Miyakogusa Predicted Gene

Lj1g3v4515700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4515700.1 Non Chatacterized Hit- tr|I3SF08|I3SF08_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
no description,Rho GDP-dissociation inhibitor domain; E set
domains,Immunoglobulin E-set; ,CUFF.32511.1
         (236 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G62450.1 | Symbols:  | Immunoglobulin E-set superfamily prote...   185   2e-47
AT3G07880.1 | Symbols: SCN1 | Immunoglobulin E-set superfamily p...   183   8e-47
AT1G12070.1 | Symbols:  | Immunoglobulin E-set superfamily prote...   174   3e-44

>AT1G62450.1 | Symbols:  | Immunoglobulin E-set superfamily protein
           | chr1:23115958-23117370 REVERSE LENGTH=223
          Length = 223

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/174 (52%), Positives = 122/174 (70%), Gaps = 2/174 (1%)

Query: 64  GPLLSLKEQIERDKEDESLRRWKEKLLGCLE-SDLDAQVDPEVKFHSIGILSEDFGEIVT 122
           GP+++LKEQ+ERDK+DESLRRWKE+LLG ++  D+    DP VK   + I S D  E+V 
Sbjct: 48  GPMIALKEQLERDKDDESLRRWKEQLLGVVDLEDVGETPDPVVKILDLTIRSPDREEMVL 107

Query: 123 PLPVEESQNGR-PLFTLWEGSCYQLKLKFSVLHNIVSGLTYSNTVWKGGFQVDQSKGMLG 181
            +P +   N + P FT+ EGS Y L   F V +NIVSGL Y+NTVWK G +VD +K MLG
Sbjct: 108 TIPEDGLPNPKGPWFTIKEGSKYTLVFNFRVTNNIVSGLRYNNTVWKTGVKVDSTKAMLG 167

Query: 182 TFAPQKEPYVYALKEDTTPSGALARGVYSAKLKFEDDDKRCHMELKYLFEIKKS 235
           TF+PQ E Y + + E+ TPSG  ARG YSA+ KF DDD +C++E+ Y F+I+KS
Sbjct: 168 TFSPQAESYQHVMPEEMTPSGMFARGSYSARTKFIDDDNKCYLEINYTFDIRKS 221


>AT3G07880.1 | Symbols: SCN1 | Immunoglobulin E-set superfamily
           protein | chr3:2514175-2515544 FORWARD LENGTH=240
          Length = 240

 Score =  183 bits (465), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 91/175 (52%), Positives = 126/175 (72%), Gaps = 8/175 (4%)

Query: 64  GPLLSLKEQIERDKEDESLRRWKEKLLGCLE-SDLDAQVDPEVKFHSIGILSEDFGEIVT 122
           GP  ++KE +E+DK+DESLR+WKE+LLG ++ +++   +DPEV+  S+ I+S    +IV 
Sbjct: 65  GPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVL 124

Query: 123 PLPVEESQNGRP---LFTLWEGSCYQLKLKFSVLHNIVSGLTYSNTVWKGGFQVDQSKGM 179
            +P    +NG P    FTL EGS Y LK  F V +NIVSGL Y+NTVWK G +VD++K M
Sbjct: 125 LVP----ENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEM 180

Query: 180 LGTFAPQKEPYVYALKEDTTPSGALARGVYSAKLKFEDDDKRCHMELKYLFEIKK 234
           LGTF+PQ EPY + + E+TTPSG  ARG YSA+ KF DDD +C++E+ Y F+I+K
Sbjct: 181 LGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRK 235


>AT1G12070.1 | Symbols:  | Immunoglobulin E-set superfamily protein
           | chr1:4078913-4080106 REVERSE LENGTH=223
          Length = 223

 Score =  174 bits (442), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 91/178 (51%), Positives = 121/178 (67%), Gaps = 10/178 (5%)

Query: 64  GPLLSLKEQIERDKEDESLRRWKEKLLGCLE-SDLDAQVDPEVKFHSIGILSEDFGEIVT 122
           GP+++LKEQ+E+DK+DESLRRWKE+LLG ++  ++    DP VK  ++ I S D  ++V 
Sbjct: 48  GPMIALKEQLEKDKDDESLRRWKEQLLGSVDLEEVGETPDPLVKILTLTIRSPDREDMVL 107

Query: 123 PLPVEESQNGRPL-----FTLWEGSCYQLKLKFSVLHNIVSGLTYSNTVWKGGFQVDQSK 177
            +P    +NG+P      FTL EGS Y L   F V +NIVSGL YSNTVWK G +V   K
Sbjct: 108 TIP----ENGKPASKGPWFTLKEGSKYTLIFTFRVTNNIVSGLQYSNTVWKTGIKVYSRK 163

Query: 178 GMLGTFAPQKEPYVYALKEDTTPSGALARGVYSAKLKFEDDDKRCHMELKYLFEIKKS 235
            MLGTF+PQ EPY + + E+T PSG L RG YS K KF DDD +C++E  Y F+I+K+
Sbjct: 164 EMLGTFSPQAEPYTHVMFEETAPSGLLVRGSYSVKSKFVDDDNQCYLENNYTFDIRKN 221