Miyakogusa Predicted Gene
- Lj1g3v4483600.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4483600.2 Non Chatacterized Hit- tr|K4CUQ3|K4CUQ3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,38.65,2e-16,
,CUFF.32476.2
(405 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31280.3 | Symbols: CPUORF7 | conserved peptide upstream open... 81 1e-15
AT2G31280.1 | Symbols: CPUORF7 | conserved peptide upstream open... 81 1e-15
AT2G31280.2 | Symbols: CPUORF7 | conserved peptide upstream open... 70 3e-12
AT1G06150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 8e-11
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 64 3e-10
>AT2G31280.3 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339678-13343424 FORWARD
LENGTH=737
Length = 737
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 197/432 (45%), Gaps = 57/432 (13%)
Query: 4 VTHIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDTEKTTNSE 63
V HIR+ FL+ +D H + ++ +S P++ E L ++ C + +K + E
Sbjct: 142 VNHIRHLFLALRDPLADHAANLRQCNMNNSLCLPKMPSEGLHAEAFPDCSGEVDKAMDVE 201
Query: 64 KVDVLTPLQSSERNYAPHS----------AYEKLTDMATLEGPEF--RSDETFLLPTISN 111
+ ++LT ++ + P++ A + + ++G S TF P +
Sbjct: 202 ESNILTQYKTRRSDSMPYNTPSSCLVMEKAAQVVGGREVVQGSTCGSYSGVTFGFPV--D 259
Query: 112 MINVEHQEFEEMRHLNERRCRGDSSGCKNMSLESENATSVLNNSVINNTSFNALIHSSEK 171
++ +H+ + + G +SGCK+ N + N V+N+TS +AL +E+
Sbjct: 260 LVGAKHENQVGTNIIRDAPHVGMTSGCKDSRDLDPNLHLYMKNHVLNDTSTSALAIEAER 319
Query: 172 VSADSACFPSVFLDTVVCESDKLLRVDAGHNEMLSFTALSDVNSQKHTKKSE------CQ 225
+ S +P LD+ + + + + HNE+ LS+ K+ K++E C+
Sbjct: 320 L-ITSQSYPR--LDSTFQATSRTDKESSYHNEVFQ---LSENQGNKYIKETERMLGRNCE 373
Query: 226 TEPCDKDTSYFQPEPCCKDTSYMMSKFPAGCELHEALGPAFLKGSKCFDWLAQVNQDMKT 285
+ D S + Y AG EL EALG AF + + + L + ++ T
Sbjct: 374 SSQFDALIS----------SGYTF----AGSELLEALGSAFKQTNTGQEELLK-SEHGST 418
Query: 286 VDMPDEISTSQLTSESRPEHLLEAMVANISHSNNDNNGELSFCTSMQSAMTSGKNPEASL 345
+ D++S SQLT + PE+LL+A+VAN+ + + ++ S+QS +T+ + E S
Sbjct: 419 MRPTDDMSHSQLTFDPGPENLLDAVVANVCQRDGNARDDMMSSRSVQSLLTNMELAEPSG 478
Query: 346 HNVHS-VNSKAYSIDHPSLLREDKHHSLSSSTCPGSYS-------------EQFERSSEP 391
H+ VN +++ P + D + SS C G++S +QF+ S +
Sbjct: 479 QKKHNIVNPINSAMNQPPMAEVDTQQN-SSDIC-GAFSSIGFSSTYPSSSSDQFQTSLDI 536
Query: 392 SKNSKNKARPRE 403
K +K +A+P E
Sbjct: 537 PKKNKKRAKPGE 548
>AT2G31280.1 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339678-13343424 FORWARD
LENGTH=720
Length = 720
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 197/432 (45%), Gaps = 57/432 (13%)
Query: 4 VTHIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDTEKTTNSE 63
V HIR+ FL+ +D H + ++ +S P++ E L ++ C + +K + E
Sbjct: 142 VNHIRHLFLALRDPLADHAANLRQCNMNNSLCLPKMPSEGLHAEAFPDCSGEVDKAMDVE 201
Query: 64 KVDVLTPLQSSERNYAPHS----------AYEKLTDMATLEGPEF--RSDETFLLPTISN 111
+ ++LT ++ + P++ A + + ++G S TF P +
Sbjct: 202 ESNILTQYKTRRSDSMPYNTPSSCLVMEKAAQVVGGREVVQGSTCGSYSGVTFGFPV--D 259
Query: 112 MINVEHQEFEEMRHLNERRCRGDSSGCKNMSLESENATSVLNNSVINNTSFNALIHSSEK 171
++ +H+ + + G +SGCK+ N + N V+N+TS +AL +E+
Sbjct: 260 LVGAKHENQVGTNIIRDAPHVGMTSGCKDSRDLDPNLHLYMKNHVLNDTSTSALAIEAER 319
Query: 172 VSADSACFPSVFLDTVVCESDKLLRVDAGHNEMLSFTALSDVNSQKHTKKSE------CQ 225
+ S +P LD+ + + + + HNE+ LS+ K+ K++E C+
Sbjct: 320 L-ITSQSYPR--LDSTFQATSRTDKESSYHNEVFQ---LSENQGNKYIKETERMLGRNCE 373
Query: 226 TEPCDKDTSYFQPEPCCKDTSYMMSKFPAGCELHEALGPAFLKGSKCFDWLAQVNQDMKT 285
+ D S + Y AG EL EALG AF + + + L + ++ T
Sbjct: 374 SSQFDALIS----------SGYTF----AGSELLEALGSAFKQTNTGQEELLK-SEHGST 418
Query: 286 VDMPDEISTSQLTSESRPEHLLEAMVANISHSNNDNNGELSFCTSMQSAMTSGKNPEASL 345
+ D++S SQLT + PE+LL+A+VAN+ + + ++ S+QS +T+ + E S
Sbjct: 419 MRPTDDMSHSQLTFDPGPENLLDAVVANVCQRDGNARDDMMSSRSVQSLLTNMELAEPSG 478
Query: 346 HNVHS-VNSKAYSIDHPSLLREDKHHSLSSSTCPGSYS-------------EQFERSSEP 391
H+ VN +++ P + D + SS C G++S +QF+ S +
Sbjct: 479 QKKHNIVNPINSAMNQPPMAEVDTQQN-SSDIC-GAFSSIGFSSTYPSSSSDQFQTSLDI 536
Query: 392 SKNSKNKARPRE 403
K +K +A+P E
Sbjct: 537 PKKNKKRAKPGE 548
>AT2G31280.2 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339430-13343309 FORWARD
LENGTH=723
Length = 723
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 182/400 (45%), Gaps = 57/400 (14%)
Query: 36 QPEVLKENLSSDIMHVCLHDTEKTTNSEKVDVLTPLQSSERNYAPHS----------AYE 85
+P++ E L ++ C + +K + E+ ++LT ++ + P++ A +
Sbjct: 146 KPKMPSEGLHAEAFPDCSGEVDKAMDVEESNILTQYKTRRSDSMPYNTPSSCLVMEKAAQ 205
Query: 86 KLTDMATLEGPEF--RSDETFLLPTISNMINVEHQEFEEMRHLNERRCRGDSSGCKNMSL 143
+ ++G S TF P +++ +H+ + + G +SGCK+
Sbjct: 206 VVGGREVVQGSTCGSYSGVTFGFPV--DLVGAKHENQVGTNIIRDAPHVGMTSGCKDSRD 263
Query: 144 ESENATSVLNNSVINNTSFNALIHSSEKVSADSACFPSVFLDTVVCESDKLLRVDAGHNE 203
N + N V+N+TS +AL +E++ S +P LD+ + + + + HNE
Sbjct: 264 LDPNLHLYMKNHVLNDTSTSALAIEAERL-ITSQSYPR--LDSTFQATSRTDKESSYHNE 320
Query: 204 MLSFTALSDVNSQKHTKKSE------CQTEPCDKDTSYFQPEPCCKDTSYMMSKFPAGCE 257
+ LS+ K+ K++E C++ D S + Y AG E
Sbjct: 321 VFQ---LSENQGNKYIKETERMLGRNCESSQFDALIS----------SGYTF----AGSE 363
Query: 258 LHEALGPAFLKGSKCFDWLAQVNQDMKTVDMPDEISTSQLTSESRPEHLLEAMVANISHS 317
L EALG AF + + + L + ++ T+ D++S SQLT + PE+LL+A+VAN+
Sbjct: 364 LLEALGSAFKQTNTGQEELLK-SEHGSTMRPTDDMSHSQLTFDPGPENLLDAVVANVCQR 422
Query: 318 NNDNNGELSFCTSMQSAMTSGKNPEASLHNVHS-VNSKAYSIDHPSLLREDKHHSLSSST 376
+ + ++ S+QS +T+ + E S H+ VN +++ P + D + SS
Sbjct: 423 DGNARDDMMSSRSVQSLLTNMELAEPSGQKKHNIVNPINSAMNQPPMAEVDTQQN-SSDI 481
Query: 377 CPGSYS-------------EQFERSSEPSKNSKNKARPRE 403
C G++S +QF+ S + K +K +A+P E
Sbjct: 482 C-GAFSSIGFSSTYPSSSSDQFQTSLDIPKKNKKRAKPGE 520
>AT1G06150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1869228-1873194 REVERSE
LENGTH=734
Length = 734
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 192/438 (43%), Gaps = 68/438 (15%)
Query: 4 VTHIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDT------- 56
VTHIR+ FL+ D H + M + S S +P++ + CLH+
Sbjct: 149 VTHIRHLFLALTDPLADHASNLMQCDINSPSDRPKIPSK---------CLHEASPDFSGE 199
Query: 57 -EKTTNSEKVDVLTPLQSSERNYAPHS----------AYEKLTDMATLEGPEFRSDETFL 105
+K + E +++++ S+ N P++ + + + ++ F S++
Sbjct: 200 FDKAMDMEGLNIVSQNTSNRSNDLPYNFTPTYFHMERTAQVIGGLEAVQPSMFGSNDCVT 259
Query: 106 LPTISNMINVEHQEFEEMRHLNERRCRGDSSGCKNMSLESENATSVLNNSVINNTSFNAL 165
+++ +H+ ++ +++ ++ G + N N V N+ +AL
Sbjct: 260 SGFSVGVVDTKHKNQVDISDMSKVIYDEETGGYRYSRELDPNFQHYSRNHVRNSGGTSAL 319
Query: 166 IHSSEKVSADSACFPSVFLDTVVCESDKLLRVDAGHNEMLSFTALSDVNSQKHTKKSECQ 225
S+++ A S+ +P LD+ V + K + + NE+ + SE Q
Sbjct: 320 AMESDRLKAGSS-YPQ--LDSTVLTALKTDKDYSRRNEVF--------------QPSESQ 362
Query: 226 TEPCDKDTSYFQPEPCCKDTSYMMSKFPA------GCELHEALGPAFLKGSKCFDWLAQV 279
KDT + Q E K S + A G EL EALGPAF K S + LA+
Sbjct: 363 GSIFVKDTEHRQEE---KSESSQLDALTASLCSFSGSELLEALGPAFSKTSTDYGELAKF 419
Query: 280 NQDMKTVDMPDEISTSQLTSESRPEHLLEAMVANISHSNNDNNGELSFCTSMQSAMTSGK 339
+ + +++S S LT ES E+LL+A+VA++S+ + + E+S S QS +T+ +
Sbjct: 420 -ESAAAIRRTNDMSHSHLTFESSSENLLDAVVASMSNGDGNVRREISSSRSTQSLLTTAE 478
Query: 340 NPEAS--LHNVHSVNSKAYS-IDHP----SLLREDKHHSLSSSTCPG-------SYSEQF 385
+A HN ++ S S I P L++++ + + + G S S+QF
Sbjct: 479 MAQAEPFGHNKQNIVSTVDSVISQPPLADGLIQQNPSNICGAFSSIGFSSTCLSSSSDQF 538
Query: 386 ERSSEPSKNSKNKARPRE 403
S E K +K +A+P E
Sbjct: 539 PTSLEIPKKNKKRAKPGE 556
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 192/438 (43%), Gaps = 68/438 (15%)
Query: 4 VTHIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDT------- 56
VTHIR+ FL+ D H + M + S S +P++ + CLH+
Sbjct: 149 VTHIRHLFLALTDPLADHASNLMQCDINSPSDRPKIPSK---------CLHEASPDFSGE 199
Query: 57 -EKTTNSEKVDVLTPLQSSERNYAPHS----------AYEKLTDMATLEGPEFRSDETFL 105
+K + E +++++ S+ N P++ + + + ++ F S++
Sbjct: 200 FDKAMDMEGLNIVSQNTSNRSNDLPYNFTPTYFHMERTAQVIGGLEAVQPSMFGSNDCVT 259
Query: 106 LPTISNMINVEHQEFEEMRHLNERRCRGDSSGCKNMSLESENATSVLNNSVINNTSFNAL 165
+++ +H+ ++ +++ ++ G + N N V N+ +AL
Sbjct: 260 SGFSVGVVDTKHKNQVDISDMSKVIYDEETGGYRYSRELDPNFQHYSRNHVRNSGGTSAL 319
Query: 166 IHSSEKVSADSACFPSVFLDTVVCESDKLLRVDAGHNEMLSFTALSDVNSQKHTKKSECQ 225
S+++ A S+ +P LD+ V + K + + NE+ + SE Q
Sbjct: 320 AMESDRLKAGSS-YPQ--LDSTVLTALKTDKDYSRRNEVF--------------QPSESQ 362
Query: 226 TEPCDKDTSYFQPEPCCKDTSYMMSKFPA------GCELHEALGPAFLKGSKCFDWLAQV 279
KDT + Q E K S + A G EL EALGPAF K S + LA+
Sbjct: 363 GSIFVKDTEHRQEE---KSESSQLDALTASLCSFSGSELLEALGPAFSKTSTDYGELAKF 419
Query: 280 NQDMKTVDMPDEISTSQLTSESRPEHLLEAMVANISHSNNDNNGELSFCTSMQSAMTSGK 339
+ + +++S S LT ES E+LL+A+VA++S+ + + E+S S QS +T+ +
Sbjct: 420 -ESAAAIRRTNDMSHSHLTFESSSENLLDAVVASMSNGDGNVRREISSSRSTQSLLTTAE 478
Query: 340 NPEAS--LHNVHSVNSKAYS-IDHP----SLLREDKHHSLSSSTCPG-------SYSEQF 385
+A HN ++ S S I P L++++ + + + G S S+QF
Sbjct: 479 MAQAEPFGHNKQNIVSTVDSVISQPPLADGLIQQNPSNICGAFSSIGFSSTCLSSSSDQF 538
Query: 386 ERSSEPSKNSKNKARPRE 403
S E K +K +A+P E
Sbjct: 539 PTSLEIPKKNKKRAKPGE 556