Miyakogusa Predicted Gene

Lj1g3v4483850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4483850.1 Non Chatacterized Hit- tr|D8QNN5|D8QNN5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,39.77,0.00000001,seg,NULL,CUFF.32479.1
         (156 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20515.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   183   3e-47
AT2G16630.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...    51   3e-07
AT2G42840.1 | Symbols: PDF1 | protodermal factor 1 | chr2:178263...    48   2e-06

>AT2G20515.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 16 plant structures; EXPRESSED
           DURING: 7 growth stages; Has 71 Blast hits to 71
           proteins in 14 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr2:8839041-8839595 REVERSE LENGTH=155
          Length = 155

 Score =  183 bits (465), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 103/123 (83%), Gaps = 1/123 (0%)

Query: 35  PGFIYTRSRGRCTPQFWSGRREAWPRMVPETSTVTNVFGSRV-YERYRSDLTLLEATERN 93
           PGFIYTR RGRCTPQ+WS +REAWPRMVPE STV  +FG  V  ER+RSDLTL+E+T RN
Sbjct: 33  PGFIYTRHRGRCTPQYWSSQREAWPRMVPERSTVEKIFGVMVAKERWRSDLTLVESTARN 92

Query: 94  DEEGNPFRALLKEGTAALLNSYAREGFPYKPWQVKTLLIQALVSEASATSQAKHFSLANH 153
           DEEGN + ALLK+G AAL+NSYAR+ F Y PW+VKT+LIQA+VSE++A  QA+HF++AN 
Sbjct: 93  DEEGNAYGALLKQGIAALINSYARKSFSYAPWEVKTMLIQAMVSESAARRQAEHFAVANV 152

Query: 154 ACS 156
           AC 
Sbjct: 153 ACD 155


>AT2G16630.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr2:7209286-7210872 FORWARD LENGTH=359
          Length = 359

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 46  CTPQFWSG--RREAWPRMVPETSTVTNVFGSRVYERYRSDLTLLEATERNDEEGNPFRAL 103
           C+ Q W     R  W  + P+T  V   FG      Y +D+T+ EA    D  G  ++ L
Sbjct: 243 CSHQLWMKPEYRCYWRAIGPDTK-VAVAFGLVAGRIYGTDMTVREAL---DGRGEAYKTL 298

Query: 104 LKEGTAALLNSYAREGFPYKPWQVKTLLIQALV--SEASATSQAKHFSLAN 152
           L+E T ALLNSY   GFPY    V T    AL+  SE      A  F  AN
Sbjct: 299 LREATTALLNSYNSLGFPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKAN 349


>AT2G42840.1 | Symbols: PDF1 | protodermal factor 1 |
           chr2:17826327-17827426 REVERSE LENGTH=306
          Length = 306

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 67  TVTNVFGS----RVYERYRSDLTLLEATERNDEEGNPFRALLKEGTAALLNSYAREGFPY 122
           TV   FG+         +   + LL+A   ++   +P  AL +EGTA+ LNS     FP+
Sbjct: 211 TVGGAFGTVSIPSSIPGFDPHMNLLQA--LSNTRSDPIGALYREGTASWLNSMVNHKFPF 268

Query: 123 KPWQVKTLLIQALVSEASATSQAKHFSLANHA 154
              QV+   +  L S  +AT QA  F LAN  
Sbjct: 269 TTPQVRDHFVAGLSSNKAATKQAHTFKLANEG 300