Miyakogusa Predicted Gene

Lj1g3v4515620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4515620.1 Non Chatacterized Hit- tr|I3S9J9|I3S9J9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,PCS,Phytochelatin synthase; Phytochelatin,Phytochelatin
synthase; SUBFAMILY NOT NAMED,NULL; FAMILY
N,NODE_75095_length_443_cov_33.478554.path1.1
         (87 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44070.1 | Symbols: CAD1, ARA8, ATPCS1, PCS1 | phytochelatin ...   159   5e-40
AT1G03980.1 | Symbols: ATPCS2, PCS2 | phytochelatin synthase 2 |...   146   3e-36

>AT5G44070.1 | Symbols: CAD1, ARA8, ATPCS1, PCS1 | phytochelatin
          synthase 1 (PCS1) | chr5:17734876-17737672 FORWARD
          LENGTH=485
          Length = 485

 Score =  159 bits (401), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 72/87 (82%), Positives = 80/87 (91%)

Query: 1  MASAGLYRRVLPSPPAIDFASPEGKKIFVEALGQGTMEGFFKLVSYYQTQSEPAYCGLAT 60
          MA A LYRR LPSPPAIDF+S EGK IF EAL +GTMEGFF+L+SY+QTQSEPAYCGLA+
Sbjct: 1  MAMASLYRRSLPSPPAIDFSSAEGKLIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLAS 60

Query: 61 LTVVLNALSIDPGRKWKGPWRWFDDSM 87
          L+VVLNALSIDPGRKWKGPWRWFD+SM
Sbjct: 61 LSVVLNALSIDPGRKWKGPWRWFDESM 87


>AT1G03980.1 | Symbols: ATPCS2, PCS2 | phytochelatin synthase 2 |
          chr1:1019311-1021871 REVERSE LENGTH=452
          Length = 452

 Score =  146 bits (369), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 79/87 (90%), Gaps = 1/87 (1%)

Query: 1  MASAGLYRRVLPSPPAIDFASPEGKKIFVEALGQGTMEGFFKLVSYYQTQSEPAYCGLAT 60
          M+ A LYRR L SPPAIDFAS EGK+IF EAL +GTMEGFF L+SY+QTQSEPA+CGLA+
Sbjct: 1  MSMASLYRRSL-SPPAIDFASFEGKQIFNEALQKGTMEGFFGLISYFQTQSEPAFCGLAS 59

Query: 61 LTVVLNALSIDPGRKWKGPWRWFDDSM 87
          L++VLN+LSIDPGRKWKGPWRWFD+SM
Sbjct: 60 LSMVLNSLSIDPGRKWKGPWRWFDESM 86