Miyakogusa Predicted Gene

Lj1g3v4528650.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4528650.2 Non Chatacterized Hit- tr|A3ACN2|A3ACN2_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,37.16,9e-19,seg,NULL,CUFF.32586.2
         (233 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20300.1 | Symbols: ALE2 | Protein kinase superfamily protein...   203   8e-53
AT5G56890.1 | Symbols:  | Protein kinase superfamily protein | c...   142   2e-34

>AT2G20300.1 | Symbols: ALE2 | Protein kinase superfamily protein |
           chr2:8756475-8759845 REVERSE LENGTH=744
          Length = 744

 Score =  203 bits (516), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 94/133 (70%), Positives = 110/133 (82%), Gaps = 2/133 (1%)

Query: 101 AAPPPSKDQACDQSCTDPLTSTPFGSPCGCVYPMKVRLTLDVAPYAVFPVMTELENEVAL 160
           A  P S D  C Q+C +PLTSTPFGSPCGCV+PMKV+L L VAP+++FPV  ELE EVA 
Sbjct: 90  AVSPSSHD--CQQTCVEPLTSTPFGSPCGCVFPMKVQLLLSVAPFSIFPVTNELEIEVAA 147

Query: 161 GTYLEQSQVKIMGAISDSQNEGRTIVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSL 220
           GTYLEQSQVKIMGA +DS+N+G+T+VDINLVPLGEKFDNTTA L Y+RF HKKVPLN ++
Sbjct: 148 GTYLEQSQVKIMGASADSENQGKTVVDINLVPLGEKFDNTTATLIYQRFRHKKVPLNETV 207

Query: 221 FGDYAAVYIIYPG 233
           FGDY   +I YPG
Sbjct: 208 FGDYEVTHISYPG 220


>AT5G56890.1 | Symbols:  | Protein kinase superfamily protein |
           chr5:23010801-23015559 REVERSE LENGTH=1113
          Length = 1113

 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 62/119 (52%), Positives = 89/119 (74%)

Query: 115 CTDPLTSTPFGSPCGCVYPMKVRLTLDVAPYAVFPVMTELENEVALGTYLEQSQVKIMGA 174
           C +P T+TP GSPCGCV+P++V L L +A Y  FP+++E   E++ G +++QSQV+IMGA
Sbjct: 463 CLEPYTNTPPGSPCGCVWPIQVELRLSMALYDFFPMVSEFAREISAGVFMKQSQVRIMGA 522

Query: 175 ISDSQNEGRTIVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYAAVYIIYPG 233
            + S+   ++IV I+LVPLG+KFDN TA LTY+RFW KKV ++  +FG Y  +Y+ YPG
Sbjct: 523 NAASEQPEKSIVLIDLVPLGDKFDNMTAMLTYQRFWSKKVYIDEPIFGGYDVIYVRYPG 581