Miyakogusa Predicted Gene
- Lj1g3v4528360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4528360.1 CUFF.32564.1
(249 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 162 2e-40
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 162 2e-40
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 162 2e-40
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 162 3e-40
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 162 3e-40
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 161 3e-40
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 154 4e-38
AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein... 139 2e-33
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 120 1e-27
AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein ... 119 1e-27
AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein ... 119 2e-27
AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein ... 119 2e-27
AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein ... 119 2e-27
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 118 4e-27
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 117 8e-27
AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 115 3e-26
AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 115 3e-26
AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducib... 113 1e-25
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 110 1e-24
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 107 6e-24
AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 107 1e-23
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 105 3e-23
AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein... 103 2e-22
AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid induci... 96 3e-20
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 96 3e-20
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 93 1e-19
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 90 1e-18
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 89 3e-18
AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 | chr... 89 4e-18
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 88 7e-18
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 87 1e-17
AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15... 84 1e-16
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-aceti... 82 2e-16
AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 82 2e-16
AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29... 80 9e-16
AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34... 79 3e-15
AT1G04550.1 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 76 2e-14
AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32... 72 5e-13
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 61 7e-10
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 61 7e-10
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 61 7e-10
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 61 8e-10
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 57 1e-08
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 57 1e-08
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 55 4e-08
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 55 4e-08
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 55 4e-08
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 55 4e-08
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 54 9e-08
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 54 1e-07
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 54 1e-07
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 54 1e-07
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 54 1e-07
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 51 8e-07
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 50 2e-06
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 50 2e-06
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 49 4e-06
AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33... 48 5e-06
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 48 8e-06
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 48 8e-06
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 115/189 (60%), Gaps = 28/189 (14%)
Query: 61 TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
+SQVVGWPP+ ++RMNS +Q T+ E K + K + V + GK
Sbjct: 73 SSQVVGWPPIGSHRMNSL---VNNQATKSAREEEEAGKKKV----KDDEPKDVTKKVNGK 125
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMF--NEPNTVLTCKVGL 178
F+KV MDGV IGRKVDL+AHSSYE LAQ+LEDMF P TV
Sbjct: 126 VQVG-------FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTV------- 171
Query: 179 NGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
G+ + + +L DGSS FVLTYEDKEGDWMLVGDVPW MFI+SV+RLR+M TSE
Sbjct: 172 -----GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226
Query: 239 ANGLDWKNR 247
ANGL +N+
Sbjct: 227 ANGLAARNQ 235
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 115/189 (60%), Gaps = 28/189 (14%)
Query: 61 TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
+SQVVGWPP+ ++RMNS +Q T+ E K + K + V + GK
Sbjct: 74 SSQVVGWPPIGSHRMNSL---VNNQATKSAREEEEAGKKKV----KDDEPKDVTKKVNGK 126
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMF--NEPNTVLTCKVGL 178
F+KV MDGV IGRKVDL+AHSSYE LAQ+LEDMF P TV
Sbjct: 127 VQVG-------FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTV------- 172
Query: 179 NGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
G+ + + +L DGSS FVLTYEDKEGDWMLVGDVPW MFI+SV+RLR+M TSE
Sbjct: 173 -----GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 227
Query: 239 ANGLDWKNR 247
ANGL +N+
Sbjct: 228 ANGLAARNQ 236
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 115/189 (60%), Gaps = 28/189 (14%)
Query: 61 TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
+SQVVGWPP+ ++RMNS +Q T+ E K + K + V + GK
Sbjct: 73 SSQVVGWPPIGSHRMNSL---VNNQATKSAREEEEAGKKKV----KDDEPKDVTKKVNGK 125
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMF--NEPNTVLTCKVGL 178
F+KV MDGV IGRKVDL+AHSSYE LAQ+LEDMF P TV
Sbjct: 126 VQVG-------FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTV------- 171
Query: 179 NGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
G+ + + +L DGSS FVLTYEDKEGDWMLVGDVPW MFI+SV+RLR+M TSE
Sbjct: 172 -----GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSE 226
Query: 239 ANGLDWKNR 247
ANGL +N+
Sbjct: 227 ANGLAARNQ 235
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 114/188 (60%), Gaps = 36/188 (19%)
Query: 59 APTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSII 118
A + QVVGWPP+R YRMNS + AK+ TE N + AV + SD+
Sbjct: 84 ATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQ-----AVNKNRSDS-------- 130
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
+ R+S+FVKV MDG+PIGRK+DL+AH YE+L+ +LE+MF +P K+G
Sbjct: 131 ------TKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKP------KLGS 178
Query: 179 NGVNHGIIAGADRHSK-----LFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
+ D H + L DGSS VLTYEDKEGDWMLVGDVPW MFI SVRRLRI
Sbjct: 179 RTLE------TDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRI 232
Query: 234 MGTSEANG 241
M TSEA G
Sbjct: 233 MKTSEATG 240
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 114/188 (60%), Gaps = 36/188 (19%)
Query: 59 APTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSII 118
A + QVVGWPP+R YRMNS + AK+ TE N + AV + SD+
Sbjct: 84 ATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQ-----AVNKNRSDS-------- 130
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
+ R+S+FVKV MDG+PIGRK+DL+AH YE+L+ +LE+MF +P K+G
Sbjct: 131 ------TKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKP------KLGS 178
Query: 179 NGVNHGIIAGADRHSK-----LFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
+ D H + L DGSS VLTYEDKEGDWMLVGDVPW MFI SVRRLRI
Sbjct: 179 RTLE------TDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRI 232
Query: 234 MGTSEANG 241
M TSEA G
Sbjct: 233 MKTSEATG 240
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 116/190 (61%), Gaps = 36/190 (18%)
Query: 59 APTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSII 118
A + QVVGWPP+R YRMNS + AK+ TE N + + AV + SD+
Sbjct: 84 ATSGQVVGWPPIRTYRMNSMVNQAKASATED-----PNLEISQAVNKNRSDS-------- 130
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
+ R+S+FVKV MDG+PIGRK+DL+AH YE+L+ +LE+MF +P K+G
Sbjct: 131 ------TKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKP------KLGS 178
Query: 179 NGVNHGIIAGADRHSK-----LFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
+ D H + L DGSS VLTYEDKEGDWMLVGDVPW MFI SVRRLRI
Sbjct: 179 RTLE------TDGHMETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRI 232
Query: 234 MGTSEANGLD 243
M TSEA G D
Sbjct: 233 MKTSEATGKD 242
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 113/182 (62%), Gaps = 25/182 (13%)
Query: 61 TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
+SQVVGWPP+ +RMNS ++ + E VV K+ + V +
Sbjct: 67 SSQVVGWPPIGLHRMNSLVNNQAMKAARA-----EEGDGEKKVV-KNDELKDVSMKV--- 117
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNG 180
NP+ + FVKV MDGV IGRKVD+ AHSSYE LAQ+LE+MF T TC+ +
Sbjct: 118 ---NPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFG-MTGTTCREKVKP 173
Query: 181 VNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEAN 240
+ +L DGSS+FVLTYEDKEGDWMLVGDVPW MFI+SV+RLRIMGTSEA+
Sbjct: 174 L------------RLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEAS 221
Query: 241 GL 242
GL
Sbjct: 222 GL 223
>AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein 10
| chr1:1059809-1061026 FORWARD LENGTH=261
Length = 261
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 108/186 (58%), Gaps = 20/186 (10%)
Query: 61 TSQV-VGWPPLRAYRMNSYNSHAKSQVTEV-FNSMVENSKANIAVVRKSSDNGSVDNSII 118
T QV VGWPPLR YR+NS + AKS TE +S ++ VV +D+ S
Sbjct: 90 TRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKS-- 147
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNE-PNTVLTCKV- 176
+R+S+ VKV MDGV IGRKVDL+A SY L ++L+ MF + P+ V
Sbjct: 148 --------SRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQ 199
Query: 177 GLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGT 236
G + SKL DGSS +++TY+DK+GDWMLVGDVPW MF+ SV RLRIM T
Sbjct: 200 GYKTIKETCT------SKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKT 253
Query: 237 SEANGL 242
S G+
Sbjct: 254 SIGAGV 259
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 95/178 (53%), Gaps = 32/178 (17%)
Query: 64 VVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKENR 123
VVGWPP+R++R N + +S + N ++ + KS D E +
Sbjct: 104 VVGWPPVRSFRKN---------LASTSSSKLGNESSHGGQINKSDDG----------EKQ 144
Query: 124 NPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNH 183
+ +FVK+ MDGVPIGRKVDL+A++SYE L+ ++ +F GL
Sbjct: 145 VETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFR----------GLLAAQR 194
Query: 184 GIIAGADRHSK---LFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
I G L DG F LTYED EGD MLVGDVPW MF+SSV+RLR++ +SE
Sbjct: 195 DISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
>AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9636877-9638459 FORWARD LENGTH=338
Length = 338
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 100/192 (52%), Gaps = 47/192 (24%)
Query: 57 NNAPTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVD 114
NNAP + QVVGWPP+R+YR N+ S EV + K + V
Sbjct: 174 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEV------DGKPGLGV----------- 216
Query: 115 NSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTC 174
LFVKV MDG P RKVDL ++SY+ L+ +LE MF+
Sbjct: 217 ----------------LFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS---CFTLG 257
Query: 175 KVGLNGVNHGIIAGADRHS--KLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRR 230
+ GL+G G +R S KL D S FVLTYEDK+GDWMLVGDVPW +F + ++
Sbjct: 258 QCGLHGAQ-----GRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 312
Query: 231 LRIMGTSEANGL 242
L+IM S++ GL
Sbjct: 313 LKIMKGSDSIGL 324
>AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=319
Length = 319
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 100/192 (52%), Gaps = 47/192 (24%)
Query: 57 NNAPTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVD 114
NNAP + QVVGWPP+R+YR N+ S EV + K + V
Sbjct: 157 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEV------DGKPGLGV----------- 199
Query: 115 NSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTC 174
LFVKV MDG P RKVDL ++SY+ L+ +LE MF+
Sbjct: 200 ----------------LFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS---CFTLG 240
Query: 175 KVGLNGVNHGIIAGADRHS--KLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRR 230
+ GL+G G +R S KL D S FVLTYEDK+GDWMLVGDVPW +F + ++
Sbjct: 241 QCGLHGAQ-----GRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 295
Query: 231 LRIMGTSEANGL 242
L+IM S++ GL
Sbjct: 296 LKIMKGSDSIGL 307
>AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 100/192 (52%), Gaps = 47/192 (24%)
Query: 57 NNAPTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVD 114
NNAP + QVVGWPP+R+YR N+ S EV + K + V
Sbjct: 157 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEV------DGKPGLGV----------- 199
Query: 115 NSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTC 174
LFVKV MDG P RKVDL ++SY+ L+ +LE MF+
Sbjct: 200 ----------------LFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS---CFTLG 240
Query: 175 KVGLNGVNHGIIAGADRHS--KLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRR 230
+ GL+G G +R S KL D S FVLTYEDK+GDWMLVGDVPW +F + ++
Sbjct: 241 QCGLHGAQ-----GRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 295
Query: 231 LRIMGTSEANGL 242
L+IM S++ GL
Sbjct: 296 LKIMKGSDSIGL 307
>AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 100/192 (52%), Gaps = 47/192 (24%)
Query: 57 NNAPTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVD 114
NNAP + QVVGWPP+R+YR N+ S EV + K + V
Sbjct: 157 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEV------DGKPGLGV----------- 199
Query: 115 NSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTC 174
LFVKV MDG P RKVDL ++SY+ L+ +LE MF+
Sbjct: 200 ----------------LFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFS---CFTLG 240
Query: 175 KVGLNGVNHGIIAGADRHS--KLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRR 230
+ GL+G G +R S KL D S FVLTYEDK+GDWMLVGDVPW +F + ++
Sbjct: 241 QCGLHGAQ-----GRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQK 295
Query: 231 LRIMGTSEANGL 242
L+IM S++ GL
Sbjct: 296 LKIMKGSDSIGL 307
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 97/181 (53%), Gaps = 33/181 (18%)
Query: 64 VVGWPPLRAYRMN---SYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
VVGWPP+R++R N +S + T ++N K + A
Sbjct: 97 VVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAA----------------- 139
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNG 180
+ P+ + +FVK+ M GVPIGRKVDLSAH+SYE L+ +++ +F GL
Sbjct: 140 KTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFR----------GLLA 189
Query: 181 VNHGIIAGADRH---SKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTS 237
+ + + L DG+ + LTYED EGD MLVGDVPW MF+SSV+RLR++ TS
Sbjct: 190 AQRDFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTS 249
Query: 238 E 238
E
Sbjct: 250 E 250
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 35/190 (18%)
Query: 56 TNNAPTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDN 115
T A +QVVGWPP+R++R NS S ++SQ K +N +
Sbjct: 136 TAPASKAQVVGWPPIRSFRKNSMAS-SQSQ--------------------KPGNNSETEE 174
Query: 116 SIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTC- 174
+ E ++ + L+VKV M+G P RK+DL + SY L+ +LE MF +C
Sbjct: 175 A----EAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMF-------SCF 223
Query: 175 KVGLNGVNHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLR 232
+G G + G S+L D S +V+TYEDK+ DWMLVGDVPW MFI S ++LR
Sbjct: 224 TIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLR 283
Query: 233 IMGTSEANGL 242
IM +SEA GL
Sbjct: 284 IMKSSEAIGL 293
>AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=338
Length = 338
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 38/184 (20%)
Query: 59 APTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSII 118
A +Q+VGWPP+R+YR N+ +A K+SD +
Sbjct: 179 AAKAQIVGWPPVRSYRKNT-----------------------LATTCKNSDE------VD 209
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
G+ +LFVKV MDG P RKVDL ++++Y L+ +LE MF T + G
Sbjct: 210 GRPGSG-----ALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFT---TFTLGQCGS 261
Query: 179 NGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
NG + + L +G ++VLTYEDK+GDWMLVGDVPW MFI ++L+IM +
Sbjct: 262 NGAAGKDMLSETKLKDLLNGK-DYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCD 320
Query: 239 ANGL 242
A GL
Sbjct: 321 AIGL 324
>AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=336
Length = 336
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 38/184 (20%)
Query: 59 APTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSII 118
A +Q+VGWPP+R+YR N+ +A K+SD +
Sbjct: 179 AAKAQIVGWPPVRSYRKNT-----------------------LATTCKNSDE------VD 209
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
G+ +LFVKV MDG P RKVDL ++++Y L+ +LE MF T + G
Sbjct: 210 GRPGSG-----ALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFT---TFTLGQCGS 261
Query: 179 NGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
NG + + L +G ++VLTYEDK+GDWMLVGDVPW MFI ++L+IM +
Sbjct: 262 NGAAGKDMLSETKLKDLLNGK-DYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCD 320
Query: 239 ANGL 242
A GL
Sbjct: 321 AIGL 324
>AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducible
14 | chr4:8348521-8349923 REVERSE LENGTH=228
Length = 228
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 102/195 (52%), Gaps = 49/195 (25%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R YR N ++ N K+ A SS G+V
Sbjct: 75 AQVVGWPPVRNYRKN----------------VMANQKSGEAEEAMSSGGGTV-------- 110
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
FVKV MDG P RKVDL ++SY+ L+ +L MF+ + +G G
Sbjct: 111 ---------AFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFS------SFTMGSYGA 155
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
G+I + SK+ D SS +V +YEDK+GDWMLVGDVPW MF+ S +RLRIM SEA
Sbjct: 156 -QGMIDFMN-ESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEA 213
Query: 240 NGL------DWKNRT 248
GL +KNR+
Sbjct: 214 IGLAPRAMEKFKNRS 228
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 88/187 (47%), Gaps = 60/187 (32%)
Query: 56 TNNAPTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDN 115
T + P +Q+VGWPP+R+YR N+ + +KS G +
Sbjct: 55 TASPPKAQIVGWPPVRSYRKNNVQT------------------------KKSESEGQGN- 89
Query: 116 SIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCK 175
+VKV MDG P RK+DL+ + Y L +SLE+MF
Sbjct: 90 ----------------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK--------- 124
Query: 176 VGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMG 235
G + + GS +FV TYEDK+GDWMLVGDVPW MF+SS +RLRIM
Sbjct: 125 ---------FSVGEYFEREGYKGS-DFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMK 174
Query: 236 TSEANGL 242
SE GL
Sbjct: 175 GSEVKGL 181
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 86/189 (45%), Gaps = 60/189 (31%)
Query: 56 TNNAP--TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSV 113
T +P +Q+VGWPP+R+YR N+ S
Sbjct: 55 TETSPPRKAQIVGWPPVRSYRKNNIQS--------------------------------- 81
Query: 114 DNSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLT 173
K+N + ++VKV MDG P RK+DLS + Y L ++LE MF
Sbjct: 82 ------KKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYF 135
Query: 174 CKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
+ G G S+FV TYEDK+GDWML+GDVPW MFI + +RLRI
Sbjct: 136 ERDGYKG-------------------SDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRI 176
Query: 234 MGTSEANGL 242
M SEA GL
Sbjct: 177 MKGSEAKGL 185
>AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196716 FORWARD LENGTH=243
Length = 243
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 95/183 (51%), Gaps = 35/183 (19%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R YR N + ++ + +G+ + S
Sbjct: 81 AQVVGWPPVRNYRKN-------------------------MMTQQKTSSGAEEASSEKAG 115
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
N + VKV MDG P RKVDL + SY+ L+ +L MF+ + +G G
Sbjct: 116 NFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFS------SFTMGNYGA 169
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
G+I + SKL + SS +V +YEDK+GDWMLVGDVPW MF+ S +RLRIM SEA
Sbjct: 170 -QGMIDFMN-ESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEA 227
Query: 240 NGL 242
GL
Sbjct: 228 VGL 230
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 94/183 (51%), Gaps = 48/183 (26%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R+YR N+ V + S G
Sbjct: 81 AQVVGWPPVRSYR------------------------KNVMVSCQKSSGGP--------- 107
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
++ FVKV MDG P RK+DL + SY+ L+ +L +MF+ + +G +G
Sbjct: 108 ------EAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFS------SFTMGKHGG 155
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
G+I + KL D S ++V +YEDK+GDWMLVGDVPW MF+ + +RLR+M S+A
Sbjct: 156 EEGMIDFMNER-KLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDA 214
Query: 240 NGL 242
GL
Sbjct: 215 IGL 217
>AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein 16
| chr3:1288993-1290415 REVERSE LENGTH=236
Length = 236
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 97/185 (52%), Gaps = 33/185 (17%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R++R N + Q ++ N K + + SS +
Sbjct: 69 AQVVGWPPVRSFRKNVMSG----QKPTTGDATEGNDKTSGSSGATSSASACA-------- 116
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
+ +VKV MDG P RK+DL + +Y+ L+ +L MF+ + +G
Sbjct: 117 -------TVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFS------SFTIG---- 159
Query: 182 NHGIIAGAD--RHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTS 237
N+G D SKL D S++V TYEDK+GDWMLVGDVPW MF+ S +R+RIM S
Sbjct: 160 NYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGS 219
Query: 238 EANGL 242
EA GL
Sbjct: 220 EAIGL 224
>AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid inducible
19 | chr3:5264100-5265378 FORWARD LENGTH=197
Length = 197
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 85/193 (44%), Gaps = 63/193 (32%)
Query: 57 NNAPT--SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVD 114
N++P SQVVGWPP+ +YR NS E S + +
Sbjct: 62 NDSPAAKSQVVGWPPVCSYRKK--------------NSCKEASTTKVGLG---------- 97
Query: 115 NSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTC 174
+VKV MDGVP RK+DL + Y+ LA +L+ +F
Sbjct: 98 -----------------YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLF--------- 131
Query: 175 KVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIM 234
G G+ + G + +V YEDK+GDWML GDVPW MF+ S +RLRIM
Sbjct: 132 --GFRGIGVALKDGDN---------CEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIM 180
Query: 235 GTSEANGLDWKNR 247
S+A G + R
Sbjct: 181 KRSDATGFGLQPR 193
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 84/188 (44%), Gaps = 70/188 (37%)
Query: 57 NNAPT-SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDN 115
+ PT +Q+VGWPP+R+ R N N SV
Sbjct: 53 STPPTKTQIVGWPPVRSSRKN---------------------------------NNSVS- 78
Query: 116 SIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCK 175
+VKV MDG P RK+DL + +Y L ++LE+MF
Sbjct: 79 ----------------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFK--------- 113
Query: 176 VGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMG 235
++ G + + GS FV TYEDK+GDWMLVGDVPW MF SS +RLRIM
Sbjct: 114 ---------VMIGEYCEREGYKGSG-FVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMK 163
Query: 236 TSEANGLD 243
S+A LD
Sbjct: 164 GSDAPALD 171
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 23/105 (21%)
Query: 129 SSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAG 188
+SLFVKV M+GVPIGRK+DL S YE+L ++L MF+ T + C
Sbjct: 71 TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFD---TSIIC------------GN 115
Query: 189 ADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
DR + VLTYEDK+GDWM+VGD+PW MF+ +VRRL+I
Sbjct: 116 RDR--------KHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKI 152
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 61/108 (56%), Gaps = 19/108 (17%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
+VKV MDG P RK+DL + +Y L ++LE+MF G
Sbjct: 76 YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFK------------------FTVGEYS 117
Query: 192 HSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ + GS FV TYEDK+GDWMLVGDVPW MF SS ++LRIM SEA
Sbjct: 118 EREGYKGSG-FVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 25/112 (22%)
Query: 131 LFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGAD 190
L+VK+ M+GVPIGRKV+LSA+++Y+ L+ +++ +F++ ++
Sbjct: 81 LYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDS-------------------- 120
Query: 191 RHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGL 242
+D + + L YED EGD +LVGDVPW MF+S+V+RL ++ TS A L
Sbjct: 121 -----WDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSL 167
>AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 |
chr1:19672670-19673559 REVERSE LENGTH=189
Length = 189
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 79/181 (43%), Gaps = 65/181 (35%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
SQ VGWPP+ +YR N A SKA IG
Sbjct: 69 SQAVGWPPVCSYRRKKNNEEA--------------SKA------------------IG-- 94
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
+VKV MDGVP RK+DL + +SY L LE++F G G+
Sbjct: 95 ----------YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLF-----------GCLGI 133
Query: 182 NHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANG 241
G + K +++ YEDK+ DWMLVGDVPW MF S +RLRI+ S+A G
Sbjct: 134 ------GVAKEGK----KCEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183
Query: 242 L 242
Sbjct: 184 F 184
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 19/104 (18%)
Query: 130 SLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGA 189
S +VKV M+GVPIGRK+DL + + Y L +L+ MFN I A
Sbjct: 82 SFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNAS-----------------ILWA 124
Query: 190 DRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
+ + S VLTY DKEGDWM+VGDVPW MF+SSVRRL+I
Sbjct: 125 EEEDMCSEKSH--VLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 19/104 (18%)
Query: 130 SLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGA 189
S +VKV M+GVPIGRK+DL + + Y L ++L+ MFN I A
Sbjct: 84 SFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNAS-----------------ILWA 126
Query: 190 DRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
+ + S VLTY DKEGDWM+VGDVPW MF+S+VRRL+I
Sbjct: 127 EEEDMCNEKSH--VLTYADKEGDWMMVGDVPWEMFLSTVRRLKI 168
>AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15 |
chr1:30221780-30222702 REVERSE LENGTH=179
Length = 179
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 19/111 (17%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
+VKV +DG RKVDL + Y L +LE+MF + C+V
Sbjct: 88 YVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQ--GIITICRV--------------- 130
Query: 192 HSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGL 242
+ FV TYEDK+GD MLVGDVPW MF+ S +R+R+M T +A GL
Sbjct: 131 --TELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-acetic
acid inducible 5 | chr1:5365764-5366460 REVERSE
LENGTH=163
Length = 163
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 75/183 (40%), Gaps = 68/183 (37%)
Query: 59 APTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSII 118
A SQVVGWPP+ +YR
Sbjct: 49 AKKSQVVGWPPVCSYR-------------------------------------------- 64
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
++N RT+SS +VKV +DG RK+DL + Y+ LA +L+ +F C +
Sbjct: 65 -RKNSLERTKSS-YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFG-------CYINF 115
Query: 179 NGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
+ S V YEDK+GDWML GDVPW MF+ S +RLRIM S
Sbjct: 116 DDTLK---------------ESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRSC 160
Query: 239 ANG 241
G
Sbjct: 161 NRG 163
>AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196214 FORWARD LENGTH=210
Length = 210
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 80/162 (49%), Gaps = 35/162 (21%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R YR N + ++ + +G+ + S
Sbjct: 81 AQVVGWPPVRNYRKN-------------------------MMTQQKTSSGAEEASSEKAG 115
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
N + VKV MDG P RKVDL + SY+ L+ +L MF+ + +G G
Sbjct: 116 NFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFS------SFTMGNYGA 169
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPW 221
G+I + SKL + SS +V +YEDK+GDWMLVGDVPW
Sbjct: 170 -QGMIDFMN-ESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPW 209
>AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29 |
chr4:15583479-15584628 FORWARD LENGTH=251
Length = 251
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 26/181 (14%)
Query: 54 VLTNNAPTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSV 113
V + S+VVGWPP++ M Y S+ + + + I + + N +
Sbjct: 85 VYDDEEENSEVVGWPPVKTC-MIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTT 143
Query: 114 DNSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLT 173
++ + + +RSS++VKVKMDGV I RKVD+ +SYE+L SL MF E
Sbjct: 144 -ATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTE------ 196
Query: 174 CKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
DR +N+ T++ KEGDW+L GDV W +F SV R+ I
Sbjct: 197 ------------YEDCDRE------DTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISI 238
Query: 234 M 234
+
Sbjct: 239 I 239
>AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34 |
chr1:5182256-5183243 REVERSE LENGTH=185
Length = 185
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 20/108 (18%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
+VKV MDG+ +GRKV + H SY TLA LEDMF G+ V+ G+
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMF-----------GMQSVS-GL------ 135
Query: 192 HSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+LF S F L Y D+EG W GDVPW FI SV RLRI ++A
Sbjct: 136 --RLFQMESEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDA 181
>AT1G04550.1 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241375 FORWARD
LENGTH=173
Length = 173
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 12/105 (11%)
Query: 61 TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
+SQVVGWPP+ +RMNS ++ + E VV K+ + V +
Sbjct: 67 SSQVVGWPPIGLHRMNSLVNNQAMKAARA-----EEGDGEKKVV-KNDELKDVSMKV--- 117
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMF 165
NP+ + FVKV MDGV IGRKVD+ AHSSYE LAQ+LE+MF
Sbjct: 118 ---NPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMF 159
>AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32 |
chr2:118385-119219 FORWARD LENGTH=191
Length = 191
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 20/108 (18%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
+VKV +DG+ +GRKV L +Y TLA L DMF G+ V+ G+
Sbjct: 100 YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMF-----------GMQTVS-GL------ 141
Query: 192 HSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+LF S F L Y D+EG W VGDVPW F+ SV R+RI ++A
Sbjct: 142 --RLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDA 187
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 90 FNSMVENSKANIAVVRKSSDNGSVDNSII--GKENRNPRTRSSLFVKVKMDGVPIGRKVD 147
F+S ++ NI S +G + S + +E+++ + RS KV M G +GR +D
Sbjct: 502 FDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSC--TKVHMQGSAVGRAID 559
Query: 148 LSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYE 207
L+ YE L + LE+MF D +L + + + + Y
Sbjct: 560 LTRSECYEDLFKKLEEMF------------------------DIKGELLESTKKWQVVYT 595
Query: 208 DKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLDWKNRTA 249
D E D M+VGD PW F VR++ I E L KN+ A
Sbjct: 596 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLA 637
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 90 FNSMVENSKANIAVVRKSSDNGSVDNSII--GKENRNPRTRSSLFVKVKMDGVPIGRKVD 147
F+S ++ NI S +G + S + +E+++ + RS KV M G +GR +D
Sbjct: 502 FDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSC--TKVHMQGSAVGRAID 559
Query: 148 LSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYE 207
L+ YE L + LE+MF D +L + + + + Y
Sbjct: 560 LTRSECYEDLFKKLEEMF------------------------DIKGELLESTKKWQVVYT 595
Query: 208 DKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLDWKNRTA 249
D E D M+VGD PW F VR++ I E L KN+ A
Sbjct: 596 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLA 637
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 90 FNSMVENSKANIAVVRKSSDNGSVDNSII--GKENRNPRTRSSLFVKVKMDGVPIGRKVD 147
F+S ++ NI S +G + S + +E+++ + RS KV M G +GR +D
Sbjct: 499 FDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSC--TKVHMQGSAVGRAID 556
Query: 148 LSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYE 207
L+ YE L + LE+MF D +L + + + + Y
Sbjct: 557 LTRSECYEDLFKKLEEMF------------------------DIKGELLESTKKWQVVYT 592
Query: 208 DKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLDWKNRTA 249
D E D M+VGD PW F VR++ I E L KN+ A
Sbjct: 593 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLA 634
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 90 FNSMVENSKANIAVVRKSSDNGSVDNSII--GKENRNPRTRSSLFVKVKMDGVPIGRKVD 147
F+S ++ NI S +G + S + +E+++ + RS KV M G +GR +D
Sbjct: 497 FDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQIRSC--TKVHMQGSAVGRAID 554
Query: 148 LSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYE 207
L+ YE L + LE+MF D +L + + + + Y
Sbjct: 555 LTRSECYEDLFKKLEEMF------------------------DIKGELLESTKKWQVVYT 590
Query: 208 DKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLDWKNRTA 249
D E D M+VGD PW F VR++ I E L KN+ A
Sbjct: 591 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLA 632
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 32/150 (21%)
Query: 96 NSKANIAVVRKSSDNGSVDNS---IIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHS 152
+ K+ I+ V + + S + K++ + R+R+ KV+M GVP+GR VDL+A
Sbjct: 490 DPKSEISKVSEEKKQEPAEGSPKEVQSKQSSSTRSRT----KVQMQGVPVGRAVDLNALK 545
Query: 153 SYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGD 212
Y L +E +F+ I G R + + + + D EGD
Sbjct: 546 GYNELIDDIEKLFD-------------------IKGELR------SRNQWEIVFTDDEGD 580
Query: 213 WMLVGDVPWWMFISSVRRLRIMGTSEANGL 242
MLVGD PW F + V+R+ I E +
Sbjct: 581 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 610
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 32/150 (21%)
Query: 96 NSKANIAVVRKSSDNGSVDNS---IIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHS 152
+ K+ I+ V + + S + K++ + R+R+ KV+M GVP+GR VDL+A
Sbjct: 488 DPKSEISKVSEEKKQEPAEGSPKEVQSKQSSSTRSRT----KVQMQGVPVGRAVDLNALK 543
Query: 153 SYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGD 212
Y L +E +F+ I G R + + + + D EGD
Sbjct: 544 GYNELIDDIEKLFD-------------------IKGELR------SRNQWEIVFTDDEGD 578
Query: 213 WMLVGDVPWWMFISSVRRLRIMGTSEANGL 242
MLVGD PW F + V+R+ I E +
Sbjct: 579 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 608
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 125 PRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHG 184
PR R+ + KV+ G +GR +D+++ YE L ++E MF GL G+
Sbjct: 790 PRVRT--YTKVQKTGS-VGRSIDVTSFKDYEELKSAIECMF-----------GLEGLL-- 833
Query: 185 IIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGL 242
H + SS + L Y D E D +LVGD PW F+ VR +RI+ +E +
Sbjct: 834 ------THPQ----SSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQM 881
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 29/141 (20%)
Query: 106 KSSDNGSVDNSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMF 165
K D S ++ K+ + R+R +KV+M G +GR VDL+ SY+ L + LE MF
Sbjct: 470 KCQDPNSSNSPKEQKQQTSTRSR----IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF 525
Query: 166 NEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFI 225
G ++ D+ + + + D EGD MLVGD PW F
Sbjct: 526 E---------------IEGELSPKDK----------WAIVFTDDEGDRMLVGDDPWNEFC 560
Query: 226 SSVRRLRIMGTSEANGLDWKN 246
++L I + E + K+
Sbjct: 561 KMAKKLFIYPSDEVKKMRSKS 581
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 29/141 (20%)
Query: 106 KSSDNGSVDNSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMF 165
K D S ++ K+ + R+R +KV+M G +GR VDL+ SY+ L + LE MF
Sbjct: 491 KCQDPNSSNSPKEQKQQTSTRSR----IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF 546
Query: 166 NEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFI 225
G ++ D+ + + + D EGD MLVGD PW F
Sbjct: 547 E---------------IEGELSPKDK----------WAIVFTDDEGDRMLVGDDPWNEFC 581
Query: 226 SSVRRLRIMGTSEANGLDWKN 246
++L I + E + K+
Sbjct: 582 KMAKKLFIYPSDEVKKMRSKS 602
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 29/141 (20%)
Query: 106 KSSDNGSVDNSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMF 165
K D S ++ K+ + R+R +KV+M G +GR VDL+ SY+ L + LE MF
Sbjct: 383 KCQDPNSSNSPKEQKQQTSTRSR----IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF 438
Query: 166 NEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFI 225
G ++ D+ + + + D EGD MLVGD PW F
Sbjct: 439 E---------------IEGELSPKDK----------WAIVFTDDEGDRMLVGDDPWNEFC 473
Query: 226 SSVRRLRIMGTSEANGLDWKN 246
++L I + E + K+
Sbjct: 474 KMAKKLFIYPSDEVKKMRSKS 494
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 29/126 (23%)
Query: 120 KENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLN 179
K+ + R+R+ KV+M G+ +GR VDL+ SY+ L LE+MF
Sbjct: 483 KKQQTSRSRT----KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFE------------- 525
Query: 180 GVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
G + D+ +++ + D EGD ML GD PW F +++ I + E
Sbjct: 526 --IQGQLLARDK----------WIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEV 573
Query: 240 NGLDWK 245
+ K
Sbjct: 574 KKMTTK 579
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 133 VKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRH 192
KV G+ +GR VDLS +YE L L+ +F NG
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE-----------FNG------------ 772
Query: 193 SKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLD 243
+L ++++ Y D+E D MLVGD PW F VR++ I E ++
Sbjct: 773 -ELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 133 VKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRH 192
KV G+ +GR VDLS +YE L L+ +F NG
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE-----------FNG------------ 772
Query: 193 SKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLD 243
+L ++++ Y D+E D MLVGD PW F VR++ I E ++
Sbjct: 773 -ELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 133 VKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRH 192
KV G+ +GR VDLS +YE L L+ +F NG
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE-----------FNG------------ 772
Query: 193 SKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLD 243
+L ++++ Y D+E D MLVGD PW F VR++ I E ++
Sbjct: 773 -ELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 133 VKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRH 192
KV G+ +GR VDLS +YE L L+ +F NG
Sbjct: 736 TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE-----------FNG------------ 772
Query: 193 SKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLD 243
+L ++++ Y D+E D MLVGD PW F VR++ I E ++
Sbjct: 773 -ELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 25/116 (21%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
KV M GV I R VDL+A Y L Q LE++F+ + + T
Sbjct: 435 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRT------------------ 476
Query: 192 HSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGLDWKNR 247
+ + + + + EG MLVGD PW F + +R+ I E + KN+
Sbjct: 477 -------RNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNK 525
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 34/149 (22%)
Query: 99 ANIAVVRKSS---DNGSVDNSI-IGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSY 154
N+A+ SS ++G + +S +G EN +S+ FVKV G GR +D+S SSY
Sbjct: 765 GNLAMTTPSSCIDESGFLQSSENLGSEN----PQSNTFVKVYKSGS-FGRSLDISKFSSY 819
Query: 155 ETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDG-SSNFVLTYEDKEGDW 213
L L MF GL G +L D S + L + D+E D
Sbjct: 820 HELRSELARMF-----------GLEG-------------QLEDPVRSGWQLVFVDRENDV 855
Query: 214 MLVGDVPWWMFISSVRRLRIMGTSEANGL 242
+L+GD PW F+SSV ++I+ E +
Sbjct: 856 LLLGDDPWPEFVSSVWCIKILSPQEVQQM 884
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 34/145 (23%)
Query: 99 ANIAVVRKSS---DNGSVDNSI-IGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSY 154
N+A+ SS ++G + +S +G EN +S+ FVKV G GR +D+S SSY
Sbjct: 763 GNLAMTTPSSCIDESGFLQSSENLGSEN----PQSNTFVKVYKSGS-FGRSLDISKFSSY 817
Query: 155 ETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDG-SSNFVLTYEDKEGDW 213
L L MF GL G +L D S + L + D+E D
Sbjct: 818 HELRSELARMF-----------GLEG-------------QLEDPVRSGWQLVFVDRENDV 853
Query: 214 MLVGDVPWWMFISSVRRLRIMGTSE 238
+L+GD PW F+SSV ++I+ E
Sbjct: 854 LLLGDDPWPEFVSSVWCIKILSPQE 878
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor 19
| chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 28/122 (22%)
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
N+ R R+ + KV+ G +GR +D++ +S Y+ L L MF G+ G
Sbjct: 952 NQTQRMRT--YTKVQKRGS-VGRSIDVTRYSGYDELRHDLARMF-----------GIEG- 996
Query: 182 NHGIIAGADRHSKLFDG-SSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEAN 240
+L D +S++ L Y D E D +LVGD PW F++ V+ ++I+ + E
Sbjct: 997 ------------QLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQ 1044
Query: 241 GL 242
+
Sbjct: 1045 QM 1046
>AT5G57420.1 | Symbols: IAA33 | indole-3-acetic acid inducible 33 |
chr5:23270024-23270959 FORWARD LENGTH=171
Length = 171
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 137 MDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKL- 195
++G I +++ L H SY++LA +L MF + GAD L
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMF--------------------VDGADSTDDLD 118
Query: 196 -FDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIM 234
+ ++ YED E D +L GD+ W F+ +R+RI+
Sbjct: 119 LSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Query: 134 KVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHS 193
KV+M GV IGR VDLS + Y+ L LE +F+ K L N IA
Sbjct: 499 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD-------LKGQLQTRNQWKIA------ 545
Query: 194 KLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ D +G MLVGD PW F V+++ I E
Sbjct: 546 ------------FTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEV 579
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Query: 134 KVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHS 193
KV+M GV IGR VDLS + Y+ L LE +F+ K L N IA
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD-------IKGQLQTRNQWKIA------ 561
Query: 194 KLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ D +G MLVGD PW F V+++ I E
Sbjct: 562 ------------FTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEV 595