SVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDN 655
+ + ++ L M P+ LI +C+ DN
Sbjct: 196 RLNDAKRML---DSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 174/426 (40%), Gaps = 87/426 (20%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQI 301
++ +I A GD +R +++DL P I+ +N+++ SR+ + L +Y
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPR----PQIFPWNAIIRGYSRNNHFQDALLMYSN 109
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
MQ + PD ++ LLKAC + + + ++ ++ L DVF + +I ++A
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG----FDADVFVQNGLIALYA 165
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ A V + V+W+++++A A G +A+++F +M +P+
Sbjct: 166 KCRRLGSARTVFEGLPLP--ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWV 223
Query: 422 CFNIILHA--CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 479
+L+A C++ +LKQG +A+ V G
Sbjct: 224 ALVSVLNAFTCLQ-----------------------------DLKQGRSIHASVVKMGLE 254
Query: 480 NSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDIC 539
L + NT+ CG AK L ++MK SPN I W+ +I
Sbjct: 255 IEPDLLIS-----------LNTMYAKCGQ-VATAKILFDKMK----SPNLILWNAMISGY 298
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
AI++ M + ++PD I+ T+AI C + + +QA ++YE + + +
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV 358
Query: 600 VTYNTLLKARSKYGSVL----------------------------EVQQCLAIYQDMQKA 631
+ L+ +K GSV ++ +++Y+ M++
Sbjct: 359 FISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 632 GYKPND 637
G PND
Sbjct: 419 GVHPND 424
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 33/258 (12%)
Query: 256 CGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTS 313
CG ++ +++ + +PN+ ++N++++ +++ ++++ M N ++PD S
Sbjct: 270 CGQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 314 YNILLKACCVAGRVDLAQDMYKELKHLESVGR--LKLDVFTYSTIIKVFADAKLWQMALK 371
+ AC G ++ A+ MY E VGR + DVF S +I +FA + A
Sbjct: 326 ITSAISACAQVGSLEQARSMY------EYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 372 VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 431
V ++ + V WS++I G +AI L+ M G PN F +L AC
Sbjct: 380 VF----DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN 435
Query: 432 EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP---NGFSNSQILSFTE 488
+ + FF+ +K+ N +Q H A + Q +
Sbjct: 436 HSGMVREGWWFFNRMADHKI----------NPQQQ--HYACVIDLLGRAGHLDQAYEVIK 483
Query: 489 RFPFTPTTSTYNTLLKAC 506
P P + + LL AC
Sbjct: 484 CMPVQPGVTVWGALLSAC 501
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 341 ESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL 400
E G ++ D T+ +IK+ + A + DM GV + + LI + AG+
Sbjct: 141 ERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGI 200
Query: 401 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 460
V++++++F++M G E + +N + + +Y A R+F NKM+ EG
Sbjct: 201 VQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF-----NKMVS---EG-- 250
Query: 461 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--IN 518
PT TYN +L AL
Sbjct: 251 -------------------------------VEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 519 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
+MKT G+SP+ T++ +I+ + ++ A ++ M I P V++YTT IK +
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPND 637
L ++EEM+S I PN TY+TLL G ++E + L ++M P D
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNIL---KNMMAKHIAPKD 395
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/450 (19%), Positives = 188/450 (41%), Gaps = 22/450 (4%)
Query: 187 RCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIY 246
RC+L P+ V P +F +I +GK + +++ + +K + Y
Sbjct: 170 RCILLDMPEKGV------PWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSY 223
Query: 247 RAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM--NVNSRDLTYTLNIYQIMQN 304
++ G +M ++ + ++++ + P + +N ++ S L L ++ M+
Sbjct: 224 NSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKT 283
Query: 305 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 364
G+ PD ++N ++ C ++D A+ ++ E+K ++ V +Y+T+IK +
Sbjct: 284 RGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG----NKIGPSVVSYTTMIKGYLAVD 339
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP-NTQCF 423
L++ +MRS+G+ N +S+L+ AG + +A + + M+ P + F
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 424 NIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPNGFSN 480
+L + +A A + + G +G + K + + A + +
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIE 459
Query: 481 SQ-ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILID 537
+ IL + P S YN +++ ++ AKA L ++ G+ +Q + LI
Sbjct: 460 KEIILRHQDTLEMEP--SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIR 516
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
N + + EILK M G+ + AY IK + A T + M P
Sbjct: 517 GHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVP 576
Query: 598 NWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
+ + +++++ + G V + + I D
Sbjct: 577 DSSLFRSVIESLFEDGRVQTASRVMMIMID 606
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 495 TTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
T +YN+L K Y AK N+M + G+ P + T+++++ + +E A+
Sbjct: 219 TIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFF 278
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+ M GI PD + T I K +A L+ EMK +I P+ V+Y T++K Y
Sbjct: 279 EDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG---Y 335
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
+V V L I+++M+ +G +PN L+ C+
Sbjct: 336 LAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDA 373
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 482 QILSFTERFPFTP-TTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDI 538
Q +TER T+ ++K G S HA+ ++ +M G+ ++ + +LI+
Sbjct: 135 QFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIES 194
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 598
G V+ +++I + M D G++ + +Y + KV + + A + +M S + P
Sbjct: 195 YGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPT 254
Query: 599 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
TYN +L + L ++ L ++DM+ G P+D +I +C
Sbjct: 255 RHTYNLMLWG---FFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFC 301
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 163/377 (43%), Gaps = 25/377 (6%)
Query: 248 AIIDACGLC-GDFMKSRYIYEDLLNQ-KITPNIYVFNSL-MNVNSRDLTYTLNI-YQIMQ 303
A+I C C + +K Y +++L N ++SL M++ DL + + Y+ M+
Sbjct: 128 ALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRME 187
Query: 304 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA 363
G M Y ++ A C G + A+ ++ + V LD ++++ F
Sbjct: 188 ADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFV----LDSHIGTSLLLGFCRG 243
Query: 364 KLWQMALKVKHDMRSAGVNL--NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ ALKV D+ S V N+V++S LI+ G +E+A L ++M GC+P+T+
Sbjct: 244 LNLRDALKV-FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 422 CFNIILHACVEACQYDRAFRFFHSW--KGNKM-LGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ +++ A + D+AF F +G K + ++ + + G I A V
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILI 536
+I P+ TYN L+ D A L+ M+ PN T++ L+
Sbjct: 363 VKDRIF---------PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
+ A+ +LK M D G+ PD+++Y I + A L M +I
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 597 PNWVTYNTLLKARSKYG 613
P+ +T+ ++ A K G
Sbjct: 474 PDCLTFTAIINAFCKQG 490
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 176/433 (40%), Gaps = 57/433 (13%)
Query: 222 RDLIS-ALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLNQKITPNI 278
R LI A +D + PN++ Y +ID GLC G ++ + ++ +I P++
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLID--GLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 279 YVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKE 336
+N+L+N +D + + +M+ KP++ ++N L++ C G+ YK
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP------YK- 424
Query: 337 LKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 396
A+ + M G++ + V+++ LI+
Sbjct: 425 --------------------------------AVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
G + A +L M EP+ F I++A + + D A F + S
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI--SLD 510
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAK 514
E + L G T F IL + T + N +L + G
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALF----ILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 515 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 574
A++ ++ +GL P+ +T++ L+D + ++ G+ IL+ M +G P+V YT I
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 575 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYK 634
+ ++A L M+ + PN VTY ++K G ++ + L + M + GY+
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG---KLDRALETVRAMVERGYE 683
Query: 635 PNDYYLEELIEEW 647
ND L++ +
Sbjct: 684 LNDRIYSSLLQGF 696
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 8/264 (3%)
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
+YS +I + + A +K M G +T ++ LI A GL+++A LF+EM
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 412 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 471
+ GC+PN + +++ + + A +++ S YN+ L G +
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT-YNA-LINGYCKDG 385
Query: 472 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQ 529
VP ++L+ E+ P T+N L++ Y A L+ M GLSP+
Sbjct: 386 RVVP----AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
+++++LID ++ A ++L SM I+PD + +T I + A
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 590 MKSCEIHPNWVTYNTLLKARSKYG 613
M I + VT TL+ K G
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVG 525
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 117/263 (44%), Gaps = 44/263 (16%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIYEDLLN 271
+I+ + K ++ A E ++K PN+ + +++ GLC G K+ ++ + +L+
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME--GLCRVGKPYKAVHLLKRMLD 434
Query: 272 QKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
++P+I +N L++ R+ + + M ++PD ++ ++ A C G+ D+
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 330 AQD----MYKELKHLE------------SVGRLKLDVFTYSTIIK-----------VFAD 362
A M ++ L+ VG+ + +F T++K V D
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 363 AKLWQMALKVKHDM------RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
+ KVK ++ G+ + V +++L++ +G + + ++ E M L+GC
Sbjct: 555 --MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 417 EPNTQCFNIILHACVEACQYDRA 439
PN + II++ CQ+ R
Sbjct: 613 LPNVYPYTIIING---LCQFGRV 632
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 20/184 (10%)
Query: 521 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 580
K V +PN +++SILI +E A + MG+ G +P YT IK +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 581 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYL 640
+A L++EM PN TY L+ + G + E + + M K P+
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN---GVCRKMVKDRIFPSVITY 374
Query: 641 EELIEEWCEGVIQDNREYQA-EFSSIKKSELERPQ----SLLLEKI--------AAHLLK 687
LI +C +D R A E ++ + +P + L+E + A HLLK
Sbjct: 375 NALINGYC----KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 688 RVAD 691
R+ D
Sbjct: 431 RMLD 434
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 183/433 (42%), Gaps = 36/433 (8%)
Query: 195 KLAVRYASLLPHAHIL-----FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAI 249
K A+R L+ + I+ + ++++ KR ++ A++ + ++ H N Y A+
Sbjct: 123 KKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNAL 182
Query: 250 IDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGL 307
+ + G +S E L+ + + PN + ++ L+ R + + + G
Sbjct: 183 VRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG 242
Query: 308 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 367
+P++ SYN+LL C GR D A +++EL K +V +Y+ +++ W+
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFREL----PAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 368 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE---PNTQCFN 424
A + +M + V ++ LIN+ A G EQA+Q+ +EM + T
Sbjct: 299 EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNP 358
Query: 425 IILHACVEA-------CQYDRAFRFFHSWKGN-KMLGSFGEGYNSNLKQGSIHNATTVPN 476
+I C E C + +R +G +GS E +NS +++ A +
Sbjct: 359 VIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCE-HNSKVQE-----AFYIIQ 412
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILI 536
SN Q + + S +L + + + A L+ EM G P+ T+S LI
Sbjct: 413 SLSNKQKCCTHDFY-----KSVITSLCRK--GNTFAAFQLLYEMTRCGFDPDAHTYSALI 465
Query: 537 DICGGTENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
GA+E+L M ++ KP V + I + + A+ ++E M +
Sbjct: 466 RGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKR 525
Query: 596 HPNWVTYNTLLKA 608
PN TY L++
Sbjct: 526 MPNETTYAILVEG 538
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 58/312 (18%)
Query: 332 DMYKELKHLESV--GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
++ HLES+ G K +V + ++ A + A++V M S+G+ + A++
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 449
L+N G V A+QL E+M G NT +N ++ +G
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALV-------------------RGL 186
Query: 450 KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF---PFTPTTSTYNTLLKAC 506
MLGS +Q L F ER P TY+ LL+A
Sbjct: 187 CMLGSL-------------------------NQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 507 ----GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 562
G+D A L++E+ G PN +++++L+ + A+ + + + G K
Sbjct: 222 YKERGTD--EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 622
+V++Y ++ +++A +L EM + P+ VTYN L+ + + +G +Q L
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHG---RTEQAL 336
Query: 623 AIYQDMQKAGYK 634
+ ++M K ++
Sbjct: 337 QVLKEMSKGNHQ 348
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 150/356 (42%), Gaps = 35/356 (9%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G KP++ LL C A R+ A + ++ + S G + D Y+ ++
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKA---IRVIELMVSSGIIP-DASAYTYLVNQLCKRGN 156
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
A+++ M G NTV +++L+ G + Q++Q E ++ G PN ++
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
+L A + D A + ++++ GE NL ++ G ++ +
Sbjct: 217 LLEAAYKERGTDEAVKLL-----DEIIVKGGE---PNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 486 FTERFP---FTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICG 540
F E P F +YN LL+ C + A +L+ EM +P+ +T++ILI+
Sbjct: 269 FRE-LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Query: 541 GTENVEGAIEILKSM--GDAGIKPDVIAYTTAI-KVCVESKNFKQALTLYEEMKSCEIHP 597
E A+++LK M G+ + +Y I ++C E K + +EM P
Sbjct: 328 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK-VDLVVKCLDEMIYRRCKP 386
Query: 598 NWVTYNTLLKARSKYGSVLE----VQQCLAIYQDM-QKAGYKPNDYYLEELIEEWC 648
N TYN + GS+ E VQ+ I Q + K +D+Y + +I C
Sbjct: 387 NEGTYNAI-------GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFY-KSVITSLC 434
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 127/643 (19%), Positives = 249/643 (38%), Gaps = 124/643 (19%)
Query: 101 ELLAKLVVLGIRGRNVWTVIDTLKKVQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAE 160
EL +++V +G+ G NV T + + SL A A++V++ R +
Sbjct: 219 ELYSRMVAIGVDGDNVTTQL-------LMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271
Query: 161 AVELMEVLARFQLPI-RELVQPSDMIKRCVLSRNPKLAVRYASL---------------- 203
++ + L + L++ K CV S+ +V AS+
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 204 ---LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFM 260
+ + ++I+ K DL+SAL +D ++K PN + +I+ G+
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 261 KSRYIYEDLLNQKITP----------------------------------NIYVFNSLMN 286
K+ Y+ + +TP N++V N++++
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILS 451
Query: 287 --VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 344
+ M++ G+ P++ SYN ++ C +DLA+ ++ + LE
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI--LEK-- 507
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
LK + +TYS +I Q AL+V + M S+ + +N V + ++IN G +A
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Query: 405 IQL------------------------------------FEEMLLAGCEPNTQCFNIILH 428
+L +EEM G PN + +++
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 429 ACVEACQYDRAFRFFHSWK--GNKM-LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
+ + D+A K G K+ + ++G + K+ ++ +A+ +
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL----------- 676
Query: 486 FTERFP--FTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGG 541
F+E P+ YN+L+ + + A L +M GL + T++ LID
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 542 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
N+ A E+ M G+ PD I YT + + F + + ++EEMK + PN +
Sbjct: 737 DGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 602 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
YN ++ + G+ + + ++ +M G P+ + L+
Sbjct: 797 YNAVIAGHYREGN---LDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 117/235 (49%), Gaps = 10/235 (4%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIY 266
I + ++++ K + ALE D +K ++ Y A+ID G C + + ++
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID--GFCKRSNMESASALF 677
Query: 267 EDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
+LL + + P+ ++NSL++ N ++ L++Y+ M GL+ D+ +Y L+
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
G + LA ++Y E+ ++VG L D Y+ I+ + + +K+ +M+ V N
Sbjct: 738 GNLILASELYTEM---QAVG-LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 439
+ ++++I G +++A +L +EML G P+ F+I++ V Q RA
Sbjct: 794 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRA 848
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 159/387 (41%), Gaps = 64/387 (16%)
Query: 303 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 362
++ G + + ++N LL A + D A D+ ++ L+LDV + +
Sbjct: 155 KSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM--------LELDVIPFFPYVNRTLS 206
Query: 363 AKLWQMALKVKHDMRSA----GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
A + + +L ++ S GV+ + V L+ A +A+++ + G EP
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS----NLKQGSIHNATTV 474
++ +++ + AC + A K K+ E Y S ++KQG++ +A +
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 475 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSI 534
+ ++LS TS K +D A L ++M+ G SPN +T+S+
Sbjct: 327 KD-----EMLSDGISMNVVAATSLITGHCK--NNDLVSALVLFDKMEKEGPSPNSVTFSV 379
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE----- 589
LI+ +E A+E K M G+ P V T I+ ++ + ++AL L++E
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439
Query: 590 -----------------------------MKSCEIHPNWVTYNTLL--KARSKYGSVLEV 618
M+S I PN V+YN ++ R K + +
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 619 QQCLAIYQDMQKAGYKPNDYYLEELIE 645
++ ++ + G KPN+Y LI+
Sbjct: 500 -----VFSNILEKGLKPNNYTYSILID 521
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 128/284 (45%), Gaps = 14/284 (4%)
Query: 371 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 430
K+ +S G +N+ A++ L+NA + + A+ + +ML P N L A
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 431 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN-LKQGSIHNATTVPNGFSNSQILSFTER 489
V+ A + +G G+ + L + S+ ++LS
Sbjct: 209 VQRNSLTEAKELYSRMVA---IGVDGDNVTTQLLMRASLREEKPA----EALEVLSRAIE 261
Query: 490 FPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLS-PNQITWSILIDICGGTENVE 546
P + Y+ ++AC D A +L+ EMK L P+Q T++ +I N++
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
AI + M GI +V+A T+ I ++ + AL L+++M+ PN VT++ L+
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
+ K G E+++ L Y+ M+ G P+ +++ +I+ W +G
Sbjct: 382 EWFRKNG---EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 147/345 (42%), Gaps = 45/345 (13%)
Query: 274 ITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
I P ++V ++ + + + M GL+PD + LL A C G V A +
Sbjct: 165 IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKV 224
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
+++++ + ++ +++++ + A +V M+ AG+ + V +++L++
Sbjct: 225 FEDMRE-----KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 279
Query: 394 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKML 452
AHAG + A L +M G EPN C+ +++ A C + D A R F
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM------ 333
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH 512
E Y + I T + +GF ++
Sbjct: 334 ----ERYGC---EADIVTYTALISGFCKWGMID--------------------------K 360
Query: 513 AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 572
+++++M+ G+ P+Q+T+ ++ E E +E+++ M G PD++ Y I+
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 573 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
+ + K+A+ L+ EM++ + P T+ ++ + G ++E
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIE 465
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 174/438 (39%), Gaps = 74/438 (16%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDL 269
LF ++ F + A+E D + K+ P+ Y++ ++DA G ++ ++ED+
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 270 LNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRV 327
+K PN+ F SL+ R+ L + M+ GL+PD+ + LL AG++
Sbjct: 229 -REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 328 ----DLAQDMYKE-------------------LKHLESVGRL---------KLDVFTYST 355
DL DM K K ++ R+ + D+ TY+
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I F + V DMR GV + V + ++ A E+ ++L E+M G
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C P+ +N+++ + + A R ++ + N + + +
Sbjct: 408 CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL-------------SPGVDTFVIMI 454
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 535
NGF++ L++AC H K +++ + + +P T L
Sbjct: 455 NGFTSQGF------------------LIEACN----HFKEMVS--RGIFSAPQYGTLKSL 490
Query: 536 IDICGGTENVEGAIEILKSMGD--AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 593
++ + +E A ++ + + + + +V A+T I + K+A + +M
Sbjct: 491 LNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEM 550
Query: 594 EIHPNWVTYNTLLKARSK 611
++ P TY L+K +K
Sbjct: 551 DLMPQPNTYAKLMKGLNK 568
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 128/286 (44%), Gaps = 13/286 (4%)
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
+ +++ FA A + + A++V +M G+ + + L++A G V++A ++FE+M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 413 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 472
PN + F +L+ + A K + +NL G H A
Sbjct: 230 -EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV--VFTNLLSGYAH-AG 285
Query: 473 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKAL--INEMKTVGLSPNQ 529
+ + + +++ + F P + Y L++A C ++ +A+ EM+ G +
Sbjct: 286 KMADAYD---LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADI 342
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
+T++ LI ++ +L M G+ P + Y + + + F++ L L E+
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK 402
Query: 590 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
MK HP+ + YN +++ K G EV++ + ++ +M+ G P
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLG---EVKEAVRLWNEMEANGLSP 445
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 110/255 (43%), Gaps = 25/255 (9%)
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
L+ A A +V++A+++ +EM G EP+ F +L A + A + F +
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR--- 229
Query: 451 MLGSFGEGYNSNLKQGS--IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 508
E + NL+ + ++ ++L + P + LL S
Sbjct: 230 ------EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL----S 279
Query: 509 DYYHAKA------LINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIK 561
Y HA L+N+M+ G PN +++LI +C + ++ A+ + M G +
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCE 339
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
D++ YT I + + ++ ++M+ + P+ VTY ++ A K + ++C
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKE---QFEEC 396
Query: 622 LAIYQDMQKAGYKPN 636
L + + M++ G P+
Sbjct: 397 LELIEKMKRRGCHPD 411
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 177/414 (42%), Gaps = 46/414 (11%)
Query: 246 YRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV----NSRDLTYTLNIYQI 301
+ ++I + G G F +S +++ + I+P++ FNSL+++ + + L ++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL-FDEM 199
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK--ELKHLESVGRLKLDVFTYSTIIKV 359
+ G+ PD ++N L+ C VD A ++K EL H DV TY+TII
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNP------DVVTYNTIIDG 253
Query: 360 FADAKLWQMALKVKHDM--RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
A ++A V M ++ V+ N V++++L+ +++A+ +F +ML G +
Sbjct: 254 LCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG---YN----SNLKQGSIHN 470
PN +N ++ EA +YD GN +F +N ++ G +
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 471 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEM--KTVGLS 526
A V N ++ P +++Y+ L++ +++ A+ L NE+ K V L
Sbjct: 372 AMKVFQEMLNMKL---------HPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422
Query: 527 -----PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
P ++ + + + A ++ + + G++ D +Y T I FK
Sbjct: 423 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFK 481
Query: 582 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
A L M E P+ TY L+ K G L L Q M ++ Y P
Sbjct: 482 PAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTL---QRMLRSSYLP 532
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 154/388 (39%), Gaps = 73/388 (18%)
Query: 281 FNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK 338
FNSL+ N+ ++ ++Q M+ +G+ P + ++N LL GR +A D++ E++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 339 HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
V D +T++T+I F + A ++ DM N + V ++++I+ A
Sbjct: 201 RTYGVTP---DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRA 257
Query: 399 GLVEQAIQLFEEMLLAGCE--PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
G V+ A + ML + PN + ++ + D A FH
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM---------- 307
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL 516
L +G P TYNTL+K + +
Sbjct: 308 ------LSRG-------------------------LKPNAVTYNTLIKGLSEAHRY---- 332
Query: 517 INEMKTV---------GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
+E+K + +P+ T++ILI +++ A+++ + M + + PD +Y
Sbjct: 333 -DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEI-------HPNWVTYNTLLKARSKYGSVLEVQQ 620
+ I+ F +A TL+ E+ E+ P YN + + G + +Q
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG---KTKQ 448
Query: 621 CLAIYQDMQKAGYKPNDYYLEELIEEWC 648
+++ + K G + Y + LI C
Sbjct: 449 AEKVFRQLMKRGVQDPPSY-KTLITGHC 475
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 15/288 (5%)
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
Y ++K+FA+ ++ ++ +M G ++ LI C AGL ++ F +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 413 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 472
P +N ILH+ + QY W +ML +G+ ++ +I
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYK-----LIDWVYEQML---EDGFTPDVLTYNIVMFA 266
Query: 473 TVPNGFSNS--QILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPN 528
G ++ ++L + F+P TYN LL A G+ A L+N M+ VG+ P
Sbjct: 267 NFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPG 326
Query: 529 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 588
I ++ LID +E + G PDV+ YT I + ++A +++
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFK 386
Query: 589 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
EM PN TYN++++ G + ++ A+ ++M+ G PN
Sbjct: 387 EMTEKGQLPNVFTYNSMIRGFCMAG---KFKEACALLKEMESRGCNPN 431
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 141/357 (39%), Gaps = 90/357 (25%)
Query: 208 HILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE 267
++L C E G RD++ E + K P + Y AI+ + + ++YE
Sbjct: 191 NLLICTC-GEAGLARDVV---EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYE 246
Query: 268 DLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNL---GLKPDMTSYNILLKACCVA 324
+L TP++ +N +M N R L T +Y+++ + G PD+ +YNILL
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFR-LGKTDRLYRLLDEMVKDGFSPDLYTYNILL------ 299
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
H + G L AL + + MR GV
Sbjct: 300 --------------HHLATGNKPL-------------------AALNLLNHMREVGVEPG 326
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 444
+ +++LI+ + AG +E +E + GC P+ C+ +++ + + ++A F
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF- 385
Query: 445 SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK 504
K + G+ +PN F TYN++++
Sbjct: 386 -----KEMTEKGQ----------------LPNVF-------------------TYNSMIR 405
Query: 505 A-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
C + A AL+ EM++ G +PN + +S L++ V A E++K M + G
Sbjct: 406 GFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 11/215 (5%)
Query: 203 LLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKS 262
+L + ++F N GK L L D + K P++Y Y ++ + +
Sbjct: 257 VLTYNIVMFANF--RLGKTDRLYRLL---DEMVKDGFSPDLYTYNILLHHLATGNKPLAA 311
Query: 263 RYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNL--GLKPDMTSYNILLKA 320
+ + + P + F +L++ SR Y + + + G PD+ Y +++
Sbjct: 312 LNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
G ++ A++M+KE+ G+L +VFTY+++I+ F A ++ A + +M S G
Sbjct: 372 YISGGELEKAEEMFKEMT---EKGQLP-NVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
N N V +S+L+N +AG V +A ++ ++M+ G
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 174/399 (43%), Gaps = 62/399 (15%)
Query: 238 LDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYT-- 295
++ PN I +A+ GDF S +++ + PN Y FN ++ R LT T
Sbjct: 65 VEKPNFLIPKAV-----ELGDFNYSSFLF----SVTEEPNHYSFNYMI----RGLTNTWN 111
Query: 296 -----LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 350
L++Y+ M+ GLKPD +YN + AC + + + ++ L VG L+ DV
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF---KVG-LERDV 167
Query: 351 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 410
++I ++A A K+ ++ +TV+W+S+I+ + AG + A+ LF +
Sbjct: 168 HINHSLIMMYAKCGQVGYARKLFDEI----TERDTVSWNSMISGYSEAGYAKDAMDLFRK 223
Query: 411 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH-----------SWKGNKMLGSFGEGY 459
M G EP+ + +L AC R R ++ G+K++ +G
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGDL-RTGRLLEEMAITKKIGLSTFLGSKLISMYG--- 279
Query: 460 NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE 519
K G + +A V N Q++ +R +T + Y+ K+ A L E
Sbjct: 280 ----KCGDLDSARRVFN-----QMIK-KDRVAWTAMITVYSQNGKSS-----EAFKLFFE 324
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M+ G+SP+ T S ++ CG +E +I + ++ ++ T + + +
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 618
++AL ++E M N T+N ++ A + G E
Sbjct: 385 VEEALRVFEAMPV----KNEATWNAMITAYAHQGHAKEA 419
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 174/417 (41%), Gaps = 27/417 (6%)
Query: 243 MYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQ 300
+ I+ +I+ L G + ++ + ++ + P + N L+N + + + +
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 301 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL-KHLESVGRLKLDVFTYSTIIKV 359
M+ +G P+ SYN L+K C VD A ++ + K+ R+ ++ ++ K
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 360 FA---DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
+ KL + L D A L+ V + L+++C G V QA+++++EM
Sbjct: 241 VIGNNNKKLLEEIL----DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNV 296
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATT 473
++ +N+I+ + A+ F +G N + ++ ++ K+G A
Sbjct: 297 PADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACD 356
Query: 474 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQIT 531
+ N + P +Y +++ D A + M L P +
Sbjct: 357 LHGTMQNGGV---------APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLL 407
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
W+++ID G + A+ +L M G+KP+V I V+ A + EM+
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMR 467
Query: 592 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
S +IHP+ TYN LL A G ++ +Y +M + G +P+ EL+ C
Sbjct: 468 STKIHPDTTTYNLLLGAACTLG---HLRLAFQLYDEMLRRGCQPDIITYTELVRGLC 521
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 116/247 (46%), Gaps = 38/247 (15%)
Query: 209 ILFCNIISEFG-KRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYI 265
I+ C I+ + K +++ ALE + + + + +Y II GLC G+ + +
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR--GLCSSGNMVAAYGF 322
Query: 266 YEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCV 323
D++ + + P+++ +N+L++ ++ + +++ MQN G+ PD SY ++++ C+
Sbjct: 323 MCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCI 382
Query: 324 AGRVDLAQDMYKELKH-------------LESVGR------------------LKLDVFT 352
G V+ A + + ++ GR +K +V+T
Sbjct: 383 HGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYT 442
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
+ +I + A VK++MRS ++ +T ++ L+ A G + A QL++EML
Sbjct: 443 NNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEML 502
Query: 413 LAGCEPN 419
GC+P+
Sbjct: 503 RRGCQPD 509
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 147/348 (42%), Gaps = 23/348 (6%)
Query: 311 MTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMAL 370
++ ++ +++ C+ G++D A + K++ + + L T++ ++ A + A
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGL----ITHNHLLNGLCKAGYIEKAD 176
Query: 371 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 430
+ +MR G + N V++++LI V++A+ LF M G PN NII+HA
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA- 235
Query: 431 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF 490
CQ + K+L + +N + + + F N ++ E +
Sbjct: 236 --LCQ-----KGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVW 288
Query: 491 P-----FTPTTST-YNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGT 542
P S YN +++ C S + A + +M G++P+ T++ LI
Sbjct: 289 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 348
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
+ A ++ +M + G+ PD I+Y I+ + +A M + P + +
Sbjct: 349 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
N ++ +YG + L++ M G KPN Y LI + +G
Sbjct: 409 NVVIDGYGRYG---DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKG 453
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 171/440 (38%), Gaps = 67/440 (15%)
Query: 202 SLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHL----DGPNMYIYRAIIDACGLCG 257
L+ H H+L N + + G +E D L + + PN Y +I GLC
Sbjct: 155 GLITHNHLL--NGLCKAG-------YIEKADGLVREMREMGPSPNCVSYNTLIK--GLCS 203
Query: 258 --DFMKSRYIYEDLLNQKITPNIYVFNSLM----------NVNSRDLTYTLNIYQIMQNL 305
+ K+ Y++ + I PN N ++ N N + L L+ Q L
Sbjct: 204 VNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL 263
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
D+ IL+ +C G V A +++KE+ S + D Y+ II+ +
Sbjct: 264 ----DIVICTILMDSCFKNGNVVQALEVWKEM----SQKNVPADSVVYNVIIRGLCSSGN 315
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
A DM GVN + +++LI+A G ++A L M G P+ + +
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 426 ILHACVEACQYDRAFRFFHS------------WKGNKMLGSFGEGYNSNLKQGSIHNATT 473
I+ +RA F S W N ++ +G + G +A +
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW--NVVIDGYG-------RYGDTSSALS 426
Query: 474 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQIT 531
V L+ + P T N L+ G A + NEM++ + P+ T
Sbjct: 427 V---------LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+++L+ ++ A ++ M G +PD+I YT ++ K+A +L ++
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Query: 592 SCEIHPNWVTYNTLLKARSK 611
+ I + V + L K ++
Sbjct: 538 ATGITIDHVPFLILAKKYTR 557
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 174/406 (42%), Gaps = 70/406 (17%)
Query: 229 EAYDALKKHLDG---PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
EA++ L++ D P++ Y +ID L G + + + ++++ ++P++ +N L+
Sbjct: 406 EAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Query: 286 NVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 343
+ +R+ L IY+ M+ G KP+ + +++++ C A +V A+D + L+
Sbjct: 466 SGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPE 525
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
+ ++ +K + +A L + A K + L + L + G +E+
Sbjct: 526 NK--------ASFVKGYCEAGLSKKAYKAFVRLEYP---LRKSVYIKLFFSLCIEGYLEK 574
Query: 404 AIQLFEEMLLAGCEPN-TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 462
A + ++M EP + C KM+G+F + +N
Sbjct: 575 AHDVLKKMSAYRVEPGRSMC--------------------------GKMIGAFCK--LNN 606
Query: 463 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKT 522
+++ + T V G + F +T TY L ++ A++L +MK
Sbjct: 607 VREAQVLFDTMVERGL-------IPDLFTYTIMIHTYCRL-----NELQKAESLFEDMKQ 654
Query: 523 VGLSPNQITWSILID-----------ICG--GTENVEGAIEILKSMGDAGIKPDVIAYTT 569
G+ P+ +T+++L+D C G A E+L+ AGI DV+ YT
Sbjct: 655 RGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTV 714
Query: 570 AIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
I + N +QA L++ M + P+ V Y TL+ + + G +
Sbjct: 715 LIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYI 760
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 23/315 (7%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L ++ +++ + D YN+ A GRV+ A ++ +E+K V DV Y+T
Sbjct: 373 LEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP----DVINYTT 428
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I + AL + +M G++ + + ++ L++ A G E+ ++++E M G
Sbjct: 429 LIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG 488
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNKMLGSFGEGYNSNLKQGSIHNATT 473
+PN ++I+ A + A FF S K + SF +GY
Sbjct: 489 PKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGY-------------- 534
Query: 474 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQIT 531
G S +F R + S Y L + + Y KA ++ +M + P +
Sbjct: 535 CEAGLSKKAYKAFV-RLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSM 593
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+I NV A + +M + G+ PD+ YT I ++A +L+E+MK
Sbjct: 594 CGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMK 653
Query: 592 SCEIHPNWVTYNTLL 606
I P+ VTY LL
Sbjct: 654 QRGIKPDVVTYTVLL 668
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 517 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCV 575
E + + + +++ +++ D VE A E+L+ M D GI PDVI YTT I C+
Sbjct: 376 FKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCL 435
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
+ K AL L +EM + P+ +TYN L+ ++ G EV L IY+ M+ G KP
Sbjct: 436 QGK-VVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV---LEIYERMKAEGPKP 491
Query: 636 NDYYLEELIEEWCEGVIQDNREYQAEFSSIKKSELERPQSLLLEKIAAHLLKR 688
N +IE C + +E + FSS+++ E S + A L K+
Sbjct: 492 NAVTNSVIIEGLC--FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKK 542
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 123/277 (44%), Gaps = 28/277 (10%)
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+ ++ LI+ C+ +G + A++LF+EM+ +P F ++H + + A +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF-------PFTPTT 496
H ML +G + ++H ++ LSF +
Sbjct: 211 HD-----MLKVYG-------VRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA 258
Query: 497 STYNT----LLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
+ Y+T L+KA S+ ++ EM G P+ +T+++LI+ + E A +L
Sbjct: 259 AIYSTLISSLIKAGRSN--EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
M + G+KPDVI+Y + V K +++A L+E+M P+ ++Y + +
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
L+ ++ I +M GYKP LE +++ CE
Sbjct: 377 ---LQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE 410
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 150/362 (41%), Gaps = 53/362 (14%)
Query: 207 AHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDF--MKSRY 264
I+FCN+I+ FG+ + AL +D + ++ + +++ A CG+ MK R
Sbjct: 82 TEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERL 141
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACC 322
D + P+ +N L++ S+ + L ++ M +KP ++ L+ C
Sbjct: 142 SSIDEFGK---PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLC 198
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
RV A M ++ + V + V Y+++IK A K+K + +
Sbjct: 199 KDSRVKEALKMKHDMLKVYGV---RPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIK 255
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA-CVEACQYDRAFR 441
++ +S+LI++ AG + + EEM GC+P+T +N++++ CVE
Sbjct: 256 VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEN-------- 307
Query: 442 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
S N++L E LK P+ S + IL R
Sbjct: 308 --DSESANRVLDEMVE---KGLK----------PDVISYNMILGVFFRI----------- 341
Query: 502 LLKACGSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGI 560
+ A L +M G SP+ +++ I+ D +C G + E A+ IL M G
Sbjct: 342 ------KKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAV-ILDEMLFKGY 394
Query: 561 KP 562
KP
Sbjct: 395 KP 396
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 176/428 (41%), Gaps = 45/428 (10%)
Query: 333 MYKELK----HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
M+ EL HL++ R+ + +I F KL AL + +M +
Sbjct: 62 MFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSL 121
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW-- 446
+SL++A G +E+ + + G +P+ +NI++H C ++ +D A + F
Sbjct: 122 NSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVK 180
Query: 447 KGNKMLG-SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
K K G +FG + K + A + + + + PT Y +L+KA
Sbjct: 181 KKVKPTGVTFGTLIHGLCKDSRVKEALKMKH--------DMLKVYGVRPTVHIYASLIKA 232
Query: 506 -CG-SDYYHAKALINEMKTVGLSPNQITWSILID--ICGGTENVEGAIEILKSMGDAGIK 561
C + A L +E + + +S LI I G N I L+ M + G K
Sbjct: 233 LCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMI--LEEMSEKGCK 290
Query: 562 PDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
PD + Y I CVE+ + + A + +EM + P+ ++YN +L + + + ++
Sbjct: 291 PDTVTYNVLINGFCVENDS-ESANRVLDEMVEKGLKPDVISYNMILGV---FFRIKKWEE 346
Query: 621 CLAIYQDMQKAGYKPNDYYLEELIEEWCEG-------VIQDNREYQAEFSSIKKSELERP 673
+++DM + G P+ + + CEG VI D ++ ++ LE
Sbjct: 347 ATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG--YKPRRDRLEGF 404
Query: 674 QSLLLEKIAAHLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAFGHSVNDDILII 733
L E +L +V L + G +A + + + M KE ++D I ++
Sbjct: 405 LQKLCESGKLEILSKVISSLHRGIAG----DADVWSVMIPTMCKEPV-----ISDSIDLL 455
Query: 734 IGATKADG 741
+ K DG
Sbjct: 456 LNTVKEDG 463
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 53/350 (15%)
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
+Q L + N++L+ ++GR QD+ + + ++ G K+ V TYS+ IK F
Sbjct: 89 LQRLATVLKVQDLNVILRDFGISGR---WQDLIQLFEWMQQHG--KISVSTYSSCIK-FV 142
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
AK AL++ + +N +S+++ G ++ I+LF++M G +P+
Sbjct: 143 GAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVV 202
Query: 422 CFNIILHACVEACQ-YDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN 480
+N +L C++ Y +A GE ++ ++ S+
Sbjct: 203 TYNTLLAGCIKVKNGYPKAIELI------------GELPHNGIQMDSV------------ 238
Query: 481 SQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDI 538
Y T+L C S+ A+ I +MK G SPN +S L++
Sbjct: 239 -----------------MYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNS 281
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 598
+ + A E++ M G+ P+ + TT +KV ++ F ++ L E++S N
Sbjct: 282 YSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAEN 341
Query: 599 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
+ Y L+ SK G + E + +I+ DM+ G + + Y +I C
Sbjct: 342 EMPYCMLMDGLSKAGKLEEAR---SIFDDMKGKGVRSDGYANSIMISALC 388
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 185/428 (43%), Gaps = 60/428 (14%)
Query: 215 ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKI 274
ISE + D +S+L+ + K D I+ G+ G + ++E + Q
Sbjct: 76 ISEVQRSSDFLSSLQRLATVLKVQD------LNVILRDFGISGRWQDLIQLFE-WMQQHG 128
Query: 275 TPNIYVFNSLMN-VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
++ ++S + V +++++ L IYQ + + K ++ N +L G++D +
Sbjct: 129 KISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKL 188
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAK-LWQMALKVKHDMRSAGVNLNTVAWSSLI 392
+ ++K LK DV TY+T++ K + A+++ ++ G+ +++V + +++
Sbjct: 189 FDQMKR----DGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVL 244
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
CA G E+A ++M + G PN ++ +L++ +SWKG+
Sbjct: 245 AICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNS--------------YSWKGD--- 287
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDY 510
K+ ++++ + P TLLK G +
Sbjct: 288 ----------YKKAD--------------ELMTEMKSIGLVPNKVMMTTLLKVYIKGGLF 323
Query: 511 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 570
++ L++E+++ G + N++ + +L+D +E A I M G++ D A +
Sbjct: 324 DRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIM 383
Query: 571 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
I SK FK+A L + ++ + V NT+L A + G E++ + + + M +
Sbjct: 384 ISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAG---EMESVMRMMKKMDE 440
Query: 631 AGYKPNDY 638
P DY
Sbjct: 441 QAVSP-DY 447
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 132/292 (45%), Gaps = 29/292 (9%)
Query: 152 MVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRN--PKLAVRYASLLPHAHI 209
+V +G + ++L + + R L ++V + ++ C+ +N PK A+ LPH I
Sbjct: 176 LVKNGKLDSCIKLFDQMKRDGLK-PDVVTYNTLLAGCIKVKNGYPK-AIELIGELPHNGI 233
Query: 210 -----LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
++ +++ A +K PN+Y Y +++++ GD+ K+
Sbjct: 234 QMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293
Query: 265 IYEDLLNQKITPNIYVFNSLMNV--------NSRDLTYTLNIYQIMQNLGLKPDMTSYNI 316
+ ++ + + PN + +L+ V SR+L L ++ G + Y +
Sbjct: 294 LMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL------ESAGYAENEMPYCM 347
Query: 317 LLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQMALKVKHD 375
L+ AG+++ A+ ++ ++K G+ ++ D + S +I +K ++ A ++ D
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMK-----GKGVRSDGYANSIMISALCRSKRFKEAKELSRD 402
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 427
+ + V ++++ A AG +E +++ ++M P+ F+I++
Sbjct: 403 SETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 142/355 (40%), Gaps = 33/355 (9%)
Query: 311 MTSYNILLKACCVAGRVDLAQD---MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 367
+ S +ILL C GRV D ++ ++K + K Y T++ + +
Sbjct: 83 VVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQK----AYVTVLAILVEENQLN 138
Query: 368 MALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
+A K +MR G+ + + LI A C + G V+ +++F EM GC+P++ + +
Sbjct: 139 LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTL 198
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 486
+ + D A + F ++ T++ NG S+ +
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDC-------------APTVVTYTSLINGLCGSKNVDE 245
Query: 487 TERF-------PFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILID 537
R+ P TY++L+ D A L M G PN +T++ LI
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
+ ++ A+E+L M G+KPD Y I F++A +EM I P
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Query: 598 NWVTYNTLLKARSKYGSVLEV---QQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
N +T+N +K ++ L + +Y M+ G LE L++ C+
Sbjct: 366 NRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCK 420
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 139/355 (39%), Gaps = 60/355 (16%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNV---NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
Y+++ + P + N L+ N + L I+ M G PD +Y L+
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGL 202
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C GR+D A+ ++ E+ + V TY+++I +K A++ +M+S G+
Sbjct: 203 CRFGRIDEAKKLFTEMVEKDCAPT----VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
N +SSL++ G QA++LFE M+ GC PN + ++
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC---------- 308
Query: 442 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 501
K+ I A ++L P Y
Sbjct: 309 ----------------------KEQKIQEAV---------ELLDRMNLQGLKPDAGLYGK 337
Query: 502 LLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG--------AIEI 551
++ C S + A ++EM G++PN++TW+I + E V G A +
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT--SNEVVRGLCANYPSRAFTL 395
Query: 552 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
SM GI +V + +K + F++A+ L +E+ + P+ T+ L+
Sbjct: 396 YLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 104/229 (45%), Gaps = 16/229 (6%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC--GDFMKSRYIY 266
+ + ++I+ +++ A+ + +K PN++ Y +++D GLC G +++ ++
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD--GLCKDGRSLQAMELF 285
Query: 267 EDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
E ++ + PN+ + +L+ + + + + M GLKPD Y ++ C
Sbjct: 286 EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAI 345
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD------AKLWQMALKVKHDMRS 378
+ A + E+ +G + + T++ +K + A A + MRS
Sbjct: 346 SKFREAANFLDEM----ILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRS 401
Query: 379 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 427
G+++ SL+ G ++A+QL +E++ GC P+ + +++
Sbjct: 402 RGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 170/409 (41%), Gaps = 66/409 (16%)
Query: 264 YIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
Y+YE + P ++++N +M+ V + L +Y+ + GL + T++ IL+K
Sbjct: 214 YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGL 273
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C AGR++ ++ + ++ K DVF Y+ +IK +L+V +MR +
Sbjct: 274 CKAGRIEEMLEILQRMRE----NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEM------------------LLAGCEPNTQC- 422
+ +A+ +L+ G VE+ +LF EM +A + + C
Sbjct: 330 KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACN 389
Query: 423 ----------------FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 466
+N ++ Q D+A++ F ++ F
Sbjct: 390 LWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFE-------TLS 442
Query: 467 SIHNATTVPNGFSN-SQILSFTER-----FPFTPTTSTYNTLLKACGSDYYHAKAL--IN 518
I A V N S+ S +L ER +P + + + LL C + +A AL
Sbjct: 443 PIMVAYVVMNRLSDFSNVL---ERIGELGYPVSDYLTQFFKLL--CADEEKNAMALDVFY 497
Query: 519 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 578
+KT G + ++IL++ +++ ++ + M G +PD +Y+ AI VE
Sbjct: 498 ILKTKGHGSVSV-YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKG 556
Query: 579 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV----LEVQQCLA 623
+ K A + +E++ P+ Y +L K + G + L V++CL
Sbjct: 557 DVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLG 605
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 185/428 (43%), Gaps = 33/428 (7%)
Query: 197 AVRYASLLPHAHILFCN-IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGL 255
++R+ L P+AH CN +S + D+ A ++ ++K + + Y ++ A
Sbjct: 132 SMRFLGLQPNAHA--CNSFLSCLLRNGDIQKAFTVFEFMRKK-ENVTGHTYSLMLKAVAE 188
Query: 256 CGDFMKSRYIYEDLLNQ---KITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPD 310
+ ++ +L + + ++ ++N+ +++ R ++ T I+++M+ G
Sbjct: 189 VKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGT 248
Query: 311 MTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMAL 370
+Y++L+ GR +LA D+Y E+ + ++ L +I + W +AL
Sbjct: 249 EITYSLLVSIFVRCGRSELALDVYDEMVN----NKISLREDAMYAMISACTKEEKWDLAL 304
Query: 371 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 430
K+ M G+ N VA ++LIN+ AG V +++ + G +P+ +N +L A
Sbjct: 305 KIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTAL 364
Query: 431 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSF 486
+A +Y+ + F + + YN+ + K G A ++L
Sbjct: 365 YKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAV---------KLLYE 415
Query: 487 TERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWSILIDICGGTEN 544
E T +TS+YN ++ AC AL+ M PN T+ L+ C
Sbjct: 416 MEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSL 475
Query: 545 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 604
+ +ILK ++PDV Y AI + FK A LY +M+ + P+ T
Sbjct: 476 WDEVEDILKK-----VEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAM 530
Query: 605 LLKARSKY 612
+L+ K+
Sbjct: 531 MLQNLKKH 538
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 15/249 (6%)
Query: 401 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 460
V A++LF+ M G +PN N L + +AF F + + + G Y+
Sbjct: 123 VRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVT--GHTYS 180
Query: 461 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT---TSTYNTLLKACG--SDYYHAKA 515
LK V S ++ ER P + YNT + CG ++ Y +
Sbjct: 181 LMLKA-----VAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETER 235
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
+ MK G +IT+S+L+ I E A+++ M + I A I C
Sbjct: 236 IWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACT 295
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
+ + + AL +++ M + PN V NTL+ + K G V V +Y ++ G+KP
Sbjct: 296 KEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLV---FKVYSVLKSLGHKP 352
Query: 636 NDYYLEELI 644
++Y L+
Sbjct: 353 DEYTWNALL 361
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 158/400 (39%), Gaps = 73/400 (18%)
Query: 274 ITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMT--SYNILLKACCVAGRVDL 329
+ PN + NS ++ R D+ +++ M+ K ++T +Y+++LKA +
Sbjct: 138 LQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRK---KENVTGHTYSLMLKAVAEVKGCES 194
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIK-------VFADAKLWQMALKVKHDMRSAGVN 382
A M++EL+ E R DV Y+T I V+ ++W++ M+ G
Sbjct: 195 ALRMFRELER-EPKRRSCFDVVLYNTAISLCGRINNVYETERIWRV-------MKGDGHI 246
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ +S L++ G E A+ +++EM+ ++ AC + ++D A +
Sbjct: 247 GTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKI 306
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
F S LK+G P NTL
Sbjct: 307 FQSM----------------LKKG-------------------------MKPNLVACNTL 325
Query: 503 LKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
+ + G + + +K++G P++ TW+ L+ E +++ + +
Sbjct: 326 INSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENL 385
Query: 561 KP-DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA--RSKYGSVLE 617
+ Y TA+ C + +++A+ L EM+ + + +YN ++ A +S+ V
Sbjct: 386 CCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKV-- 443
Query: 618 VQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNRE 657
L +Y+ M + KPN + L+ G + D E
Sbjct: 444 ---ALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVE 480
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 149/349 (42%), Gaps = 56/349 (16%)
Query: 265 IYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
++E + + + P++ L+N V R I++ M LG+ ++ YN+L+ AC
Sbjct: 155 VFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACS 214
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
+G + A+ K L +E G D+FTY+T+I V+ + AL V+ M +GV
Sbjct: 215 KSGDPEKAE---KLLSEMEEKGVFP-DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
N V ++S I+ + G + +A +LF E + N + ++ D A R
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRL 329
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
+++ S G F+P TYN++
Sbjct: 330 ------REVMESRG-----------------------------------FSPGVVTYNSI 348
Query: 503 LKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
L+ D A L+ EM + P+ IT + LI+ E++ A+++ K M ++G+
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408
Query: 561 KPDVIAYTTAIK-VC--VESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
K D+ +Y I C +E +N K+ L M P + TY+ L+
Sbjct: 409 KLDMYSYKALIHGFCKVLELENAKEELF---SMIEKGFSPGYATYSWLV 454
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 147/322 (45%), Gaps = 23/322 (7%)
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
+S ++ +A A + ++ V +RS G+ + A + L+N+ L + ++F++M+
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 413 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK-----QGS 467
G N +N+++HAC ++ ++A + + G F + + N + S
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK---GVFPDIFTYNTLISVYCKKS 252
Query: 468 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGL 525
+H F + ER P TYN+ + + A L E+K +
Sbjct: 253 MH--------FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DV 303
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
+ N +T++ LID +++ A+ + + M G P V+ Y + ++ E ++A
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 586 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
L EM +I P+ +T NTL+ A Y + ++ + + + M ++G K + Y + LI
Sbjct: 364 LLTEMSGKKIEPDNITCNTLINA---YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 646 EWCEGVIQDNREYQAEFSSIKK 667
+C+ V++ + FS I+K
Sbjct: 421 GFCK-VLELENAKEELFSMIEK 441
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 180/418 (43%), Gaps = 28/418 (6%)
Query: 198 VRYASLLPHAHILFCNII-SEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC 256
+R L PH C ++ + K+R + + + + K N+++Y ++ AC
Sbjct: 159 IRSCGLKPHLQA--CTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKS 216
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSY 314
GD K+ + ++ + + P+I+ +N+L++V + + L++ M+ G+ P++ +Y
Sbjct: 217 GDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTY 276
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
N + GR+ A +++E+K + + TY+T+I + AL+++
Sbjct: 277 NSFIHGFSREGRMREATRLFREIKDDVTANHV-----TYTTLIDGYCRMNDIDEALRLRE 331
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
M S G + V ++S++ G + +A +L EM EP+ N +++A
Sbjct: 332 VMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA----- 386
Query: 435 QYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN-GFSNSQILSFTERFPFT 493
Y + + K K + G + + IH V + ++ S E+ F+
Sbjct: 387 -YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK-GFS 444
Query: 494 PTTSTYNTLLKACGSDYYHAK------ALINEMKTVGLSPNQITWSILIDICGGTENVEG 547
P +TY+ L+ +Y+ L+ E + GL + + LI E V+
Sbjct: 445 PGYATYSWLVDG----FYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDY 500
Query: 548 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 605
A + +SM G+ D + +TT + +A L++ M + + N Y ++
Sbjct: 501 AKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 136/322 (42%), Gaps = 18/322 (5%)
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
PN+ V+N+L++ + +L L + M+ GL D+ +YN LL C +GR A M
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
+++ + DV T++ +I VF A ++ +M + V+ N V ++S+IN
Sbjct: 234 LRDMMKRS----INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 394 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG 453
G + A + F+ M GC PN +N ++ + D + F
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC----- 344
Query: 454 SFGEGYNSNLKQGS--IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY 511
EG+N+++ + IH V I + TP T+ LL +
Sbjct: 345 ---EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 512 HAKALI--NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT 569
AL+ ++M+ + ++I+I + VE A E+ + G+KPD YT
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 570 AIKVCVESKNFKQALTLYEEMK 591
I ++ ++A L MK
Sbjct: 462 MILGLCKNGPRREADELIRRMK 483
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 162/401 (40%), Gaps = 56/401 (13%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN----VNSRDLTYTLN 297
++Y + +I C + + ++ P+I F SL++ VN ++L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
I +M G +P++ YN L+ C G +++A ++ E+ E G L DV TY+T++
Sbjct: 165 I--LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM---EKKG-LGADVVTYNTLL 218
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ W A ++ DM +N + V +++LI+ G +++A +L++EM+ + +
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
PN +N I++ C + R + ++ G F
Sbjct: 279 PNNVTYNSIING---LCMHGRLYDAKKTFDLMASKGCF---------------------- 313
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSIL 535
P TYNTL+ C L M G + + T++ L
Sbjct: 314 ----------------PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
I + A++I M + PD+I + + + + AL +++M+ E
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
+ V YN ++ K +V++ ++ + G KP+
Sbjct: 418 YIGIVAYNIMIHGLCKAD---KVEKAWELFCRLPVEGVKPD 455
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 15/268 (5%)
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
V ++ L+ A A+ E I ++M L G + F I++H C+ R F S
Sbjct: 72 VDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHC---FCRCSR-LSFALS 127
Query: 446 WKGNKMLGSFGEGYNSNLKQ-GSIHNATTVPNGFSNS-QILSFTERFPFTPTTSTYNTLL 503
G M GY ++ GS+ + + N ++ ++ + + P YNTL+
Sbjct: 128 VLGKMM----KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 504 KA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
C + + A L+NEM+ GL + +T++ L+ + A +L+ M I
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
PDV+ +T I V V+ N +A LY+EM + PN VTYN+++ +G + + ++
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 622 LAIYQDMQKAGYKPNDYYLEELIEEWCE 649
+ M G PN LI +C+
Sbjct: 304 FDL---MASKGCFPNVVTYNTLISGFCK 328
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 135/305 (44%), Gaps = 17/305 (5%)
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 409
+ ++ ++ A+ + ++ + M G++ + +++ LI+ + A+ +
Sbjct: 71 IVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLG 130
Query: 410 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 469
+M+ G EP+ F +LH + AF ++ GY N+ +
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL--------VILMVKSGYEPNVVVYNTL 182
Query: 470 NATTVPNGFSNS--QILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGL 525
NG N ++L+ E+ TYNTLL C S + A ++ +M +
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQAL 584
+P+ +T++ LID+ N++ A E+ K M + + P+ + Y + I +C+ + +
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 585 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
T ++ M S PN VTYNTL+ K+ V + + ++Q M G+ + + LI
Sbjct: 303 T-FDLMASKGCFPNVVTYNTLISGFCKFRM---VDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 645 EEWCE 649
+C+
Sbjct: 359 HGYCQ 363
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 115/247 (46%), Gaps = 21/247 (8%)
Query: 183 DMIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPN 242
DM+KR + NP + + F +I F K+ +L A E Y + + PN
Sbjct: 236 DMMKRSI---NPDV------------VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 243 MYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQ 300
Y +II+ + G ++ ++ + ++ PN+ +N+L++ R + + ++Q
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 301 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVF 360
M G D+ +YN L+ C G++ +A D++ + R+ D+ T+ ++
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR----RVTPDIITHCILLHGL 396
Query: 361 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 420
+ AL DMR + + VA++ +I+ A VE+A +LF + + G +P+
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 421 QCFNIIL 427
+ + I++
Sbjct: 457 RTYTIMI 463
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 232 DALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN---VN 288
D +K+ ++ P++ + A+ID G+ +++ +Y++++ + PN +NS++N ++
Sbjct: 236 DMMKRSIN-PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 289 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 348
R L + +M + G P++ +YN L+ C VD +++ + S
Sbjct: 295 GR-LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM----SCEGFNA 349
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
D+FTY+T+I + ++AL + M S V + + L++ G +E A+ F
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
++M + +NI++H +A + ++A+ F
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 144/341 (42%), Gaps = 44/341 (12%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L + +M G +PD+ +YN L++ C + ++ A +M+K++K S DV TY++
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK---SGSVCSPDVVTYTS 282
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I + A + A + DM G+ V ++ L++ A AG + A ++ +M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C P+ F ++ Q + FR W+ G F P
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRL---WEEMNARGMF-------------------P 380
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 535
N F+ S +++ N LLK A+ L+ ++ + + P ++ +
Sbjct: 381 NAFTYSILIN---------ALCNENRLLK--------ARELLGQLASKDIIPQPFMYNPV 423
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT-AIKVCVESKNFKQALTLYEEMKSCE 594
ID V A I++ M KPD I +T I C++ + F +A++++ +M +
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF-EAVSIFHKMVAIG 482
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
P+ +T ++LL K G E I + Q P
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 150/356 (42%), Gaps = 32/356 (8%)
Query: 305 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 364
L ++ +YN+L ++ C AG DLA M++ +K +L F S+ FA+
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS----FAEKG 152
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 424
A + ++S V + +SL+N VE A++LF+E L +T+ FN
Sbjct: 153 KLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 425 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 484
I++ + ++A G FG + I T+ GF S L
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSG------FG-------CEPDIVTYNTLIQGFCKSNEL 257
Query: 485 S-FTERFP-------FTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSI 534
+ +E F +P TY +++ C A +L+++M +G+ P +T+++
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
L+D + A EI M G PDV+ +T+ I Q L+EEM +
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
+ PN TY+ L+ A +L+ ++ L + P + +I+ +C+
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLG---QLASKDIIPQPFMYNPVIDGFCKA 430
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 121/278 (43%), Gaps = 13/278 (4%)
Query: 150 RRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLA------VRYASL 203
R + G +A+EL+ V++ F ++V + +I+ S A V+ S+
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCE-PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
+ + ++IS + K + A D + + P + ++D G+ + +
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 264 YIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
I +++ P++ F SL++ R ++ +++ M G+ P+ +Y+IL+ A
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C R+ A+++ +L + + + F Y+ +I F A A + +M
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQ----PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
+ + ++ LI G + +A+ +F +M+ GC P+
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 144/341 (42%), Gaps = 44/341 (12%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L + +M G +PD+ +YN L++ C + ++ A +M+K++K S DV TY++
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK---SGSVCSPDVVTYTS 282
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I + A + A + DM G+ V ++ L++ A AG + A ++ +M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
C P+ F ++ Q + FR W+ G F P
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRL---WEEMNARGMF-------------------P 380
Query: 476 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 535
N F+ S +++ N LLK A+ L+ ++ + + P ++ +
Sbjct: 381 NAFTYSILIN---------ALCNENRLLK--------ARELLGQLASKDIIPQPFMYNPV 423
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT-AIKVCVESKNFKQALTLYEEMKSCE 594
ID V A I++ M KPD I +T I C++ + F +A++++ +M +
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF-EAVSIFHKMVAIG 482
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
P+ +T ++LL K G E I + Q P
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 150/356 (42%), Gaps = 32/356 (8%)
Query: 305 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 364
L ++ +YN+L ++ C AG DLA M++ +K +L F S+ FA+
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS----FAEKG 152
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 424
A + ++S V + +SL+N VE A++LF+E L +T+ FN
Sbjct: 153 KLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 425 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 484
I++ + ++A G FG + I T+ GF S L
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSG------FG-------CEPDIVTYNTLIQGFCKSNEL 257
Query: 485 S-FTERFP-------FTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSI 534
+ +E F +P TY +++ C A +L+++M +G+ P +T+++
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
L+D + A EI M G PDV+ +T+ I Q L+EEM +
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEG 650
+ PN TY+ L+ A +L+ ++ L + P + +I+ +C+
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLG---QLASKDIIPQPFMYNPVIDGFCKA 430
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 121/278 (43%), Gaps = 13/278 (4%)
Query: 150 RRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLA------VRYASL 203
R + G +A+EL+ V++ F ++V + +I+ S A V+ S+
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCE-PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
+ + ++IS + K + A D + + P + ++D G+ + +
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 264 YIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
I +++ P++ F SL++ R ++ +++ M G+ P+ +Y+IL+ A
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C R+ A+++ +L + + + F Y+ +I F A A + +M
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQ----PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
+ + ++ LI G + +A+ +F +M+ GC P+
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 196/479 (40%), Gaps = 46/479 (9%)
Query: 187 RCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIY 246
R V SR + V PH ++E G R LIS Y
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLIS-------------------Y 83
Query: 247 RAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQN 304
++ A + + I ++ + FN+++N S ++ + M+
Sbjct: 84 TTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKE 143
Query: 305 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 364
LGL P ++YN L+K +AG+ + + ++ +L E + ++ T++ +++ + K
Sbjct: 144 LGLNPTTSTYNTLIKGYGIAGKPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG-LVEQAIQLFEEMLLA-GCEPNTQC 422
+ A +V M GV +TV ++++ G V ++ E+M++ +PN +
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 423 FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ 482
I++ + RF K ++ +NL + N ++ NGF
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRV--------EANL---VVFN--SLINGFVEVM 309
Query: 483 ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGT 542
+ T ++N ++ G+ + L MK + + IT+S +++
Sbjct: 310 DRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVL-TLMKECNVKADVITYSTVMNAWSSA 368
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
+E A ++ K M AG+KPD AY+ K V +K K+A L E + E PN V +
Sbjct: 369 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL-IVESRPNVVIF 427
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAE 661
T++ GS + + ++ M K G PN E L+ W G ++ + ++AE
Sbjct: 428 TTVISGWCSNGS---MDDAMRVFNKMCKFGVSPNIKTFETLM--W--GYLEVKQPWKAE 479
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 165/418 (39%), Gaps = 85/418 (20%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
I F +I+ F + ++ A++A +K+ P Y +I G+ G +S + +
Sbjct: 116 IFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDL 175
Query: 269 LL---NQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYN-------- 315
+L N + PNI FN L+ + + + + M+ G++PD +YN
Sbjct: 176 MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Query: 316 -----------------------------ILLKACCVAGRVDLAQDMYKELKHL------ 340
I++ C GRV + +K +
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 341 -----------ESVGRLKLDVFTYSTIIKVFAD----AKLWQMALKVKHDMRSAGVNLNT 385
E + R +D T + ++ F + +M ++V M+ V +
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADV 355
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF-- 443
+ +S+++NA + AG +E+A Q+F+EM+ AG +P+ ++I+ V A + +A
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 444 ---HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
S + + G+ SN GS+ +A V N +F +P T+
Sbjct: 416 LIVESRPNVVIFTTVISGWCSN---GSMDDAMRVFNKMC---------KFGVSPNIKTFE 463
Query: 501 TLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILID---ICGGTENVEGAIEILK 553
TL+ + A+ ++ M+ G+ P T+ +L + + G T+ AI LK
Sbjct: 464 TLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 21/272 (7%)
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 435
M + + + V +++++ G A LF EM G PN +N ++ + + +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 436 Y---DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 492
+ D+ R + N + +F N+ +K+ + A +I R+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEA---------EEIYKEMLRWSI 111
Query: 493 TPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
PTT TYN+++ C D AK +++ M + G SP+ +T+S LI+ + V+ +E
Sbjct: 112 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 171
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 610
I M GI + + YTT I + + A L EM SC + P+++T++ +L +
Sbjct: 172 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML---A 228
Query: 611 KYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEE 642
S E+++ AI +D+QK+ D++LE+
Sbjct: 229 GLCSKKELRKAFAILEDLQKS----EDHHLED 256
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
I+ K + I+A + + + PN+ Y +ID+ G + + + ++ ++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 274 ITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
I P+I F++L+N V R ++ IY+ M + P +YN ++ C RVD A+
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
M L + S G DV T+ST+I + AK +++ +M G+ NTV +++L
Sbjct: 136 RM---LDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 440
I+ G ++ A L EM+ G P+ F+ +L + +AF
Sbjct: 192 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 509 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
++ +A+ L EM G+ PN +T++ +ID + A ++L+ M + I PD++ ++
Sbjct: 25 NHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFS 84
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
I V+ + +A +Y+EM I P +TYN+++ K V + ++ L M
Sbjct: 85 ALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML---DSM 141
Query: 629 QKAGYKPNDYYLEELIEEWCEGVIQDN 655
G P+ LI +C+ DN
Sbjct: 142 ASKGCSPDVVTFSTLINGYCKAKRVDN 168
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 55/296 (18%)
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+K D+ ++ C G AQ+++ E+ H + + +V TY+ +I F + W
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEM-HEKGIFP---NVLTYNCMIDSFCHSGRW 61
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
A ++ M +N + V +S+LINA V +A ++++EML P T +N +
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 486
+ C+ DR +ML S +G
Sbjct: 122 IDG---FCKQDRVD------DAKRMLDSMA-------SKGC------------------- 146
Query: 487 TERFPFTPTTSTYNTLLKACGSDYYHAKALIN------EMKTVGLSPNQITWSILIDICG 540
+P T++TL+ Y AK + N EM G+ N +T++ LI
Sbjct: 147 ------SPDVVTFSTLING----YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 196
Query: 541 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
+++ A ++L M G+ PD I + + K ++A + E+++ E H
Sbjct: 197 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 252
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 494 PTTSTYNTLLK---ACGSDYYHAKALINEMKT-VGLSPNQITWSILIDICGGTENVEGAI 549
P T TYN LLK C D + ++EM+ + P+ ++++ILID ++N+ A+
Sbjct: 192 PDTYTYNFLLKHLCKC-KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 550 EILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
++ +G+AG KPD Y T +K C SK +A+ +Y++MK + P+ +TYNTL+
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG-SEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 609 RSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
SK G V E + L + M AGY+P+ L+ C
Sbjct: 310 LSKAGRVEEARMYL---KTMVDAGYEPDTATYTSLMNGMC 346
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 255 LC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQN-LGLKP 309
LC G +++ + ++L + P+ Y +N L+ +DL M++ +KP
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKP 228
Query: 310 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 369
D+ S+ IL+ C + +L + MY + L + G K D F Y+TI+K F A
Sbjct: 229 DLVSFTILIDNVCNSK--NLREAMYL-VSKLGNAG-FKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 370 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
+ V M+ GV + + +++LI + AG VE+A + M+ AG EP+T + +++
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
+ +M N GL+PD + +I +++ C GRVD A+D+ KEL S D +TY+ ++
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS----PPDTYTYNFLL 201
Query: 358 KVFADAKLWQMALKVKHDMRSA-GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
K K + + +MR V + V+++ LI+ ++ + +A+ L ++ AG
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 417 EPNTQCFNIILHA 429
+P+ +N I+
Sbjct: 262 KPDCFLYNTIMKG 274
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 229 EAYDALK----KHLDGPNMYIYRAIIDACGLCGDF-MKSRYIYEDLLNQKITPNIYVFNS 283
EA D +K KH P+ Y Y ++ C D + ++ E + + P++ F
Sbjct: 177 EAKDLMKELTEKH-SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 284 LMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
L++ NS++L + + + N G KPD YN ++K C + A +YK++K E
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE-E 294
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
V + D TY+T+I + A + A M AG +T ++SL+N G
Sbjct: 295 GV---EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 44/208 (21%)
Query: 492 FTPTTSTYNTLL----KACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG 547
F P ST+ LL +A S + ++N M GL P+Q+T I + T V+
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 548 AIEILKSM------------------------------------GDAGIKPDVIAYTTAI 571
A +++K + D +KPD++++T I
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
SKN ++A+ L ++ + P+ YNT++K + ++ + + + +Y+ M++
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG---FCTLSKGSEAVGVYKKMKEE 294
Query: 632 GYKPNDYYLEELIEEWCE-GVIQDNREY 658
G +P+ LI + G +++ R Y
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMY 322
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 169/381 (44%), Gaps = 38/381 (9%)
Query: 280 VFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH 339
V N L N RD + I M+ LGL+P + Y+ ++ + GRV A++ + K
Sbjct: 553 VVNELCKKNDRDAAFA--IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA--KM 608
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
LES ++ D Y +I +A A ++ ++ + ++ ++ LI+ G
Sbjct: 609 LES--GIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Query: 400 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY 459
++E+ Q ++ML G PN + ++ ++ + +F F G GE
Sbjct: 667 MMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLF---------GLMGE-- 715
Query: 460 NSNLKQGSIHNATTVPNGF------SNSQIL------SFTERFPFTPTTSTYNTLLKACG 507
+++K I T + + Q++ +R T + + L G
Sbjct: 716 -NDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYG 774
Query: 508 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
S + A +I ++K + PN + +I ++ A L+SM GI P+++ Y
Sbjct: 775 SKSF-AMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTY 832
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
T +K +E+ + + A+ L+E +CE P+ V Y+TLLK + L+ LA+ +
Sbjct: 833 TILMKSHIEAGDIESAIDLFEG-TNCE--PDQVMYSTLLKGLCDFKRPLDA---LALMLE 886
Query: 628 MQKAGYKPNDYYLEELIEEWC 648
MQK+G PN E+L++ C
Sbjct: 887 MQKSGINPNKDSYEKLLQCLC 907
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 481 SQILSFTERFPFTPTTSTY----NTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILI 536
+ +++ + F P TY N L K +D A A+I+ M+ +GL P +S +I
Sbjct: 532 ASLVNIIQELDFVPDVDTYLIVVNELCKK--NDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
G V A E M ++GI+PD IAY I + +A L EE+ +
Sbjct: 590 GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 597 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
P+ TY L+ K G + + Q L M + G PN
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYL---DKMLEDGLSPN 686
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 155/387 (40%), Gaps = 62/387 (16%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
+I+ + + + A E + + KH P+ + Y +I G K + +L
Sbjct: 623 MINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG 682
Query: 274 ITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILL----KACCVAGRV 327
++PN+ ++ +L+ + D ++ ++ +M +K D +Y LL +A +
Sbjct: 683 LSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKR 742
Query: 328 DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA 387
+ + KE K L+ + R K V S++ + + ++ KVK + N
Sbjct: 743 QVIVEPGKE-KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIP-----NLYL 796
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 447
+++I AG +++A E M G PN + I++ + +EA + A F
Sbjct: 797 HNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF---- 852
Query: 448 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG 507
EG N P Y+TLLK
Sbjct: 853 ---------EGTNCE-------------------------------PDQVMYSTLLKGL- 871
Query: 508 SDYYH---AKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPD 563
D+ A AL+ EM+ G++PN+ ++ L+ +C +E A++++K M I P
Sbjct: 872 CDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTME-AVKVVKDMAALDIWPR 930
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEM 590
I +T I + E K ++A L+ M
Sbjct: 931 SINHTWLIYILCEEKKLREARALFAIM 957
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 10/160 (6%)
Query: 494 PTTSTYNTLLK---ACGSDYYHAKALINEMKT-VGLSPNQITWSILIDICGGTENVEGAI 549
P T TYN LLK C D + ++EM+ + P+ ++++ILID ++N+ A+
Sbjct: 192 PDTYTYNFLLKHLCKC-KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 550 EILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
++ +G+AG KPD Y T +K C SK +A+ +Y++MK + P+ +TYNTL+
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG-SEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 609 RSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
SK G V E + L + M AGY+P+ L+ C
Sbjct: 310 LSKAGRVEEARMYL---KTMVDAGYEPDTATYTSLMNGMC 346
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 52/328 (15%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
+ +M N GL+PD + +I +++ C GRVD A+D+ KEL S D +TY+ ++
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS----PPDTYTYNFLL 201
Query: 358 KVFADAKLWQMALKVKHDMRSA-GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
K K + + +MR V + V+++ LI+ ++ + +A+ L ++ AG
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
+P+ +N I+ F KG++ +G + + +K+ +
Sbjct: 262 KPDCFLYNTIMKG------------FCTLSKGSEAVGVYKK-----MKEEGVE------- 297
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTL---LKACGSDYYHAKALINEMKTVGLSPNQITWS 533
P TYNTL L G A+ + M G P+ T++
Sbjct: 298 -----------------PDQITYNTLIFGLSKAGR-VEEARMYLKTMVDAGYEPDTATYT 339
Query: 534 ILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
L++ +C E++ GA+ +L+ M G P+ Y T + +++ + + LYE MKS
Sbjct: 340 SLMNGMCRKGESL-GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS 398
Query: 593 CEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
+ Y TL+++ K G V E +
Sbjct: 399 SGVKLESNGYATLVRSLVKSGKVAEAYE 426
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 12/228 (5%)
Query: 229 EAYDALK----KHLDGPNMYIYRAIIDACGLCGDF-MKSRYIYEDLLNQKITPNIYVFNS 283
EA D +K KH P+ Y Y ++ C D + ++ E + + P++ F
Sbjct: 177 EAKDLMKELTEKH-SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 284 LMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
L++ NS++L + + + N G KPD YN ++K C + A +YK++K E
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE-E 294
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
V + D TY+T+I + A + A M AG +T ++SL+N G
Sbjct: 295 GV---EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 449
A+ L EEM GC PN +N +LH +A D+ + K +
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 18/265 (6%)
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 435
M + G+ + V + + G V++A L +E+ P+T +N +L +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 436 YDRAFRFFHSWKGN----KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 491
+ F + + L SF ++ ++ A + + N+
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG--------- 260
Query: 492 FTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
F P YNT++K C S A + +MK G+ P+QIT++ LI VE A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
LK+M DAG +PD YT+ + AL+L EEM++ PN TYNTLL
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYK 634
K + + + +Y+ M+ +G K
Sbjct: 381 CK---ARLMDKGMELYEMMKSSGVK 402
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 44/208 (21%)
Query: 492 FTPTTSTYNTLL----KACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG 547
F P ST+ LL +A S + ++N M GL P+Q+T I + T V+
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 548 AIEILKSM------------------------------------GDAGIKPDVIAYTTAI 571
A +++K + D +KPD++++T I
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
SKN ++A+ L ++ + P+ YNT++K + ++ + + + +Y+ M++
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG---FCTLSKGSEAVGVYKKMKEE 294
Query: 632 GYKPNDYYLEELIEEWCE-GVIQDNREY 658
G +P+ LI + G +++ R Y
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMY 322
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 49/322 (15%)
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M G+KP + + LL + C V+ AQ+ + + K V K TYS +++
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAK----TYSILVR 216
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
+A + A KV +M ++ +A+++L++A +G V+ ++F+EM G +P
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ F I +HA +A G +H+A
Sbjct: 277 DAYSFAIFIHAYCDA--------------------------------GDVHSAY------ 298
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITW-SIL 535
++L +R+ P T+N ++K C ++ A L++EM G +P+ T+ SI+
Sbjct: 299 ---KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
C E V A ++L M PD Y +K+ + F +A ++E M +
Sbjct: 356 AYHCDHCE-VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKF 414
Query: 596 HPNWVTYNTLLKARSKYGSVLE 617
+P TY ++ + LE
Sbjct: 415 YPTVATYTVMIHGLVRKKGKLE 436
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNI 298
P+ Y ++ D +R +++++L + ++ +N+L++ S D+ +
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+Q M NLGLKPD S+ I + A C AG V A + +K + V +V+T++ IIK
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVP----NVYTFNHIIK 321
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN-ACAHAGLVEQAIQLFEEMLLAGCE 417
+ A + +M G N +T ++S++ C H V +A +L M C
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE-VNRATKLLSRMDRTKCL 380
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
P+ +N++L + ++DRA W+G
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEI---WEG 408
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 101/261 (38%), Gaps = 46/261 (17%)
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
+ A + A L +A + F M+ G +P + +LH+ + + A FF KG
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKG-- 201
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS-- 508
F P+ TY+ L++
Sbjct: 202 ---------------------------------------FGIVPSAKTYSILVRGWARIR 222
Query: 509 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
D A+ + +EM + + ++ L+D + +V+G ++ + MG+ G+KPD ++
Sbjct: 223 DASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFA 282
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
I ++ + A + + MK ++ PN T+N ++K K +V + +M
Sbjct: 283 IFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE---KVDDAYLLLDEM 339
Query: 629 QKAGYKPNDYYLEELIEEWCE 649
+ G P+ + ++ C+
Sbjct: 340 IQKGANPDTWTYNSIMAYHCD 360
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 55/312 (17%)
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
A +V +M + GV + V++SS+I+ + G + + ++LF+ M EP+ + +N ++H
Sbjct: 286 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVH 345
Query: 429 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 488
A +A A NL + + E
Sbjct: 346 ALAKASFVSEA---------------------RNLMK-------------------TMEE 365
Query: 489 RFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 546
P TYN+L+K C + AK + +EM GL P T+ + I E V
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV- 424
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
E+L M G +P V Y I+ ++F L L++EMK + P+ +Y ++
Sbjct: 425 --FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGV------IQDNREYQA 660
G ++++ Y++M+ G +PN+ +E++I+ W G I D++
Sbjct: 483 HGLFLNG---KIEEAYGYYKEMKDKGMRPNE-NVEDMIQSWFSGKQYAEQRITDSKGEVN 538
Query: 661 EFSSIKKSELER 672
+ + +KKSE E+
Sbjct: 539 KGAIVKKSEREK 550
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 103/226 (45%), Gaps = 10/226 (4%)
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
+ H + + ++IS + K L L+ +D +KK P+ +Y A++ A ++R
Sbjct: 298 VKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEAR 357
Query: 264 YIYEDLLNQK-ITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+ + + +K I PN+ +NSL+ +R ++ M GL P + +Y+ ++
Sbjct: 358 NLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI 417
Query: 321 CCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
+ +++++ L + +G + V TY +I+ + + L + +M+
Sbjct: 418 ------LRTGEEVFELLAKMRKMG-CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKT 470
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
V + ++ +I+ G +E+A ++EM G PN ++I
Sbjct: 471 VGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 516
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L Y+ M+ + P+ + N+++ C +G++D ++ L+ +E +G DV +Y+T
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL---LQDMERLGFRATDV-SYNT 278
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I + L ALK+K+ M +G+ N V +++LI+ A +++A ++F EM
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNA 471
PNT +N +++ + ++ AFRF+ N + YN+ + KQ A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI-LTYNALIFGLCKQAKTRKA 397
Query: 472 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLL--KACGSDYYHAKALINEMKTVGLSPNQ 529
+Q + ++ P +ST++ L+ + + L M G PN+
Sbjct: 398 ---------AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 530 ITWSILIDICGGTENVEGAIEILKSM 555
T+++L+ E+ +GA ++L+ M
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 49/333 (14%)
Query: 280 VFNSLMNVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL 337
VF+SL + + + + M++ G P + S N + + GRVD+A Y+E+
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 338 KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAH 397
+ ++ + +T + ++ + + +++ DM G V++++LI
Sbjct: 230 RRC----KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 398 AGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE 457
GL+ A++L M +G +PN FN ++H A + A + F K
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK---------- 335
Query: 458 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKA 515
A V P T TYNTL+ D+ A
Sbjct: 336 -------------AVNV------------------APNTVTYNTLINGYSQQGDHEMAFR 364
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
+M G+ + +T++ LI A + +K + + P+ ++ I
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
KN + LY+ M HPN T+N L+ A
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 60/362 (16%)
Query: 293 TYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL----KHLESVGRLKL 348
T+ + ++ + +N K S +L+ V G VDL ++ L + +S R+
Sbjct: 117 THAIVLHTLTKNRKFK----SAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV-- 170
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
+ ++ K FA K ++ A M+ G + ++ +++ G V+ A++ +
Sbjct: 171 ----FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
EM PN N+++ + + D+
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGI---------------------------- 258
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLS 526
++L ER F T +YNTL+ C A L N M GL
Sbjct: 259 -------------ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
PN +T++ LI ++ A ++ M + P+ + Y T I + + + A
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
YE+M I + +TYN L+ K + Q +++ K PN LI
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ---FVKELDKENLVPNSSTFSALIMG 422
Query: 647 WC 648
C
Sbjct: 423 QC 424
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 42/262 (16%)
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 447
+ SL AH A F +M G P + N + + + + D A RF+ +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 448 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG 507
K+ + Y N+ + + G ++L ER F T +YNTL+
Sbjct: 231 RCKISPN---PYTLNMVMSGYCRSGKLDKGI---ELLQDMERLGFRATDVSYNTLIAG-- 282
Query: 508 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
+ K L++ A+++ MG +G++P+V+ +
Sbjct: 283 ---HCEKGLLSS----------------------------ALKLKNMMGKSGLQPNVVTF 311
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
T I + ++A ++ EMK+ + PN VTYNTL+ S+ G + + Y+D
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG---DHEMAFRFYED 368
Query: 628 MQKAGYKPNDYYLEELIEEWCE 649
M G + + LI C+
Sbjct: 369 MVCNGIQRDILTYNALIFGLCK 390
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L Y+ M+ + P+ + N+++ C +G++D ++ L+ +E +G DV +Y+T
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL---LQDMERLGFRATDV-SYNT 278
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I + L ALK+K+ M +G+ N V +++LI+ A +++A ++F EM
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNA 471
PNT +N +++ + ++ AFRF+ N + YN+ + KQ A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI-LTYNALIFGLCKQAKTRKA 397
Query: 472 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLL--KACGSDYYHAKALINEMKTVGLSPNQ 529
+Q + ++ P +ST++ L+ + + L M G PN+
Sbjct: 398 ---------AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 530 ITWSILIDICGGTENVEGAIEILKSM 555
T+++L+ E+ +GA ++L+ M
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 49/333 (14%)
Query: 280 VFNSLMNVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL 337
VF+SL + + + + M++ G P + S N + + GRVD+A Y+E+
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 338 KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAH 397
+ ++ + +T + ++ + + +++ DM G V++++LI
Sbjct: 230 RRC----KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 398 AGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE 457
GL+ A++L M +G +PN FN ++H A + A + F K
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK---------- 335
Query: 458 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKA 515
A V P T TYNTL+ D+ A
Sbjct: 336 -------------AVNV------------------APNTVTYNTLINGYSQQGDHEMAFR 364
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
+M G+ + +T++ LI A + +K + + P+ ++ I
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
KN + LY+ M HPN T+N L+ A
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 133/362 (36%), Gaps = 60/362 (16%)
Query: 293 TYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL----KHLESVGRLKL 348
T+ + ++ + +N K S +L+ V G VDL ++ L + +S R+
Sbjct: 117 THAIVLHTLTKNRKFK----SAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV-- 170
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
+ ++ K FA K ++ A M+ G + ++ +++ G V+ A++ +
Sbjct: 171 ----FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
EM PN N+++ + + D+
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGI---------------------------- 258
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLS 526
++L ER F T +YNTL+ C A L N M GL
Sbjct: 259 -------------ELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
PN +T++ LI ++ A ++ M + P+ + Y T I + + + A
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
YE+M I + +TYN L+ K + Q +++ K PN LI
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ---FVKELDKENLVPNSSTFSALIMG 422
Query: 647 WC 648
C
Sbjct: 423 QC 424
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 42/262 (16%)
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 447
+ SL AH A F +M G P + N + + + + D A RF+ +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 448 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG 507
K+ + Y N+ + + G ++L ER F T +YNTL+
Sbjct: 231 RCKISPN---PYTLNMVMSGYCRSGKLDKGI---ELLQDMERLGFRATDVSYNTLIAG-- 282
Query: 508 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
+ K L++ A+++ MG +G++P+V+ +
Sbjct: 283 ---HCEKGLLSS----------------------------ALKLKNMMGKSGLQPNVVTF 311
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
T I + ++A ++ EMK+ + PN VTYNTL+ S+ G + + Y+D
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG---DHEMAFRFYED 368
Query: 628 MQKAGYKPNDYYLEELIEEWCE 649
M G + + LI C+
Sbjct: 369 MVCNGIQRDILTYNALIFGLCK 390
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 163/397 (41%), Gaps = 68/397 (17%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
I F +I+ F + ++ A++A +K+ P Y +I G+ G +S + +
Sbjct: 116 IFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDL 175
Query: 269 LL---NQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYN-------- 315
+L N + PNI FN L+ + + + + M+ G++PD +YN
Sbjct: 176 MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Query: 316 -----------------------------ILLKACCVAGRVDLAQDMYKELKHLESVGRL 346
I++ C GRV + +K + R+
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM----RV 291
Query: 347 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 406
+ ++ ++++I F + +V M+ V + + +S+++NA + AG +E+A Q
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 407 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF-----HSWKGNKMLGSFGEGYNS 461
+F+EM+ AG +P+ ++I+ V A + +A S + + G+ S
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCS 411
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINE 519
N GS+ +A V N +F +P T+ TL+ + A+ ++
Sbjct: 412 N---GSMDDAMRVFNKMC---------KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 459
Query: 520 MKTVGLSPNQITWSILID---ICGGTENVEGAIEILK 553
M+ G+ P T+ +L + + G T+ AI LK
Sbjct: 460 MRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 186/479 (38%), Gaps = 71/479 (14%)
Query: 187 RCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIY 246
R V SR + V PH ++E G R LIS Y
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLIS-------------------Y 83
Query: 247 RAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQN 304
++ A + + I ++ + FN+++N S ++ + M+
Sbjct: 84 TTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKE 143
Query: 305 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 364
LGL P ++YN L+K +AG+ + + ++ +L E + ++ T++ +++ + K
Sbjct: 144 LGLNPTTSTYNTLIKGYGIAGKPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG-LVEQAIQLFEEMLLA-GCEPNTQC 422
+ A +V M GV +TV ++++ G V ++ E+M++ +PN +
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 423 FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ 482
I++ + RF K ++ +NL NS
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRV--------EANLV-------------VFNSL 301
Query: 483 ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGT 542
I F E D ++ MK + + IT+S +++
Sbjct: 302 INGFVEVM------------------DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSA 343
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
+E A ++ K M AG+KPD AY+ K V +K K+A L E + E PN V +
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL-IVESRPNVVIF 402
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAE 661
T++ GS + + ++ M K G PN E L+ W G ++ + ++AE
Sbjct: 403 TTVISGWCSNGS---MDDAMRVFNKMCKFGVSPNIKTFETLM--W--GYLEVKQPWKAE 454
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 119/265 (44%), Gaps = 47/265 (17%)
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
+ +IN G+ E A ++F+EM C+ FN +L+ACV + ++D F G
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG 507
+ P ++YNTL+K CG
Sbjct: 170 ----------------------------------------KLSIEPDVASYNTLIKGLCG 189
Query: 508 -SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
+ A ALI+E++ GL P+ IT++IL+ E +I M + +K D+ +
Sbjct: 190 KGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRS 249
Query: 567 YTTA-IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 625
Y + + +E+K+ ++ ++L++++K E+ P+ T+ ++K + S ++ + + Y
Sbjct: 250 YNARLLGLAMENKS-EEMVSLFDKLKGNELKPDVFTFTAMIKG---FVSEGKLDEAITWY 305
Query: 626 QDMQKAGYKPNDYYLEELIEEWCEG 650
++++K G +P + L+ C+
Sbjct: 306 KEIEKNGCRPLKFVFNSLLPAICKA 330
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 47/242 (19%)
Query: 241 PNM----YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTY 294
PNM ++ R II+ G G F ++ +++++ + FN+L+N VNS+
Sbjct: 101 PNMSKEGFVAR-IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDL 159
Query: 295 TLNIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 353
I+ ++ L ++PD+ SYN L+K C G A + E +E+ G LK D T+
Sbjct: 160 VEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE---IENKG-LKPDHITF 215
Query: 354 STII-------KVFADAKLWQMALK--VKHDMRSAGVNL--------------------- 383
+ ++ K ++W ++ VK D+RS L
Sbjct: 216 NILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKG 275
Query: 384 -----NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 438
+ ++++I G +++AI ++E+ GC P FN +L A +A +
Sbjct: 276 NELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLES 335
Query: 439 AF 440
A+
Sbjct: 336 AY 337
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 143/326 (43%), Gaps = 26/326 (7%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKIT-PNIYVFNSLMN---VNSRDLTYTL 296
PN I+ ++ GD + + E++ I+ PN +++LM+ +SR
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 297 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 356
++ G+ PD ++N+++ C AG V+ A+ + +K +V+ YS +
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKK----NGCNPNVYNYSAL 309
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
+ F Q A + +++ G+ L+TV +++L+N G ++A++L EM + C
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS---IHNATT 473
+T +N+IL + + A + W GS G +L +GS I NA
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQW------GSEG----VHLNKGSYRIILNALC 419
Query: 474 VPNGFSNS-QILSFTERFPFTPTTSTYNTL-LKACGSDYYH--AKALINEMKTVGLSPNQ 529
+ + LS P +T+N L ++ C S Y + LI ++ +GL P
Sbjct: 420 CNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLR-IGLIPGP 478
Query: 530 ITWSILIDICGGTENVEGAIEILKSM 555
+W +++ + E+L S+
Sbjct: 479 KSWGAVVESICKERKLVHVFELLDSL 504
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 227 ALEAY-DALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
A+E + D + K P+ + +I+ G+ +++ I + + PN+Y +++LM
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 286 NVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 343
N + + + ++ GLK D Y L+ C G D A + E+K
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK----A 366
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
R + D TY+ I++ + + AL++ S GV+LN ++ ++NA G +E+
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Query: 404 AIQLFEEMLLAGCEPNTQCFN-IILHAC 430
A++ M G P+ +N +++ C
Sbjct: 427 AVKFLSVMSERGIWPHHATWNELVVRLC 454
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 491 PFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
P ST LL G K L+ +GL PN ++IL+ ++ A
Sbjct: 158 PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFL 217
Query: 551 ILKSMGDAGIK-PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE-IHPNWVTYNTLLKA 608
+++ M +GI P+ I Y+T + K+A+ L+E+M S E I P+ VT+N ++
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 609 RSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQAEFSSIKK 667
+ G EV++ I M+K G PN Y L+ +C+ G IQ E + F +KK
Sbjct: 278 FCRAG---EVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ---EAKQTFDEVKK 331
Query: 668 SELE 671
+ L+
Sbjct: 332 TGLK 335
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 146/349 (41%), Gaps = 35/349 (10%)
Query: 290 RDLTYTLNIY-QIMQNLGLKPDMTSYNILLKACCVAGR---VD--LAQDMYKELKHLESV 343
RD L+I+ + Q G + +Y++LL + VD L Q Y+ + ES+
Sbjct: 67 RDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESL 126
Query: 344 GRLKLDVFTYSTI-IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 402
+ F+ S + KV L Q+ +VK + + LN + S +N +
Sbjct: 127 FLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVN-------LS 179
Query: 403 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 462
+ + L+ + L G +PNT FNI++ + + AF K + G Y
Sbjct: 180 RKLLLYAKHNL-GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRS------GISY--- 229
Query: 463 LKQGSIHNATTVPNGFSNSQILSFTERFP-------FTPTTSTYNTLLKA-C-GSDYYHA 513
SI +T + F++S+ E F +P T+N ++ C + A
Sbjct: 230 --PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 514 KALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 573
K +++ MK G +PN +S L++ ++ A + + G+K D + YTT +
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 574 CVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 622
+ +A+ L EMK+ + +TYN +L+ S G E Q L
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 151/374 (40%), Gaps = 62/374 (16%)
Query: 205 PHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
P +F + I + + R + AL A+D +K+ +DG
Sbjct: 154 PELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG------------------------ 189
Query: 265 IYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
PN+ V+N+++N V S D+ L YQ M KPD+ ++NIL+ C
Sbjct: 190 ----------KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYC 239
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
+ + DLA D+++E+K + +V +++T+I+ F + + +K+ ++M G
Sbjct: 240 RSSKFDLALDLFREMKE----KGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCR 295
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ L++ G V+ A L ++L P+ + ++ + RA
Sbjct: 296 FSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEM 355
Query: 443 FHS-WKGNKM-----LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTT 496
WK + + EG K G A+ N+ IL P +
Sbjct: 356 MEELWKKGQTPCFIACTTLVEGLR---KSGRTEKASGFMEKMMNAGIL---------PDS 403
Query: 497 STYNTLLKA-CGSDY-YHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILK 553
T+N LL+ C SD+ A L + G P++ T+ +L+ EG + ++
Sbjct: 404 VTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEV-LVN 462
Query: 554 SMGDAGIKPDVIAY 567
M D + PD+ Y
Sbjct: 463 EMLDKDMLPDIFTY 476
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 127/303 (41%), Gaps = 21/303 (6%)
Query: 318 LKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
+ A C A ++D A + +K L K +V Y+T++ + + AL+ M
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG---KPNVGVYNTVVNGYVKSGDMDKALRFYQRMG 220
Query: 378 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 437
+ ++ LIN + + A+ LF EM GCEPN FN ++ + + + +
Sbjct: 221 KERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIE 280
Query: 438 RAFRFFHSWKGNKMLGSFGEGYNSNL-----KQGSIHNATTVPNGFSNSQILSFTERFPF 492
+ +++ ++ F E L ++G + +A + N ++L
Sbjct: 281 EGVKM--AYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL-------- 330
Query: 493 TPTTSTYNTLL-KACGSDY-YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
P+ Y +L+ K CG + A ++ E+ G +P I + L++ + E A
Sbjct: 331 -PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 610
++ M +AGI PD + + ++ S + A L S P+ TY+ L+ +
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 611 KYG 613
K G
Sbjct: 450 KEG 452
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 189/481 (39%), Gaps = 68/481 (14%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCG--DFMKSRYIYED 268
+C +I F K + A + ++ +++ ++ +Y +I GLC D + +Y +
Sbjct: 286 YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIG--GLCKHKDLEMALSLYLE 343
Query: 269 LLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
+ I P+ + L+ S + + I+ ++ K M Y L + R D
Sbjct: 344 IKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFI---RND 400
Query: 329 LAQDMYKELKHL----ESVGRLKL-------------DVFTYSTIIKVFADAKLWQMALK 371
L + Y +++L ES G ++ D + S +I A MA+
Sbjct: 401 LVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVT 460
Query: 372 VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 431
+ HD+ G+ + ++++I G E++++L EM AG EP+ N I
Sbjct: 461 LLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLA 520
Query: 432 EACQYDRA--------FRFFHSW------------------KGNKMLGSF-GEGYNSNLK 464
E C + A F F W K L GEG+
Sbjct: 521 ERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF----- 575
Query: 465 QGSIHNATTVPNGF-SNSQILSFTERF------PFTPTTSTYNTLLKA-C-GSDYYHAKA 515
G + +T +G N + E F P Y+ L+KA C A
Sbjct: 576 LGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADI 635
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
L NEM + GL P T++ +ID ++ + + M + PDVI YT+ I
Sbjct: 636 LFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
S +A+ + EMK + +PN +T+ L++ K G E L +++M++ +P
Sbjct: 696 ASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEA---LVYFREMEEKEMEP 752
Query: 636 N 636
+
Sbjct: 753 D 753
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 155/379 (40%), Gaps = 57/379 (15%)
Query: 271 NQKITPNI----YVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
N+ I P+ V N L+ N D+ TL ++ I+QN GL P YN +++ C GR
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTL-LHDIVQN-GLIPGPMMYNNIIEGMCKEGR 489
Query: 327 VDLAQDMYKELK--------------------HLESVGRL----KLDVFTYSTIIK--VF 360
+ + + E+K + VG L K+ + + IK F
Sbjct: 490 SEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF 549
Query: 361 ADAKLWQM-----ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
KL + A K D+ G + VA ++ I+ V++ ++LF ++ G
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNK-MLGSFGEGYNSNLKQGSIHNAT 472
P+ +++++ A +AC+ A F+ KG K + ++ + K+G I
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR-- 667
Query: 473 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQI 530
G S + E+ P TY +L+ + ++A+ NEMK PN+I
Sbjct: 668 ----GLSCIVRMYEDEK---NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRI 720
Query: 531 TWSILID---ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 587
T+ LI CG + A+ + M + ++PD Y + + + S+N ++
Sbjct: 721 TFMALIQGLCKCGWSGE---ALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIF 777
Query: 588 EEMKSCEIHPNWVTYNTLL 606
EM P V N +L
Sbjct: 778 REMVHKGRFPVSVDRNYML 796
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 119/302 (39%), Gaps = 47/302 (15%)
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
DV +YS I++ KL+ + V M GVN + + +++ V +AI+LF
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
EE G + +T+ FN +L E A F++ KGN
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGN------------------- 250
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLS 526
PF + +YN ++ + + ++ EM G
Sbjct: 251 ---------------------IPF--DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFG 287
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
P+ +++S LI+ G T + ++EI ++ G PD Y I + +++F +++
Sbjct: 288 PDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRY 347
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
Y M E PN TY+ L+ K +V L I+++M G P + ++
Sbjct: 348 YRRMLDEECEPNLETYSKLVSGLIKG---RKVSDALEIFEEMLSRGVLPTTGLVTSFLKP 404
Query: 647 WC 648
C
Sbjct: 405 LC 406
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 106/235 (45%), Gaps = 6/235 (2%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
+ ++I G+ + ++E +D +K + P+ +Y A+I DF +S Y +L
Sbjct: 293 YSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRML 352
Query: 271 NQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
+++ PN+ ++ L++ + R ++ L I++ M + G+ P LK C G
Sbjct: 353 DEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH 412
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
A +Y++ + ++ Y ++K + M L V +M+ +G + +
Sbjct: 413 AAMVIYQKSRK----AGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVY 468
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+++ G +E A+ + EE + G PN ++ + + + + + A++ F
Sbjct: 469 EYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/366 (18%), Positives = 145/366 (39%), Gaps = 19/366 (5%)
Query: 246 YRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQ 303
Y I+ A G F + + ++ + + P++ M+ V + + +++ +
Sbjct: 154 YSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 304 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA 363
+ G+K S+N LL+ C V A+ ++ K G + D +Y+ +I ++
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-----GNIPFDSCSYNIMISGWSKL 268
Query: 364 KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 423
+ KV +M +G + +++S LI G + ++++F+ + G P+ +
Sbjct: 269 GEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVY 328
Query: 424 NIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQI 483
N ++ + A +D + R++ +ML E NL+ S + + + +
Sbjct: 329 NAMICNFISARDFDESMRYYR-----RML---DEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 484 LSFTERFP--FTPTTSTYNTLLKA-CGSDYYHAKALI-NEMKTVGLSPNQITWSILIDIC 539
F E PTT + LK C HA +I + + G ++ + +L+
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 440
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
+ + M ++G DV Y + + + A+ + EE PN
Sbjct: 441 SRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNR 500
Query: 600 VTYNTL 605
Y+ L
Sbjct: 501 FVYSRL 506
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 168/423 (39%), Gaps = 58/423 (13%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV-----NSRDLTYT 295
P+ Y + D DF+ + ++E+++ + FN+ V + L
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
++ Q G K D +YN L+ G A ++Y+ ++ +S+ LD TY
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSL----LDGSTYEL 318
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
II A + A K+ M+ + + +SSL+++ AG ++ +++++ EM G
Sbjct: 319 IIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFG 378
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG---EGYNSNLKQGSIHNAT 472
P+ F ++ + +A + D A R + K + +FG S+ K G + A
Sbjct: 379 HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAM 438
Query: 473 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITW 532
TV +M+ G P T+
Sbjct: 439 TV------------------------------------------FKDMEKAGFLPTPSTY 456
Query: 533 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
S L+++ G+ V+ A++I SM +AG++P + +Y + + + + A + EMK+
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Query: 593 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVI 652
+ + L+ Y V L + M +G K N++ + +L E + +
Sbjct: 517 MGYSVDVCASDVLM----IYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGL 572
Query: 653 QDN 655
D+
Sbjct: 573 YDS 575
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 227 ALEAYDALKKH---LDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNS 283
A E Y++++K LDG Y II + G + +++ + +K+ P+ VF+S
Sbjct: 297 AFEIYESMEKTDSLLDGST---YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSS 353
Query: 284 LMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
L++ + L ++ +Y MQ G +P T + L+ + AG++D A ++ E+K
Sbjct: 354 LVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK-- 411
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
+ + Y+ II+ A + ++A+ V DM AG +S L+ A +G V
Sbjct: 412 --SGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQV 469
Query: 402 EQAIQLFEEMLLAGCEPNTQCF 423
+ A++++ M AG P +
Sbjct: 470 DSAMKIYNSMTNAGLRPGLSSY 491
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 8/228 (3%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDL 269
+F ++I + K L +AL +D +KK PN +Y II++ G + +++D+
Sbjct: 385 MFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDM 444
Query: 270 LNQKITPNIYVFNSL--MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRV 327
P ++ L M+ S + + IY M N GL+P ++SY LL V
Sbjct: 445 EKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLV 504
Query: 328 DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA 387
D+A + E+K + +DV ++ DA + +ALK M S+G+ N
Sbjct: 505 DVAGKILLEMKAMG----YSVDVCASDVLMIYIKDASV-DLALKWLRFMGSSGIKTNNFI 559
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 435
L +C GL + A L E ++ + + + + IL V CQ
Sbjct: 560 IRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVR-CQ 606
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/232 (18%), Positives = 113/232 (48%), Gaps = 7/232 (3%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDL 269
+F +++ GK L ++++ Y ++ P+ ++ ++ID+ G + +++++
Sbjct: 350 VFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEM 409
Query: 270 LNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRV 327
PN ++ ++ +++ L + +++ M+ G P ++Y+ LL+ +G+V
Sbjct: 410 KKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQV 469
Query: 328 DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA 387
D A +Y + + L+ + +Y +++ + A+ +L +A K+ +M++ G +++ A
Sbjct: 470 DSAMKIYNSMTN----AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCA 525
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 439
L+ A V+ A++ M +G + N + +C++ YD A
Sbjct: 526 SDVLMIYIKDAS-VDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSA 576
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 159/389 (40%), Gaps = 53/389 (13%)
Query: 183 DMIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPN 242
DM +C + + R + +C+++ + +AL+ + + K +
Sbjct: 113 DMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV---- 168
Query: 243 MYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD---LTYTLNIY 299
+ + +I CG +++++L + P+ Y F+SLMN S D + Y ++
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+M G + + N +L G D D +EL+ +E + ++ ++++II
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRD---DAMRELESIEVLTQV-----SWNSIIDA 280
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
+ AL+V H N V W+++I G EQA++ F EM+ +G + +
Sbjct: 281 CMKIGETEKALEVFH----LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
Query: 420 TQCFNIILHAC-----------VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
+ +LHAC + C F+ + ++ GN ++ N K G I
Sbjct: 337 HFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY-AYVGNALV-------NLYAKCGDI 388
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLS 526
A +N ++S +NT+L A G +A L + M G+
Sbjct: 389 KEADRAFGDIANKDLVS-------------WNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSM 555
P+ +T+ L+ C + VE I +SM
Sbjct: 436 PDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 164/442 (37%), Gaps = 132/442 (29%)
Query: 308 KPDMTSYNILLKACCVAGRVDLAQ----------------------DMYKELKHLESVGR 345
KPD S+ +L C G V + DMY + S +
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 346 LKLDV-------FTYSTIIKVFADAKLWQMALKVKHDM--RSAGVNLNTVAWSSLINACA 396
+ D+ T+ +++ + +A+ ++ AL V +M R A AW+ +I+ A
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVA------FAWNIMISGHA 180
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
H G +E + LF+EML + +P+ F+ +++AC
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC-------------------------- 214
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNS-----QILSFTERFPFTP------------TTSTY 499
+SN+ G + +A + NG+S++ +LSF + T ++
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 500 NTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
N+++ AC KAL E+ + N +TW+ +I G + E A+ M +G
Sbjct: 275 NSIIDACMKIGETEKAL--EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG 332
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTY----NTLLKARSKYGS 614
+ D AY + C AL + +M C IH + Y N L+ +K G
Sbjct: 333 VDSDHFAYGAVLHACS-----GLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGD 387
Query: 615 VLE----------------------------VQQCLAIYQDMQKAGYKPNDYYL------ 640
+ E Q L +Y +M +G KP++
Sbjct: 388 IKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTT 447
Query: 641 ---EELIEEWC---EGVIQDNR 656
L+EE C E +++D R
Sbjct: 448 CSHSGLVEEGCMIFESMVKDYR 469
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 159/401 (39%), Gaps = 54/401 (13%)
Query: 246 YRAIIDACGLCGDFMKSRYIYEDLLNQKI-TPNIYVFNSLMNVNSRDLTYTLNIYQIMQN 304
Y A+I++ G F + +D+ +K+ + + S +R + + + M+
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEE 190
Query: 305 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 364
G K + + +N +L + V AQ ++ ++K R + D+ +Y+ +++ +
Sbjct: 191 FGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK----KRFEPDIKSYTILLEGWGQEL 246
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 424
+V +M+ G + VA+ +INA A E+AI+ F EM C+P+ F
Sbjct: 247 NLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFC 306
Query: 425 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 484
+++ + + A FF K +
Sbjct: 307 SLINGLGSEKKLNDALEFFERSKSSG---------------------------------- 332
Query: 485 SFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGT 542
FP TYN L+ A C S A ++EM+ G+ PN T+ I++
Sbjct: 333 -----FPL--EAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRM 385
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
+ + A E+ ++M +P V Y +++ + A+ +++EMK + P +
Sbjct: 386 QRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMF 442
Query: 603 NTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEEL 643
++L+ A ++ + + +M G +P + L
Sbjct: 443 SSLITALCHEN---KLDEACEYFNEMLDVGIRPPGHMFSRL 480
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/357 (18%), Positives = 140/357 (39%), Gaps = 54/357 (15%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
F I + + R + A+ A+ +++ + ++D + ++ +++ +
Sbjct: 165 FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK 224
Query: 271 NQKITPNIYVFNSLMNVNSRDLTYTLNIYQI---MQNLGLKPDMTSYNILLKACCVAGRV 327
++ P+I + L+ ++L L + ++ M++ G +PD+ +Y I++ A C A +
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNL-LRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 328 DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA 387
+ A + E++ K + ++I K AL+ +S+G L
Sbjct: 284 EEAIRFFNEMEQRNC----KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT 339
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 447
+++L+ A + +E A + +EM L G PN + ++IILH + + A+ + +
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT-- 397
Query: 448 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C 506
PT STY +++ C
Sbjct: 398 ------------------------------------------MSCEPTVSTYEIMVRMFC 415
Query: 507 GSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 562
+ A + +EMK G+ P +S LI ++ A E M D GI+P
Sbjct: 416 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 145/358 (40%), Gaps = 47/358 (13%)
Query: 116 VWTVIDTLKKVQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARFQLPI 175
+W+++D +K + L + + A RR + + EA+ + F +
Sbjct: 147 IWSLVDDMKAKKLL-----------SKETFALISRRYARARKVKEAIGAFHKMEEFGFKM 195
Query: 176 RELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHI-----LFCNIISEFGKRRDLISALEA 230
E + M+ SRN A + + + ++ +G+ +L+ E
Sbjct: 196 -ESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEV 254
Query: 231 YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--N 288
+K P++ Y II+A + ++ + ++ + P+ ++F SL+N +
Sbjct: 255 NREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 314
Query: 289 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK---------- 338
+ L L ++ ++ G + +YN L+ A C + R++ A E++
Sbjct: 315 EKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNART 374
Query: 339 ------HLESVGRLK------------LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 380
HL + R K V TY ++++F + + MA+K+ +M+ G
Sbjct: 375 YDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 434
Query: 381 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 438
V +SSLI A H +++A + F EML G P F+ + ++ + D+
Sbjct: 435 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDK 492
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 136/319 (42%), Gaps = 12/319 (3%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++ M GL+P + Y LL A R +L D + L ++S + + DVFTYST++
Sbjct: 146 LFDEMLEEGLEPTVELYTALLAAYT---RSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA-GC 416
K DA + + + +M + NTV + +++ G +Q ++ +ML++ C
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
+P+ NIIL + D ++ ++ G E N+ GS
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRN---FGIEPETRTFNILIGSYGKKRMYDK 319
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSI 534
S ++ + + F TTSTYN +++A D + + ++M++ G+ + T+
Sbjct: 320 ---MSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCC 376
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
LI+ I ++ I + Y I C ++ + + +Y MK +
Sbjct: 377 LINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQ 436
Query: 595 IHPNWVTYNTLLKARSKYG 613
+ T+ +++A K G
Sbjct: 437 CVCDSRTFEIMVEAYEKEG 455
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 492 FTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
+ P TY LL G A+ L +EM GL P ++ L+ + ++ A
Sbjct: 120 YQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAF 179
Query: 550 EILKSMGD-AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
IL M +PDV Y+T +K CV++ F +LY+EM I PN VT N +L
Sbjct: 180 SILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVL-- 237
Query: 609 RSKYGSVLEVQQCLAIYQDM 628
S YG V Q + DM
Sbjct: 238 -SGYGRVGRFDQMEKVLSDM 256
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 48/234 (20%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR---------- 290
P+++ Y ++ AC F +Y+++ + ITPN N +++ R
Sbjct: 193 PDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKV 252
Query: 291 --DL---------TYTLNI-----------------YQIMQNLGLKPDMTSYNILLKACC 322
D+ +T+NI Y+ +N G++P+ ++NIL+ +
Sbjct: 253 LSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYG 312
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA---DAKLWQMALKVKHDMRSA 379
D + + ++ LE TY+ II+ FA DAK ++ MRS
Sbjct: 313 KKRMYDKMSSVMEYMRKLE----FPWTTSTYNNIIEAFADVGDAKNMELTF---DQMRSE 365
Query: 380 GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 433
G+ +T + LIN A+AGL + I + NT +N ++ AC +A
Sbjct: 366 GMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKA 419
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 49/266 (18%)
Query: 354 STIIKVFAD---AKLWQMALKVKHDMRSAGV-NLNTVAWSSLINACAHAGLVEQAIQLFE 409
+T+ + +D K W AL+V +R + L+ +G +A +LF+
Sbjct: 89 NTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFD 148
Query: 410 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 469
EML G EP + + +L A Y R SNL
Sbjct: 149 EMLEEGLEPTVELYTALLAA------YTR----------------------SNL------ 174
Query: 470 NATTVPNGFSNSQILSFTERFP-FTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLS 526
+ + FS IL + FP P TY+TLLKAC S + +L EM ++
Sbjct: 175 ----IDDAFS---ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLIT 227
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
PN +T +I++ G + ++L M KPDV + V +
Sbjct: 228 PNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMES 287
Query: 586 LYEEMKSCEIHPNWVTYNTLLKARSK 611
YE+ ++ I P T+N L+ + K
Sbjct: 288 WYEKFRNFGIEPETRTFNILIGSYGK 313
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 160/371 (43%), Gaps = 63/371 (16%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQI 301
N Y + +++ AC F ++ I+ + ++Y NSL +NS +T + +
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSL--INSYAVTGNFKLAHL 171
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
+ + +PD S+N ++K AG++D+A +++++ ++ +++T+I +
Sbjct: 172 LFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI--------SWTTMISGYV 223
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
A + + AL++ H+M+++ V + V+ ++ ++ACA G +EQ + + ++
Sbjct: 224 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 283
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
+++ + + + A F N+K+ S+ T + +G++
Sbjct: 284 LGCVLIDMYAKCGEMEEALEVF-----------------KNIKKKSVQAWTALISGYAY- 325
Query: 482 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALIN---EMKTVGLSPNQITWSILIDI 538
+ H + I+ EM+ +G+ PN IT++ ++
Sbjct: 326 ----------------------------HGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 539 CGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
C T VE I SM D +KP + Y + + + +A +EM + P
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP---LKP 414
Query: 598 NWVTYNTLLKA 608
N V + LLKA
Sbjct: 415 NAVIWGALLKA 425
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 24/215 (11%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L ++ MQN ++PD S L AC G ++ + ++ L R+++D
Sbjct: 232 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT----RIRMDSVLGCV 287
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
+I ++A + AL+V +++ V AW++LI+ A+ G +AI F EM G
Sbjct: 288 LIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMG 343
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
+PN F +L AC + F+S + + NLK +I + +
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSME-----------RDYNLKP-TIEHYGCIV 391
Query: 476 NGFSNSQILSFTERF----PFTPTTSTYNTLLKAC 506
+ + +L +RF P P + LLKAC
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 147/356 (41%), Gaps = 49/356 (13%)
Query: 308 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 367
+PD +N++++ + + + +Y+ + + +T+ +++K ++ ++
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRM----LCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 368 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 427
++ + G + A +SLIN+ A G + A LF+ + EP+ +N ++
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVI 188
Query: 428 HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS------ 481
V+A + D A F + + + + TT+ +G+ +
Sbjct: 189 KGYVKAGKMDIALTLFR-----------------KMAEKNAISWTTMISGYVQADMNKEA 231
Query: 482 -QILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDI 538
Q+ + P + L AC K + + + + + + +LID+
Sbjct: 232 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDM 291
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 598
+E A+E+ K++ K V A+T I + ++A++ + EM+ I PN
Sbjct: 292 YAKCGEMEEALEVFKNIK----KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347
Query: 599 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQD 654
+T+ +L A S G V E + I+ M++ DY L+ IE + G I D
Sbjct: 348 VITFTAVLTACSYTGLVEEGK---LIFYSMER------DYNLKPTIEHY--GCIVD 392
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 171/392 (43%), Gaps = 29/392 (7%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
+Y + I PN Y FN L NV N + + + M+ G +PD+ +YN L+ + C
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
GR+ A +YK + R+ D+ TY+++IK + A + H M G+
Sbjct: 283 RRGRLKEAFYLYKIMYR----RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ +++++LI A G+++Q+ +L EML P+ +I+ V + A F
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF 398
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS-FTERFPFTPTTSTYNT 501
+ K+ F + I + F+ +L E TYN
Sbjct: 399 VVELRRLKVDIPF------EVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNN 452
Query: 502 LLKACGSDYYHAKALINEMKTVGLSPNQI----TWSILID-ICGGTENVEGAIEILKSMG 556
L+++ +AL+ +K + NQ+ T+ LI +C N E A ++ M
Sbjct: 453 LIESLSRCDAIEEALV--LKGKLKNQNQVLDAKTYRALIGCLCRIGRNRE-AESLMAEMF 509
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQA---LTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
D+ +KPD + + +F +A L+L+ M+ P +YN+L+KA + G
Sbjct: 510 DSEVKPDSFICGALVYGYCKELDFDKAERLLSLF-AMEFRIFDPE--SYNSLVKAVCETG 566
Query: 614 SVLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
++ L + + MQ+ G+ PN + LI+
Sbjct: 567 C--GYKKALELQERMQRLGFVPNRLTCKYLIQ 596
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 520 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
M VG+ PN T++IL ++ N + L+ M + G +PD++ Y T +
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYY 639
K+A LY+ M + P+ VTY +L+K K G V E Q + M G KP+
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ---TFHRMVDRGIKPDCMS 343
Query: 640 LEELIEEWC-EGVIQDNRE 657
LI +C EG++Q +++
Sbjct: 344 YNTLIYAYCKEGMMQQSKK 362
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 9/177 (5%)
Query: 482 QILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDIC 539
Q+ S R P T T+N L C S++ + +M+ G P+ +T++ L+
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
++ A + K M + PD++ YT+ IK + ++A + M I P+
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 600 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNR 656
++YNTL+ A K G +QQ + +M P+ + + ++ EG +++ R
Sbjct: 342 MSYNTLIYAYCKEGM---MQQSKKLLHEMLGNSVVPDRFTCKVIV----EGFVREGR 391
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 126/330 (38%), Gaps = 59/330 (17%)
Query: 304 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF------------ 351
+LG +P++ +Y +LL + + LA EL L S + ++DVF
Sbjct: 106 DLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTS-KKEEVDVFRVLVSATDECNW 164
Query: 352 ---TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
+ ++K + L + +V ++ +G +++ V + L+N L+E Q++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
M G PNT FNI+ + C +SN ++
Sbjct: 225 SVMCRVGIHPNTYTFNILTNV---FCN------------------------DSNFREV-- 255
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLS 526
L E F P TYNTL+ + C A L M +
Sbjct: 256 ------------DDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVV 303
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
P+ +T++ LI V A + M D GIKPD ++Y T I + +Q+ L
Sbjct: 304 PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKL 363
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVL 616
EM + P+ T +++ + G +L
Sbjct: 364 LHEMLGNSVVPDRFTCKVIVEGFVREGRLL 393
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 33/360 (9%)
Query: 212 CNII-SEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
CNII + + K DL A ++ +K D + + ++ID GD ++ +++ L
Sbjct: 371 CNIIINRYLKNGDLERAETLFERVKSLHDKVS---WTSMIDGYLEAGDVSRAFGLFQKLH 427
Query: 271 NQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
++ + + L V + ++ M GLKP ++Y++LL + +D
Sbjct: 428 DKDGVTWTVMISGL--VQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+ ++ + ++ D+ ++++ ++A A++ +++ + V +TV+W+S
Sbjct: 486 KHIHCVIA--KTTACYDPDLILQNSLVSMYAKCG----AIEDAYEIFAKMVQKDTVSWNS 539
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
+I +H GL ++A+ LF+EML +G +PN+ F +L AC + R F + K
Sbjct: 540 MIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK--- 596
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF----PFTPTTSTYNTLLKAC 506
E Y+ Q I + ++ + + L E F PFTP + Y LL C
Sbjct: 597 ------ETYSI---QPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLC 647
Query: 507 GSDYYHAKAL-INE---MKTVGLSP-NQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
G ++ A I E M+ + L P N L ++ G + E+ K MG G+K
Sbjct: 648 GLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVK 707
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Query: 489 RFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVE 546
R+ PTT TYN+++ C D AK +++ M + G SP+ +T+S LI+ + V+
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
+EI M GI + + YTT I + + A L EM SC + P+++T++ +L
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEE 642
S E+++ AI +D+QK+ D++LE+
Sbjct: 123 AGLC---SKKELRKAFAILEDLQKS----EDHHLED 151
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
P +YN ++ C RVD A+ M L + S G DV T+ST+I + AK
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRM---LDSMASKG-CSPDVVTFSTLINGYCKAKRVDN 63
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
+++ +M G+ NTV +++LI+ G ++ A L EM+ G P+ F+ +L
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 429 ACVEACQYDRAF 440
+ +AF
Sbjct: 124 GLCSKKELRKAF 135
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 161/371 (43%), Gaps = 24/371 (6%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L +++ M+ G + D T+YNI++++ C+AGR DLA + YKE+ + + TY
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMME----KGITFGLRTYKM 299
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
++ A ++ + + DM A+ L+ + +G +++A++L E+
Sbjct: 300 LLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKE 359
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS--FGEGYNSNLKQGSIHNATT 473
+ + F I++ A + A K K+ S +G + L+Q + A
Sbjct: 360 MCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKA-- 417
Query: 474 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQIT 531
+++ + R P STY +++ K L NEM G+ P+ +
Sbjct: 418 ----LEQFEVIKKSGR---PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+ ++ G V A ++ SM + GIKP +Y+ +K S + + + ++ +M
Sbjct: 471 ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMH 530
Query: 592 SCEIHPNWVTYNTLLKARSKYGS------VLEVQQCLAIYQDMQKAGYKPNDYYLEELIE 645
+ +I ++ ++ + K G + E+Q+ Y D K EEL++
Sbjct: 531 ASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVD 590
Query: 646 EW-CEGVIQDN 655
++ C ++Q +
Sbjct: 591 DYNCPQLVQQS 601
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 4/139 (2%)
Query: 488 ERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 545
+R + + YN +K CG D+ ++L EM+ G Q TW+I+I G T
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLT 729
Query: 546 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK--NFKQALTLYEEMKSCEIHPNWVTYN 603
AI K M D G+ P + I V E K N ++A + EM P+
Sbjct: 730 NIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQ 789
Query: 604 TLLKARSKYGSVLEVQQCL 622
L + G+ + + CL
Sbjct: 790 DYLGCLCEVGNTKDAKSCL 808
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 116/274 (42%), Gaps = 35/274 (12%)
Query: 101 ELLAKLVVLGIRGRNVWTVIDTLKK------VQGLEISLSAHLNASAMDVIAAECRRMVM 154
E++ K + G+R + ++D + K VQ + + S D + +
Sbjct: 284 EMMEKGITFGLRTYKM--LLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCV 341
Query: 155 SGHIAEAVELMEVLAR---------FQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLP 205
SG I EA+EL+ L F++ ++ L + + M+ A+ ++
Sbjct: 342 SGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD----------ALEIVDIMK 391
Query: 206 HAHILFCN----IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMK 261
+ N IIS + ++ D+ ALE ++ +KK P + Y I+ F K
Sbjct: 392 RRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEK 451
Query: 262 SRYIYEDLLNQKITPNIYVFNSLM--NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLK 319
++ +++ I P+ +++ ++ + ++ M+ G+KP SY+I +K
Sbjct: 452 GCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVK 511
Query: 320 ACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 353
C + R D ++ ++ + V ++ D+F++
Sbjct: 512 ELCRSSRYDEIIKIFNQMHASKIV--IRDDIFSW 543
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 55/327 (16%)
Query: 314 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVK 373
YN LL + G V+ + +Y E+ LE + + D++T++T++ + A +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEM--LEDL--VSPDIYTFNTLVNGYCKLGYVVEAKQYV 178
Query: 374 HDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 433
+ AG + + ++S I V+ A ++F+EM GC N + +++ EA
Sbjct: 179 TWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEA 238
Query: 434 CQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 493
+ D A K +
Sbjct: 239 KKIDEALSLLVKMKDDNC-----------------------------------------C 257
Query: 494 PTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILI-DICGGTENVEGAIE 550
P TY L+ A CGS A L +M G+ P+ +++LI C G + ++ A
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSG-DTLDEASG 316
Query: 551 ILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
+L+ M + G+ P+VI Y IK C KN +A+ L +M + P+ +TYNTL+ +
Sbjct: 317 LLEHMLENGLMPNVITYNALIKGFC--KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPN 636
G++ + L++ M+++G PN
Sbjct: 375 CSSGNLDSAYRLLSL---MEESGLVPN 398
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 50/305 (16%)
Query: 263 RYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNL---GLKPDMTSYNILLK 319
+ +Y ++L ++P+IY FN+L+N + L Y + Q + L G PD +Y +
Sbjct: 140 KRLYTEMLEDLVSPDIYTFNTLVNGYCK-LGYVVEAKQYVTWLIQAGCDPDYFTYTSFIT 198
Query: 320 ACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSA 379
C VD A ++KE+ + +Y+ +I +AK AL + M+
Sbjct: 199 GHCRRKEVDAAFKVFKEMTQ----NGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDD 254
Query: 380 GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 439
N ++ LI+A +G +A+ LF++M +G +P+ + +++ + D A
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 440 FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTY 499
S L + + N P TY
Sbjct: 315 ---------------------SGLLEHMLENG--------------------LMPNVITY 333
Query: 500 NTLLKA-CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 558
N L+K C + + A L+++M L P+ IT++ LI + N++ A +L M ++
Sbjct: 334 NALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEES 393
Query: 559 GIKPD 563
G+ P+
Sbjct: 394 GLVPN 398
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 131/334 (39%), Gaps = 54/334 (16%)
Query: 273 KITPNIYVFNSLMNVNSR-DLTYTLN-IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
K+TP Y N+L++ +R L + +Y M + PD+ ++N L+ C G V A
Sbjct: 117 KLTPKCY--NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEA 174
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+ L D FTY++ I K A KV +M G + N V+++
Sbjct: 175 KQYVTWLIQ----AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQ 230
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
LI A +++A+ L +M C PN + + +++ A + Q A F
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLF------- 283
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSD 509
KQ S S I P Y L+++ C D
Sbjct: 284 -------------KQ------------MSESGI---------KPDDCMYTVLIQSFCSGD 309
Query: 510 YY-HAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
A L+ M GL PN IT++ LI C +NV A+ +L M + + PD+I Y
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGFC--KKNVHKAMGLLSKMLEQNLVPDLITY 367
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
T I S N A L M+ + PN T
Sbjct: 368 NTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 42/298 (14%)
Query: 316 ILLKACCVAGRVDLAQDMYKELKHLESVG-RLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
+++K+C D + ++ +S + KL Y+ ++ A L + ++
Sbjct: 85 LMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYT 144
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
+M V+ + +++L+N G V +A Q ++ AGC+P+ + +
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 435 QYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 494
+ D AF+ F + Q H N S +Q++
Sbjct: 205 EVDAAFKVFKE-----------------MTQNGCHR-----NEVSYTQLIY--------- 233
Query: 495 TTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILK 553
L +A D A +L+ +MK PN T+++LID +CG + E A+ + K
Sbjct: 234 ------GLFEAKKID--EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE-AMNLFK 284
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 611
M ++GIKPD YT I+ +A L E M + PN +TYN L+K K
Sbjct: 285 QMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
Query: 493 TPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 550
+P T+NTL+ C Y AK + + G P+ T++ I + V+ A +
Sbjct: 152 SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFK 211
Query: 551 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 610
+ K M G + ++YT I E+K +AL+L +MK PN TY L+ A
Sbjct: 212 VFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC 271
Query: 611 KYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQD 654
G + + + +++ M ++G KP+D LI+ +C G D
Sbjct: 272 GSG---QKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLD 312
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 150/368 (40%), Gaps = 66/368 (17%)
Query: 164 LMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAH----------ILFCN 213
+++ + F LP+ V S +K C + P L HAH + C
Sbjct: 35 FLQMHSSFALPLDAHVF-SLALKSCAAAFRPVLGGSV-----HAHSVKSNFLSNPFVGCA 88
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
++ +GK + A + +D + + N ++ A+I CG ++ +YE +
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQR----NAVVWNAMISHYTHCGKVKEAVELYEAM---D 141
Query: 274 ITPNIYVFNSLMN--VNSRDLTY-TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
+ PN FN+++ V + D +Y + Y+ M KP++ + L+ AC G L
Sbjct: 142 VMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI 201
Query: 331 QDM--YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
+++ Y +E +LK S +++ + V M + + VAW
Sbjct: 202 KEIHSYAFRNLIEPHPQLK------SGLVEAYGRCGSIVYVQLVFDSME----DRDVVAW 251
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
SSLI+A A G E A++ F+EM LA P+ F +L AC A D A +F
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF----- 306
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF----------PFTPTTST 498
+M G +G L+ H + V +LS RF P PT T
Sbjct: 307 KRMQGDYG------LRASKDHYSCLV-------DVLSRVGRFEEAYKVIQAMPEKPTAKT 353
Query: 499 YNTLLKAC 506
+ LL AC
Sbjct: 354 WGALLGAC 361
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 133/306 (43%), Gaps = 35/306 (11%)
Query: 295 TLNIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL-DVFT 352
LN++ Q+ + L D +++ LK+C A R L + H SV L + F
Sbjct: 31 ALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV-----HAHSVKSNFLSNPFV 85
Query: 353 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
++ ++ A K+ ++ N V W+++I+ H G V++A++L+E M
Sbjct: 86 GCALLDMYGKCLSVSHARKLFDEIP----QRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 413 LAGCEPNTQCFNIILHACV--EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL-KQGSIH 469
+ PN FN I+ V E Y RA F+ KM+ F + NL ++
Sbjct: 142 VM---PNESSFNAIIKGLVGTEDGSY-RAIEFY-----RKMI-EFR--FKPNLITLLALV 189
Query: 470 NATTVPNGFS-NSQILSFTERFPFTPTTSTYNTLLKA---CGSDYYHAKALINEMKTVGL 525
+A + F +I S+ R P + L++A CGS Y + + + M+
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVY-VQLVFDSME---- 244
Query: 526 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
+ + WS LI + E A++ + M A + PD IA+ +K C + +AL
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 586 LYEEMK 591
++ M+
Sbjct: 305 YFKRMQ 310
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 169/394 (42%), Gaps = 41/394 (10%)
Query: 230 AYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNS 289
AYD ++ PN+Y+Y A+ID G +Y +++ + P+ YV S++ +
Sbjct: 80 AYDVFS-YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVL--KA 136
Query: 290 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 349
DL I+ + LG + +++ +G + A+ M+ E+ + V
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVA----- 191
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 409
+ +I +++ + AL++ D++ +TV W+++I+ + +A++LF
Sbjct: 192 ---ATVMINCYSECGFIKEALELFQDVKIK----DTVCWTAMIDGLVRNKEMNKALELFR 244
Query: 410 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM--LGSFGEGYNSNL--KQ 465
EM + N +L AC + + R+ HS+ N+ L +F N+ +
Sbjct: 245 EMQMENVSANEFTAVCVLSACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRC 303
Query: 466 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV-- 523
G I+ A V + ++S YNT++ +A INE + +
Sbjct: 304 GDINEARRVFRVMRDKDVIS-------------YNTMISGLAMHGASVEA-INEFRDMVN 349
Query: 524 -GLSPNQITWSILIDICGGTENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFK 581
G PNQ+T L++ C ++ +E+ SM ++P + Y + + +
Sbjct: 350 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLE 409
Query: 582 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
+A Y +++ I P+ + TLL A +G++
Sbjct: 410 EA---YRFIENIPIEPDHIMLGTLLSACKIHGNM 440
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/351 (18%), Positives = 128/351 (36%), Gaps = 97/351 (27%)
Query: 220 KRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIY 279
+ +++ ALE + ++ N + ++ AC G R+++ + NQ++ + +
Sbjct: 232 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF 291
Query: 280 VFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL 337
V N+L+N+ SR D+ ++++M++
Sbjct: 292 VGNALINMYSRCGDINEARRVFRVMRDK-------------------------------- 319
Query: 338 KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAH 397
DV +Y+T+I A A+ DM + G N V +L+NAC+H
Sbjct: 320 -----------DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSH 368
Query: 398 AGLVEQAIQLFEEM-LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
GL++ +++F M + EP + + I+ + + A+RF
Sbjct: 369 GGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFI------------- 415
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL 516
E P P TLL AC H
Sbjct: 416 -------------------------------ENIPIEPDHIMLGTLLSACK---IHGNME 441
Query: 517 INEMKTVGL----SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
+ E L +P+ T+ +L ++ + + + EI +SM D+GI+ +
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 492
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 157/369 (42%), Gaps = 21/369 (5%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
+Y+++ + N+ FN ++ ++ L L+++ M G+ P++ S+N+++ C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
G + A + ++ + S + + TY+++I F A +A +++ DM +GV+
Sbjct: 265 KTGDMRFALQLLGKMGMM-SGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
N + +L++A AG ++A++L +EM G NT +N I++ + A
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 443 FHSWKGNKM-LGSFGEG--YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTY 499
M + F + + G + A S +++ +
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLV---------EDIVCH 434
Query: 500 NTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD 557
NTL+ D A A ++ M GLS + I++ LID +E A+EI M
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 558 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
+++ Y + + + A + M+ +I VTYNTLL K G+V E
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEE 550
Query: 618 VQQCLAIYQ 626
L+ Q
Sbjct: 551 ADDILSKMQ 559
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 167/400 (41%), Gaps = 70/400 (17%)
Query: 265 IYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGL------KPDMTSYNI 316
++ +L + PN+ FN +++ + D+ + L Q++ +G+ P+ +YN
Sbjct: 240 VFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFAL---QLLGKMGMMSGNFVSPNAVTYNS 296
Query: 317 LLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM 376
++ C AGR+DLA+ + ++ + + TY ++ + A AL++ +M
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVK----SGVDCNERTYGALVDAYGRAGSSDEALRLCDEM 352
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN--TQ-------CFNIIL 427
S G+ +NTV ++S++ G +E A+ + +M + + TQ C N +
Sbjct: 353 TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYV 412
Query: 428 HACVE--------------ACQYDRAFRFFHSWK---GNKMLGS------------FGEG 458
VE C F K +++LGS FG
Sbjct: 413 KEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTL 472
Query: 459 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH--AKAL 516
+ LK+G + A + +G + T YN+++ A+A+
Sbjct: 473 IDGYLKEGKLERALEIYDGMI---------KMNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523
Query: 517 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG--DAGIKPDVIAYTTAIKVC 574
+N M+ + +T++ L++ T NVE A +IL M D ++ + I
Sbjct: 524 VNAMEI----KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHL 579
Query: 575 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
+ ++++A + + M + P+ +TY TL+ + SK+ S
Sbjct: 580 CKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRS 619
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 33/317 (10%)
Query: 303 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 362
Q G PD+ ++ L++AC G AQ Y+ ++ + G + V + + +
Sbjct: 142 QACGSSPDV--FDSLVRACTQNGD---AQGAYEVIEQTRAEG-FCVSVHALNNFMGCLLN 195
Query: 363 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
KV +M S G N ++ +I + C + L E A+ +F ML G PN
Sbjct: 196 VNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFE-ALSVFYRMLKCGVWPNVV 254
Query: 422 CFNIILHACVEACQY-DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN 480
FN+++ AC+ D F ++LG G + N + +V NGF
Sbjct: 255 SFNMMIDG---ACKTGDMRFAL-------QLLGKMGM-MSGNFVSPNAVTYNSVINGFCK 303
Query: 481 SQILSFTERFPFTPTTS-------TYNTLLKACG----SDYYHAKALINEMKTVGLSPNQ 529
+ L ER S TY L+ A G SD A L +EM + GL N
Sbjct: 304 AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSD--EALRLCDEMTSKGLVVNT 361
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
+ ++ ++ ++EGA+ +L+ M ++ D ++ + K+A+ +
Sbjct: 362 VIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQ 421
Query: 590 MKSCEIHPNWVTYNTLL 606
+ ++ + V +NTL+
Sbjct: 422 ISEKKLVEDIVCHNTLM 438
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 185/462 (40%), Gaps = 74/462 (16%)
Query: 257 GDFMKSRYIYEDLLNQKITPNIY------------------------------------V 280
G+ + ++Y+ +++ +++P+++
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 281 FNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK 338
+NSL+N + D+ + ++M G+ ++ +Y L+K C G ++ A+ +++ LK
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 339 HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
+L D Y ++ + + A++V +M GV NT +SLIN +
Sbjct: 324 E----KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 399 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 458
G + +A Q+F M +P+ +N ++ A D A + +++ +
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT- 438
Query: 459 YNSNLKQ----GSIHNATT-----VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG-- 507
YN LK G+ H+ + + G + +I + +TLL+A
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI--------------SCSTLLEALFKL 484
Query: 508 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
D+ A L + GL + IT +++I E V A EIL ++ KP V Y
Sbjct: 485 GDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTY 544
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
+ N K+A + E M+ I P YNTL+ KY + +V + +
Sbjct: 545 QALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI---E 601
Query: 628 MQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQAEFSSIKKS 668
++ G P LI WC G+I ++ Y F I+K
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMI--DKAYATCFEMIEKG 641
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/530 (19%), Positives = 200/530 (37%), Gaps = 95/530 (17%)
Query: 212 CN-IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
CN +I+ + K L+ A + + + P+ + Y ++D G ++ + + +
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 271 NQKITPNIYVFNSLMNVNSR-------------------------------------DLT 293
+++ P + +N L+ SR D
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 294 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM---------------YKELK 338
+ +++ + GL D + N+++ C +V+ A+++ Y+ L
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS 548
Query: 339 H-LESVGRLK--LDVFTYSTIIKVFADAKLWQM----ALKVKH---------DMRSAGVN 382
H VG LK V Y +F +++ A K +H ++R+ G+
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ +LI + G++++A EM+ G N + I ++ + D A
Sbjct: 609 PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLL 668
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATT------VPNGFSNSQILSFTERFPFTPTT 496
+L GY S LK+ +ATT + NS T + P
Sbjct: 669 LQKIVDFDLLLP---GYQS-LKEFLEASATTCLKTQKIAESVENS-----TPKKLLVPNN 719
Query: 497 STYNTLLKA-CGSDYYH-AKALINEMKTVG-LSPNQITWSILIDICGGTENVEGAIEILK 553
YN + C + A+ L +++ + P++ T++ILI C ++ A +
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 779
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
M GI P+++ Y IK + N +A L ++ I PN +TYNTL+ K G
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 614 SVLE--------VQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDN 655
+V E +++ L D Q P + L+ ++ GVI+ N
Sbjct: 840 NVAEAMRLKEKMIEKGLVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMN 889
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 159/379 (41%), Gaps = 36/379 (9%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G K ++Y LL++C +G + L + ++ + DVF + ++ ++A
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFT-----EPDVFVETKLLSMYAKCGC 130
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
A KV MR N WS++I A + + +LF M+ G P+ F
Sbjct: 131 IADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPK 186
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNS 481
IL C C A + HS + S NS L K G + AT
Sbjct: 187 ILQGCAN-CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER 245
Query: 482 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDIC 539
+++ +N++L A + H +A L+ EM+ G+SP +TW+ILI
Sbjct: 246 DVIA-------------WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 540 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 599
+ A+++++ M GI DV +T I + + QAL ++ +M + PN
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 600 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQDNREY 658
V T++ A S + + Q ++ K G+ + L++ + + G ++D R+
Sbjct: 353 V---TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 659 QAEFSSIKKSELERPQSLL 677
F S+K ++ S++
Sbjct: 410 ---FDSVKNKDVYTWNSMI 425
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/514 (19%), Positives = 211/514 (41%), Gaps = 51/514 (9%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNI 298
P++++ ++ CG +R +++ + + N++ +++++ SR+ + +
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKL 168
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+++M G+ PD + +L+ C G V+ + ++ + L L++ ++I+
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVS----NSILA 224
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
V+A A K MR V +AW+S++ A G E+A++L +EM G P
Sbjct: 225 VYAKCGELDFATKFFRRMRERDV----IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP 280
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+NI++ + + D A + +FG +++ + + + NG
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQK------METFG--ITADVFTWTAMISGLIHNGM 332
Query: 479 SNSQILSFTERF--PFTPTTSTYNTLLKAC--------GSDYYHAKALINEMKTVGLSPN 528
+ F + F P T + + AC GS+ H+ A+ +G +
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAV-----KMGFIDD 386
Query: 529 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 588
+ + L+D+ +E A ++ S+ + DV + + I ++ +A L+
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 589 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
M+ + PN +T+NT++ K G E + ++Q M+K G + LI
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEA---MDLFQRMEKDGKVQRNTATWNLI---I 496
Query: 649 EGVIQDNREYQAEFSSIKKSELER--PQSLLLEKIAAHLLKRVADILAIDVQGLTKVEAR 706
G IQ+ ++ +A +K + R P S+ + + + + ++ G
Sbjct: 497 AGYIQNGKKDEA-LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 707 LVILAVLRMIKENYAFGHSVNDDILIIIGATKAD 740
I AV + + YA + I +G D
Sbjct: 556 DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 156/381 (40%), Gaps = 46/381 (12%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNI 298
PN + + AC + ++ + ++ V NSL+++ S+ L +
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ ++N D+ ++N ++ C AG A +++ ++ L+ ++ T++T+I
Sbjct: 410 FDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQD----ANLRPNIITWNTMIS 461
Query: 359 VFADAKLWQMALKVKHDMRSAG-VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
+ A+ + M G V NT W+ +I G ++A++LF +M +
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM 521
Query: 418 PNTQCFNIILHAC-----------VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 466
PN+ +L AC + C R H+ K N + ++ K G
Sbjct: 522 PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK-NALTDTYA-------KSG 573
Query: 467 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVG 524
I + T+ G I+ T+N+L+ Y A AL N+MKT G
Sbjct: 574 DIEYSRTIFLGMETKDII-------------TWNSLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 525 LSPNQITWSILIDICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQA 583
++PN+ T S +I G NV+ ++ S+ D I P + + + + + ++A
Sbjct: 621 ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEA 680
Query: 584 LTLYEEMKSCEIHPNWVTYNT 604
L +EM P W ++ T
Sbjct: 681 LQFIQEMNIQSETPIWESFLT 701
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 133/324 (41%), Gaps = 52/324 (16%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++ I +G D+ N L+ G+++ A+ ++ +K+ DV+T++++I
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK--------DVYTWNSMI 425
Query: 358 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG-C 416
+ A A ++ M+ A + N + W+++I+ G +A+ LF+ M G
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
+ NT +N+I+ ++ + D A F
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRK------------------------------- 514
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILI 536
+ F+ F P + T +LL AC ++ AK ++ E+ L N +
Sbjct: 515 -------MQFSR---FMPNSVTILSLLPAC-ANLLGAK-MVREIHGCVLRRNLDAIHAVK 562
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
+ T G IE +++ D+I + + I V ++ AL L+ +MK+ I
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 597 PNWVTYNTLLKARSKYGSVLEVQQ 620
PN T ++++ A G+V E ++
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKK 646
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 126/307 (41%), Gaps = 50/307 (16%)
Query: 320 ACCVAGRVDLAQ--DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 377
AC +A D D +++ E+ G+ + + + ++K + + AL + M+
Sbjct: 134 ACLLAKGNDFKGLWDFLRQVSRREN-GKNVVTTASITCLMKCLGEEGFVKEALATFYRMK 192
Query: 378 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE--PNTQCFNIILHACVEACQ 435
+ A++++INA G ++A L ++M L G P+T + I++ + C+
Sbjct: 193 EYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISS---YCR 249
Query: 436 YD------RAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 489
Y +A R W+ N+M + L +G
Sbjct: 250 YGMQTGCRKAIRR-RMWEANRM-------FREMLFRG----------------------- 278
Query: 490 FPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEG 547
F P TYN L+ C +AL +MKT G PNQ+T++ I T +EG
Sbjct: 279 --FVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 548 AIEILKSMGDAGIK-PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
AIE++++M G P YT I VE++ +A L EM + P TY +
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVC 396
Query: 607 KARSKYG 613
A S G
Sbjct: 397 DALSSEG 403
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE--DLLNQKITPNIYVFNSL 284
AL + +K++ P++Y Y II+A G+F K+R++ + L + P+ Y + L
Sbjct: 184 ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTIL 243
Query: 285 MNVN-------------SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
++ R + +++ M G PD+ +YN L+ CC R+ A
Sbjct: 244 ISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRAL 303
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL-NTVAWSS 390
++++++K V + TY++ I+ ++ + A+++ M+ G + + ++
Sbjct: 304 ELFEDMKTKGCVP----NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTP 359
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
LI+A +A L EM+ AG P + ++ A
Sbjct: 360 LIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 477 GFSNSQILSF--TERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGL--SPNQI 530
GF + +F + + P YNT++ A C ++ A+ L+++M+ G P+
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 531 TWSILID-IC--GGTENVEGAIE--------ILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
T++ILI C G AI + + M G PDV+ Y I C ++
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 633
+AL L+E+MK+ PN VTYN+ ++ Y E++ + + + M+K G+
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIRY---YSVTNEIEGAIEMMRTMKKLGH 349
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 148/347 (42%), Gaps = 21/347 (6%)
Query: 295 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 354
++ I+ + + G+K + S N LL R DL M+K K ES G + ++FT +
Sbjct: 139 SMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK--ESFG-ITPNIFTCN 195
Query: 355 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 414
++K + A KV ++ S G+ N V +++++ G +E A ++ EEML
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 415 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNA 471
G P+ + +++ + ++ A + N++ ++G + K+
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK---- 311
Query: 472 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQ 529
+G + + ER F P +S ++ A D+ A L +M P+
Sbjct: 312 ----SGEARNMFDEMLER-SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
S LI V A ++ I P ++ Y T I E +A L+++
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 590 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
M + PN TYN L++ SK G+ V++ + + ++M + G PN
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGN---VKEGVRVLEEMLEIGCFPN 469
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 535
F NS+ E F TP T N L+KA +D A +++E+ ++GL PN +T++ +
Sbjct: 178 FKNSK-----ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTI 232
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
+ ++E A +L+ M D G PD YT + + F +A T+ ++M+ EI
Sbjct: 233 LGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEI 292
Query: 596 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
PN VTY +++A K E + ++ +M + + P+ ++I+ CE
Sbjct: 293 EPNEVTYGVMIRALCKEKKSGEARN---MFDEMLERSFMPDSSLCCKVIDALCE 343
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 128/331 (38%), Gaps = 50/331 (15%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNI 298
PN++ ++ A D + + +++ + + PN+ + +++ V D+ +
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
+ M + G PD T+Y +L+ C GR A + +++ E ++ + TY +I+
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE----IEPNEVTYGVMIR 304
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
K A + +M ++ +I+A V++A L+ +ML C P
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ + ++H W K+G + A + + F
Sbjct: 365 DNALLSTLIH-----------------WL---------------CKEGRVTEARKLFDEF 392
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILI 536
I P+ TYNTL+ + A L ++M PN T+++LI
Sbjct: 393 EKGSI----------PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLI 442
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
+ NV+ + +L+ M + G P+ +
Sbjct: 443 EGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 11/207 (5%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFM--KSRYIYEDLLNQKITPNIYVFNSL 284
A D ++K+ PN Y +I A LC + ++R +++++L + P+ + +
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRA--LCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 285 MNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLES 342
++ D + +++ M PD + L+ C GRV A+ ++ E +
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK--- 394
Query: 343 VGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 402
G + + TY+T+I + A ++ DM N ++ LI + G V+
Sbjct: 395 -GSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452
Query: 403 QAIQLFEEMLLAGCEPNTQCFNIILHA 429
+ +++ EEML GC PN F I+
Sbjct: 453 EGVRVLEEMLEIGCFPNKTTFLILFEG 479
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 27/291 (9%)
Query: 338 KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CA 396
KH S L ++FTY +IKV+A+AKL + L + M + +++ +
Sbjct: 109 KHRSSGYPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVS 166
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML---- 452
H G +++A +LF+ L G PNT+ +N+++ A A++ F KML
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLF-----GKMLERDV 221
Query: 453 ----GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC-- 506
S+ ++G ++ A + + N F P +Y TLL +
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG---------FVPDRLSYTTLLNSLCR 272
Query: 507 GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
+ A L+ MK G +P+ + ++ +I + A ++L M G P+ ++
Sbjct: 273 KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
Y T I + F + EEM S P++ N L+K +G V E
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 112/292 (38%), Gaps = 48/292 (16%)
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
RS+G L ++ LI A A L E+ + F +ML P + N IL V Y
Sbjct: 111 RSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY 170
Query: 437 -DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 495
+AF F S + +H P
Sbjct: 171 LQKAFELFKSSR--------------------LHGVM---------------------PN 189
Query: 496 TSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 553
T +YN L++A D A L +M + P+ ++ ILI V GA+E+L
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
M + G PD ++YTT + ++A L MK +P+ V YNT++ +
Sbjct: 250 DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED 309
Query: 614 SVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC-EGVIQDNREYQAEFSS 664
++ ++ L DM G PN LI C +G+ + ++Y E S
Sbjct: 310 RAMDARKVL---DDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 224 LISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNS 283
L A E + + + H PN Y ++ A L D + ++ +L + + P++ +
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 284 LMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
L+ R + + + M N G PD SY LL + C R ++ YK L ++
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLC---RKTQLREAYKLLCRMK 287
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
G D+ Y+T+I F A KV DM S G + N+V++ +LI G+
Sbjct: 288 LKG-CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHA 429
++ + EEM+ G P+ N ++
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 274 ITPNIYVFNSLMNVN--SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
+ PN +N LM + DL+ ++ M + PD+ SY IL++ C G+V+ A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
++ ++ + V D +Y+T++ + A K+ M+ G N + V ++++
Sbjct: 246 ELLDDMLNKGFVP----DRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
I A ++ ++ML GC PN+ + ++ + +D ++
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 166/393 (42%), Gaps = 64/393 (16%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSR----DLTYTLNIYQIMQNLGLKPDMTSYNILLKA 320
+++ L + T ++ N+L++ +S+ DL + IY+ + + P+ + I+++
Sbjct: 186 VFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVW--RIYECAIDKRIYPNEITIRIMIQV 243
Query: 321 CCVAGRVDLAQDMYKEL---KHLESVGRLKLDVFTYSTIIKVFADAKLWQ-MALKVKHDM 376
C GR+ D+ + + L SV + S + +V + ++ + M+L + M
Sbjct: 244 LCKEGRLKEVVDLLDRICGKRCLPSV------IVNTSLVFRVLEEMRIEESMSLLKRLLM 297
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
++ V+ T+ +S ++ A A G + A ++F+EML G N+ + + + C E
Sbjct: 298 KNMVVD--TIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE---- 351
Query: 437 DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTT 496
+G + A ++LS E +P
Sbjct: 352 ----------------------------KGDVKEA---------ERLLSEMEESGVSPYD 374
Query: 497 STYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 554
T+N L+ + K L M T GL P+ ++ ++ ENV A EIL
Sbjct: 375 ETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTK 434
Query: 555 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
D G PD Y+ I+ +E + QAL L+ EM+ ++ P + + +L+ G
Sbjct: 435 SIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGK 494
Query: 615 VLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
V ++ L I M+K +PN + LI+ +
Sbjct: 495 VEAGEKYLKI---MKKRLIEPNADIYDALIKAF 524
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 16/218 (7%)
Query: 219 GKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNI 278
K DL+SA + +D + + N ++Y + C GD ++ + ++ ++P
Sbjct: 315 AKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD 374
Query: 279 YVFNSLMNVNSR------DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
FN L+ +R L Y ++M GL P +++N ++K+ V+ A +
Sbjct: 375 ETFNCLIGGFARFGWEEKGLEYC----EVMVTRGLMPSCSAFNEMVKSVSKIENVNRANE 430
Query: 333 MYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
+ +S+ + D TYS +I+ F + ALK+ ++M ++ + SL
Sbjct: 431 ILT-----KSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSL 485
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
I G VE + + M EPN ++ ++ A
Sbjct: 486 IVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 231 YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VN 288
+D LK+ PNM Y +++ + +++ I+ D+++Q + P+I N ++ +
Sbjct: 287 FDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR 345
Query: 289 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 348
SR + + ++ +M++ G P++ SY I+++ C ++ A + + ++ L+
Sbjct: 346 SRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD----SGLQP 401
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
D Y+ +I F K ++ +M+ G + +++LI A+ + E A +++
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIY 461
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYD 437
+M+ EP+ FN+I+ + A Y+
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFMARNYE 490
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 167/407 (41%), Gaps = 42/407 (10%)
Query: 272 QKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
Q + +NS+M++ +R +++ + M GL M ++ I +KA A
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A +++ +K + K+ V T + ++ AKL + A +V D N + ++
Sbjct: 248 AVGIFELMKKY----KFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYT 302
Query: 390 SLINA-CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
L+N C L+E A +++ +M+ G +P+ N++L + + + A + FH K
Sbjct: 303 VLLNGWCRVRNLIE-AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 449 N---KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
+ S+ KQ S+ A + +S + P + Y L+
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL---------QPDAAVYTCLITG 412
Query: 506 CGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
G+ L+ EM+ G P+ T++ LI + + E A I M I+P
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 623
+ + +K ++N++ ++EEM I P+ +Y L++ G E +
Sbjct: 473 IHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACR--- 529
Query: 624 IYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKKSEL 670
YLEE++++ + + D ++ A+F + E+
Sbjct: 530 ---------------YLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 141/346 (40%), Gaps = 44/346 (12%)
Query: 272 QKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
Q I P ++V ++ + + + M G +PD + LL A C G V A
Sbjct: 179 QLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
++++++ R +++ +++++ + A V M AG + V +++L
Sbjct: 239 KLFEDMRM-----RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNL 293
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
++ A+AG + A L +M G EPN C+ +++ A + + + A + F
Sbjct: 294 LSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM----- 348
Query: 452 LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY 511
E Y + + T + +GF + Y
Sbjct: 349 -----ERYEC---EADVVTYTALVSGFCK-----------WGKIDKCY------------ 377
Query: 512 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
++++M GL P+++T+ ++ E+ E +E+++ M PD+ Y I
Sbjct: 378 ---IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 617
++ + K+A+ L+ EM+ + P T+ ++ + G +LE
Sbjct: 435 RLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLE 480
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 133/316 (42%), Gaps = 34/316 (10%)
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNL-NTVAWSSLINACAHAGLVEQAIQLFEE 410
Y +++K+ + + + + +MR L + L+ A A +V++AI++ +E
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDE 208
Query: 411 MLLAGCEPNTQCFNIILHA-CVEACQYDRA-------------FRFFHS-WKGNKMLGSF 455
M G EP+ F +L A C D A R+F S G +G
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKM 268
Query: 456 GEG------YNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTPTTSTYNTL 502
E N + I + T + +G++N+ +L R F P + Y L
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 503 LKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
++A C D A + EM+ + +T++ L+ ++ +L M G+
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
P + Y + + ++F++ L L E+M+ E HP+ YN +++ K G EV++
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLG---EVKE 445
Query: 621 CLAIYQDMQKAGYKPN 636
+ ++ +M++ G P
Sbjct: 446 AVRLWNEMEENGLSPG 461
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/469 (18%), Positives = 175/469 (37%), Gaps = 86/469 (18%)
Query: 210 LFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDAC---------------- 253
LF ++ F + A+E D + K P+ Y++ ++DA
Sbjct: 185 LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM 244
Query: 254 ----------------GLC--GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLT 293
G C G M+++Y+ + P+I + +L++ N+ +
Sbjct: 245 RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 294 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 353
++ + M+ G +P+ Y +L++A C R++ A ++ E++ E + DV TY
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYEC----EADVVTY 360
Query: 354 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 413
+ ++ F V DM G+ + + + ++ A E+ ++L E+M
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
Query: 414 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT 473
P+ +N+++ + + A R ++ + N + +
Sbjct: 421 IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL-------------SPGVDTFVI 467
Query: 474 VPNGF-SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE-MKTVGLSPNQIT 531
+ NG S +L ++ F T ++ S Y K L+N +K L +
Sbjct: 468 MINGLASQGCLLEASDHFKEMVTRGLFSV------SQYGTLKLLLNTVLKDKKLEMAKDV 521
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
WS + +GA E+ +V+++T I K+A + EM
Sbjct: 522 WSCITS--------KGACEL-----------NVLSWTIWIHALFSKGYEKEACSYCIEMI 562
Query: 592 SCEIHPNWVTYNTLLKA------RSKYGSVLEVQQCLAIYQDMQKAGYK 634
+ P T+ L+K R G + E + +A ++M YK
Sbjct: 563 EMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMAAEREMSFKMYK 611
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 155/366 (42%), Gaps = 47/366 (12%)
Query: 256 CGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIYQIMQNLGLKPDMTS 313
CG ++R ++E + + + + +L++ S+ L + M G P+ +
Sbjct: 108 CGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 314 YNILLKACCVAGRVDLAQDMYK-----ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
+ ++KA R ++ VG LD++T ++ DA+L
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD---DAQLVFD 220
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 428
AL+ ++D V+W++LI A E+A++LF+ ML G P+ + +
Sbjct: 221 ALESRND----------VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 429 ACVEACQYDRAFRFFHSW---KGNKMLGSFGEGY-NSNLKQGSIHNATTVPNGFSNSQIL 484
AC ++ ++ H++ G K++ G + K GSIH+A + + + ++
Sbjct: 271 ACSSTGFLEQG-KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Query: 485 SFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGT 542
S +N+LL A + +A+ EM+ VG+ PN+I++ ++ C +
Sbjct: 330 S-------------WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Query: 543 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
++ + M GI P+ Y T + + + + +AL EEM I P +
Sbjct: 377 GLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIW 433
Query: 603 NTLLKA 608
LL A
Sbjct: 434 KALLNA 439
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 136/332 (40%), Gaps = 47/332 (14%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIY 299
++Y ++D L D ++SR N +N+L+ ++R L ++
Sbjct: 204 DLYTRYGLMDDAQLVFDALESR-------------NDVSWNALIAGHARRSGTEKALELF 250
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
Q M G +P SY L AC G ++ + ++ ++ G KL F +T++ +
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA---YMIKSGE-KLVAFAGNTLLDM 306
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 419
+A + A K+ + + V+W+SL+ A A G ++A+ FEEM G PN
Sbjct: 307 YAKSGSIHDARKIFDRL----AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 420 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP---N 476
F +L AC + D + ++ K + ++ + H T V
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE------------AWHYVTVVDLLGR 410
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDY-----YHAKALINEMKTVGLSPNQIT 531
++ L F E P PT + + LL AC +A + E+ P+ I
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVIL 470
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
++I GG N A + K M ++G+K +
Sbjct: 471 YNIYAS--GGRWN--DAARVRKKMKESGVKKE 498
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 154/382 (40%), Gaps = 80/382 (20%)
Query: 310 DMTSYNILLKACCV-----AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 364
D YN LLK C V GR+ A + +H D+ +T++ ++A
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRH---------DIVMGNTLLNMYAKCG 109
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 424
+ A KV M + V W++LI+ + A+ F +ML G PN
Sbjct: 110 SLEEARKVFEKM----PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN----E 161
Query: 425 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGE-GYNSNLKQGS---------------- 467
L + ++A +R G+++ G + G++SN+ GS
Sbjct: 162 FTLSSVIKAAAAER-----RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ 216
Query: 468 -IHNATTVPNGFSNSQIL------SFTE----------RFPFTPTTSTYNTLLKACGS-- 508
+ +A N S + ++ S TE R F P+ +Y +L AC S
Sbjct: 217 LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 509 -----DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
+ HA + + K V + N L+D+ + ++ A +I + K D
Sbjct: 277 FLEQGKWVHAYMIKSGEKLVAFAGN-----TLLDMYAKSGSIHDARKIFDRLA----KRD 327
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 623
V+++ + + + K+A+ +EEM+ I PN +++ ++L A S G + E
Sbjct: 328 VVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH--- 384
Query: 624 IYQDMQKAGYKPNDYYLEELIE 645
Y+ M+K G P ++ +++
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVD 406
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 60/397 (15%)
Query: 204 LPHAHIL-FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDAC--------- 253
+P +++ + +IS + K + ALE + + PN+Y Y +++ +C
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 254 -------GLCGD-FMKSRYI--------YEDLL---NQKITPNIYVFNSLMN---VNSRD 291
GL D F++S I ED L ++ +T + V+NS++ NSR
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 292 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 351
L +++ M+ G + + +L+AC ++L + + + D+
Sbjct: 242 -DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ------DLI 294
Query: 352 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 411
+ ++ ++ + AL+V + M+ V + WS++I+ A G ++A++LFE M
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDV----ITWSTMISGLAQNGYSQEALKLFERM 350
Query: 412 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGS 467
+G +PN +L AC A + + +F S K + E Y + K G
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 468 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSP 527
+ +A + N P T+ TLL AC A K + L P
Sbjct: 411 LDDAVKLLN------------EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 528 NQI-TWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
T+++L +I ++ + EI M D GIK +
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 16/321 (4%)
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
D+ KE+ ES G L L++ + +I +F + A V G N +
Sbjct: 215 DLVKEIGEKESCGVLNLEIL--NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLT 272
Query: 392 INACAHAGLVEQAIQLFEEMLLAGC-EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
+ A ++ A + E+ML +G Q NII C E + + A+ + K +
Sbjct: 273 LEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEG-KAEEAYSVYELAKTKE 331
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT---ERFPFTPTTSTYNTLLKACG 507
S + + L N T+ F+ + + R P + ++L +
Sbjct: 332 K--SLPPRFVATLITALCKNDGTIT--FAQEMLGDLSGEARRRGIKPFSDVIHSLCRM-- 385
Query: 508 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
+ AKAL+ +M + G +P +++++ C T +++ A E+LK M G+KPDV Y
Sbjct: 386 RNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTY 445
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
T I + +A + E K + VTY+ L++ Y + E + L + +
Sbjct: 446 TVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG---YCKIEEYDEALKLLNE 502
Query: 628 MQKAGYKPNDYYLEELIEEWC 648
M + G +PN +LI+ +C
Sbjct: 503 MDRFGVQPNADEYNKLIQSFC 523
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 213 NIISEFGKRRDLISALEAYDALK-KHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLN 271
NII+ F K A Y+ K K P ++ I C G ++ + DL
Sbjct: 306 NIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSG 365
Query: 272 QKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
+ I F+ +++ R++ + M + G P +N+++ AC G +D
Sbjct: 366 EARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDE 425
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A+++ LK +ES G LK DV+TY+ II +A + A ++ + + L+ V +
Sbjct: 426 AKEV---LKLMESRG-LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYH 481
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWK 447
+LI ++A++L EM G +PN +N ++ + C++A +++A F K
Sbjct: 482 ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMK 540
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 163/400 (40%), Gaps = 80/400 (20%)
Query: 248 AIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN-VNSRDLTYTLNIYQIMQNLG 306
A+ID CG+ SR ++ + ++ NI +N+L++ ++D L+++ M +G
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRDK----NIVCWNALLSGYANKDGPICLSLFLQMLQMG 411
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV-GRLKLDVFTY--STIIKVFADA 363
+P +++ LK+CCV EL+ L SV R+ + Y S++++ +A
Sbjct: 412 FRPTEYTFSTALKSCCVT-----------ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKN 460
Query: 364 KLWQMALKV---------------------KHDMRSAGVNL-------NTVAWSSLINAC 395
+L AL + + V L +TV+W+ I AC
Sbjct: 461 QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAAC 520
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA-----------FRFFH 444
+ + E+ I+LF+ ML + P+ F IL C + C F
Sbjct: 521 SRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCAD 580
Query: 445 SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK 504
++ N ++ +G K GSI + V ++ T+ L+
Sbjct: 581 TFVCNVLIDMYG-------KCGSIRSVMKVFEETREKNLI-------------TWTALIS 620
Query: 505 ACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 562
G Y +AL E ++G P+++++ ++ C V+ + + + M D G++P
Sbjct: 621 CLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEP 680
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 602
++ Y A+ + + K+A L EM P W T+
Sbjct: 681 EMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTF 720
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 238 LDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYT 295
L+ P+ + I AC + +++ +L I P+ Y F S++++ S+ DLT
Sbjct: 505 LEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLG 564
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL-----KLDV 350
+I+ ++ K D + + + ++ DMY + + SV ++ + ++
Sbjct: 565 SSIHGLIT----KTDFSCADTFV--------CNVLIDMYGKCGSIRSVMKVFEETREKNL 612
Query: 351 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 410
T++ +I Q AL+ + S G + V++ S++ AC H G+V++ + LF++
Sbjct: 613 ITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQK 672
Query: 411 MLLAGCEP 418
M G EP
Sbjct: 673 MKDYGVEP 680
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 157/399 (39%), Gaps = 51/399 (12%)
Query: 269 LLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ +Q N FN+++ S+ D+ ++ M+ G P+ ++ + LL C +
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS--CASLD 128
Query: 327 VDLAQDMYK-ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
V ++ LK+ G D F + ++ ++ L +MA +V DM +
Sbjct: 129 VRAGTQLHGLSLKY----GLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLE--- 181
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH--ACVEACQYDRAFRFF 443
W+ +++ H G +++ + F E++ G F +L +CV+ +
Sbjct: 182 -TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCS 240
Query: 444 HSWKG--------NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 495
+ KG N ++ ++G K G+ H A + + I+S+ T
Sbjct: 241 ATKKGLDCEISVVNSLISAYG-------KCGNTHMAERMFQDAGSWDIVSWNA--IICAT 291
Query: 496 TSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
+ N L A L M G SPNQ T+ ++ + + + +I +
Sbjct: 292 AKSENPL---------KALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Query: 556 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS-KYGS 614
G + ++ I + N + + ++ ++ N V +N LL + K G
Sbjct: 343 IKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRD----KNIVCWNALLSGYANKDGP 398
Query: 615 VLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQ 653
+ CL+++ M + G++P +Y ++ C +Q
Sbjct: 399 I-----CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQ 432
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 140/317 (44%), Gaps = 29/317 (9%)
Query: 255 LCGDFMKSRYIYED--LLNQKITP-NIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKP 309
L G +M SR + E L ++ +P +I ++ +M+ +S++ Y L Y+ M++ G+ P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 310 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 369
D ++ +L+ C V + + ++ + HL LD T +T+I ++A + +
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH----DLDELTSNTLIDMYAKCGDMKGS 786
Query: 370 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
+V +MR N V+W+SLIN A G E A+++F+ M + P+ F +L A
Sbjct: 787 SQVFDEMRRRS---NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 430 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL----S 485
C A + + F M+G +G + + + + + L
Sbjct: 844 CSHAGKVSDGRKIF-----EMMIGQYG-------IEARVDHVACMVDLLGRWGYLQEADD 891
Query: 486 FTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSP-NQITWSILIDICGGTEN 544
F E P +++LL AC + I+ K + L P N + +L +I
Sbjct: 892 FIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGC 951
Query: 545 VEGAIEILKSMGDAGIK 561
E A + K M D G+K
Sbjct: 952 WEKANALRKVMRDRGVK 968
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 190/439 (43%), Gaps = 53/439 (12%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
F +++S DL + + + K N+++ A++D CG +R I+E +
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 271 NQ-KITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC-VAGRVD 328
++ +T N + + + + N + ++++ M G+ D LKAC V G
Sbjct: 491 DRDNVTWNTIIGSYVQDENESE---AFDLFKRMNLCGIVSDGACLASTLKACTHVHG--- 544
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
L Q K++ L L D+ T S++I +++ + + A KV + V V+
Sbjct: 545 LYQG--KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV----VSM 598
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE------ACQY-----D 437
++LI + L E+A+ LF+EML G P+ F I+ AC + Q+
Sbjct: 599 NALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Query: 438 RAFRFFHSWKGNKMLGSFGEGYNSN--LKQGSIHNATTVP---------------NGFSN 480
R F + G +LG + NS + ++ + + P NGF
Sbjct: 658 RGFSSEGEYLGISLLGMY---MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 481 SQILSFTE--RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILI 536
+ + E P +T+ T+L+ C S +A+ + + + +++T + LI
Sbjct: 715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLI 774
Query: 537 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 596
D+ +++G+ ++ M + +V+++ + I ++ + AL +++ M+ I
Sbjct: 775 DMYAKCGDMKGSSQVFDEMRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Query: 597 PNWVTYNTLLKARSKYGSV 615
P+ +T+ +L A S G V
Sbjct: 832 PDEITFLGVLTACSHAGKV 850
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 134/279 (48%), Gaps = 25/279 (8%)
Query: 233 ALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRD- 291
++K LD N+Y+ +I+ C D +R +++ + + P + +N+++ +R
Sbjct: 155 SMKLGLDD-NVYVCPTLINMYTECEDVDSARCVFDRI----VEPCVVCYNAMITGYARRN 209
Query: 292 -LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 350
L++++ MQ LKP+ + +L +C + G +DL + ++K K +K++
Sbjct: 210 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN- 268
Query: 351 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 410
+ +I +FA A+ + MR +T AWS++I A A+ G E+++ +FE
Sbjct: 269 ---TALIDMFAKCGSLDDAVSIFEKMRYK----DTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 411 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ-GSIH 469
M +P+ F +L+AC + + ++F ++M+ F G ++K GS+
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYF-----SQMVSKF--GIVPSIKHYGSMV 374
Query: 470 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 508
+ + ++ F ++ P +PT + LL AC S
Sbjct: 375 DLLSRAGNLEDA--YEFIDKLPISPTPMLWRILLAACSS 411
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 183/421 (43%), Gaps = 59/421 (14%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLC---GDFMKSRYIYEDLL 270
+IS+ R+L+ ++AY A+K H++ ++ +I+ C +R+++E +
Sbjct: 35 LISKCNSLRELMQ-IQAY-AIKSHIE--DVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 271 NQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNL---GLKPDMTSYNILLKACCVAGRV 327
P+I +FNS+ SR T L ++ + + G+ PD ++ LLKAC VA +
Sbjct: 91 E----PDIVIFNSMARGYSR-FTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 328 DLAQDMYKELKHLESVGRLKLD--VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
+ + + H S+ +L LD V+ T+I ++ + + A V + V
Sbjct: 146 EEGRQL-----HCLSM-KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV---- 195
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
V ++++I A +A+ LF EM +PN +L +C D ++ H
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHK 254
Query: 446 WKGNKMLGSFGEGYNSNL-----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
+ + + N+ L K GS+ +A +S E+ + T + ++
Sbjct: 255 YAKKHSFCKYVK-VNTALIDMFAKCGSLDDA------------VSIFEKMRYKDTQA-WS 300
Query: 501 TLLKACGSDYYHAKA-----LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
++ A + H KA + M++ + P++IT+ L++ C T VE + M
Sbjct: 301 AMIVAYAN---HGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 556 -GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 614
GI P + Y + + + + N + A YE + I P + + LL A S + +
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDA---YEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 615 V 615
+
Sbjct: 415 L 415
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/394 (18%), Positives = 157/394 (39%), Gaps = 64/394 (16%)
Query: 276 PNIYVFNSLMNVNSRDLTYT--LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
P I+ N+++ R Y L ++ + G+ P++ +YN++ +A + ++A +
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
YK L + T+ ++K + A+++K DM G ++ V +S L+
Sbjct: 188 YK---LFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM 244
Query: 394 ACAHAGLVEQAIQLFEEM----------------LLAG---------------------- 415
C + ++L++E+ L+ G
Sbjct: 245 GCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENS 304
Query: 416 -CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM--------LGSFGEGYNSNLKQG 466
+ +N +L A E ++D A + F + K LG+F N G
Sbjct: 305 KVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGG 364
Query: 467 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL-KACGSDYY-HAKALINEMKTVG 524
A V + F +P T ++N L+ + C ++ A+ L EM+
Sbjct: 365 KFEEAMEVFRQMGD---------FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 415
Query: 525 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 584
+ P++ T+ +L+D C ++ K+M ++ ++P++ Y +++ A
Sbjct: 416 VKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 475
Query: 585 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 618
+ ++ M S ++ + Y +++A S+ G + E+
Sbjct: 476 SFFDMMVS-KLKMDDEAYKFIMRALSEAGRLDEM 508
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/290 (17%), Positives = 129/290 (44%), Gaps = 26/290 (8%)
Query: 168 LARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISA 227
+A F++ ++ LV ++ K + + +AV+ + P +++ ++ K D
Sbjct: 201 IATFRILVKGLVSNDNLEKAMEIKED--MAVKGFVVDP---VVYSYLMMGCVKNSDADGV 255
Query: 228 LEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMK-----SRYIYEDLL--NQKITPNIYV 280
L+ Y LK+ L G ++ ++ + G FMK + YE+ + N K+ +
Sbjct: 256 LKLYQELKEKLGG---FVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMA 312
Query: 281 FNSLMNVNSRDLTY--TLNIYQIMQNLGLKP-----DMTSYNILLKACCVAGRVDLAQDM 333
+N ++ S + + L ++ ++ P ++ ++N+++ C G+ + A ++
Sbjct: 313 YNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV 372
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
++++ + D +++ ++ D +L A K+ +M V + + L++
Sbjct: 373 FRQMGDF----KCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 394 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
C G +++ ++ M+ + PN +N + ++A + D A FF
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF 478
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 202/463 (43%), Gaps = 68/463 (14%)
Query: 247 RAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQN 304
+++I+ C D +R+++E N I ++Y++NSLM+ S++ + TL +++ + N
Sbjct: 43 KSLINVYFTCKDHCSARHVFE---NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLN 99
Query: 305 LGL-KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA 363
+ PD ++ ++KA GR L + ++ + V DV S+++ ++A
Sbjct: 100 CSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYV----CDVVVASSLVGMYAKF 155
Query: 364 KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 423
L++ +L+V +M V +W+++I+ +G E+A++LF M +G EPN+
Sbjct: 156 NLFENSLQVFDEMPERDV----ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSL 211
Query: 424 NIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQI 483
+ + AC +R K K E NS L + +
Sbjct: 212 TVAISACSRLLWLERGKEIHR--KCVKKGFELDEYVNSAL-----------VDMYGKCDC 258
Query: 484 LSFT-ERFPFTPTTS--TYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILIDI 538
L E F P S +N+++K D ++N M G P+Q T + ++
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 539 CGGTEN------VEG----------------AIEILKSMGDAGIKPDVIAYT-------- 568
C + N + G I++ G+A + V + T
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 569 -TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
I + N+ +A+ +Y++M S + P+ VT+ ++L A S+ ++ + +Q I+
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQ---IHLS 435
Query: 628 MQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKKSEL 670
+ ++ + ++ L L++ + + + +E F+SI K ++
Sbjct: 436 ISESRLETDELLLSALLDMYSK--CGNEKEAFRIFNSIPKKDV 476
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 158/361 (43%), Gaps = 63/361 (17%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYS 354
L ++ M++ G +P+ S + + AC ++ +++ H + V + +LD + S
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEI-----HRKCVKKGFELDEYVNS 247
Query: 355 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 414
++ ++ ++A +V M + VAW+S+I G + +++ M++
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSL----VAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 415 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY------NSNL----- 463
G P+ IL AC R+ H G F GY N+++
Sbjct: 304 GTRPSQTTLTSILMAC------SRSRNLLH--------GKFIHGYVIRSVVNADIYVNCS 349
Query: 464 ------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKA 515
K G + A TV FS +Q ++N ++ + S +++ A
Sbjct: 350 LIDLYFKCGEANLAETV---FSKTQ----------KDVAESWNVMISSYISVGNWFKAVE 396
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
+ ++M +VG+ P+ +T++ ++ C +E +I S+ ++ ++ D + + + +
Sbjct: 397 VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYS 456
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
+ N K+A ++ + ++ V++ ++ A YGS + ++ L + +MQK G KP
Sbjct: 457 KCGNEKEAFRIFNSIPKKDV----VSWTVMISA---YGSHGQPREALYQFDEMQKFGLKP 509
Query: 636 N 636
+
Sbjct: 510 D 510
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 178/443 (40%), Gaps = 58/443 (13%)
Query: 172 QLPIRELVQPSDMIKRCVLSRNPKLAVRYASLL-----PHAHILFCNIISEFGKRRDLIS 226
++P + LV + MIK V + K V + + + +I+ + R+L+
Sbjct: 268 KMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLH 327
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGD-------FMKSRYIYEDLLNQKITPNIY 279
+ + + + ++Y+ ++ID CG+ F K++ + N I+ I
Sbjct: 328 GKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYIS 387
Query: 280 VFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH 339
V N V +Y M ++G+KPD+ ++ +L AC ++ + ++ +
Sbjct: 388 VGNWFKAVE---------VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI-- 436
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
S RL+ D S ++ +++ + A ++ + + V V+W+ +I+A G
Sbjct: 437 --SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV----VSWTVMISAYGSHG 490
Query: 400 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY 459
+A+ F+EM G +P+ +L AC A D +FF + + E Y
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY 550
Query: 460 NSNL----KQGSIHNATTV----PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY 511
+ + + G + A + P N+++LS TL AC
Sbjct: 551 SCMIDILGRAGRLLEAYEIIQQTPETSDNAELLS---------------TLFSACCLHLE 595
Query: 512 HAKA-LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI--KPDVIAYT 568
H+ I + + T+ +L ++ E+ + A + M + G+ KP
Sbjct: 596 HSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 655
Query: 569 TAIKVC---VESKNFKQALTLYE 588
+ KVC E ++ +A +YE
Sbjct: 656 MSDKVCHFFAEDRSHLRAENVYE 678
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 148/363 (40%), Gaps = 36/363 (9%)
Query: 205 PHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
PH ++ +E G L++ + + P+ A++ AC CGD + +R
Sbjct: 143 PHVQTGLISLYAELG-------CLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 265 IYEDLLNQK-ITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
++E + + I N + SR+ LN++ +MQ G+K + + +L AC
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESRE---ALNVFHLMQLEGVKVNGVAMISVLSACTQ 252
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
G +D + + ++ ++K+ V +T++ ++A + A++V M
Sbjct: 253 LGALDQGRWAHSYIER----NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK---- 304
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
N WSS +N A G E+ ++LF M G PN F +L C D R F
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHF 364
Query: 444 HSWKG----NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTY 499
S + L +G + + G + +A +S ++ P P + +
Sbjct: 365 DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDA------------VSIIQQMPMKPHAAVW 412
Query: 500 NTLLKACGSDYYHAKALINEMKTVGL-SPNQITWSILIDICGGTENVEGAIEILKSMGDA 558
++LL A ++ K + L + N + +L +I + + + + +SM
Sbjct: 413 SSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSK 472
Query: 559 GIK 561
G++
Sbjct: 473 GVR 475
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 33/278 (11%)
Query: 236 KHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLT 293
KH ++Y+ +I G C +R +++++ + N+ +NS+M V + L
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTER----NVVSWNSIMTALVENGKLN 196
Query: 294 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 353
+ M PD T+ +LL AC G + L + ++ ++ V L+L+
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQVM----VRELELNCRLG 250
Query: 354 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 413
+ ++ ++A + + A V M V+ N WS++I A G E+A+QLF +M+
Sbjct: 251 TALVDMYAKSGGLEYARLVFERM----VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK 306
Query: 414 -AGCEPNTQCFNIILHACVEACQYDRAFRFFHSW----KGNKMLGSFGEGYNSNLKQGSI 468
+ PN F +L AC D +++FH K M+ +G + + G +
Sbjct: 307 ESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRL 366
Query: 469 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 506
+ A F ++ PF P + TLL AC
Sbjct: 367 NEA------------YDFIKKMPFEPDAVVWRTLLSAC 392
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 24/287 (8%)
Query: 345 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 404
R+ L T S I+ + +L Q+ +V+ + G LNT+ +S++ AC H G ++ A
Sbjct: 39 RINLKPLT-SRIVLLTRRRQLGQIVEEVEAAKKRYG-RLNTIVMNSVLEACVHCGNIDLA 96
Query: 405 IQLFEEML-LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 463
+++F EM G ++ + IL +A + D AF+ + + G+ +S+L
Sbjct: 97 LRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQMLETIEYGTAAGT--PKLSSSL 154
Query: 464 KQG---SIHNATTV--PNG-FSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKA- 515
G ++ NA + NG + IL TP+ YN L+K S+ A
Sbjct: 155 IYGLLDALINAGDLRRANGLLARYDILLLDHG---TPSVLIYNLLMKGYVNSESPQAAIN 211
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG-------DAGIKPDVIAYT 568
L++EM + L P+++T++ LI C +++ A++ M D ++PDV+ YT
Sbjct: 212 LLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYT 271
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCE-IHPNWVTYNTLLKARSKYGS 614
T +K ++ + ++ EMK CE + + + ++ A K GS
Sbjct: 272 TLVKGFGDATDLLSLQEIFLEMKLCENVFIDRTAFTAVVDAMLKCGS 318
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 131/328 (39%), Gaps = 56/328 (17%)
Query: 175 IRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHIL----FCNIISEFGKRRDLISALEA 230
I LV P ++ C + R A+ P++ + + I +RR L +E
Sbjct: 7 ISTLVTPLPLLPSCSFVPTRRCYPRRAT--PYSRRINLKPLTSRIVLLTRRRQLGQIVEE 64
Query: 231 YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR 290
+A KK N + ++++AC CG+
Sbjct: 65 VEAAKKRYGRLNTIVMNSVLEACVHCGNI------------------------------- 93
Query: 291 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 350
DL + +++ + G+ D SY +LK A R+D A M + +++ + G KL
Sbjct: 94 DLALRM-FHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLS- 151
Query: 351 FTYSTIIKVFADAKLWQMALKVKHDM--RSAGVNLNTVAWSSLINACAHAGLV-----EQ 403
S++I DA + L+ + + R + L+ S LI G V +
Sbjct: 152 ---SSLIYGLLDALINAGDLRRANGLLARYDILLLDHGTPSVLIYNLLMKGYVNSESPQA 208
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 463
AI L +EML EP+ +N ++HAC++ D A +FF+ K E Y +
Sbjct: 209 AINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEK------AEEYYDDF 262
Query: 464 KQGSIHNATTVPNGFSN-SQILSFTERF 490
Q + TT+ GF + + +LS E F
Sbjct: 263 LQPDVVTYTTLVKGFGDATDLLSLQEIF 290
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
NT N +L ACV D A R FH +G Y + LK + A + F
Sbjct: 76 NTIVMNSVLEACVHCGNIDLALRMFHEMAEPGGIGVDSISYATILK--GLGKARRIDEAF 133
Query: 479 SNSQILSFTERFPFTP--TTSTYNTLLKAC--GSDYYHAKALINEMKTVGL---SPNQIT 531
+ + + TP ++S LL A D A L+ + L +P+ +
Sbjct: 134 QMLETIEYGTA-AGTPKLSSSLIYGLLDALINAGDLRRANGLLARYDILLLDHGTPSVLI 192
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+++L+ +E+ + AI +L M ++PD + Y T I C++ + A+ + +MK
Sbjct: 193 YNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMK 252
Query: 592 SCE-------IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQ 629
+ P+ VTY TL+K +L +Q+ I+ +M+
Sbjct: 253 EKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQE---IFLEMK 294
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 155/401 (38%), Gaps = 87/401 (21%)
Query: 269 LLNQKITPNIYVFNSLMNVNSRDLTY--TLNIY-QIMQNLGLKPDMTSYNILLKACCVAG 325
L NQ PN++++NS++ + + Y + IY Q+++ PD ++ + K+C G
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 326 RVDLAQ----------------------DMYKELKHLESVGRL-----KLDVFTYSTIIK 358
L + DMY + L ++ + DV ++++++
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
+A + A + H M ++ V+W+++I+ G +A+ F EM LAG EP
Sbjct: 184 GYARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP 239
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ +L +C + LGS G
Sbjct: 240 DEISLISVLPSCAQ-------------------LGSLELG-------------------- 260
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLK---ACGSDYYHAKALINEMKTVGLSPNQITWSIL 535
I + ER F T N L++ CG A L +M+ + I+WS +
Sbjct: 261 --KWIHLYAERRGFLKQTGVCNALIEMYSKCGV-ISQAIQLFGQME----GKDVISWSTM 313
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK-SCE 594
I N GAIE M A +KP+ I + + C +++ L ++ M+ +
Sbjct: 314 ISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQ 373
Query: 595 IHPNWVTYNTLLKARSKYGSV---LEVQQCLAIYQDMQKAG 632
I P Y L+ ++ G + +E+ + + + D + G
Sbjct: 374 IEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWG 414
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 156/377 (41%), Gaps = 35/377 (9%)
Query: 165 MEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHILFCN-IISEFGKRRD 223
E+ RF P + + + C L + ++ P H++ N +I + K D
Sbjct: 104 FELPDRFTFPF--MFKSCASLGSCYLGK--QVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 224 LISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNS 283
L+ A + +D + + ++ + +++ G K++ ++ +L++ I + +
Sbjct: 160 LVDAHKVFDEMYER----DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISG 215
Query: 284 LMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 343
+ ++ ++ MQ G++PD S +L +C G ++L + ++ + E
Sbjct: 216 YTGIGC--YVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHL---YAERR 270
Query: 344 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 403
G LK + +I++++ + A+++ M V ++WS++I+ A+ G
Sbjct: 271 GFLK-QTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV----ISWSTMISGYAYHGNAHG 325
Query: 404 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 463
AI+ F EM A +PN F +L AC + R+F + + + E Y +
Sbjct: 326 AIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLI 385
Query: 464 ----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE 519
+ G + A + T+ P P + + +LL +C + AL+
Sbjct: 386 DVLARAGKLERAVEI------------TKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAM 433
Query: 520 MKTVGLSPNQITWSILI 536
V L P + +L+
Sbjct: 434 DHLVELEPEDMGNYVLL 450
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 181/417 (43%), Gaps = 47/417 (11%)
Query: 164 LMEVLARFQLPIRELVQP-----SDMIKRCVLSRNPKLAVRYASLLPHAHILFCN-IISE 217
LM V+A E+V+ + MI +L+++ A RY L P I+ N +IS
Sbjct: 40 LMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISG 99
Query: 218 FGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPN 277
+ + +++ A +D + ++ + +++ GD +++D+ + N
Sbjct: 100 YIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYANIGDMEACERVFDDMPER----N 151
Query: 278 IYVFNSLMNVNSRD--LTYTLNIYQIMQNLG-LKPDMTSYNILLKACCVAGRVDLAQDMY 334
++ +N L+ +++ ++ L ++ M + G + P+ + ++L AC G D + ++
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 335 KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 394
K + E++G K+DV + +I ++ ++A++V ++ + ++W+++IN
Sbjct: 212 K---YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR----DLISWNTMING 264
Query: 395 CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS 454
A G +A+ LF EM +G P+ F +L AC + +F N M
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF-----NSMFTD 319
Query: 455 FGEGYNSNLKQGSIHNATTVPNGFSN----SQILSFTERFPFTPTTSTYNTLLKACGSDY 510
F I + V + S +Q + F + P + TLL G+
Sbjct: 320 FS-------IMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL---GASK 369
Query: 511 YHAKALINEM---KTVGLSP-NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
+ K I E+ + + L P N + +L +I G + A + +M D G K +
Sbjct: 370 VYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE 426
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 141/362 (38%), Gaps = 54/362 (14%)
Query: 291 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 350
D L+++ Q +G + D SY+ L+ + D + + +++ R L
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL-- 118
Query: 351 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 410
+ +I+ + A A+ V H + S + ++LIN G +E+A F+
Sbjct: 119 --FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG 176
Query: 411 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 470
PN+ FNI++ ++ C ++ A + F ++ML
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVF-----DEML------------------ 213
Query: 471 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK-AC-GSDYYHAKALINEMKTVGLSPN 528
P+ TYN+L+ C D AK+L+ +M + PN
Sbjct: 214 ------------------EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPN 255
Query: 529 QITWSILID--ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
+T+ +L+ C G N A +++ M G KP ++ Y + + +A L
Sbjct: 256 AVTFGLLMKGLCCKGEYN--EAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLL 313
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
EMK I P+ V YN L+ V E + L +MQ G KPN +I+
Sbjct: 314 LGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT---EMQMKGCKPNAATYRMMIDG 370
Query: 647 WC 648
+C
Sbjct: 371 FC 372
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 125/301 (41%), Gaps = 18/301 (5%)
Query: 295 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 354
++++ + + + S N L+ G ++ A+ + K + RL+ + +++
Sbjct: 135 AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM----RLRPNSVSFN 190
Query: 355 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 414
+IK F D W+ A KV +M V + V ++SLI + +A L E+M+
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
Query: 415 GCEPNTQCFNIILHACVEACQYDRAFR--FFHSWKGNKM-LGSFGEGYNSNLKQGSIHNA 471
PN F +++ +Y+ A + F ++G K L ++G + K+G I A
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 472 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQ 529
+ +I P YN L+ ++ +A ++ EM+ G PN
Sbjct: 311 KLLLGEMKKRRI---------KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
T+ ++ID E+ + + +L +M + P + + ++ N A + E
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEV 421
Query: 590 M 590
M
Sbjct: 422 M 422
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 8/252 (3%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
+I F + D +A + +D + + P++ Y ++I D K++ + ED++ ++
Sbjct: 192 LIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKR 251
Query: 274 ITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
I PN F LM + + M+ G KP + +Y IL+ GR+D A+
Sbjct: 252 IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK 311
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
+ E+K R+K DV Y+ ++ A +V +M+ G N + +
Sbjct: 312 LLLGEMKKR----RIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
I+ + + + ML + P F ++ ++ D A F G K
Sbjct: 368 IDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHAC-FVLEVMGKKN 426
Query: 452 LGSFGEGYNSNL 463
L SFG G NL
Sbjct: 427 L-SFGSGAWQNL 437
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 145/340 (42%), Gaps = 39/340 (11%)
Query: 316 ILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD------VFTYSTIIKVFADAKLWQMA 369
+LL A C G V A MY LE +G +D V ++ ++ + ++ + A
Sbjct: 217 VLLDALCKEGHVREAS-MY-----LERIGG-TMDSNWVPSVRIFNILLNGWFRSRKLKQA 269
Query: 370 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
K+ +M++ V V + +LI V+ A+++ EEM +A E N FN I+
Sbjct: 270 EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDG 329
Query: 430 CVEACQYDRAF----RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
EA + A RFF G ++ YNS +K + A +P S+IL
Sbjct: 330 LGEAGRLSEALGMMERFFVCESGPTIVT-----YNSLVK--NFCKAGDLPGA---SKILK 379
Query: 486 FTERFPFTPTTSTYNTLLKACGSDYY--HAKA-----LINEMKTVGLSPNQITWSILIDI 538
PTT+TYN K Y+ H K L ++ G SP+++T+ +++ +
Sbjct: 380 MMMTRGVDPTTTTYNHFFK-----YFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM 434
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 598
+ A+++ K M + GI PD++ T I + + ++A ++ I P
Sbjct: 435 LCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQ 494
Query: 599 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDY 638
++T+ + G ++ ++ + + PN Y
Sbjct: 495 YITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTY 534
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 8/237 (3%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYED 268
+ + +I + + R + A+E + +K N ++ IID G G ++ + E
Sbjct: 286 VTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMER 345
Query: 269 LLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+ P I +NSL+ + DL I ++M G+ P T+YN K +
Sbjct: 346 FFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNK 405
Query: 327 VDLAQDMY-KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
+ ++Y K ++ S RL TY I+K+ + +A++V +M++ G++ +
Sbjct: 406 TEEGMNLYFKLIEAGHSPDRL-----TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDL 460
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ + LI+ ++E+A + F+ + G P F +I + D A R
Sbjct: 461 LTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 248 AIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNL 305
A+ID CG + I+E L + I +NS++ S + + ++I++ M
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVS----WNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAK 364
G+ D S + L AC +L + + + H + L DV++ ST+I ++A
Sbjct: 537 GICYDCVSISAALSAC-----ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML-LAGCEPNTQCF 423
+ A+ V M+ N V+W+S+I AC + G ++ ++ LF EM+ +G P+ F
Sbjct: 592 NLKAAMNVFKTMKEK----NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITF 647
Query: 424 NIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQI 483
I+ +C D RFF S E Y +Q H A V + F +
Sbjct: 648 LEIISSCCHVGDVDEGVRFFR---------SMTEDYGIQPQQE--HYACVV-DLFGRAGR 695
Query: 484 LS----FTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILI 536
L+ + PF P + TLL AC A + K + L P+ + +LI
Sbjct: 696 LTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLI 752
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 181/425 (42%), Gaps = 54/425 (12%)
Query: 201 ASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFM 260
+ +LP A I F +++ K +L + + + +H ++++ A+IDA C
Sbjct: 334 SGVLPDA-ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC---- 388
Query: 261 KSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILL 318
+ + +++ +Q + ++ VF ++++ + Y +L +++ + + + P+ + +L
Sbjct: 389 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 319 KACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRS 378
+ + L ++++ + R + +I ++A +A ++ +
Sbjct: 449 PVIGILLALKLGRELHGFIIKKGFDNRCNIGC----AVIDMYAKCGRMNLAYEIFERLSK 504
Query: 379 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII-LHACVEACQYD 437
+ V+W+S+I CA + AI +F +M ++G C++ + + A + AC
Sbjct: 505 RDI----VSWNSMITRCAQSDNPSAAIDIFRQMGVSGI-----CYDCVSISAALSACANL 555
Query: 438 RAFRFFHSWKGNKMLGSFGEGYNSN-------LKQGSIHNATTVPNGFSNSQILSFTERF 490
+ F + G + S S K G++ A V I+S
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS----- 610
Query: 491 PFTPTTSTYNTLLKACGSDYYHAK-----ALINEM-KTVGLSPNQITWSILIDICGGTEN 544
+N+++ ACG+ H K L +EM + G+ P+QIT+ +I C +
Sbjct: 611 --------WNSIIAACGN---HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD 659
Query: 545 VEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
V+ + +SM D GI+P Y + + + +A YE +KS P+ +
Sbjct: 660 VDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA---YETVKSMPFPPDAGVWG 716
Query: 604 TLLKA 608
TLL A
Sbjct: 717 TLLGA 721
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 163/410 (39%), Gaps = 41/410 (10%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYE--DLLNQKITPNIYVFNSLMNVNSRD--LTYTLNIY 299
Y I+ +CG F ++ DL I P +NS+++ R+ L L Y
Sbjct: 71 YTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRP----WNSIISSFVRNGLLNQALAFY 126
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHL-ESVGRLKLDV--FTYSTI 356
M G+ PD++++ L+KAC +A +K + L ++V L +D F S++
Sbjct: 127 FKMLCFGVSPDVSTFPCLVKAC-------VALKNFKGIDFLSDTVSSLGMDCNEFVASSL 179
Query: 357 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
IK + L + V + + + V W+ ++N A G ++ I+ F M +
Sbjct: 180 IKAY----LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQI 235
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 476
PN F+ +L C D + + ++ G + ++K + +
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQL------HGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 477 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSI 534
S++ R T T+N ++ ++L EM + G+ P+ IT+S
Sbjct: 290 FDDASKLFRMMSR----ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 535 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
L+ EN+E +I + I D+ + I + + A ++ + S +
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 405
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
+ V + ++ G ++ L +++ + K PN+ L ++
Sbjct: 406 V----VVFTAMISGYLHNGLYID---SLEMFRWLVKVKISPNEITLVSIL 448
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 175/424 (41%), Gaps = 42/424 (9%)
Query: 153 VMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHILFC 212
V G EA+E++ + + + E PS +I+ C + +L + HA++L
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPS-VIRACATAGLLQLGKQV-----HAYVLRR 315
Query: 213 NIISEFGKRRDLIS------ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIY 266
S F L+S + A+ + + ++ + A++ G +++ I+
Sbjct: 316 EDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 267 EDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+++ + I + + + L + L ++ M+ G +P +++ +K+C V G
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGE--EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
Q + +L + L + +I ++A + + A +V M L++V
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAG----NALITMYAKCGVVEEARQVFRTMPC----LDSV 484
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 446
+W++LI A G +A+ ++EEML G P+ +L AC A D+ ++F S
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 447 KGNKMLGSFGEGYNSNLKQGSIHNATTV-----PNGFSNSQILSFTERFPFTPTTSTYNT 501
+ + G+ H A + FS+++ S E PF PT +
Sbjct: 545 E-----------TVYRIPPGADHYARLIDLLCRSGKFSDAE--SVIESLPFKPTAEIWEA 591
Query: 502 LLKACGSDYYHAKALINEMKTVGLSP-NQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
LL C +I K GL P + T+ +L ++ T E + K M D G+
Sbjct: 592 LLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGV 651
Query: 561 KPDV 564
K +V
Sbjct: 652 KKEV 655
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 191/476 (40%), Gaps = 60/476 (12%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKS-RYIYE 267
+++ +I+ F D SA+ + +K P+ + + +++ L D K +
Sbjct: 114 VMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHA 173
Query: 268 DLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLG--LKPDMTSYNILLKACCVAG 325
L V N+L++V S+ + ++ + L+ D S+ ++ G
Sbjct: 174 AALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNG 233
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
DL +++ + + + + Y+ +I + + +Q AL++ M S+G+ L+
Sbjct: 234 YFDLGEELLEGMDD-------NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC-QYDRAFRFFH 444
+ S+I ACA AGL++ Q+ +L E + F+ L + C ++D A F
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFE 344
Query: 445 --------SW----KGNKMLGSFGEG-------YNSNLKQGSIHNATTVPNGFSNS--QI 483
SW G G GE N+ I + NGF ++
Sbjct: 345 KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 484 LSFTERFPFTPTTSTYNTLLKACG-------SDYYHAKALINEMKTVGLSPNQITWSILI 536
S +R F P ++ +K+C YHA+ L +G + + LI
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL-----KIGFDSSLSAGNALI 459
Query: 537 DICGGTENVEGAIEILKSMGDAGIKP--DVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
+ VE A ++ ++M P D +++ I + + +A+ +YEEM
Sbjct: 460 TMYAKCGVVEEARQVFRTM------PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYK--PNDYYLEELIEEWC 648
I P+ +T T+L A S G V + ++ Y D + Y+ P + LI+ C
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRK----YFDSMETVYRIPPGADHYARLIDLLC 565
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 210 LFCNIISEFGKRR--DLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE 267
L+ +I++FG+ + D I + L+K + Y + L G ++ I
Sbjct: 97 LYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILF 156
Query: 268 DLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
+ + P+ FN ++N V+++ I+ LG++ D NIL+K C +G
Sbjct: 157 GMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESG 216
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
++ A + E +S + +V T+S +I+ F + ++ A K+ M + +T
Sbjct: 217 NLEAALQLLDEFPQQKS----RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDT 272
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
+ ++ LI+ G VE+ I L E M + GCEPN + +L+ ++
Sbjct: 273 ITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLD 319
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 23/246 (9%)
Query: 398 AGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE 457
AG + +AI++ M GC P+++ FN IL+ V A +D + F S LG +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVS---APKLGVEID 201
Query: 458 GYNSNL------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SD 509
N+ + G++ A + + F + P T++ L++ C
Sbjct: 202 ACCLNILIKGLCESGNLEAALQLLDEFPQQKS---------RPNVMTFSPLIRGFCNKGK 252
Query: 510 YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT 569
+ A L+ M+ + P+ IT++ILI VE I++L+ M G +P+ Y
Sbjct: 253 FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQE 312
Query: 570 AIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQ 629
+ ++ K +A + +M S + P++++Y ++ + SV+E+ L + M
Sbjct: 313 VLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVL---RQMV 369
Query: 630 KAGYKP 635
G+ P
Sbjct: 370 NHGFVP 375
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 111/255 (43%), Gaps = 29/255 (11%)
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ------GSIHN 470
+P + ++++ +A YD + K K F E + NL + G I+
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRC-RFSEEFFYNLMRIYGNLAGRINR 150
Query: 471 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS----DYYHAKALINEMKTVGLS 526
A + G + F P++ ++N +L S D H K ++ K +G+
Sbjct: 151 AIEILFGMPD---------FGCWPSSKSFNFILNLLVSAKLFDEIH-KIFVSAPK-LGVE 199
Query: 527 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
+ +ILI + N+E A+++L +P+V+ ++ I+ F++A L
Sbjct: 200 IDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKL 259
Query: 587 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEE 646
E M+ I P+ +T+N L+ K G V++ + + + M+ G +PN +E++
Sbjct: 260 LERMEKERIEPDTITFNILISGLRKKG---RVEEGIDLLERMKVKGCEPNPGTYQEVL-- 314
Query: 647 WCEGVIQDNREYQAE 661
G++ R +A+
Sbjct: 315 --YGLLDKKRNLEAK 327
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 189/468 (40%), Gaps = 82/468 (17%)
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRD---LTYTLNIYQIMQNLGLKPDMTSYNILLKAC 321
+Y ++L + +TP+ + F L+N RD L ++ + GL ++ N L+K
Sbjct: 121 LYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY 180
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
+ G +D+A+ ++ R K DVF+++ +I + K ++ ++++ +M V
Sbjct: 181 SLCGLMDMARGVFDR--------RCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLV 232
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
+ +V +++AC+ + ++ E + EP+ + N +++A + D A R
Sbjct: 233 SPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVR 292
Query: 442 FFHSWKGNKMLG--SFGEGY--NSNLKQGSIH----------NATTVPNGFSNS------ 481
F S K ++ S +GY NLK + + T + +G+ +
Sbjct: 293 IFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNES 352
Query: 482 -QILSFTERFPFTPTTSTYNTLLKACG---------------------SDYYHAKALINE 519
+I + P T ++L AC +D ALI+
Sbjct: 353 LEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDM 412
Query: 520 MKTVGLSP------------NQITWSILIDICGGTENVEG--AIEILKSMGDAGIKPDVI 565
G S ++ TW+ + + G N +G AI++ M D I+PD I
Sbjct: 413 YFKCGCSEKAQKVFHDMDQRDKFTWTAM--VVGLANNGQGQEAIKVFFQMQDMSIQPDDI 470
Query: 566 AYTTAIKVCVESKNFKQALTLYEEMKS-CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 624
Y + C S QA + +M+S I P+ V Y ++ + G V E
Sbjct: 471 TYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEA------ 524
Query: 625 YQDMQKAGYKPNDYYLEELIEEWCEGVIQ-DNREYQAEFSSIKKSELE 671
Y+ ++K PN L+ G + N E AE ++ K ELE
Sbjct: 525 YEILRKMPMNPNSIVWGALL-----GASRLHNDEPMAELAAKKILELE 567
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 145/340 (42%), Gaps = 21/340 (6%)
Query: 205 PHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY 264
P A+ +++ + ++ S L + +K D P I+R +I A G G ++
Sbjct: 72 PQAYRFVIKTLAKSSQLENISSVLYHLEVSEK-FDTPES-IFRDVIAAYGFSGRIEEAIE 129
Query: 265 IYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQN---LGLKPDMTSYNILLKAC 321
++ + N + P+ Y N+L+ V R + +I+ +G++ + +++ IL+ A
Sbjct: 130 VFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDAL 189
Query: 322 CVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 381
C G VD A ++ + + + +L S++ K D+ + + + D+R
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDV-IGYLEDLRKTRF 247
Query: 382 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 441
+ ++ ++ G ++ + + +M EP+ C+ I+L + Y +A +
Sbjct: 248 SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADK 307
Query: 442 FFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 498
F + + ++ N KQ I A +++S + P T
Sbjct: 308 LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL---------KMMSSMNKLGSEPNVVT 358
Query: 499 YNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILI 536
YN L+KA D AK L EM+T G++ N T+ I+I
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMI 398
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
Query: 492 FTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
F+P Y +++ G +++N+MK + P+ + ++I++ E+ A
Sbjct: 247 FSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKAD 306
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 609
++ + G+ PDV Y I + + + AL + M PN VTYN L+KA
Sbjct: 307 KLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366
Query: 610 SKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCE 649
K G ++ + ++++M+ G N + + +I + E
Sbjct: 367 VKAG---DLSRAKTLWKEMETNGVNRNSHTFDIMISAYIE 403
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Query: 267 EDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVA 324
EDL + +P + + +M V +++ M+ ++PD+ Y I+L+
Sbjct: 240 EDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIAD 299
Query: 325 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 384
A ++ EL L DV+TY+ I + ALK+ M G N
Sbjct: 300 EDYPKADKLFDELLLLGLAP----DVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 385 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
V ++ LI A AG + +A L++EM G N+ F+I++ A +E
Sbjct: 356 VVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIE 403
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 181/437 (41%), Gaps = 60/437 (13%)
Query: 222 RDLISALEAYDALKKHLDGPNMYIYRAIIDAC-------GLCGDFMKSRYIYEDLLNQK- 273
R L+S + + L K LD Y+ D C G +++ ++ + Q+
Sbjct: 72 RSLMSRISDREPLVKTLDK---YVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRW 128
Query: 274 ITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACC-VAGRVDLA 330
P+ V++ L++V + + ++ M+N G +PD + YN L+ A +
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+ + L ++ + R + +V TY+ +++ FA + + D+ + V+ + ++
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
+++A G++++ + M C+P+ FN+++ + + ++++ + F S
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS----- 303
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDY 510
++ E+ PT T+N+++ G
Sbjct: 304 --------------------------------LMRSKEK----PTLPTFNSMIINYGKAR 327
Query: 511 YHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
KA + +M + P+ IT+ +I + G +V A EI + +G++
Sbjct: 328 MIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLN 387
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
++V + + +A L+ + +HP+ TY L KA +K +VQ + + M
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQ---ILMKKM 444
Query: 629 QKAGYKPNDYYLEELIE 645
+K G PN + E +E
Sbjct: 445 EKDGIVPNKRFFLEALE 461
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 115/267 (43%), Gaps = 14/267 (5%)
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII----LHACVEACQYDRAFRFF 443
+S LI+ G A+ LF EM +GC P+ +N + LH +A ++ +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
KG + YN L+ + N +S P +P T+N ++
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS-----PVSPDVYTFNGVM 250
Query: 504 KACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
A G + +A++ M++ P+ IT+++LID G + E + KS+ + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
P + + + I +++ +A ++++M P+++TY ++ YG V +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMM---YGYCGSVSRA 367
Query: 622 LAIYQDMQKAGYKPNDYYLEELIEEWC 648
I++++ ++ L ++E +C
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYC 394
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 192/469 (40%), Gaps = 71/469 (15%)
Query: 169 ARFQLPIRE----LVQPSD------MIKRCVLSRNPKLAVRYASLLPHAHILFCNIISEF 218
ARF+LP E L+ S I +L N L RY L H + +
Sbjct: 22 ARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAY----ASH 77
Query: 219 GKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNI 278
GK R + AL P+++++ A I+ + G ++ +Y LL+ +I PN
Sbjct: 78 GKIRHSL-------ALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNE 130
Query: 279 YVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK 338
+ F+SL+ S ++ + + LG+ P + + L+ G V AQ ++ +
Sbjct: 131 FTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATG--LVDVYAKGGDVVSAQKVFDRMP 188
Query: 339 HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
+ + + + +I +A Q ++ + + + V+W+ +I+ A
Sbjct: 189 --------ERSLVSSTAMITCYAK----QGNVEAARALFDSMCERDIVSWNVMIDGYAQH 236
Query: 399 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF---RFFHSWKGN------ 449
G A+ LF+++L G +P ++ A + AC A R+ H + +
Sbjct: 237 GFPNDALMLFQKLLAEG-KPKPDEITVV--AALSACSQIGALETGRWIHVFVKSSRIRLN 293
Query: 450 -KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 508
K+ + Y+ K GS+ A V N I++ +N ++
Sbjct: 294 VKVCTGLIDMYS---KCGSLEEAVLVFNDTPRKDIVA-------------WNAMIAGYAM 337
Query: 509 DYYHAKA--LINEMKTV-GLSPNQITWSILIDICGGTENVEGAIEILKSMG-DAGIKPDV 564
Y A L NEM+ + GL P IT+ + C V I I +SMG + GIKP +
Sbjct: 338 HGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKI 397
Query: 565 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
Y + + + K+A YE +K+ + + V ++++L + +G
Sbjct: 398 EHYGCLVSLLGRAGQLKRA---YETIKNMNMDADSVLWSSVLGSCKLHG 443
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 181/437 (41%), Gaps = 60/437 (13%)
Query: 222 RDLISALEAYDALKKHLDGPNMYIYRAIIDAC-------GLCGDFMKSRYIYEDLLNQK- 273
R L+S + + L K LD Y+ D C G +++ ++ + Q+
Sbjct: 72 RSLMSRISDREPLVKTLDK---YVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRW 128
Query: 274 ITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACC-VAGRVDLA 330
P+ V++ L++V + + ++ M+N G +PD + YN L+ A +
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+ + L ++ + R + +V TY+ +++ FA + + D+ + V+ + ++
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
+++A G++++ + M C+P+ FN+++ + + ++++ + F S
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS----- 303
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDY 510
++ E+ PT T+N+++ G
Sbjct: 304 --------------------------------LMRSKEK----PTLPTFNSMIINYGKAR 327
Query: 511 YHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
KA + +M + P+ IT+ +I + G +V A EI + +G++
Sbjct: 328 MIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLN 387
Query: 569 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 628
++V + + +A L+ + +HP+ TY L KA +K +VQ + + M
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQ---ILMKKM 444
Query: 629 QKAGYKPNDYYLEELIE 645
+K G PN + E +E
Sbjct: 445 EKDGIVPNKRFFLEALE 461
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 115/267 (43%), Gaps = 14/267 (5%)
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII----LHACVEACQYDRAFRFF 443
+S LI+ G A+ LF EM +GC P+ +N + LH +A ++ +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
KG + YN L+ + N +S P +P T+N ++
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS-----PVSPDVYTFNGVM 250
Query: 504 KACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 561
A G + +A++ M++ P+ IT+++LID G + E + KS+ + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
P + + + I +++ +A ++++M P+++TY ++ YG V +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMM---YGYCGSVSRA 367
Query: 622 LAIYQDMQKAGYKPNDYYLEELIEEWC 648
I++++ ++ L ++E +C
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYC 394
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 153/382 (40%), Gaps = 50/382 (13%)
Query: 213 NIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQ 272
+I+ +G++ L A Y A + P + R++IDA CG + ++ + +
Sbjct: 675 TLIAVYGRQHKLKEAKRLYLAAGES-KTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEK 733
Query: 273 KITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
P + L+N N +I + ++ D YN L+KA AG++ A
Sbjct: 734 GCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCA 793
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
++Y+ + H V + TY+T+I V+ A+++ + R +G+ L+ +++
Sbjct: 794 SEIYERM-HTSGV---PCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTN 849
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
+I G + +A+ LF EM G +P T +N+++ C + R H
Sbjct: 850 MIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATS-------RLHHEV---- 898
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK--ACGS 508
++L ER STY TL++ A S
Sbjct: 899 ------------------------------DELLQAMERNGRCTDLSTYLTLIQVYAESS 928
Query: 509 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 568
+ A+ I +K G+ + +S L+ +E A M +AGI PD
Sbjct: 929 QFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKR 988
Query: 569 TAIKVCVESKNFKQALTLYEEM 590
T +K + + ++ + YE+M
Sbjct: 989 TILKGYMTCGDAEKGILFYEKM 1010
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+ V ++ ++ G ++ A + F EML GCEP+ +L C Y R R
Sbjct: 187 SVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTML------CTYARWGR-- 238
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNAT-TVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
H+A T +IL +TS YN +
Sbjct: 239 -------------------------HSAMLTFYKAVQERRILL---------STSVYNFM 264
Query: 503 LKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
L + +H K L EM G+ PN+ T+++++ E A++ M G
Sbjct: 265 LSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGF 324
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
P+ + Y++ I + V++ ++++A+ LYE+M+S I P+ T T+L S Y +
Sbjct: 325 VPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATML---SLYYKTENYPK 381
Query: 621 CLAIYQDMQK 630
L+++ DM++
Sbjct: 382 ALSLFADMER 391
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 161/395 (40%), Gaps = 39/395 (9%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYT--LNI 298
P++ +Y ++ G G + + ++L P+ +++ +R ++ L
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 299 YQIMQNLGLKPDMTSYNILLKAC---CVAGRV-DLAQDMYKELKHLESVGRLKLDVFTYS 354
Y+ +Q + + YN +L + G+V DL +M +E + + FTY+
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE--------GVPPNEFTYT 297
Query: 355 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 414
++ +A + ALK +M+S G V +SS+I+ AG E+AI L+E+M
Sbjct: 298 LVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQ 357
Query: 415 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 474
G P+ +L + Y +A F + NK+ + +G I
Sbjct: 358 GIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPA-------DEVIRGLIIRIYGK 410
Query: 475 PNGFSNSQ-ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQIT 531
F ++Q + TER TY + + + KAL I MKT + ++
Sbjct: 411 LGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 470
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+ +++ +NV+ A E +++ G+ PD + C + N L L E+ K
Sbjct: 471 YIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASS-------CNDMLNLYTRLNLGEKAK 522
Query: 592 SC-------EIHPNWVTYNTLLKARSKYGSVLEVQ 619
++H + Y T ++ K G V E Q
Sbjct: 523 GFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQ 557
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 25/292 (8%)
Query: 346 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS---SLINACAHAGLVE 402
L+++ T +T+I V+ Q LK + A T S S+I+A G +E
Sbjct: 666 LRMEEETIATLIAVYGR----QHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLE 721
Query: 403 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS-WKGNKMLGSFGEGYNS 461
A LF E GC+P +I+++A ++ A + + N L + G YN+
Sbjct: 722 DAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVG--YNT 779
Query: 462 NLKQ----GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL- 516
+K G + A+ + S + + TYNT++ G KA+
Sbjct: 780 LIKAMLEAGKLQCASEIYERMHTSGV---------PCSIQTYNTMISVYGRGLQLDKAIE 830
Query: 517 -INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
+ + GL ++ ++ +I G + A+ + M GIKP +Y +K+C
Sbjct: 831 IFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICA 890
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 627
S+ + L + M+ + TY TL++ ++ E ++ + + ++
Sbjct: 891 TSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE 942
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 493 TPTTSTYNTLLKA---CG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG 547
TP S +++ A CG D Y L E G P +T SIL++
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAY---GLFMESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 548 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 607
A I ++ + I+ D + Y T IK +E+ + A +YE M + + + TYNT++
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI- 816
Query: 608 ARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
S YG L++ + + I+ + +++G YL+E I
Sbjct: 817 --SVYGRGLQLDKAIEIFSNARRSG-----LYLDEKI 846
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 161/393 (40%), Gaps = 68/393 (17%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLT--YTLNIY 299
+++I +I A LC + + + NQ PN+++ NSL+ ++++ ++
Sbjct: 50 DLHIAPKLISALSLC----RQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVF 105
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
MQ GL D +Y LLKAC + + + M+ H+E +G L D++ + +I
Sbjct: 106 SEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN---HIEKLG-LSSDIYVPNALIDC 161
Query: 360 FADAKLWQMALKVKHDMR--SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 417
++ L V+ M+ +TV+W+S++ AG + A +LF+EM +
Sbjct: 162 YSRCG----GLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM----PQ 213
Query: 418 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 477
+ +N +L + +AF F + + + + +T+ G
Sbjct: 214 RDLISWNTMLDGYARCREMSKAFELFE-----------------KMPERNTVSWSTMVMG 256
Query: 478 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 537
+S + D A+ + ++M + N +TW+I+I
Sbjct: 257 YSKA--------------------------GDMEMARVMFDKMPLP--AKNVVTWTIIIA 288
Query: 538 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 597
++ A ++ M +G+K D A + + C ES + ++ +K +
Sbjct: 289 GYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGS 348
Query: 598 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
N N LL +K G+ +++ ++ D+ K
Sbjct: 349 NAYVLNALLDMYAKCGN---LKKAFDVFNDIPK 378
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/328 (17%), Positives = 145/328 (44%), Gaps = 42/328 (12%)
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSY 314
G+ +R +++++ + ++ +N++++ R+++ +++ M + + S+
Sbjct: 199 GELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMP----ERNTVSW 250
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
+ ++ AG +++A+ M+ ++ +V T++ II +A+ L + A ++
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAK------NVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
M ++G+ + A S++ AC +GL+ +++ + + N N +L +
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 435 QYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 494
+AF F+ ++ +N+ L +H +G ++ S R P
Sbjct: 365 NLKKAFDVFNDIPKKDLV-----SWNTMLHGLGVHG-----HGKEAIELFSRMRREGIRP 414
Query: 495 TTSTYNTLLKAC--------GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 546
T+ +L +C G DY+++ K L P + L+D+ G ++
Sbjct: 415 DKVTFIAVLCSCNHAGLIDEGIDYFYSME-----KVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVC 574
AI+++++M ++P+V+ + + C
Sbjct: 470 EAIKVVQTM---PMEPNVVIWGALLGAC 494
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 227 ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK-ITPNIYVFNSLM 285
+ + LK+ G N Y+ A++D CG+ K+ ++ D+ + ++ N + +
Sbjct: 334 GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGV 393
Query: 286 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR 345
+ + ++ + ++ M+ G++PD ++ +L +C AG +D D + +E V
Sbjct: 394 HGHGKE---AIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYS---MEKVYD 447
Query: 346 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 405
L V Y ++ + + A+KV M + N V W +L+ AC V+ A
Sbjct: 448 LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDIAK 504
Query: 406 QLFEEML-LAGCEPNTQCFNIILHACVE 432
++ + ++ L C+P ++A E
Sbjct: 505 EVLDNLVKLDPCDPGNYSLLSNIYAAAE 532
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 143/365 (39%), Gaps = 66/365 (18%)
Query: 236 KHLDGPNMYIYRAIIDACGLC-GDFMKSRYIYEDLLNQKITPNI----YVFNSLMNVNSR 290
+ + P+ + + II C L + S+ + ++ + + P+ +VF + +
Sbjct: 72 RFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNG 131
Query: 291 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 350
DLT ++ GL D+ + N L++ + +D A ++ E + DV
Sbjct: 132 DLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE--------NPQRDV 183
Query: 351 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 410
TY+ +I A+ A ++ M + V+W+SLI+ A +AI+LF+E
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 411 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 470
M+ G +P+ L AC ++ W+ K +IH+
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQS----------GDWQKGK----------------AIHD 273
Query: 471 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE-MKTVGLSPNQ 529
T F +S L D+Y I+ M+ L ++
Sbjct: 274 YTKRKRLFIDS--------------------FLATGLVDFYAKCGFIDTAMEIFELCSDK 313
Query: 530 --ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 587
TW+ +I N E ++ + M +GIKPD + + + + C S +A L+
Sbjct: 314 TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLF 373
Query: 588 EEMKS 592
++M+S
Sbjct: 374 DQMRS 378
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 156/383 (40%), Gaps = 61/383 (15%)
Query: 241 PNMYIYRAIIDACG-LCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIY 299
P+ Y + ++ AC CG F + R I+ + + +++V N+L+NV R + +
Sbjct: 138 PDKYSFTFVLKACAAFCG-FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEI-AR 195
Query: 300 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 359
+++ + ++ D S+N LL A G VD A+ ++ E++ + +V +++ +I
Sbjct: 196 KVLDRMPVR-DAVSWNSLLSAYLEKGLVDEARALFDEME--------ERNVESWNFMISG 246
Query: 360 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE-P 418
+A A L + A +V M V V+W++++ A AH G + +++F +ML E P
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDV----VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 419 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 478
+ +L AC LGS L QG + +G
Sbjct: 303 DGFTLVSVLSACAS-------------------LGS--------LSQGEWVHVYIDKHGI 335
Query: 479 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDI 538
E F T Y+ CG KAL E+ + TW+ +I
Sbjct: 336 E-------IEGFLATALVDMYSK----CGK---IDKAL--EVFRATSKRDVSTWNSIISD 379
Query: 539 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC-EIHP 597
+ A+EI M G KP+ I + + C QA L+E M S + P
Sbjct: 380 LSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEP 439
Query: 598 NWVTYNTLLKARSKYGSVLEVQQ 620
Y ++ + G + E ++
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEE 462
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 151/359 (42%), Gaps = 49/359 (13%)
Query: 269 LLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR 326
+LN+ +PN + NS++ NS L +++ M + PD S+ +LKAC
Sbjct: 96 ILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCG 155
Query: 327 VDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTV 386
+ +++ L L DVF +T++ V+ + +++A KV M + V
Sbjct: 156 FEEG----RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAV 207
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS- 445
+W+SL++A GLV++A LF+EM E N + +N ++ A A F S
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSM 263
Query: 446 -------WKGNKMLGSFGE--GYNSNLK--QGSIHNATTVPNGFSNSQILSFTERFPFTP 494
W N M+ ++ YN L+ + ++T P+GF+ +LS
Sbjct: 264 PVRDVVSW--NAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLS--------- 312
Query: 495 TTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 554
++ +L + Y K G+ + L+D+ ++ A+E+ +
Sbjct: 313 ACASLGSLSQGEWVHVYIDKH--------GIEIEGFLATALVDMYSKCGKIDKALEVFR- 363
Query: 555 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
A K DV + + I K AL ++ EM PN +T+ +L A + G
Sbjct: 364 ---ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG 419
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 130/300 (43%), Gaps = 24/300 (8%)
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
L ++ M LG++P+ T++ I++ AC L + + K + R++L+ F +
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE----KRVRLNCFVKTA 304
Query: 356 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
++ + A + Q A ++ +++ G N V W+++I+ G + A QLF+ M
Sbjct: 305 LLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTM---- 357
Query: 416 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 475
+ N +N ++ Q A FF + +G+ + S+ +A
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFED------MIDYGDSKPDEVTMISVLSACGHM 411
Query: 476 NGFS-NSQILSFTERFPFTPTTSTYNTL--LKACGSDYYHAKALINEMKTVGLSPNQITW 532
I+ + + S Y +L + A G + + AK + +EMK + +++
Sbjct: 412 ADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK----ERDVVSY 467
Query: 533 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 592
+ L + + +L M D GI+PD + YT+ + C + K+ +++ +++
Sbjct: 468 NTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN 527
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 298 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 357
++ M +G+ PD +Y +L C L + ++ ++ E L+ DV+ ST++
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE----LQSDVYICSTLV 645
Query: 358 KVFAD-AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 416
+++ L L + +R + V W+++I AH G E+AIQLFE M+L
Sbjct: 646 DMYSKCGDLHDSRLMFEKSLRR-----DFVTWNAMICGYAHHGKGEEAIQLFERMILENI 700
Query: 417 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNAT 472
+PN F IL AC D+ +F+ K + L Y++ + K G + A
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA- 759
Query: 473 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 506
L PF + TLL C
Sbjct: 760 -----------LELIREMPFEADDVIWRTLLGVC 782
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 159/364 (43%), Gaps = 41/364 (11%)
Query: 281 FNSLMNVNSRDLTYTLNIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH 339
FN L +S T+ ++ ++ Q++G++P Y +++A G ++++E K
Sbjct: 183 FNKLQMYSS-----TIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKS 237
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
K Y+ + A + AL+V +M+ G+ ++ +S LI A A A
Sbjct: 238 QRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAR 297
Query: 400 LVEQAIQLFEEM----LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN--KMLG 453
V +LF+E LL E C ++L E GN L
Sbjct: 298 EVVITEKLFKEAGGKKLLKDPE---MCLKVVLMYVRE---------------GNMETTLE 339
Query: 454 SFGEGYNSNLKQG-----SIHNATTVPNGFSNS-QILSFTERFPFTPTTSTYNTLLKA-C 506
+ LK +I N + GF+ + ++ + + TY + A C
Sbjct: 340 VVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYC 399
Query: 507 GSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 565
+ Y+ A+ L +EM G + +S ++D+ G T + A+ ++ M G KP++
Sbjct: 400 RLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIW 459
Query: 566 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 625
Y + I + + + ++A +++EMK ++ P+ V+Y +++ A Y E+++C+ +Y
Sbjct: 460 IYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISA---YNRSKELERCVELY 516
Query: 626 QDMQ 629
Q+ +
Sbjct: 517 QEFR 520
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 136/310 (43%), Gaps = 23/310 (7%)
Query: 68 PLSPNHYARVASKLAQDIEMVLQEDPVDSGVNVELLA------KLVVLGIRGRNVWTVID 121
P S Y+ + A+ E+V+ E +LL K+V++ +R N+ T ++
Sbjct: 280 PESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLE 339
Query: 122 TLKKVQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARFQLPIRELVQP 181
+ ++ E+ ++ + + ++ + + AEAV++ E + + ++
Sbjct: 340 VVAAMRKAELKVTDCILCAIVNGFSKQ-------RGFAEAVKVYEWAMKEECEAGQVTYA 392
Query: 182 SDMIKRCVLSRNPKLAVRYASLLPHAH----ILFCNIISEFGKRRDLISALEAYDALKKH 237
+ C L + K + + ++ + + NI+ +GK R L A+ +K+
Sbjct: 393 IAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQR 452
Query: 238 LDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYT 295
PN++IY ++ID G D ++ I++++ K+ P+ + S+++ S++L
Sbjct: 453 GCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERC 512
Query: 296 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 355
+ +YQ + K D I++ R+D + +++K V +LD YS+
Sbjct: 513 VELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMK----VEGTRLDARLYSS 568
Query: 356 IIKVFADAKL 365
+ DA L
Sbjct: 569 ALNALRDAGL 578
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 175/428 (40%), Gaps = 61/428 (14%)
Query: 218 FGKRRDLISALEAYDALKKHLD-GPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKIT- 275
F K + S ++ +D LK+ + P+ Y I++A G+ K ++++ +Q+++
Sbjct: 183 FNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSF 242
Query: 276 -----PNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
+IY S L + + M++ G+ Y++L++A A V +
Sbjct: 243 LAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVIT 302
Query: 331 QDMYKELKHLESVGRLKL--DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
+ ++KE G KL D ++ ++ + L+V MR A + +
Sbjct: 303 EKLFKE------AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCIL 356
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
+++N + +A++++E + CE + I ++A +Y++A
Sbjct: 357 CAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKA--------- 407
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 508
+ML ++ +K+G F Y+ ++ G
Sbjct: 408 -EML------FDEMVKKG-------------------------FDKCVVAYSNIMDMYGK 435
Query: 509 DYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 566
+ A L+ +MK G PN ++ LID+ G ++ A +I K M A + PD ++
Sbjct: 436 TRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVS 495
Query: 567 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQ 626
YT+ I SK ++ + LY+E + + ++ SK + E+ + L Q
Sbjct: 496 YTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLL---Q 552
Query: 627 DMQKAGYK 634
DM+ G +
Sbjct: 553 DMKVEGTR 560
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 44/245 (17%)
Query: 197 AVRYASLLPHAHILFCNIISEFGKRRDLISALEAYD-ALKKHLDGPNMYIYRAIIDACGL 255
A+R A L IL C I++ F K+R A++ Y+ A+K+ + + AI C L
Sbjct: 343 AMRKAELKVTDCIL-CAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRL 401
Query: 256 CGDFMKSRYIYEDLLNQKI-----------------------------------TPNIYV 280
+ K+ ++++++ + PNI++
Sbjct: 402 -EKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWI 460
Query: 281 FNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK 338
+NSL++++ R DL I++ M+ + PD SY ++ A + ++ ++Y+E +
Sbjct: 461 YNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFR 520
Query: 339 HLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHA 398
+ R K+D ++ VF+ +++ DM+ G L+ +SS +NA A
Sbjct: 521 ----MNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDA 576
Query: 399 GLVEQ 403
GL Q
Sbjct: 577 GLNSQ 581
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 231 YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VN 288
+D LK+ PNM Y +++ + +++ I+ D+++ + P+I N ++ +
Sbjct: 286 FDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 344
Query: 289 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 348
S + + ++ +M++ G P++ SY I+++ C ++ A + + ++ L+
Sbjct: 345 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD----SGLQP 400
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
D Y+ +I F K ++ +M+ G + +++LI A+ + E +++
Sbjct: 401 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIY 460
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYD 437
+M+ EP+ FN+I+ + A Y+
Sbjct: 461 NKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/407 (19%), Positives = 166/407 (40%), Gaps = 42/407 (10%)
Query: 272 QKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
Q + +NS+M++ +R +++ + M GL M ++ I +KA A
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 246
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A +++ +K + K+ V T + ++ AKL + A +V D N + ++
Sbjct: 247 AVGIFELMKKY----KFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYT 301
Query: 390 SLINA-CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
L+N C L+E A +++ +M+ G +P+ N++L + + + A + FH K
Sbjct: 302 VLLNGWCRVRNLIE-AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
Query: 449 N---KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 505
+ S+ KQ S+ A + +S + P + Y L+
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL---------QPDAAVYTCLITG 411
Query: 506 CGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
G+ L+ EM+ G P+ T++ LI + + E I M I+P
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 623
+ + +K ++N++ +++EM I P+ +Y L++ G E +
Sbjct: 472 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR--- 528
Query: 624 IYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKKSEL 670
YLEE++++ + + D ++ A+F + E+
Sbjct: 529 ---------------YLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 560
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
++ M G+ D+ SY+I + C +G+ A +YKE+K R+KLDV Y+T+I+
Sbjct: 212 WKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSR----RMKLDVVAYNTVIR 267
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
++ + ++V +MR G N +++I G + A ++ +EM GC+P
Sbjct: 268 AIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQP 327
Query: 419 NT 420
++
Sbjct: 328 DS 329
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 56/282 (19%)
Query: 314 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA-KLWQMALKV 372
+N++L+ G ++ +K++ E V + D+F+YS + + + K W+ A+K+
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKM-DTEGVTK---DLFSYSIYMDIMCKSGKPWK-AVKL 246
Query: 373 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
+M+S + L+ VA++++I A + VE I++F EM GCEPN N I+ E
Sbjct: 247 YKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCE 306
Query: 433 ACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN----SQILSFTE 488
+ A+R + K+G ++ T FS S+ILS
Sbjct: 307 DGRMRDAYRML----------------DEMPKRGCQPDSITYMCLFSRLEKPSEILS--- 347
Query: 489 RFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGA 548
L M G+ P T+ +L+ ++
Sbjct: 348 ---------------------------LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPV 380
Query: 549 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 590
+ + K+M ++G PD AY I ++ A EEM
Sbjct: 381 LYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 474 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQIT 531
+ NGFS S T +N +L+ + K +M T G++ + +
Sbjct: 180 IGNGFSVS-------------NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFS 226
Query: 532 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+SI +DI + A+++ K M +K DV+AY T I+ S+ + + ++ EM+
Sbjct: 227 YSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMR 286
Query: 592 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
PN T+NT++K + G + + + L +M K G +P+
Sbjct: 287 ERGCEPNVATHNTIIKLLCEDGRMRDAYRML---DEMPKRGCQPD 328
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 511 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 570
+ A L EMK+ + + + ++ +I G ++ VE I + + M + G +P+V + T
Sbjct: 241 WKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTI 300
Query: 571 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 630
IK+ E + A + +EM P+ +TY L K + L+++ M +
Sbjct: 301 IKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI------LSLFGRMIR 354
Query: 631 AGYKPN-DYY--LEELIEEWCEGVIQ 653
+G +P D Y L E W G +Q
Sbjct: 355 SGVRPKMDTYVMLMRKFERW--GFLQ 378
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 231 YDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMN--VN 288
+D LK+ PNM Y +++ + +++ I+ D+++ + P+I N ++ +
Sbjct: 287 FDKLKERFT-PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR 345
Query: 289 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 348
S + + ++ +M++ G P++ SY I+++ C ++ A + + ++ L+
Sbjct: 346 SMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD----SGLQP 401
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 408
D Y+ +I F K ++ +M+ G + +++LI A+ + E +++
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIY 461
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYD 437
+M+ EP+ FN+I+ + A Y+
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFVARNYE 490
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 164/399 (41%), Gaps = 42/399 (10%)
Query: 280 VFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL 337
+NS+M++ +R +++ + M GL M ++ I +KA A A +++ +
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 338 KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CA 396
K + K+ V T + ++ AKL + A +V D N + ++ L+N C
Sbjct: 256 KKY----KFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCR 310
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN---KMLG 453
L+E A +++ +M+ G +P+ N++L + + + A + FH K +
Sbjct: 311 VRNLIEAA-RIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 369
Query: 454 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY-- 511
S+ KQ S+ A + +S + P + Y L+ G+
Sbjct: 370 SYTIMIRDFCKQSSMETAIEYFDDMVDSGL---------QPDAAVYTCLITGFGTQKKLD 420
Query: 512 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 571
L+ EM+ G P+ T++ LI + + E I M I+P + + +
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Query: 572 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 631
K ++N++ +++EM I P+ +Y L++ G E +
Sbjct: 481 KSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACR----------- 529
Query: 632 GYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKKSEL 670
YLEE++++ + + D ++ A+F + E+
Sbjct: 530 -------YLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 118/242 (48%), Gaps = 19/242 (7%)
Query: 212 CNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRY--IYEDL 269
IIS +GK +A + ++ + PN R+++ L + S+ + E+L
Sbjct: 113 ARIISLYGKAGMFENAQKVFEEM------PNRDCKRSVLSFNALLSAYRLSKKFDVVEEL 166
Query: 270 LNQ-----KITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC 322
N+ I P+I +N+L+ L + + ++N GLKPD+ ++N LL +
Sbjct: 167 FNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSY 226
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
+ G+ +L ++++ ++ + +D+ TY+ + A+ + + + +++++G+
Sbjct: 227 LKGQFELGEEIWAKMVE----KNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLK 282
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ +++++I + G +++A ++E++ G P+ F ++L A +A ++ A
Sbjct: 283 PDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Query: 443 FH 444
F
Sbjct: 343 FK 344
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 123/275 (44%), Gaps = 22/275 (8%)
Query: 192 RNPKLAVRYASLLPHAHILFCNIISEFGKRRDLISAL------EAYDALKKHLDGPNMYI 245
RNPK V + NI R L++A E + KK+ D
Sbjct: 52 RNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGF 111
Query: 246 YRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQN- 304
II G G F ++ ++E++ N+ ++ FN+L+ ++ L+ ++ + + N
Sbjct: 112 AARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALL--SAYRLSKKFDVVEELFNE 169
Query: 305 ----LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVF 360
L +KPD+ SYN L+KA C + A + L +E+ G LK D+ T++T++
Sbjct: 170 LPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL---LDEIENKG-LKPDIVTFNTLLLSS 225
Query: 361 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 420
+++ ++ M V ++ +++ + A+ ++ + LF E+ +G +P+
Sbjct: 226 YLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDV 285
Query: 421 QCFNIILHACVEACQYDRAFRFF-----HSWKGNK 450
FN ++ + + D A ++ H ++ +K
Sbjct: 286 FSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDK 320
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 27/289 (9%)
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
+ +I+ AG+ E A ++FEEM C+ + FN +L A + ++D F+ G
Sbjct: 113 ARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPG 172
Query: 449 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 508
+ YN+ +K ++ ++P + +L E P T+NTLL S
Sbjct: 173 KLSIKPDIVSYNTLIK--ALCEKDSLPEAVA---LLDEIENKGLKPDIVTFNTLLL---S 224
Query: 509 DYYHAKALINEMKTVGLSPNQITWSILIDICG------GTENVEGAIEILKSMGD---AG 559
Y + + E + + ++ IDI G N + E++ G+ +G
Sbjct: 225 SYLKGQFELGE----EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASG 280
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 619
+KPDV ++ I+ + +A Y+E+ P+ T+ LL A K G + +
Sbjct: 281 LKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG---DFE 337
Query: 620 QCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKKS 668
+ ++++ Y L++L++E +G RE E I K+
Sbjct: 338 SAIELFKETFSKRYLVGQTTLQQLVDELVKG---SKREEAEEIVKIAKT 383
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 168/388 (43%), Gaps = 61/388 (15%)
Query: 276 PNIYVFNSLMN--VNSRDLTYTLNIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
P+ ++FN+L+ S + ++ ++ ++M+ + PD S+ ++KA +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 333 MY-KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
M+ + LKH L+ +F +T+I ++ + A KV +M N VAW+++
Sbjct: 128 MHCQALKH-----GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQP----NLVAWNAV 178
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH------- 444
I AC V A ++F++ML+ N +N++L ++A + + A R F
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 445 -SWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE--RFPFTPTTSTYNT 501
SW S + G H NG N L F E R +P +
Sbjct: 235 VSW--------------STMIVGIAH------NGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 502 LLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 559
+L AC + K L ++ G S + LID+ NV A + + M +
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE-- 332
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 619
K ++++T+ I ++A+ L+ EM + + P+ +++ +LL A S G + E +
Sbjct: 333 -KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
Query: 620 QCLAIYQDMQKAGYKPNDYYLEELIEEW 647
+ +M++ Y++E IE +
Sbjct: 392 D---YFSEMKRV------YHIEPEIEHY 410
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 117/301 (38%), Gaps = 52/301 (17%)
Query: 241 PNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITP-NI----YVFNSLMNVNSR----- 290
PN+ + A+I AC D +R I++ +L + T N+ Y+ + R
Sbjct: 170 PNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM 229
Query: 291 ----DLTYTLNIYQI---------------MQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
D++++ I I +Q G+ P+ S +L AC +G + +
Sbjct: 230 PHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
++ +E G + V + +I +++ MA V M+ V+W+S+
Sbjct: 290 ILHG---FVEKAGYSWI-VSVNNALIDMYSRCGNVPMARLVFEGMQEKRC---IVSWTSM 342
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
I A G E+A++LF EM G P+ F +LHAC A + +F K
Sbjct: 343 IAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYH 402
Query: 452 LGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG 507
+ E Y + + G + A F + P PT + TLL AC
Sbjct: 403 IEPEIEHYGCMVDLYGRSGKLQKA------------YDFICQMPIPPTAIVWRTLLGACS 450
Query: 508 S 508
S
Sbjct: 451 S 451
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 177/422 (41%), Gaps = 54/422 (12%)
Query: 213 NIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQ 272
N++S + K + +A + +D + ++ + +I A +F + ++E+++
Sbjct: 63 NLLSLYLKTDGIWNARKLFDEMSHR----TVFAWTVMISAFTKSQEFASALSLFEEMMAS 118
Query: 273 KITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLA 330
PN + F+S++ RD++Y ++ + G + + + L G+ A
Sbjct: 119 GTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEA 178
Query: 331 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 390
+++ L++ D +++ +I A+ W+ AL+ +M AGV N +
Sbjct: 179 CELFSSLQNA--------DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVK 230
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
L+ A + GL E + +++ G I L+ ++ D +F +
Sbjct: 231 LLGASSFLGL-EFGKTIHSNIIVRG---------IPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGF-----SNSQILSFTE--RFPFTPTTSTYNTLL 503
+L S GE + T+V +GF + + +F E P TY+ +L
Sbjct: 281 VLNSSGEQ--------DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 504 KACGS----DYYHAKALINEMKTVGLSPNQITWSILIDI---CGGTENVEGAIEILKSMG 556
C + D+ K + ++ VG + + L+D+ C +E +E + G
Sbjct: 333 SLCSAVRSLDF--GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE-----VEASRVFG 385
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 616
A + P+V+++TT I V+ + L EM E+ PN VT + +L+A SK V
Sbjct: 386 -AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVR 444
Query: 617 EV 618
V
Sbjct: 445 RV 446
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 387 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS- 445
AW+ +I+A + A+ LFEEM+ +G PN F+ ++ +C R S
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV 150
Query: 446 ----WKGNKMLG-SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT------------- 487
++GN ++G S + Y+ K G A + + N+ +S+T
Sbjct: 151 IKTGFEGNSVVGSSLSDLYS---KCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 488 ERFPF---------TPTTSTYNTLLKAC---GSDYYHAKALINEMKTVGLSPNQITWSIL 535
E F P T+ LL A G ++ K + + + G+ N + + L
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEF--GKTIHSNIIVRGIPLNVVLKTSL 265
Query: 536 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 595
+D +E A+ +L S G+ DV +T+ + V + K+A+ + EM+S +
Sbjct: 266 VDFYSQFSKMEDAVRVLNSSGE----QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 596 HPNWVTYNTLLK----ARS-KYGSVLEVQQCLAIYQDMQKAGYKPNDYYLE 641
PN TY+ +L RS +G + Q ++D G D Y++
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 165/425 (38%), Gaps = 89/425 (20%)
Query: 226 SALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
SAL+ + +++ P+ + +I C + G + + ++ +L + I + ++L+
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 286 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH------ 339
+ S+ + Y + +++ K DM ++ L+ C G+ A ++ ++K
Sbjct: 416 TLYSK-CGCDPDAYLVFKSMEEK-DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 340 ---------------LESV------------GRLKLDVFTYSTIIKVFADAKLWQMALKV 372
LE++ L L+VF S++I +++ L +MALKV
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 373 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
M + N VAW+S+I+ + L E +I LF ML G P++ +L A
Sbjct: 534 FTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISS 589
Query: 433 ACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 492
S LK S+H +T R
Sbjct: 590 TA--------------------------SLLKGKSLHG---------------YTLRLGI 608
Query: 493 TPTTSTYNTLLK---ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
T N L+ CG Y A+ + +M+ L ITW+++I G + A+
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKY-AENIFKKMQHKSL----ITWNLMIYGYGSHGDCITAL 663
Query: 550 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK-SCEIHPNWVTYNTLLKA 608
+ M AG PD + + + I C S ++ ++E MK I PN Y ++
Sbjct: 664 SLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDL 723
Query: 609 RSKYG 613
+ G
Sbjct: 724 LGRAG 728
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 170/394 (43%), Gaps = 51/394 (12%)
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQI 301
+++ A I CGD +R +++ + ++ +N L+N + + + +Y++
Sbjct: 192 HVHNASIHMFASCGDMENARKVFD----ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M++ G+KPD + L+ +C + G ++ ++ Y+ +K L++ + + ++ +F+
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE----NGLRMTIPLVNALMDMFS 303
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
A ++ ++ + V+W+++I+ A GL++ + +LF++M E +
Sbjct: 304 KCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLFDDME----EKDVV 355
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 481
+N ++ V+A +G L F E SN K I T + + S
Sbjct: 356 LWNAMIGGSVQA------------KRGQDALALFQEMQTSNTKPDEI---TMIHCLSACS 400
Query: 482 Q---------ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV--GL-SPNQ 529
Q I + E++ + + +L+ D Y I+E +V G+ + N
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLV-----DMYAKCGNISEALSVFHGIQTRNS 455
Query: 530 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
+T++ +I + AI M DAGI PD I + + C + + +
Sbjct: 456 LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ 515
Query: 590 MKS-CEIHPNWVTYNTLLKARSKYGSVLEVQQCL 622
MKS ++P Y+ ++ + G + E + +
Sbjct: 516 MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 144/346 (41%), Gaps = 60/346 (17%)
Query: 275 TPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGL---KPDMTSYNILLKACCVAGRVDL 329
PNI+ +N + S + + +Y+ M G +PD +Y +L K C + L
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC---ADLRL 171
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
+ + L H+ + RL+L ++ I +FA + A KV + V + V+W+
Sbjct: 172 SSLGHMILGHVLKL-RLELVSHVHNASIHMFASCGDMENARKV---FDESPVR-DLVSWN 226
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 449
LIN G E+AI +++ M G +P+ ++ + V +C
Sbjct: 227 CLINGYKKIGEAEKAIYVYKLMESEGVKPD----DVTMIGLVSSCS-------------- 268
Query: 450 KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD 509
MLG +L +G NG + P + + CG D
Sbjct: 269 -MLG--------DLNRGKEFYEYVKENGLRMT-----------IPLVNALMDMFSKCG-D 307
Query: 510 YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT 569
+ A+ + + ++ + ++W+ +I G G +++ + + D + DV+ +
Sbjct: 308 IHEARRIFDNLEKRTI----VSWTTMIS---GYARC-GLLDVSRKLFDDMEEKDVVLWNA 359
Query: 570 AIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
I V++K + AL L++EM++ P+ +T L A S+ G++
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/353 (18%), Positives = 145/353 (41%), Gaps = 39/353 (11%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
+I+ + K + A+ Y ++ P+ ++ +C + GD + + YE +
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 274 ITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
+ I + N+LM++ S+ D+ I+ ++ K + S+ ++ G +D+++
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLE----KRTIVSWTTMISGYARCGLLDVSR 343
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
++ +++ + DV ++ +I AK Q AL + +M+++ + +
Sbjct: 344 KLFDDME--------EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHC 395
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 451
++AC+ G ++ I + + N ++ + A FH +
Sbjct: 396 LSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNS 455
Query: 452 LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC----- 506
L Y + + ++H + + N I + P T+ LL AC
Sbjct: 456 L-----TYTAIIGGLALHGDASTAISYFNEMIDA-----GIAPDEITFIGLLSACCHGGM 505
Query: 507 ---GSDYYHAKALINEMKT-VGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
G DY+ ++MK+ L+P +SI++D+ G +E A +++SM
Sbjct: 506 IQTGRDYF------SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 169/396 (42%), Gaps = 33/396 (8%)
Query: 227 ALEAYD-ALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLM 285
A+E Y L + N ++Y A++ ACGL GD +YE + + + ++ + NS++
Sbjct: 90 AIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVV 149
Query: 286 NV---NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLES 342
++ N R + + +I L+P TS+N L+ C AG +D A ++ +
Sbjct: 150 DMYVKNGRLIEANSSFKEI-----LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP---- 200
Query: 343 VGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 402
+ +V +++ +I F D K AL+ M+ G+ L+ A + AC+ GL+
Sbjct: 201 ----QPNVVSWNCLISGFVD-KGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLT 255
Query: 403 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 462
QL ++ +G E + + ++ A FH K + S +NS
Sbjct: 256 MGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK--LAVNSSVAVWNSM 313
Query: 463 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKT 522
L G + N + QI F + T + LK C +Y + + +
Sbjct: 314 L-SGFLINEENEAALWLLLQIYQSDLCFD----SYTLSGALKIC-INYVNLRLGLQVHSL 367
Query: 523 V---GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 579
V G + I SIL+D+ N++ A ++ + + D+IA++ I+ CV+S
Sbjct: 368 VVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN----KDIIAFSGLIRGCVKSGF 423
Query: 580 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
A L+ E+ + + + +LK S S+
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASL 459
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 158/382 (41%), Gaps = 59/382 (15%)
Query: 248 AIIDACGLCGDFMKSRYIYEDLLNQK---ITPNIYVFNSLMN---VNSRDLTYTLNIYQI 301
A+ID CG + + D+ +Q+ + ++ V+NS+++ +N + + QI
Sbjct: 278 ALIDMYSNCGSLIYA----ADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQI 333
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
Q+ L D + + LK C V+L + ++ L V +LD S ++ + A
Sbjct: 334 YQS-DLCFDSYTLSGALKICI--NYVNLRLGL--QVHSLVVVSGYELDYIVGSILVDLHA 388
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ Q A K+ H + N + +A+S LI C +G A LF E++ G + +
Sbjct: 389 NVGNIQDAHKLFHRLP----NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQF 444
Query: 422 CFNIILHACVEACQYDRAFRFFHSWKGNKMLG-SFGEGYNSN-----------LKQGSIH 469
+ IL C W G ++ G +GY S +K G I
Sbjct: 445 IVSNILKVCSSLASL--------GW-GKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
Query: 470 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQ 529
N + +G ++S+T + Y+H +M +G+ PN+
Sbjct: 496 NGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFR-----YFH------KMINIGIEPNK 544
Query: 530 ITWSILIDIC---GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 586
+T+ L+ C G E +E +KS + G++P + Y + + ++ F++A L
Sbjct: 545 VTFLGLLSACRHSGLLEEARSTLETMKS--EYGLEPYLEHYYCVVDLLGQAGLFQEANEL 602
Query: 587 YEEMKSCEIHPNWVTYNTLLKA 608
+M + P+ + +LL A
Sbjct: 603 INKMP---LEPDKTIWTSLLTA 621
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/405 (19%), Positives = 162/405 (40%), Gaps = 58/405 (14%)
Query: 253 CGLCGDFMKSRYIYEDLLNQKITPNIYVFNSL--MNVNSRDLTYTLNIYQIM--QNLGLK 308
CG F + I ++ Q I+ N+++ N++ M V+ R L+ ++ M +N+
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 309 PDMTS------------------------------YNILLKACCVAGRVDLAQDMYKELK 338
M S Y+ +LKAC + G + L +Y
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY---- 130
Query: 339 HLESVGR--LKLDVFTYSTIIKVFA-DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINAC 395
E +G+ L+ DV ++++ ++ + +L + K +R + + +W++LI+
Sbjct: 131 --ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPS-----STSWNTLISGY 183
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF 455
AGL+++A+ LF M +PN +N ++ V+ RA F + ++
Sbjct: 184 CKAGLMDEAVTLFHRM----PQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLD- 237
Query: 456 GEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA 515
G LK S T+ + S E PF S + CGS Y A
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPF--AISALIDMYSNCGSLIYAADV 295
Query: 516 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 575
E + ++ + W+ ++ E E A+ +L + + + D + A+K+C+
Sbjct: 296 FHQE--KLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 576 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 620
N + L ++ + +++ + L+ + G++ + +
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHK 398
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 124/277 (44%), Gaps = 16/277 (5%)
Query: 173 LPIRELVQPSDMIKRCVLSRNPKLAVRYASLLPHAHILFCN-IISEFGKRRDLISALEAY 231
+P + V + M+ LS + A + ++P ++ CN +I FG+ ++ A +
Sbjct: 229 MPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVF 288
Query: 232 DALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR- 290
D ++ + +R +I A G +++ ++ + Q + P+ S+++V +
Sbjct: 289 DLMEDRDNA----TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATL 344
Query: 291 -DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 349
L Y ++ + D+ ++L+ G + A+ ++ D
Sbjct: 345 ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS--------SKD 396
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 409
+ +++II +A L + ALK+ H+M S+G N V +++ AC++AG +E+ +++FE
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 410 EMLLAGC-EPNTQCFNIILHACVEACQYDRAFRFFHS 445
M C P + ++ + A Q D+A S
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 139/335 (41%), Gaps = 33/335 (9%)
Query: 224 LISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNS 283
L S +E+YD + + ++I CG ++ ++E + N+ + +NS
Sbjct: 375 LFSEVESYDTI----------LLNSMIKVYFSCGRIDDAKRVFERIENKSLIS----WNS 420
Query: 284 LMNVNSRD--LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE 341
+ N S++ TL + M L L D S + ++ AC ++L + ++
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR----A 476
Query: 342 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 401
++ L D S++I ++ + +V M V + V W+S+I+ A G
Sbjct: 477 TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM----VKSDEVPWNSMISGYATNGQG 532
Query: 402 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 461
+AI LF++M +AG P F ++L AC + + F S K + G+
Sbjct: 533 FEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVD-------HGFVP 585
Query: 462 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMK 521
+ + S G+ I + E PF S ++++L+ C ++ Y A K
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAI-NLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEK 644
Query: 522 TVGLSP-NQITWSILIDICGGTENVEGAIEILKSM 555
+ L P N + + L I + + E + + K M
Sbjct: 645 IIELEPENSVAYVQLSAIFATSGDWESSALVRKLM 679
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 142/329 (43%), Gaps = 48/329 (14%)
Query: 276 PNIYVFNSLMNVNSRDLTYTLNI---YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQD 332
P++ + ++++ S++ Y + Y + + GL PD +++ +L AC R+ ++
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 333 MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
++ +L +G +V S+++ ++ + A +V + M N+V+WS+L+
Sbjct: 287 IHGKLI-TNGIGS---NVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALL 338
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC----------QYDRAFRF 442
G E+AI++F EM E + CF +L AC QY R F
Sbjct: 339 GGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 502
+ + ++ +G K G I +A+ V + S ++ T+N +
Sbjct: 395 GNVIVESALIDLYG-------KSGCIDSASRVYSKMSIRNMI-------------TWNAM 434
Query: 503 LKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA-G 559
L A + A + N+M G+ P+ I++ ++ CG T V+ M + G
Sbjct: 435 LSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYG 494
Query: 560 IKPDVIAYTTAIKVCVESKNFKQALTLYE 588
IKP Y+ I + + F++A L E
Sbjct: 495 IKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 108/247 (43%), Gaps = 19/247 (7%)
Query: 199 RYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGD 258
R L+P F +++ G R L E + L + G N+ + +++D G CG
Sbjct: 257 RGKGLVPDGST-FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS 315
Query: 259 FMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNI 316
++R ++ + + N +++L+ ++ + + I++ M+ + D+ +
Sbjct: 316 VREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGT 367
Query: 317 LLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM 376
+LKAC V L ++++ + G +V S +I ++ + A +V M
Sbjct: 368 VLKACAGLAAVRLGKEIHGQYVRRGCFG----NVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
N + W+++++A A G E+A+ F +M+ G +P+ F IL AC
Sbjct: 424 SIR----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMV 479
Query: 437 DRAFRFF 443
D +F
Sbjct: 480 DEGRNYF 486
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 310 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 369
D ++N+++ C +D A++++ + DV T++ +I + + + A
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFT--------EKDVVTWNAMISGYVNCGYPKEA 259
Query: 370 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
L + +MR AG + + V SL++ACA G +E +L I+ A
Sbjct: 260 LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH--------------IYILETA 305
Query: 430 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 489
V + Y G + + + Y K GSI A V G + +
Sbjct: 306 SVSSSIY----------VGTPIWNALIDMY---AKCGSIDRAIEVFRGVKDRDL------ 346
Query: 490 FPFTPTTSTYNTLLKACGSDYYHAKA---LINEMKTVGLSPNQITWSILIDICGGTENVE 546
ST+NTL+ G +HA+ + EM+ + + PN++T+ +I C + V+
Sbjct: 347 -------STWNTLI--VGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVD 397
Query: 547 GAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 605
+ M D I+P++ Y + + + ++A E MK I PN + + TL
Sbjct: 398 EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTL 454
Query: 606 LKARSKYGSV 615
L A YG+V
Sbjct: 455 LGACKIYGNV 464
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 134/311 (43%), Gaps = 39/311 (12%)
Query: 207 AH-ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYI 265
AH + + ++ S + KR + A+ +D + + + +I C C + +R
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSAR-- 229
Query: 266 YEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
+L ++ ++ +N++++ VN L I++ M++ G PD+ + LL AC V
Sbjct: 230 --ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 324 AGRVDLAQDMYKELKHLESV-GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
G ++ + ++ + SV + + ++ +I ++A A++V ++ +
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR--D 345
Query: 383 LNTVAWSSLINACA--HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 440
L+T W++LI A HA E +I++FEEM PN F ++ AC + + D
Sbjct: 346 LST--WNTLIVGLALHHA---EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR 400
Query: 441 RFFHSWKGNKMLGSFGEGYN--SNLKQGSIHNATTVPNGFSNSQI---LSFTERFPFTPT 495
++F + + YN N+K H V Q+ F E P
Sbjct: 401 KYFSLMR---------DMYNIEPNIK----HYGCMVDMLGRAGQLEEAFMFVESMKIEPN 447
Query: 496 TSTYNTLLKAC 506
+ TLL AC
Sbjct: 448 AIVWRTLLGAC 458
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/445 (19%), Positives = 196/445 (44%), Gaps = 66/445 (14%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQK 273
+I E K + A + +D L + ++ + +I GD ++R +++ + ++K
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARELFDRVDSRK 107
Query: 274 ITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ 331
N+ + ++++ + S+ L+ ++Q M + ++ S+N ++ +GR+D A
Sbjct: 108 ---NVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKAL 160
Query: 332 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 391
+++ E+ + ++ ++++++K A+ + M V V+W+++
Sbjct: 161 ELFDEMP--------ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAM 208
Query: 392 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH------- 444
++ A G V++A +LF+ M E N +N ++ + + D A + F
Sbjct: 209 VDGLAKNGKVDEARRLFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF 264
Query: 445 -SWKGNKMLGSFGEGYNSN--------LKQGSIHNATTVPNGF----SNSQILSFTERF- 490
SW N M+ F N + + ++ + TT+ G+ N + L+ +
Sbjct: 265 ASW--NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 491 ---PFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 545
P TY ++L AC + + + + N+I S L+++ +
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKS--- 379
Query: 546 EGAIEILKSMGDAGI--KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 603
G + + M D G+ + D+I++ + I V + K+A+ +Y +M+ P+ VTY
Sbjct: 380 -GELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYL 438
Query: 604 TLLKARSKYGSVLEVQQCLAIYQDM 628
LL A S G V++ + ++D+
Sbjct: 439 NLLFACSHAGL---VEKGMEFFKDL 460
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 191/432 (44%), Gaps = 66/432 (15%)
Query: 152 MVMSGHIAEAVELMEVLARFQLPIRELVQPSDMIKRCVLSRNPKL--AVRYASLLPHAHI 209
+V G I EA+ L E ++P R++V + M+ L++N K+ A R +P +I
Sbjct: 181 LVQRGRIDEAMNLFE-----RMPRRDVVSWTAMVDG--LAKNGKVDEARRLFDCMPERNI 233
Query: 210 LFCN-IISEFGKRRDLISALEAYDAL-KKHLDGPNMYIY-----RAIIDACGLCGDFMKS 262
+ N +I+ + + + A + + + ++ N I R + ACGL
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLF------ 287
Query: 263 RYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIY-QIMQNLGLKPDMTSYNILLK 319
D + +K N+ + +++ V +++ LN++ +++++ +KP++ +Y +L
Sbjct: 288 -----DRMPEK---NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 320 ACC-VAGRVD---LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHD 375
AC +AG V+ + Q + K + + L + YS ++ A K++ L + D
Sbjct: 340 ACSDLAGLVEGQQIHQLISKSVHQKNEIVTSAL-LNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 376 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 435
+ ++W+S+I AH G ++AI+++ +M G +P+ + +L AC A
Sbjct: 399 L---------ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGL 449
Query: 436 YDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFP 491
++ FF ++ L E Y + + G + + T F N + F
Sbjct: 450 VEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTN----FINCDDARLSRSF- 504
Query: 492 FTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
Y +L AC ++ AK ++ ++ G S + T+ ++ +I E A
Sbjct: 505 -------YGAILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIYAANGKREEAA 556
Query: 550 EILKSMGDAGIK 561
E+ M + G+K
Sbjct: 557 EMRMKMKEKGLK 568
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 147/354 (41%), Gaps = 33/354 (9%)
Query: 218 FGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPN 277
F RDL AL+ + + + + A+I+ G CG + ++ +++D Q N
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ----N 302
Query: 278 IYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK 335
I++ ++M+ +D ++ LN++ M + P+ ++ ILL + +L+
Sbjct: 303 IFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSI-----AELSLLKQG 357
Query: 336 ELKH-LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 394
+L H L + V + ++ ++A + + A K M + V W+++I+
Sbjct: 358 DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI----VTWNTMISG 413
Query: 395 CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS 454
C+H GL +A++ F+ M+ G PN F +L AC ++ +F N+++
Sbjct: 414 CSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYF-----NQLMKK 468
Query: 455 FGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF----PFTPTTSTYNTLLKACG-SD 509
F Q I + T + S + + E F P + TLL AC
Sbjct: 469 FD-------VQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRR 521
Query: 510 YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
Y + E + + +L +I + EG ++ M + G+K +
Sbjct: 522 NYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE 575
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 153/387 (39%), Gaps = 51/387 (13%)
Query: 204 LPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSR 263
L HA I+ +++ G +DL + +++ G + + A+++ CG ++R
Sbjct: 216 LDHATIV--SMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 264 YIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
++++ + + + + N D+ L + ++MQ G++P+ + L+ C
Sbjct: 274 FVFDRMERRDVITWTCMINGY--TEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
A +V+ K L ++ D+ +++I ++A K + +V S
Sbjct: 332 ALKVNDG----KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV----FSGASKY 383
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 443
+T WS++I C LV A+ LF+ M EPN N +L A
Sbjct: 384 HTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL---------- 433
Query: 444 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 503
++L+Q + GF +S T +
Sbjct: 434 -----------------ADLRQAMNIHCYLTKTGFMSS----------LDAATGLVHVYS 466
Query: 504 KACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 563
K CG+ A + N ++ S + + W LI G + A+++ M +G+ P+
Sbjct: 467 K-CGT-LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPN 524
Query: 564 VIAYTTAIKVCVESKNFKQALTLYEEM 590
I +T+A+ C S ++ LTL+ M
Sbjct: 525 EITFTSALNACSHSGLVEEGLTLFRFM 551
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 209 ILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDAC---GLCGDFMKSRYI 265
I+ ++IS + K + + + K+ GP + AII C L D + +
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGCVQNELVSDALG---L 407
Query: 266 YEDLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
++ + + + PNI NSL+ + DL +NI+ + G + + L+
Sbjct: 408 FKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
G ++ A ++ ++ DV + +I + AL+V +M +GV
Sbjct: 468 CGTLESAHKIFNGIQEKHK----SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTP 523
Query: 384 NTVAWSSLINACAHAGLVEQAIQLFEEML 412
N + ++S +NAC+H+GLVE+ + LF ML
Sbjct: 524 NEITFTSALNACSHSGLVEEGLTLFRFML 552
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 32/226 (14%)
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF 455
++G+ E A +LF+EM CE + FN +L A V + + D A + F +
Sbjct: 133 GYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPD 192
Query: 456 GEGYNSNLK----QGSIHNATTV-----PNGFS------NSQILSFTERFPF-------- 492
YN+ +K +GS+ + ++ NGF N+ + F R F
Sbjct: 193 LVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWD 252
Query: 493 -------TPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTE 543
+P +YN+ ++ + + A LI+ MKT G+SP+ T++ LI
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 589
N+E ++ M + G+ PD + Y I + + + +A+ + EE
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 278 IYVFNSLMN--VNSRDLTYTLNIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMY 334
+ FN+L++ VNS+ L + + ++ + LG+ PD+ +YN ++KA C G +D D+
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMD---DIL 213
Query: 335 KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 394
+ LE G + D+ +++T+++ F +L+ ++ M+S ++ N +++S +
Sbjct: 214 SIFEELEKNG-FEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 395 CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
A+ L + M G P+ +N ++ A
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 22/266 (8%)
Query: 200 YASLLPHAHILF-------CN--------IISEFGKRRDLISALEAYDALKKHLD-GPNM 243
Y+ + HAH LF C ++S + + L A++ + L + L P++
Sbjct: 134 YSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDL 193
Query: 244 YIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLN--IYQI 301
Y +I A G I+E+L P++ FN+L+ R + I+ +
Sbjct: 194 VTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL 253
Query: 302 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 361
M++ L P++ SYN ++ + A ++ +K + DV TY+ +I +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMK----TEGISPDVHTYNALITAYR 309
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 421
+ +K ++M+ G+ +TV + LI G +++A+++ EE +
Sbjct: 310 VDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN 369
Query: 422 CFNIILHACVEACQYDRAFRFFHSWK 447
+ ++ + A + D A + + K
Sbjct: 370 MYKPVVERLMGAGKIDEATQLVKNGK 395
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 50/221 (22%)
Query: 495 TTSTYNTLLKACGSDYYHAKALINEMKT-------VGLSPNQITWSILIDICGGTENVEG 547
T ++N LL A Y ++K L MKT +G++P+ +T++ +I +++
Sbjct: 156 TVKSFNALLSA----YVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD 211
Query: 548 AIEILKSMGDAGIKPDVI-----------------------------------AYTTAIK 572
+ I + + G +PD+I +Y + ++
Sbjct: 212 ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271
Query: 573 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
+K F AL L + MK+ I P+ TYN L+ A ++ EV +C Y +M++ G
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC---YNEMKEKG 328
Query: 633 YKPNDYYLEELIEEWCEGVIQDNREYQAEFSSIKKSELERP 673
P+ LI C+ D R + +IK L RP
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLD-RAVEVSEEAIKHKLLSRP 368
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 131/307 (42%), Gaps = 19/307 (6%)
Query: 310 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 369
D++ YN + + R L +D+Y ++K L+ V + D+F +S ++ A+L A
Sbjct: 40 DLSEYNTAVNSVTAQRRHYLLRDVYDDMK-LDGV-QPTADIF-HSFVVGTMKGARLSD-A 95
Query: 370 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 429
+ +M++ G+ + ++ LI+ C ++AI++++EM +PN Q F +L+A
Sbjct: 96 FFFREEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNA 155
Query: 430 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH---NATTVPNGFSNSQILSF 486
C + Q D + + + G G N G I N P+ S ++IL F
Sbjct: 156 CAVSGQLDLVYAIVRD------MTAAGVGLNQFCYAGLITAHLNKQPRPDNLS-TKILEF 208
Query: 487 TERFPF-----TPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGG 541
E+ + S + + + Y+ +T L N + +
Sbjct: 209 VEQSKGWSAIDSSRKSAEDVMFSISEEELYNIPTADYSHRTRFLQRNLTVYHVAFSALAD 268
Query: 542 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
++V+ +L+ + G D ++ + S++F+ L L+++ S + P
Sbjct: 269 LKDVKATEALLEMLKKDGKDTDTYCMLQIMRCYLHSQDFENGLKLFQDYMSADKIPAMEL 328
Query: 602 YNTLLKA 608
Y TL++
Sbjct: 329 YTTLIEG 335
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Query: 497 STYNTLLKACGSD--YYHAKALINEMKTVGLSPN-QITWSILIDICGGTENVEGAIEILK 553
S YNT + + + +Y + + ++MK G+ P I S ++ G + A +
Sbjct: 42 SEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGAR-LSDAFFFRE 100
Query: 554 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 613
M GI PDV Y I C + KN K+A+ +Y+EMK ++ PN T+ LL A + G
Sbjct: 101 EMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSG 160
Query: 614 SVLEVQQCLAIYQDMQKAGYKPNDYYLEELI 644
++ AI +DM AG N + LI
Sbjct: 161 ---QLDLVYAIVRDMTAAGVGLNQFCYAGLI 188
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 104/218 (47%), Gaps = 18/218 (8%)
Query: 257 GDFMKSRYIYEDLLNQKITPNIYVFNSLM----NVNSRDLTYTLNIYQIMQNLGLKPDMT 312
G K+ ++ +L Q I PN S++ + S DL L+ + I Q L +
Sbjct: 500 GHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA 559
Query: 313 SYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 372
S L+ AG + A+DM+ + K SV TY+T+I + + + A+ +
Sbjct: 560 S--ALVDMYSKAGAIKYAEDMFSQTKERNSV--------TYTTMILGYGQHGMGERAISL 609
Query: 373 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML-LAGCEPNTQCFNIILHACV 431
M+ +G+ + + + ++++AC+++GL+++ +++FEEM + +P+++ + I
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLG 669
Query: 432 EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 469
+ + A+ F KG G+ E + S L +H
Sbjct: 670 RVGRVNEAYEFV---KGLGEEGNIAELWGSLLGSCKLH 704
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 136/328 (41%), Gaps = 57/328 (17%)
Query: 276 PNIYVFNSLMNVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
P+ ++FNS++ S R + + Y+ M + + P ++ ++K+C DL+
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC-----ADLSALR 124
Query: 334 YKELKHLESV-GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI 392
+ H +V LD + + ++ ++ + A +V M + VAW+SL+
Sbjct: 125 IGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSI----VAWNSLV 180
Query: 393 NACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 452
+ GL ++AIQ+F +M +G EP++ F +L AC + SW ++
Sbjct: 181 SGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVS-----LGSWVHQYII 235
Query: 453 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH 512
EG + N+K G T + N +S CG D
Sbjct: 236 ---SEGLDLNVKLG-----TALINLYSR-------------------------CG-DVGK 261
Query: 513 AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAI 571
A+ + ++MK N W+ +I G + A+E+ M D G P+ + + +
Sbjct: 262 AREVFDKMK----ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVL 317
Query: 572 KVCVESKNFKQALTLYEEM-KSCEIHPN 598
C + ++ ++Y+ M KS + P
Sbjct: 318 SACAHAGLVEEGRSVYKRMTKSYRLIPG 345
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 160/371 (43%), Gaps = 53/371 (14%)
Query: 299 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 358
Y+ M + G++PD +Y +LKAC V + ++ ++ V K ++ + +I
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE----VSSYKSSLYVCNALIS 187
Query: 359 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 418
++ + +A ++ M + V+W+++IN A G+ +A +LF++M +G E
Sbjct: 188 MYKRFRNMGIARRLFDRM----FERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 419 NTQCFNIILHACVEACQYDRAF------RFFHS----------WKGNKMLGSFGEGYNSN 462
+ +NII C++ Y A R F + K ++G+ G
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLG--KE 301
Query: 463 LKQGSIHNATTVPNGFSNSQILSFTE---------RFPFTPTTS--TYNTLLKACG--SD 509
+ +IH++ + N+ I +++ F T S T+N+++ +
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 510 YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE----ILKSMGDAGIKPDVI 565
A L+ EM G PN IT + ++ +C N++ E IL+ K +
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR---KCFKDYTM 418
Query: 566 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 625
+ + + V +S A + + M + VTY +L+ YG+ E LA++
Sbjct: 419 LWNSLVDVYAKSGKIVAAKQVSDLMSK----RDEVTYTSLIDG---YGNQGEGGVALALF 471
Query: 626 QDMQKAGYKPN 636
++M ++G KP+
Sbjct: 472 KEMTRSGIKPD 482
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 171/414 (41%), Gaps = 38/414 (9%)
Query: 212 CN-IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
CN +IS + + R++ A +D + + + + A+I+ G + ++ +++ +
Sbjct: 182 CNALISMYKRFRNMGIARRLFDRMFER----DAVSWNAVINCYASEGMWSEAFELFDKMW 237
Query: 271 NQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
+ ++ +N + + + + L + M+N D + I LKAC + G +
Sbjct: 238 FSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIR 297
Query: 329 LAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 388
L ++++ H G + +T+I +++ K + AL V R N + W
Sbjct: 298 LGKEIHGLAIHSSYDGIDNVR----NTLITMYSKCKDLRHALIV---FRQTEEN-SLCTW 349
Query: 389 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 448
+S+I+ A E+A L EML+AG +PN+ IL C F
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 449 NKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK 504
K + +NS + K G I A V S ++S + TY +L+
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQV------SDLMSKRDEV-------TYTSLID 456
Query: 505 ACGSDYYH--AKALINEMKTVGLSPNQITWSILIDICGGTENV-EGAIEILKSMGDAGIK 561
G+ A AL EM G+ P+ +T ++ C ++ V EG +K + GI+
Sbjct: 457 GYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIR 516
Query: 562 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
P + ++ + + + +A + M P+ T+ TLL A +G+
Sbjct: 517 PCLQHFSCMVDLYGRAGFLAKAKDIIHNMP---YKPSGATWATLLNACHIHGNT 567
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 175/418 (41%), Gaps = 57/418 (13%)
Query: 259 FMKSRYIYEDLLNQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNI 316
F +++Y Y L + PNI+++NSL+N VN+ TL+++ ++ GL ++ +
Sbjct: 58 FRQTKYSYL-LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPL 116
Query: 317 LLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM 376
+LKAC A L D++ L DV ++++ +++ + A K+ ++
Sbjct: 117 VLKACTRASSRKLGIDLHS----LVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172
Query: 377 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 436
V V W++L + +G +AI LF++M+ G +P++ +L ACV
Sbjct: 173 PDRSV----VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDL 228
Query: 437 DRA---FRFFHSWKGNKMLGSFGEGYNSNL--KQGSIHNATTVPNGFSNSQILSFTERFP 491
D ++ + K SF NL K G + A +V + I+
Sbjct: 229 DSGEWIVKYMEEMEMQK--NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIV------- 279
Query: 492 FTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAI 549
T++T+++ S+ + + L +M L P+Q + + C GA+
Sbjct: 280 ------TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL----GAL 329
Query: 550 EILKSMGDAGIK--------PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 601
+ +G+ GI ++ I + + + +++EMK +I V
Sbjct: 330 D----LGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI----VI 381
Query: 602 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN-DYYLEELIEEWCEGVIQDNREY 658
N + +K G V+ A++ +K G P+ +L L G+IQD +
Sbjct: 382 MNAAISGLAKNG---HVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ--YDRAF-RFFH--- 444
+I ACA G ++++ F EM G + + I+ + ++A + DR F + H
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDA----FIVPSLLKASRNLLDREFGKMIHCLV 143
Query: 445 ---SWKGNKML-GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 500
S++ + + S + Y+ K G + NA V FS+ L + F S Y
Sbjct: 144 LKFSYESDAFIVSSLIDMYS---KFGEVGNARKV---FSD---LGEQDLVVFNAMISGY- 193
Query: 501 TLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 560
A S A L+ +MK +G+ P+ ITW+ LI N E EIL+ M G
Sbjct: 194 ----ANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY 249
Query: 561 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
KPDV+++T+ I V + ++A +++M + ++PN T TLL A
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 163/403 (40%), Gaps = 53/403 (13%)
Query: 249 IIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLG 306
+I AC G + +S + ++ + + ++ SL+ N D + I+ ++
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+ D + L+ G V A+ ++ +L + D+ ++ +I +A+
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLG--------EQDLVVFNAMISGYANNSQA 199
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
AL + DM+ G+ + + W++LI+ +H E+ ++ E M L G +P+ + I
Sbjct: 200 DEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSI 259
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN--------------LKQGS-IHNA 471
+ V Q ++AF F K + + G NS +K G IH
Sbjct: 260 ISGLVHNFQNEKAFDAF------KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGY 313
Query: 472 TTVP----NGFSNSQILSFTERFPF----------TP--TTSTYNTLLKACGSDYYHAKA 515
+ V +GF S +L + F TP TT T+N+++ + KA
Sbjct: 314 SVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKA 373
Query: 516 --LINEMKTVGLSPNQITWSILIDICGGTENVE-GAIEILKSMGDAGIKPDVIAYTTAIK 572
L ++M+ G + +T++ ++ C + G L I P + Y +
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVD 433
Query: 573 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
+ + +A YE +K+ + P+ + LL A +G++
Sbjct: 434 LLGRAGKLVEA---YEMIKAMRMEPDLFVWGALLAACRNHGNM 473
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 35/234 (14%)
Query: 211 FCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLL 270
+CNI + D+ A + + + PN Y +I G+ S +Y+++
Sbjct: 268 WCNIWT------DVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMK 321
Query: 271 NQKITPNIYVFNSLMNVNSRDLTY--TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
+ + P I V+NSL+ V +R+ + + + + + GLKPD +YN +++ C AG++D
Sbjct: 322 KRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLD 381
Query: 329 LAQDMYKEL----------------------KHLESVGRLKLDVF-----TYSTIIKVFA 361
+A+++ + K LE +G++K+ T+ I+
Sbjct: 382 VARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLF 441
Query: 362 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 415
K + ALK+ +M + N + + I G +E+A +++ EM G
Sbjct: 442 KGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 127/311 (40%), Gaps = 26/311 (8%)
Query: 289 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 348
+ D + + + IM P ++ LL A C G ++ A++ K L +
Sbjct: 202 ANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKL-----FPV 256
Query: 349 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAG---VNLNTVAWSSLINACAHAGLVEQAI 405
DV ++ I+ + + +W + K R G + N ++S +I+ + G + ++
Sbjct: 257 DVEGFNVILNGWCN--IWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSL 314
Query: 406 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK- 464
+L++EM G P + +N +++ +D A + + L YNS ++
Sbjct: 315 RLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL-NEEGLKPDSVTYNSMIRP 373
Query: 465 ---QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMK 521
G + A V + + +PT T++ L+A ++ ++ +MK
Sbjct: 374 LCEAGKLDVARNVLATMISENL---------SPTVDTFHAFLEAV--NFEKTLEVLGQMK 422
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
L P + T+ +++ + E A++I M I + Y I+ + +
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 582 QALTLYEEMKS 592
+A +Y EMKS
Sbjct: 483 KAREIYSEMKS 493
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 391 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 450
+++ A A QAI+ F+ M P + F +L A ++A F + K K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASK--K 252
Query: 451 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS-- 508
+ EG+N L G + T V +I + TP +Y+ ++ +C S
Sbjct: 253 LFPVDVEGFNVIL-NGWCNIWTDVTEA---KRIWREMGNYCITPNKDSYSHMI-SCFSKV 307
Query: 509 -DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 567
+ + + L +EMK GL+P ++ L+ + + + A++++K + + G+KPD + Y
Sbjct: 308 GNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTY 367
Query: 568 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 618
+ I+ E+ A + M S + P T++ L+A + LEV
Sbjct: 368 NSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEA-VNFEKTLEV 417
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 39/307 (12%)
Query: 202 SLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMK 261
+LLP + IL I + RR + P+M + A+ID G CG
Sbjct: 339 NLLPASAILEGRTIHGYAMRRGFL---------------PHMVLETALIDMYGECGQLKS 383
Query: 262 SRYIYEDLLNQKITPNIYVFNSLMNV---NSRDLTYTLNIYQIMQNLGLKPDMTSYNILL 318
+ I++ + + N+ +NS++ N ++ + L ++Q + + L PD T+ +L
Sbjct: 384 AEVIFDRMAEK----NVISWNSIIAAYVQNGKNYS-ALELFQELWDSSLVPDSTTIASIL 438
Query: 319 KACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRS 378
A A + L++ +E+ R + ++++ ++A + A K + +
Sbjct: 439 PA--YAESLSLSEG--REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 379 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 438
V V+W+S+I A A G ++ LF EM+ + PN F +L AC + D
Sbjct: 495 KDV----VSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Query: 439 AFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 498
+ +F S K + E Y G + + FS ++ F E PF PT
Sbjct: 551 GWEYFESMKREYGIDPGIEHY------GCMLDLIGRTGNFSAAK--RFLEEMPFVPTARI 602
Query: 499 YNTLLKA 505
+ +LL A
Sbjct: 603 WGSLLNA 609
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 143/339 (42%), Gaps = 61/339 (17%)
Query: 277 NIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKE 336
++YV NSL+++ + + + +I +G + D+ S+ ++ C G V+ A++M+ E
Sbjct: 151 DVYVENSLVHMYA-NCGFIAAAGRIFGQMGFR-DVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 337 LKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 396
+ H ++FT+S +I +A ++ A+ + M+ GV N S+I++CA
Sbjct: 209 MPHR--------NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCA 260
Query: 397 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 456
H G +E + +E ++ + N+IL G ++ F
Sbjct: 261 HLGALEFGERAYEYVV-----KSHMTVNLIL--------------------GTALVDMF- 294
Query: 457 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL 516
+ G I A V G + LS +++++K + KA+
Sbjct: 295 ------WRCGDIEKAIHVFEGLPETDSLS-------------WSSIIKGLAVHGHAHKAM 335
Query: 517 --INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAIKV 573
++M ++G P +T++ ++ C VE +EI ++M D GI+P + Y + +
Sbjct: 336 HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Query: 574 CVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+ +A +M + PN LL A Y
Sbjct: 396 LGRAGKLAEAENFILKM---HVKPNAPILGALLGACKIY 431
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 125/573 (21%), Positives = 236/573 (41%), Gaps = 100/573 (17%)
Query: 214 IISEFGKRRDLISALEA--YDALKK-HLD--GPNMYIYRAIIDACGLCG---DFMKSRYI 265
+I F RR + +L+A + A + H D G + RA++ A G C D R I
Sbjct: 4 LIRFFRSRRCWVISLQARCFSAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQI 63
Query: 266 YEDLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV 323
+ +L + N Y+ NS++N+ R L ++++ L D S+NI++
Sbjct: 64 HCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL----DSASFNIMVDGYVR 119
Query: 324 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 383
+ R+ A ++ + V +Y+T+IK +A W A+++ +MR+ G+ L
Sbjct: 120 SRRLWDALKLFDVMPERSCV--------SYTTLIKGYAQNNQWSEAMELFREMRNLGIML 171
Query: 384 NTVAWSSLINACAHAG-----------------------------------LVEQAIQLF 408
N V +++I+AC+H G ++ A +LF
Sbjct: 172 NEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLF 231
Query: 409 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 468
+EM E N +N++L+ +A ++A F K + S+G + L++ +
Sbjct: 232 DEMP----ERNLVTWNVMLNGYSKAGLIEQAEELFDQIT-EKDIVSWGTMIDGCLRKNQL 286
Query: 469 HNATTV----------PNGFSNSQILSFTER-FPFTPTTSTYNTLLKACGSDYY------ 511
A P+ +LS + R + + T++K G D Y
Sbjct: 287 DEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR-GFDCYDFLQAT 345
Query: 512 --HAKALINEMKTVGLSPNQITWSILID-------ICGGTENVEGAIEILKSMGDAGIKP 562
H A+ N++K L+ Q S+ I G +N G +E + + D
Sbjct: 346 IIHFYAVSNDIK---LALQQFEASVKDHIASRNALIAGFVKN--GMVEQAREVFDQTHDK 400
Query: 563 DVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 621
D+ ++ I +S + + AL L+ EM S ++ P+ +T ++ A S GS+ E ++
Sbjct: 401 DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRA 460
Query: 622 LAIYQDMQKAGYKPNDYYLEELIEEWCE-GVIQDNREYQAEFSSIKKSELERPQSLLLEK 680
+ + + PND +I+ + + G I+ + +I S + P + ++
Sbjct: 461 ---HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTIS-PWNAIICG 516
Query: 681 IAAHLLKRVADILAIDVQGLTKVEARLVILAVL 713
A H ++A L D+Q L + + VL
Sbjct: 517 SATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 31/288 (10%)
Query: 126 VQGLEISLSAHLNASAMDVIAAECRRMVMSGHIAEAVELMEVLARFQLPIRELVQPSDMI 185
+Q E S+ H+ AS +IA V +G + +A E+ + Q +++ + MI
Sbjct: 360 LQQFEASVKDHI-ASRNALIAG----FVKNGMVEQAREVFD-----QTHDKDIFSWNAMI 409
Query: 186 KRCVLSRNPKLA-------VRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHL 238
S +P+LA + + + P A I ++ S L A+D L
Sbjct: 410 SGYAQSLSPQLALHLFREMISSSQVKPDA-ITMVSVFSAISSLGSLEEGKRAHDYLNFST 468
Query: 239 DGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLN---QKITP-NIYVFNSLMNVNSRDLTY 294
PN + AIID CG + I+ N I+P N + S + +++
Sbjct: 469 IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAK---L 525
Query: 295 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 354
L++Y +Q+L +KP+ ++ +L ACC AG V+L + ++ +K S ++ D+ Y
Sbjct: 526 ALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMK---SDHGIEPDIKHYG 582
Query: 355 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 402
++ + A + A K ++ V + + W L++A G VE
Sbjct: 583 CMVDLLGKAGRLEEA---KEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 129/278 (46%), Gaps = 26/278 (9%)
Query: 340 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 399
+E+ LK + F I+ ++A A + +L+V D+ ++ + ++L+ AC A
Sbjct: 107 IENRPDLKSERFAAHAIV-LYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAK 165
Query: 400 LVEQAIQLFEEM-LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNKM-LGSF 455
++A +++ EM + G EP+ + +N ++ E+ ++ KG K SF
Sbjct: 166 DYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF 225
Query: 456 G---EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDY 510
G G+ + K + ++L+ + STYN +++ C
Sbjct: 226 GLMISGFYAEDKSDEV------------GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKS 273
Query: 511 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 570
AKAL++ M + G+ PN +T+S LI ++ E A ++ K M + G KPD Y T
Sbjct: 274 KEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTL 333
Query: 571 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 608
I + +F+ AL+L +E + NWV +++K+
Sbjct: 334 IYYLCKGGDFETALSLCKE----SMEKNWVPSFSIMKS 367
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 265 IYEDLLNQKITPNIYVFNSLM--NVNSRDLTYTLNIYQIMQNL-GLKPDMTSYNILLKAC 321
++ DL +I+ + N+L+ + ++D +Y M + G++PD+ +YN ++K
Sbjct: 138 VFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVF 197
Query: 322 C------------------------------VAG--RVDLAQDMYKELKHLESVGRLKLD 349
C ++G D + ++ K L ++ G + +
Sbjct: 198 CESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRG-VNIG 256
Query: 350 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 409
V TY+ I+ K + A + M SAG+ NTV +S LI+ + E+A +LF+
Sbjct: 257 VSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK 316
Query: 410 EMLLAGCEPNTQC-FNIILHAC 430
M+ GC+P+++C F +I + C
Sbjct: 317 IMVNRGCKPDSECYFTLIYYLC 338
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 50/292 (17%)
Query: 273 KITPNIYVFNSLMNVNSRDLTYTL--NIYQIMQN-LGLKPDMTSYNILLKACCVAGRVDL 329
KI PN FNS+M R+ + I++ M+ +G P++ SYN+L++A C G +
Sbjct: 240 KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A+ +++E+K V + D+ Y+T+I A ++ DM G+ + +
Sbjct: 300 AEKVWEEMK----VRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYE 355
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 449
L+N AG V+ + ++ EM G E + + + A VE DR G
Sbjct: 356 HLVNGYCKAGDVDSGLVVYREMKRKGFEAD----GLTIEALVEGLCDDR--------DGQ 403
Query: 450 KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD 509
+++ + +++ + ++ A F P+ + Y L+K D
Sbjct: 404 RVVEA------ADIVKDAVREAM-------------------FYPSRNCYELLVKRLCED 438
Query: 510 YYHAKAL--INEMKTVGLSPNQITWSILIDICG--GTENVEG--AIEILKSM 555
+AL EM G P+Q T+ ID G G E AIE+ +S+
Sbjct: 439 GKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAESL 490
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 494 PTTSTYNTLLKACGSDYYH------AKALINEMKT-VGLSPNQITWSILIDICGGTENVE 546
P +T+N+++ + +Y + + EM+ VG SPN ++++L++ +
Sbjct: 243 PNATTFNSMMVS----FYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMS 298
Query: 547 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 606
A ++ + M G+ D++AY T I + +A L+ +M I +TY L+
Sbjct: 299 EAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLV 358
Query: 607 KARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWCEGVIQDNREYQ 659
K G +V L +Y++M++ G++ + +E L+E C D+R+ Q
Sbjct: 359 NGYCKAG---DVDSGLVVYREMKRKGFEADGLTIEALVEGLC-----DDRDGQ 403
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 170/419 (40%), Gaps = 68/419 (16%)
Query: 204 LPHAHILFCNIISEFGKRRDLIS-ALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKS 262
+ H ++ N + E R L+ A + ++ +K P+ I I+ ACG G+ +
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 263 RYIYEDLLNQKITPNIYVFNSLMNV----NSRDLTYTLNIYQIMQNLGLKPDMTSYNILL 318
R IYE L+ + + ++ +L+ + D+ ++NL + M S
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVS----- 286
Query: 319 KACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRS 378
GR+D AQ ++ + + K D+ ++T+I + ++ Q AL+V +M
Sbjct: 287 -GYSKCGRLDDAQVIFDQTE--------KKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 379 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 438
+G+ + V+ S+I+ACA+ G++++A + + + G E N ++
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALI----------- 386
Query: 439 AFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 498
N K G + V ++S+ +S
Sbjct: 387 ---------------------NMYAKCGGLDATRDVFEKMPRRNVVSW---------SSM 416
Query: 499 YNTL-LKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD 557
N L + SD A +L MK + PN++T+ ++ C + VE +I SM D
Sbjct: 417 INALSMHGEASD---ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Query: 558 A-GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
I P + Y + + + ++AL + E M + N V + +L+ A +G +
Sbjct: 474 EYNITPKLEHYGCMVDLFGRANLLREALEVIESMP---VASNVVIWGSLMSACRIHGEL 529
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 108/287 (37%), Gaps = 46/287 (16%)
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 368
PD Y L+K GRV M + ++ + D TY+T++ F +A L
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNS-HPDEVTYTTVVSAFVNAGLMDR 470
Query: 369 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL-AGCEPNTQCFNIIL 427
A +V +M GV N + ++ L+ +++A L EM AG EP+ +NII+
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 428 HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT 487
C+ A FF+ + +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGI------------------------------------ 554
Query: 488 ERFPFTPTTSTYNTLLKA---CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTEN 544
PT +Y TL+KA G + M + + I W++L++
Sbjct: 555 -----APTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL 609
Query: 545 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 591
+E A ++ M + G P+V Y + +++ AL L++E+K
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 494 PTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 551
P TY T++ A A+ ++ EM +G+ N+IT+++L+ ++ A ++
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 552 LKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 610
L+ M DAGI+PDV++Y I C+ + AL + EM++ I P ++Y TL+KA +
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 611 KYG 613
G
Sbjct: 570 MSG 572
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 472 TTVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEM-K 521
TTV + F N+ Q+L+ R TYN LLK C A+ L+ EM +
Sbjct: 456 TTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE 515
Query: 522 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 581
G+ P+ ++++I+ID C ++ GA+ M GI P I+YTT +K S K
Sbjct: 516 DAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPK 575
Query: 582 QALTLYEE-MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPN 636
A +++E M + + + +N L++ + G + + Q+ + M++ G+ PN
Sbjct: 576 LANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR---VVSRMKENGFYPN 628
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 8/219 (3%)
Query: 219 GKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNI 278
G+ D LEA P+ Y ++ A G ++R + ++ + N
Sbjct: 428 GRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANR 487
Query: 279 YVFNSLMNVNSRDLTYTLN---IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK 335
+N L+ + L + ++ ++ G++PD+ SYNI++ C + A +
Sbjct: 488 ITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFN 547
Query: 336 ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM-RSAGVNLNTVAWSSLINA 394
E++ + K+ +Y+T++K FA + ++A +V +M V ++ +AW+ L+
Sbjct: 548 EMR-TRGIAPTKI---SYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEG 603
Query: 395 CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 433
GL+E A ++ M G PN + + + +A
Sbjct: 604 YCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 154/385 (40%), Gaps = 62/385 (16%)
Query: 256 CGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSRDLTYTLNI--YQIMQNLGLKPDMTS 313
C +KS + N +V N+L+ + + + ++ + +M LG+KPD +
Sbjct: 69 CSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLT 128
Query: 314 YNILLKACCVAGRVDLAQDMYK-ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 372
+ +LK+ G L + ++ LK+ + D F +++ ++A + A +V
Sbjct: 129 FPFVLKSNSKLGFRWLGRALHAATLKNF-----VDCDSFVRLSLVDMYAKTGQLKHAFQV 183
Query: 373 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 432
+ + + W+ LIN A + A LF M E N+ ++ ++ V+
Sbjct: 184 FEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSM----PERNSGSWSTLIKGYVD 239
Query: 433 ACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 492
+ + +RA + F + + ++ + TT+ NGFS +
Sbjct: 240 SGELNRAKQLFEL-----------------MPEKNVVSWTTLINGFSQT----------- 271
Query: 493 TPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 552
DY A + EM GL PN+ T + ++ C + + I I
Sbjct: 272 ---------------GDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 553 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 612
+ D GIK D T + + + A T++ M H + +++ +++ + +
Sbjct: 317 GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN----HKDILSWTAMIQGWAVH 372
Query: 613 GSVLEVQQCLAIYQDMQKAGYKPND 637
G + QC ++ M +G KP++
Sbjct: 373 GRFHQAIQC---FRQMMYSGEKPDE 394
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 145/336 (43%), Gaps = 35/336 (10%)
Query: 209 ILFCNI-ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE 267
IL N+ I+ + + +D+ A + ++ + G + + +D+ G+ +++ ++E
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS----GELNRAKQLFE 251
Query: 268 DLLNQKITPNIYVFNSLMNVNSR--DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAG 325
L+ +K N+ + +L+N S+ D ++ Y M GLKP+ + +L AC +G
Sbjct: 252 -LMPEK---NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSG 307
Query: 326 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 385
+ ++ + +KLD + ++ ++A A V +M +
Sbjct: 308 ALGSGIRIHGYILD----NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI---- 359
Query: 386 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 445
++W+++I A G QAIQ F +M+ +G +P+ F +L AC+ + + D FF S
Sbjct: 360 LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDS 419
Query: 446 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS----FTERFPFTPTTSTYNT 501
+ + + + ++ + V + + L+ E P P +T+
Sbjct: 420 MRLDYAI------------EPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 502 LLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 537
L +AC + + +A + L P I +D
Sbjct: 468 LYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLD 503
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 135/347 (38%), Gaps = 54/347 (15%)
Query: 309 PDMTSY---NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
P++ S+ +ILL C +A + + +K + + R K V ++ +++ F +
Sbjct: 134 PNLLSFKSMSILL--CKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTERE 191
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
+ A + + S N + + L+ AG V + EM+ G +PN+ + I
Sbjct: 192 MKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGI 250
Query: 426 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 485
+ + + A R F
Sbjct: 251 RIDGFCKKRNFGEALRLFED---------------------------------------- 270
Query: 486 FTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE 543
+R F T TL+ G + A+ L +E+ GL+P+ ++ L+
Sbjct: 271 -MDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCG 329
Query: 544 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK--NFKQALTLYEEMKSCEIHPNWVT 601
+V GAI+++K M + GI+PD + + + ++SK F Y++MK + P T
Sbjct: 330 DVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPT 389
Query: 602 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEWC 648
L+K G EV L +++ M + GY P+ + LE L C
Sbjct: 390 IVMLMKLFCHNG---EVNLGLDLWKYMLEKGYCPHGHALELLTTALC 433
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 133/326 (40%), Gaps = 57/326 (17%)
Query: 204 LPHAHILFCNI----------ISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDAC 253
L HA I+ C++ + + K L SA ++ +K ++
Sbjct: 161 LVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDE----------NVVCCT 210
Query: 254 GLCGDFMKSRYI--YEDLLNQKITPNIYVFNSLMNVNSRD---LTYTLNIYQIMQNLGLK 308
+ +M ++ E++ N +I V+N+++ SR ++++Y MQ G
Sbjct: 211 SMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFH 270
Query: 309 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY----STIIKVFADAK 364
P+++++ ++ AC V ++ Q ++ ++ +K V+T+ S+++ ++A
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQQVHAQI--------MKSGVYTHIKMGSSLLDMYAKCG 322
Query: 365 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 424
A +V M+ N +W+S+I+ G E+A++LF M EPN F
Sbjct: 323 GINDARRVFDQMQEK----NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFL 378
Query: 425 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSN 480
L AC + D+ + F S + + + E Y + + G ++ A
Sbjct: 379 GALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKA--------- 429
Query: 481 SQILSFTERFPFTPTTSTYNTLLKAC 506
F P P + + LL +C
Sbjct: 430 ---FEFARAMPERPDSDIWAALLSSC 452
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 196/473 (41%), Gaps = 88/473 (18%)
Query: 199 RYASLLPHAHILFCNIISEFGKRRDLISALEA---YDALKKHLDGPNMYIYRAIIDACGL 255
R+ S+ P IL N S F ++++ S A AL++H++ P
Sbjct: 5 RFTSISPR--ILPSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAP------------ 50
Query: 256 CGDFMKSRYIYEDLLNQKITP--NIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTS 313
+ I+ D++ P NI + ++++ L+Y ++ + KP +++
Sbjct: 51 ----KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELP----KPTLSA 102
Query: 314 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALK-- 371
YN ++ G L +++ ++ + G K D +T S ++K ++++ M L
Sbjct: 103 YNYMISGYLKHG---LVKELLLLVQRMSYSGE-KADGYTLSMVLKA-SNSRGSTMILPRS 157
Query: 372 ----VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 427
V + V L+ V ++L++ +G +E A +FE M + N C ++
Sbjct: 158 LCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK----DENVVCCTSMI 213
Query: 428 HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS------ 481
+ + A F++ K +K ++NA GFS S
Sbjct: 214 SGYMNQGFVEDAEEIFNTTK---------------VKDIVVYNAMV--EGFSRSGETAKR 256
Query: 482 --QILSFTERFPFTPTTSTYNTLLKACGSDYYH--AKALINEMKTVGLSPNQITWSILID 537
+ +R F P ST+ +++ AC H + + ++ G+ + S L+D
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 538 I---CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 594
+ CGG + + ++ + +V ++T+ I ++ N ++AL L+ MK
Sbjct: 317 MYAKCGGINDARRVFDQMQ-------EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR 369
Query: 595 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEELIEEW 647
I PN+VT+ L A S G V + I++ MQ+ DY ++ +E +
Sbjct: 370 IEPNYVTFLGALSACSHSGL---VDKGYEIFESMQR------DYSMKPKMEHY 413
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 171/419 (40%), Gaps = 55/419 (13%)
Query: 213 NIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYEDLLN- 271
+I+ + K ++ SA + +D + + ++ + ++I G F + +Y+ +L
Sbjct: 172 GMITYYTKCDNIESARKVFDEMSER----DVVSWNSMISGYSQSGSFEDCKKMYKAMLAC 227
Query: 272 QKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL 329
PN S+ S DL + L +++ M ++ D++ N ++ G +D
Sbjct: 228 SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 330 AQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 389
A+ ++ E+ +SV TY II + L + A+ + +M S G++ W+
Sbjct: 288 ARALFDEMSEKDSV--------TYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWN 335
Query: 390 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 449
++I+ E+ I F EM+ G PNT + L + + + Y + KG
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPNT----VTLSSLLPSLTYSS------NLKGG 385
Query: 450 KMLGSFG--EGYNSNLKQGSIHNATTVPNGFSNSQILSFTER----------FPFTPTTS 497
K + +F G ++N I+ T++ + ++ L +R +T +
Sbjct: 386 KEIHAFAIRNGADNN-----IYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Query: 498 TYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM-G 556
Y A D A +L ++M+ +G P+ +T + ++ + + + A I SM
Sbjct: 441 AY-----AVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLT 495
Query: 557 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
I+P V Y + V + A+ +M I P + LL S G +
Sbjct: 496 KYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP---IDPIAKVWGALLNGASVLGDL 551
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 498 TYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 555
TY T+L G ++ + MK G+ + +T++ LI + +V+GA+ + + M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 556 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 615
D G +P V++YT +K+ ++A +Y+EM + PN TY L++ G
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATG-- 241
Query: 616 LEVQQCLAIYQDMQKAGYKPN 636
+ ++ L I+ MQ+ G +P+
Sbjct: 242 -KCEEALDIFFKMQEIGVQPD 261
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 20/151 (13%)
Query: 286 NVNSRDLTYTLNIYQIMQ------------NLGLKPDMTSYNILLKACCVAGRVDLAQDM 333
+V +RD+ NIY I++ +LG++ D N +LKA + L +
Sbjct: 54 SVYTRDIVS--NIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNW 111
Query: 334 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 393
++K K D FTY+T++ +F +A Q V H M+ GV ++TV ++SLI+
Sbjct: 112 AAQIKGF------KHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIH 165
Query: 394 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 424
+ +G V+ A++L+EEM GCEP +
Sbjct: 166 WVSSSGDVDGAMRLWEEMRDNGCEPTVVSYT 196
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 306 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 365
G K D +Y +L AGR+ Q MY ++ G L +D TY+++I + +
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRI---QSMYSVFHLMKEKGVL-IDTVTYTSLIHWVSSSGD 172
Query: 366 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 425
A+++ +MR G V++++ + G VE+A ++++EML + PN + +
Sbjct: 173 VDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTV 232
Query: 426 ILHACVEACQYDRAFRFF 443
++ V + + A F
Sbjct: 233 LMEYLVATGKCEEALDIF 250
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 524 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 583
G + T++ ++DI G ++ + M + G+ D + YT+ I S + A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 584 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPNDYYLEEL 643
+ L+EEM+ P V+Y +K G V E + +Y++M ++ PN + L
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATE---VYKEMLRSRVSPNCHTYTVL 233
Query: 644 IE 645
+E
Sbjct: 234 ME 235
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 122/322 (37%), Gaps = 51/322 (15%)
Query: 337 LKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG-VNLNTVAWSSLINAC 395
LK ES K Y + + AK W + MR V LNTVA ++
Sbjct: 108 LKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVA--KIMRRF 165
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF 455
A AG E+A+ +F+ + G E NT+ N++L C+ R
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDT---LCKEKRV---------------- 206
Query: 456 GEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA 515
++++ + TP T+N + +A
Sbjct: 207 -----------------------EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 516 L--INEMKTVGLSPNQITWSILIDI-CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 572
L I EMK G P I+++ +I C E ++ E+L M G P+ I YTT +
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK-VYEMLSEMEANGSPPNSITYTTIMS 302
Query: 573 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
K F++AL + MK P+ + YN L+ ++ G + E ++ + +M + G
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV--EMPELG 360
Query: 633 YKPNDYYLEELIEEWCEGVIQD 654
N +I +C +D
Sbjct: 361 VSINTSTYNSMIAMYCHHDEED 382
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+ P+ ++NI + C A RV+ A +E+K + V +Y+TII+ + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG----HGFRPCVISYTTIIRCYCQQFEF 275
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
++ +M + G N++ +++++++ E+A+++ M +GC+P++ +N +
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN----ATTVPNGFSNSQ 482
+H A + + A R F + YNS + H+ A + +S
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 483 ILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTV-GLSPNQITWSILIDIC 539
+ + P TY LL++C D L+ EM T LS ++ T++ LI
Sbjct: 396 LCN--------PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRL 447
Query: 540 GGTENVEGAIEILKSMGDAGIKP 562
E A + + M I P
Sbjct: 448 CRANMCEWAYCLFEEMISQDITP 470
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 15/281 (5%)
Query: 141 AMDVIAAECRRMVMSGHIAEAVELMEVLARFQL-----PIRELVQPSDMIKRCVLSRNPK 195
++ +A RR +G EAV + + L F L + L+ KR +R
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 196 LAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGL 255
L ++ + + P+AH F I + K + AL +K H P + Y II
Sbjct: 214 LQLK-SHITPNAHT-FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 256 CGDFMKSRYIYEDLLNQKITPNIYVFNSLMN-VNS-RDLTYTLNIYQIMQNLGLKPDMTS 313
+F+K + ++ PN + ++M+ +N+ ++ L + M+ G KPD
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 314 YNILLKACCVAGRVDLAQDMYK-ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 372
YN L+ AGR++ A+ +++ E+ L + ++ TY+++I ++ A+++
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELG----VSINTSTYNSMIAMYCHHDEEDKAIEL 387
Query: 373 KHDMRSAGV-NLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
+M S+ + N + + L+ +C G V + +L +EM+
Sbjct: 388 LKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 122/322 (37%), Gaps = 51/322 (15%)
Query: 337 LKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG-VNLNTVAWSSLINAC 395
LK ES K Y + + AK W + MR V LNTVA ++
Sbjct: 108 LKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVA--KIMRRF 165
Query: 396 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF 455
A AG E+A+ +F+ + G E NT+ N++L C+ R
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDT---LCKEKRV---------------- 206
Query: 456 GEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA 515
++++ + TP T+N + +A
Sbjct: 207 -----------------------EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 516 L--INEMKTVGLSPNQITWSILIDI-CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 572
L I EMK G P I+++ +I C E ++ E+L M G P+ I YTT +
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK-VYEMLSEMEANGSPPNSITYTTIMS 302
Query: 573 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 632
K F++AL + MK P+ + YN L+ ++ G + E ++ + +M + G
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV--EMPELG 360
Query: 633 YKPNDYYLEELIEEWCEGVIQD 654
N +I +C +D
Sbjct: 361 VSINTSTYNSMIAMYCHHDEED 382
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Query: 307 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 366
+ P+ ++NI + C A RV+ A +E+K + V +Y+TII+ + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG----HGFRPCVISYTTIIRCYCQQFEF 275
Query: 367 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 426
++ +M + G N++ +++++++ E+A+++ M +GC+P++ +N +
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 427 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN----ATTVPNGFSNSQ 482
+H A + + A R F + YNS + H+ A + +S
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 483 ILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTV-GLSPNQITWSILIDIC 539
+ + P TY LL++C D L+ EM T LS ++ T++ LI
Sbjct: 396 LCN--------PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRL 447
Query: 540 GGTENVEGAIEILKSMGDAGIKP 562
E A + + M I P
Sbjct: 448 CRANMCEWAYCLFEEMISQDITP 470
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 15/281 (5%)
Query: 141 AMDVIAAECRRMVMSGHIAEAVELMEVLARFQL-----PIRELVQPSDMIKRCVLSRNPK 195
++ +A RR +G EAV + + L F L + L+ KR +R
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 196 LAVRYASLLPHAHILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGL 255
L ++ + + P+AH F I + K + AL +K H P + Y II
Sbjct: 214 LQLK-SHITPNAHT-FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 256 CGDFMKSRYIYEDLLNQKITPNIYVFNSLMN-VNS-RDLTYTLNIYQIMQNLGLKPDMTS 313
+F+K + ++ PN + ++M+ +N+ ++ L + M+ G KPD
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 314 YNILLKACCVAGRVDLAQDMYK-ELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 372
YN L+ AGR++ A+ +++ E+ L + ++ TY+++I ++ A+++
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELG----VSINTSTYNSMIAMYCHHDEEDKAIEL 387
Query: 373 KHDMRSAGV-NLNTVAWSSLINACAHAGLVEQAIQLFEEML 412
+M S+ + N + + L+ +C G V + +L +EM+
Sbjct: 388 LKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 194/469 (41%), Gaps = 71/469 (15%)
Query: 214 IISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMK---SRYIYEDLL 270
I+S+ R L+ + + + K N+ +ID C C + M +R ++E +
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI- 67
Query: 271 NQKITPNIYVFNSLMN--VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD 328
P++Y++NS++ NS + L YQ M G PD ++ +LKAC +G D
Sbjct: 68 ---DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKAC--SGLRD 122
Query: 329 LAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA 387
+ + H V +++++ + ++ ++ L+V D+ N VA
Sbjct: 123 I---QFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP----QWNVVA 175
Query: 388 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 447
W SLI+ + AI+ F EM G + N +L AC C+ ++FH +
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGR-CKDIVTGKWFHGFL 234
Query: 448 GNKMLGSFGEGYNSNLKQGSIHN---ATTVPNGFSNSQILSFTERFPFTP----TTSTYN 500
G G++ + N AT++ + ++ L T R+ F T ++N
Sbjct: 235 Q-------GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLR-TARYLFDGMPERTLVSWN 286
Query: 501 TLLKACG--SDYYHAKALINEMKTVGLSPNQITW-----SILIDICGG-TENVEGAIEIL 552
+++ D A + +M +G++P+++T+ + +I C +++ +
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 553 KSMGDAGI-------------------------KPDVIAYTTAIKVCVESKNFKQALTLY 587
+ DA I K D IA+T I + +AL+++
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 588 EEMKS-CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKP 635
+ M+ P+ +TY +L A S G V E Q+ A +D+ G +P
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH--GLEP 453
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 126/302 (41%), Gaps = 29/302 (9%)
Query: 256 CGDFMKSRYIYEDL-LNQKITPNIYVFNSLMNVNSRDLTYTLNIYQIMQNLGLKPDMTSY 314
CG R +++++ + IT N + N + D+ L +Y+ M++ G+ PD +
Sbjct: 204 CGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV---LELYEQMKSSGVCPDPFTL 260
Query: 315 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKH 374
+L +C G + ++ K +ES G + +VF + I ++A A V
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGK---LVESNGFVP-NVFVSNASISMYARCGNLAKARAVFD 316
Query: 375 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 434
M + V+W+++I G+ E + LF++M+ G P+ F ++L AC +
Sbjct: 317 IMPVKSL----VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Query: 435 QYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERF 490
D+ F + K L E Y+ + + G + A + F E
Sbjct: 373 LTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEA------------MEFIESM 420
Query: 491 PFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILI-DICGGTENVEGAI 549
P P + + LL AC A + K + PN I + +L+ +I ++N EG
Sbjct: 421 PVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIW 480
Query: 550 EI 551
I
Sbjct: 481 RI 482
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 161/373 (43%), Gaps = 61/373 (16%)
Query: 242 NMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNVNSR-DLTYTLNIYQ 300
N+ + +I+D CG ++++ + ++ ++ ++ +N+L++ R D + L ++Q
Sbjct: 247 NLPVMNSILDLYCRCGYLSEAKHYFHEMEDK----DLITWNTLISELERSDSSEALLMFQ 302
Query: 301 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL------KHLESVGRLKLDVFTYS 354
++ G P+ ++ L+ AC ++ Q ++ + K++E L +D++
Sbjct: 303 RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANAL-IDMYAKC 361
Query: 355 TII----KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 410
I +VF + D R N V+W+S++ G +A++LF++
Sbjct: 362 GNIPDSQRVFGEIV----------DRR------NLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 411 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 470
M+ +G P+ F +L AC A ++ ++F N M +G + + I+N
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYF-----NVMESEYGINPDRD-----IYN 455
Query: 471 ATTVPNGFSN--SQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEM---KTVGL 525
G + + ER PF P ST+ +L AC + ++ LI+ + K + L
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHN--GLISRLAARKVMEL 513
Query: 526 SPNQITWSILIDICGGTEN-------VEGAIEILKSMGDAG-----IKPDVIAYTTAIKV 573
P + +++ E V + ++ + +AG ++ V ++ + K+
Sbjct: 514 KPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKM 573
Query: 574 CVESKNFKQALTL 586
C + + L L
Sbjct: 574 CPNASSVYSVLGL 586
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/473 (18%), Positives = 185/473 (39%), Gaps = 77/473 (16%)
Query: 208 HILFCNIISEFGKRRDLISALEAYDALKKHLDGPNMYIYRAIIDACGLCGDFMKSRYIYE 267
HIL N+I + ++ + A +D + ++ + A+I ++ +
Sbjct: 45 HILATNLIVSYFEKGLVEEARSLFDEMPDR----DVVAWTAMITGYASSNYNARAWECFH 100
Query: 268 DLLNQKITPNIYVFNSLMNV--NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLK---ACC 322
+++ Q +PN + +S++ N + L Y ++ ++ LG++ + N ++ C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 323 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 382
V ++ A +++++K +K DV T++T+I F LK+ M
Sbjct: 161 VT--MEAACLIFRDIK-------VKNDV-TWTTLITGFTHLGDGIGGLKMYKQMLLENAE 210
Query: 383 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 442
+ + + A A V Q+ ++ G + N N IL A +
Sbjct: 211 VTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHY 270
Query: 443 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP---FTPTTSTY 499
FH + ++ +N+ + + + S+ +L F +RF F P T+
Sbjct: 271 FHEMEDKDLIT-----WNTLISE--------LERSDSSEALLMF-QRFESQGFVPNCYTF 316
Query: 500 NTLLKACGS---------------------DYYHAKALINEMKTVGLSP----------- 527
+L+ AC + + A ALI+ G P
Sbjct: 317 TSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVD 376
Query: 528 --NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 585
N ++W+ ++ G A+E+ M +GI+PD I + + C + ++ L
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK 436
Query: 586 LYEEMKS-CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYKPND 637
+ M+S I+P+ YN ++ + G + E Y+ +++ +KP++
Sbjct: 437 YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA------YELVERMPFKPDE 483