Miyakogusa Predicted Gene

Lj1g3v4483610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4483610.1 Non Chatacterized Hit- tr|I1JP27|I1JP27_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,89.81,0,AUTOPHAGY
PROTEIN 9,NULL; APG9 AUTOPHAGY 9,Autophagy-related protein 9;
APG9,Autophagy-related prote,CUFF.32464.1
         (540 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31260.1 | Symbols: APG9, ATAPG9 | autophagy 9 (APG9) | chr2:...   870   0.0  

>AT2G31260.1 | Symbols: APG9, ATAPG9 | autophagy 9 (APG9) |
           chr2:13322291-13326293 REVERSE LENGTH=866
          Length = 866

 Score =  870 bits (2247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/541 (76%), Positives = 472/541 (87%), Gaps = 1/541 (0%)

Query: 1   MFSRPRGVNAFSIFKWKE-QGASSLTTDLLNDIPPEIELANYGKIPTPGSESPSGLLNGE 59
           M S  +G N  + FKW+  + +SSLTT LL++   EIEL+NYG IP+PGSESPSGLLNGE
Sbjct: 2   MSSGHKGPNVRNFFKWQRGESSSSLTTGLLHNESHEIELSNYGGIPSPGSESPSGLLNGE 61

Query: 60  SLNVEPITDLDLFFERLYSYYCEKGLWCILTKWIVELLSLGFTICFSGFFLLYVDWNGLR 119
           SLNV+PI DLDLF ERLYSYY +KGLWCI+ KW VELLSLGF ICFSGFFLLYVDWNGL+
Sbjct: 62  SLNVQPIADLDLFVERLYSYYRDKGLWCIIVKWAVELLSLGFIICFSGFFLLYVDWNGLQ 121

Query: 120 NAKCGMDAVESGIKPCDLAKEALNEHPLTPLTLTKAIIVGYLGIFSIYWIFCFLRFFAQL 179
           NAKCGMDAVESG KPCDL KEA++ HPL+P TLT AIIVGYL +FS+YW+FCFLRFFAQL
Sbjct: 122 NAKCGMDAVESGTKPCDLVKEAIHPHPLSPFTLTTAIIVGYLALFSVYWLFCFLRFFAQL 181

Query: 180 KYTLEIRQFYYNTLHVTDNELQTMPWATILDKVILVQSTRPLCVVKDLSAHDIIMRLMRK 239
           K TL+ R FYYN LHVTDNE+ TMPWAT+L+KV+ +QS++ LCVVKDLSAHD++MRLMRK
Sbjct: 182 KDTLDFRHFYYNNLHVTDNEILTMPWATVLEKVVQLQSSQCLCVVKDLSAHDMVMRLMRK 241

Query: 240 ENYLIGLLNKGVLAFPISPWVPGAGPRVKSSSNGTQYHLILTKTLEWTLNWCILQSMFDR 299
           ENYLIG+LNKG+L+FPIS W+PGAGP VKS+ +GTQYHL+LTKTLEWTLNWCILQSMFD 
Sbjct: 242 ENYLIGMLNKGLLSFPISHWIPGAGPAVKSAPDGTQYHLVLTKTLEWTLNWCILQSMFDC 301

Query: 300 NFHVRRDFVSNPKTLQKRLVVVGFVMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRR 359
           NF VRRDFVSNP TL+KRL VVG  MLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRR
Sbjct: 302 NFRVRRDFVSNPTTLKKRLFVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRR 361

Query: 360 WSNLSRWIFREFNEVEHLFRHRINNSVLHASDYVKQFPSPIISIIAKFISFVXXXXXXXX 419
           WSNLS+W+FREFNEV+HLF+HRIN+SV+HAS+Y+KQFPSPIISIIAKF+SFV        
Sbjct: 362 WSNLSKWLFREFNEVDHLFKHRINSSVVHASEYLKQFPSPIISIIAKFVSFVSGGFAAVL 421

Query: 420 XXXXXXXXXXXXGHIFGRNLFWYAAVFGTITAISRAAIANELLVLDPEGAISMVVQHTHY 479
                       GHIFGRNLFWYAAVFGTITAISRAAI++ELLVLDP G +S+VVQ+THY
Sbjct: 422 IIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAISDELLVLDPVGTMSLVVQNTHY 481

Query: 480 MPKRWRGKESTEKVRIEFETLFQYTGMMLLEEMASIFLTPYLLLFIVPKRVDDILQFIAD 539
           MPKRWRGKE+ + VR+E ETLFQYTGMMLLEE+ASIF+TP+LL+F+VPKRVDDILQFI D
Sbjct: 482 MPKRWRGKENKDDVRLELETLFQYTGMMLLEEIASIFITPFLLMFVVPKRVDDILQFIKD 541

Query: 540 F 540
           F
Sbjct: 542 F 542