Miyakogusa Predicted Gene

Lj1g3v4469100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4469100.1 Non Chatacterized Hit- tr|I1N9N5|I1N9N5_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,82,2e-17,UNCHARACTERIZED,NULL,CUFF.32438.1
         (94 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G30630.1 | Symbols:  | P-loop containing nucleoside triphosph...    91   1e-19
AT2G30630.2 | Symbols:  | P-loop containing nucleoside triphosph...    90   3e-19
AT1G06750.2 | Symbols:  | P-loop containing nucleoside triphosph...    88   9e-19
AT1G06750.1 | Symbols:  | P-loop containing nucleoside triphosph...    88   1e-18
AT1G04280.1 | Symbols:  | P-loop containing nucleoside triphosph...    81   2e-16

>AT2G30630.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:13046883-13049106
           REVERSE LENGTH=531
          Length = 531

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/50 (80%), Positives = 45/50 (90%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM RR VRV++QL+SHKRFA AF+TYCNLVDNARLYCTNALEG  K+
Sbjct: 397 RRAIMCRRAVRVRSQLRSHKRFANAFLTYCNLVDNARLYCTNALEGSPKL 446


>AT2G30630.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:13046883-13049106
           REVERSE LENGTH=552
          Length = 552

 Score = 89.7 bits (221), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 45/50 (90%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM RR VRV++QL+SHKRFA AF+TYCNLVDNARLYCTNALEG  K+
Sbjct: 418 RRAIMCRRAVRVRSQLRSHKRFANAFLTYCNLVDNARLYCTNALEGSPKL 467


>AT1G06750.2 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:2073882-2076350
           FORWARD LENGTH=526
          Length = 526

 Score = 88.2 bits (217), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/50 (78%), Positives = 45/50 (90%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM RR VRV++QL+SHKRFA+AF TYC+LVDNARLYCTNALEG  K+
Sbjct: 390 RRAIMCRRAVRVRSQLRSHKRFAEAFPTYCSLVDNARLYCTNALEGSPKL 439


>AT1G06750.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:2073882-2076350
           FORWARD LENGTH=519
          Length = 519

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/50 (78%), Positives = 45/50 (90%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRAIM RR VRV++QL+SHKRFA+AF TYC+LVDNARLYCTNALEG  K+
Sbjct: 383 RRAIMCRRAVRVRSQLRSHKRFAEAFPTYCSLVDNARLYCTNALEGSPKL 432


>AT1G04280.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:1143643-1146541
           REVERSE LENGTH=534
          Length = 534

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 40/50 (80%)

Query: 19  RRAIMSRRGVRVKTQLKSHKRFAQAFMTYCNLVDNARLYCTNALEGPAKV 68
           RRA+M +R VRVK QL SHKRFA AF  YC LVDNARLYCTNA+ GP ++
Sbjct: 405 RRALMVKRAVRVKPQLNSHKRFANAFPKYCELVDNARLYCTNAVGGPPRL 454