Miyakogusa Predicted Gene

Lj1g3v4578900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4578900.1 tr|A9U207|A9U207_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_154541,33.15,2e-18,Thioredoxin-like,Thioredoxin-like
fold; no description,Thioredoxin-like fold;
AhpC-TSA_2,NULL,CUFF.32695.1
         (256 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37240.1 | Symbols:  | Thioredoxin superfamily protein | chr2...   319   1e-87
AT5G65840.1 | Symbols:  | Thioredoxin superfamily protein | chr5...   100   6e-22

>AT2G37240.1 | Symbols:  | Thioredoxin superfamily protein |
           chr2:15640235-15641720 REVERSE LENGTH=248
          Length = 248

 Score =  319 bits (818), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 147/204 (72%), Positives = 167/204 (81%)

Query: 53  RHHATTLPSASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFG 112
           R  A  + + +       + + T  SLD+VKV DL GN IPISDLWKDRKAVVAFARHFG
Sbjct: 45  RRSAVVVSAITGASSGAGIGKGTADSLDTVKVLDLRGNEIPISDLWKDRKAVVAFARHFG 104

Query: 113 CVLCRKRADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGEIYADPTHSSYEA 172
           CVLCRKRA YLA KKD+MDASGVALVLIGPGS+DQA  F EQTKF GE+YADP H+SYEA
Sbjct: 105 CVLCRKRAAYLAEKKDVMDASGVALVLIGPGSIDQANTFVEQTKFKGEVYADPNHASYEA 164

Query: 173 LNFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNI 232
           L FVSGV  TFTP A +KI++ YMEGYRQDWKLSF KDTV RGGW+QGGI+VAGPGK+NI
Sbjct: 165 LEFVSGVSVTFTPKAAMKILESYMEGYRQDWKLSFMKDTVERGGWQQGGILVAGPGKDNI 224

Query: 233 SYLHKDKEAGDDPEIEDILKACCS 256
           SY+ KDKEAGDDP +E+ILKACC+
Sbjct: 225 SYIRKDKEAGDDPPVEEILKACCA 248


>AT5G65840.1 | Symbols:  | Thioredoxin superfamily protein |
           chr5:26344097-26346057 REVERSE LENGTH=275
          Length = 275

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 92/199 (46%), Gaps = 5/199 (2%)

Query: 61  SASAGVESPV-LSEDTTGSLDSVKVFDLNGNGIPISDLW--KDRKAVVAFARHFGCVLCR 117
           SA A  ES     ED    L  V +F  +G  +  SDLW  KD  A V   RHFGCV C 
Sbjct: 73  SARAATESFTDYREDIGEILGDVSIFTASGQRVQFSDLWDQKDGIAAVVLLRHFGCVCCW 132

Query: 118 KRADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGE-IYADPTHSSYEALNFV 176
           + A  L   K   DA+GV L+ +G G+ D+A+  A +  F  E +YADP   +Y+ L   
Sbjct: 133 ELATALKEAKPRFDAAGVKLIAVGVGTPDKARILATRLPFPMECLYADPERKAYDVLGLY 192

Query: 177 SGVLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLH 236
            G+  TF   A  K+   + E        + E     R    Q G      GK  + Y  
Sbjct: 193 FGLGRTFFNPASTKVFSRFSEIREATKNYTIEATPEDRSSVLQQGGTFVFRGK-KLLYGR 251

Query: 237 KDKEAGDDPEIEDILKACC 255
           KD+  GD P ++D++  CC
Sbjct: 252 KDEGTGDHPSLDDVINVCC 270