Miyakogusa Predicted Gene

Lj1g3v4554620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4554620.1 Non Chatacterized Hit- tr|I1LYV2|I1LYV2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42178 PE,85.42,5e-16,
,NODE_64031_length_151_cov_53.000000.path1.1
         (49 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62450.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    84   2e-17

>AT3G62450.1 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN: endomembrane
          system; EXPRESSED IN: 24 plant structures; EXPRESSED
          DURING: 15 growth stages; Has 35 Blast hits to 35
          proteins in 15 species: Archae - 0; Bacteria - 0;
          Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
          Eukaryotes - 1 (source: NCBI BLink). |
          chr3:23098144-23098630 FORWARD LENGTH=74
          Length = 74

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 45/49 (91%)

Query: 1  MELFMIKTGFYDKVTVLESEKRAWENSPEAQAMRDALNPWRHIDAEGTK 49
          ME FMIKTGFYDKVTV+E+E+RA ENSPEAQA+R+ALNPWR+ DAE +K
Sbjct: 24 MEFFMIKTGFYDKVTVIEAERRALENSPEAQAIREALNPWRNKDAETSK 72