Miyakogusa Predicted Gene
- Lj1g3v4479110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4479110.1 Non Chatacterized Hit- tr|B9RTE5|B9RTE5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,69.77,3e-17,UNCHARACTERIZED,NULL; seg,NULL,CUFF.32440.1
(175 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30630.1 | Symbols: | P-loop containing nucleoside triphosph... 260 4e-70
AT2G30630.2 | Symbols: | P-loop containing nucleoside triphosph... 249 9e-67
AT1G06750.1 | Symbols: | P-loop containing nucleoside triphosph... 246 6e-66
AT1G06750.2 | Symbols: | P-loop containing nucleoside triphosph... 246 6e-66
AT1G04280.1 | Symbols: | P-loop containing nucleoside triphosph... 160 4e-40
>AT2G30630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:13046883-13049106
REVERSE LENGTH=531
Length = 531
Score = 260 bits (664), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 134/173 (77%)
Query: 1 MGFNDRRMCPHLCRLASEYIRKCEGCEDDIYAFFEREPDADSLYVKLVEEFERCILSYFG 60
MGF DRR CPHLC+LA+EYIRK CE+DIY+FF EP ADSL++KLVEEFERCILSYF
Sbjct: 83 MGFKDRRECPHLCKLANEYIRKSGSCEEDIYSFFSEEPGADSLFIKLVEEFERCILSYFA 142
Query: 61 FHWNHGDIMISQVXXXXXXXXXXXXHIVMAATREQRFERVAKNLKVASVFNTLVEEMKAM 120
+HW+H D+MISQ+ HIVMAATREQRFERV KNLKVA VFNTLVEEMKAM
Sbjct: 143 YHWSHADLMISQILSADVEPKKKLKHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAM 202
Query: 121 GVAVNDDSQCTEVMAPVAHSDRSPVXXXXXXXXXXXKSTVLKDILNEPFWAGA 173
G+A DDS+CTEVMAPVAH DRSPV KSTVLKDIL EPFWAGA
Sbjct: 203 GIASVDDSECTEVMAPVAHKDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGA 255
>AT2G30630.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:13046883-13049106
REVERSE LENGTH=552
Length = 552
Score = 249 bits (635), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 134/194 (69%), Gaps = 21/194 (10%)
Query: 1 MGFNDRRMCPHLCRLASEYIRKCEGCEDDIYAFFEREPDADSLYVKLVEEFERCILSYFG 60
MGF DRR CPHLC+LA+EYIRK CE+DIY+FF EP ADSL++KLVEEFERCILSYF
Sbjct: 83 MGFKDRRECPHLCKLANEYIRKSGSCEEDIYSFFSEEPGADSLFIKLVEEFERCILSYFA 142
Query: 61 FHWNHGDIMISQVXXXXXXX---------------------XXXXXHIVMAATREQRFER 99
+HW+H D+MISQV HIVMAATREQRFER
Sbjct: 143 YHWSHADLMISQVTNKLSLSLLCYITNRPKTFQILSADVEPKKKLKHIVMAATREQRFER 202
Query: 100 VAKNLKVASVFNTLVEEMKAMGVAVNDDSQCTEVMAPVAHSDRSPVXXXXXXXXXXXKST 159
V KNLKVA VFNTLVEEMKAMG+A DDS+CTEVMAPVAH DRSPV KST
Sbjct: 203 VTKNLKVARVFNTLVEEMKAMGIASVDDSECTEVMAPVAHKDRSPVLLLMGGGMGAGKST 262
Query: 160 VLKDILNEPFWAGA 173
VLKDIL EPFWAGA
Sbjct: 263 VLKDILKEPFWAGA 276
>AT1G06750.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:2073882-2076350
FORWARD LENGTH=519
Length = 519
Score = 246 bits (628), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 131/173 (75%)
Query: 1 MGFNDRRMCPHLCRLASEYIRKCEGCEDDIYAFFEREPDADSLYVKLVEEFERCILSYFG 60
MGF DRR CP+LC+LA+EYI K E CE+DIY+FF EPDAD+L++KLVEEFERCILSYF
Sbjct: 69 MGFKDRRECPNLCKLAAEYISKSECCEEDIYSFFSEEPDADTLFIKLVEEFERCILSYFA 128
Query: 61 FHWNHGDIMISQVXXXXXXXXXXXXHIVMAATREQRFERVAKNLKVASVFNTLVEEMKAM 120
FHW+H D+MI+QV IVMAATRE R +RV KNLKVA VFNTLVEEM+AM
Sbjct: 129 FHWSHADLMITQVLSADAEPKRKLKQIVMAATRELRIKRVTKNLKVARVFNTLVEEMRAM 188
Query: 121 GVAVNDDSQCTEVMAPVAHSDRSPVXXXXXXXXXXXKSTVLKDILNEPFWAGA 173
G+A DDSQCTEVMAPVAH DRSPV KSTVLKDIL E FWAGA
Sbjct: 189 GLASVDDSQCTEVMAPVAHKDRSPVLLLMGGGMGAGKSTVLKDILKEAFWAGA 241
>AT1G06750.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:2073882-2076350
FORWARD LENGTH=526
Length = 526
Score = 246 bits (628), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 131/173 (75%)
Query: 1 MGFNDRRMCPHLCRLASEYIRKCEGCEDDIYAFFEREPDADSLYVKLVEEFERCILSYFG 60
MGF DRR CP+LC+LA+EYI K E CE+DIY+FF EPDAD+L++KLVEEFERCILSYF
Sbjct: 76 MGFKDRRECPNLCKLAAEYISKSECCEEDIYSFFSEEPDADTLFIKLVEEFERCILSYFA 135
Query: 61 FHWNHGDIMISQVXXXXXXXXXXXXHIVMAATREQRFERVAKNLKVASVFNTLVEEMKAM 120
FHW+H D+MI+QV IVMAATRE R +RV KNLKVA VFNTLVEEM+AM
Sbjct: 136 FHWSHADLMITQVLSADAEPKRKLKQIVMAATRELRIKRVTKNLKVARVFNTLVEEMRAM 195
Query: 121 GVAVNDDSQCTEVMAPVAHSDRSPVXXXXXXXXXXXKSTVLKDILNEPFWAGA 173
G+A DDSQCTEVMAPVAH DRSPV KSTVLKDIL E FWAGA
Sbjct: 196 GLASVDDSQCTEVMAPVAHKDRSPVLLLMGGGMGAGKSTVLKDILKEAFWAGA 248
>AT1G04280.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:1143643-1146541
REVERSE LENGTH=534
Length = 534
Score = 160 bits (405), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 109/174 (62%), Gaps = 2/174 (1%)
Query: 1 MGFNDRRMCPHLCRLASEYIRKCEGCEDDIYAFFEREPDADSLYVKLVEEFERCILSYFG 60
+GF D P LC+LA+ Y+ K +G ++++ + E E + DSLYV L+EEF+RCIL+YF
Sbjct: 88 LGFEDPNEYPQLCKLANGYLLKTKGYDENVDEYLENEAERDSLYVHLLEEFDRCILTYFS 147
Query: 61 FHWNHGDIMISQ-VXXXXXXXXXXXXHIVMAATREQRFERVAKNLKVASVFNTLVEEMKA 119
F+W +ISQ + VMAATR+QRFERV K+LKV V +TLVEEM+
Sbjct: 148 FNWTQSSNLISQALSDESDQKVPKLKDFVMAATRKQRFERVTKDLKVKRVISTLVEEMRV 207
Query: 120 MGVAVNDDSQCTEVMAPVAHSDRSPVXXXXXXXXXXXKSTVLKDILNEPFWAGA 173
+G + + CTEVM+PVAH+ RSPV KSTVLKDI E FW+ A
Sbjct: 208 IGSG-SSEPHCTEVMSPVAHNKRSPVLLLMGGGMGAGKSTVLKDIFLESFWSEA 260