Miyakogusa Predicted Gene

Lj1g3v4454670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4454670.1 Non Chatacterized Hit- tr|I1PGB5|I1PGB5_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,44.76,6e-18,ZF_RING_2,Zinc finger, RING-type; seg,NULL;
RING/U-box,NULL; RING FINGER PROTEIN,NULL; no descriptio,CUFF.32543.1
         (428 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch...   416   e-116
AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 | ch...   415   e-116
AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 | ch...   249   2e-66
AT3G23060.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   101   1e-21
AT5G13250.1 | Symbols:  | RING finger protein | chr5:4234486-424...    90   3e-18
AT1G28080.1 | Symbols:  | RING finger protein | chr1:9789826-979...    63   4e-10

>AT1G06770.1 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
           chr1:2079222-2081707 REVERSE LENGTH=421
          Length = 421

 Score =  416 bits (1070), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/426 (53%), Positives = 298/426 (69%), Gaps = 16/426 (3%)

Query: 5   VVKVRWNTIAACMTCPLCNKLFKEATTISECLHTFCRKCIYDKLSDEELECCPICNIDLG 64
           ++KV+  T+ AC++C +C+ + ++ATTISECLHTFCRKCIY+K++++E+E CP+CNIDLG
Sbjct: 2   MIKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLG 61

Query: 65  CVPLEKLRPDHNLQDMRAKIFPLKGRKAKAPEVAPSVPLPARRKERSLSSLVVITPRVSA 124
             PLEKLRPDHNLQD+RAKIF LK RK KAP +   V LP +RKERS+SSLVV TP VSA
Sbjct: 62  STPLEKLRPDHNLQDLRAKIFALKRRKVKAPGI---VSLPGKRKERSISSLVVSTPMVSA 118

Query: 125 QATMTGRRTK-PTRKASGLRSSSFSIEKPIKKEEVSGDH-PESSSSRDTSNKLPQNTEQS 182
           QA  T RRTK PTRK   LR+ S + E+ +KKEE SGD   ES+SS DT NK  QN  QS
Sbjct: 119 QAGTTRRRTKAPTRKE--LRNGSLA-ERTVKKEESSGDELLESTSSPDTLNKFTQNKRQS 175

Query: 183 SSPCGGSQSKPNKESENSAEPWDAKLDLWKPLNFLVEVASRSKSFKSNA-QGSDAKLEPI 241
              C   +S  NKE+++  EPWD+K+D WKPLNFLVEVA+ +K  KS+A QGS +K E  
Sbjct: 176 KKSC--KESISNKENKDGDEPWDSKMD-WKPLNFLVEVANGTKPLKSSASQGSGSKSEHA 232

Query: 242 PVNESDSQVQXXXXXXXXXXXXXXXXRISPHL-VSSDTSKPNKLRRI-RKKKEPALGESG 299
            V+ +  Q                  + +     +S+T  P ++R   RK+    LG+S 
Sbjct: 233 NVSRNQFQGSKTKTKNKKRKCKREDDKSNNGDPTTSETVTPKRMRTTQRKRSATTLGDSR 292

Query: 300 ISPQAVLHSSSNKLLRDGPIWFSLVASENQEGDAPLPQIPSSYVRIKDGSLPVSFIQKYL 359
             PQ    SS+ +  R+GP+WFSLVAS +QEG   LPQIP++++RI+DG+  VSFIQKYL
Sbjct: 293 NLPQPD-ESSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYL 351

Query: 360 MKKLDLSSESEVENKCMGQPVIPTLRLHNLVELWLDSAASSSLRIPATIGSSAKDFVMVL 419
           M+KLDL SE+E+E KCMG+ VIPTL L+NLV+LWL   +S+  R  A +GSSAKDF MVL
Sbjct: 352 MRKLDLESENEIEIKCMGEAVIPTLTLYNLVDLWL-QKSSNHQRFAALVGSSAKDFTMVL 410

Query: 420 AYARKV 425
            YARK+
Sbjct: 411 VYARKL 416


>AT2G30580.1 | Symbols: DRIP2 | DREB2A-interacting protein 2 |
           chr2:13026444-13030363 FORWARD LENGTH=420
          Length = 420

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/424 (53%), Positives = 295/424 (69%), Gaps = 17/424 (4%)

Query: 5   VVKVRWNTIAACMTCPLCNKLFKEATTISECLHTFCRKCIYDKLSDEELECCPICNIDLG 64
           V KV+  T+ ACMTCPLC+KL ++ATTISECLHTFCRKCIY+K++++E+E CP+C+IDLG
Sbjct: 6   VAKVKRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLG 65

Query: 65  CVPLEKLRPDHNLQDMRAKIFPLKGRKAKAPEVAPSVPLPARRKERSLSSLVVITPRVSA 124
             PLEKLRPDH LQD+RAK+FPLK +K +APEV  S+ LPA+RKERS+SSLVV TPRVSA
Sbjct: 66  GTPLEKLRPDHILQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTPRVSA 125

Query: 125 QATMTGRRTKPTRKASGLRSSSFSIEKPIKKEEVSGDHPESSSSRDTSNKLPQNTEQSSS 184
           QA  TG+RTK   +     S SF+     K+EE   DH ES+SS +T  K  QN  QSS 
Sbjct: 126 QAGTTGKRTKAATRKDVRGSGSFTKRTVKKEEEFGDDHVESASSPETLKKFTQNKRQSSY 185

Query: 185 PCGGSQSKPNKESENSAEPWDAKLDLWKPLNFLVEVASRSKSFKS---NAQGSDAKLEPI 241
               +QS  N+ +++  EPWD+KL LWKPLNFLV+VA+ +K  KS   NA  +D +    
Sbjct: 186 -ANPNQSLSNRRNKDVDEPWDSKLHLWKPLNFLVDVANGTKDPKSELGNASHNDVQ---- 240

Query: 242 PVNESDSQVQXXXXXXXXXXXXXXXXRISPHLVSSDTSKPNKLRRIRKKKEPALGESGIS 301
                 S+ +                   P   +S+T+   + RR R+K+    G+S I 
Sbjct: 241 -----GSKTKTKDHKRKCKLEEEISNNGDP--TTSETATLKRTRRTRRKRSSTFGDSRI- 292

Query: 302 PQAVLHSSSNKLLRDGPIWFSLVASENQEGDAPLPQIPSSYVRIKDGSLPVSFIQKYLMK 361
           P     +S  +  R+G +WFSLVAS NQEG+A LPQIP++Y+RI+DG++PVSFIQKYLM+
Sbjct: 293 PLLPGAASLKQERRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMR 352

Query: 362 KLDLSSESEVENKCMGQPVIPTLRLHNLVELWLDSAASSSLRIPATIGSSAKDFVMVLAY 421
           KLDL SE EVE  CMG+PVIPTL+LH+LV+LWL++  S   R+ A+IGSSAK+FVMVL Y
Sbjct: 353 KLDLKSEDEVEITCMGEPVIPTLQLHSLVDLWLET-TSKHQRVAASIGSSAKEFVMVLVY 411

Query: 422 ARKV 425
           +RK+
Sbjct: 412 SRKL 415


>AT1G06770.2 | Symbols: DRIP1 | DREB2A-interacting protein 1 |
           chr1:2079222-2080658 REVERSE LENGTH=307
          Length = 307

 Score =  249 bits (636), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/309 (50%), Positives = 201/309 (65%), Gaps = 13/309 (4%)

Query: 122 VSAQATMTGRRTK-PTRKASGLRSSSFSIEKPIKKEEVSGDHP-ESSSSRDTSNKLPQNT 179
           VSAQA  T RRTK PTRK   LR+ S + E+ +KKEE SGD   ES+SS DT NK  QN 
Sbjct: 2   VSAQAGTTRRRTKAPTRKE--LRNGSLA-ERTVKKEESSGDELLESTSSPDTLNKFTQNK 58

Query: 180 EQSSSPCGGSQSKPNKESENSAEPWDAKLDLWKPLNFLVEVASRSKSFKSNA-QGSDAKL 238
            QS   C   +S  NKE+++  EPWD+K+D WKPLNFLVEVA+ +K  KS+A QGS +K 
Sbjct: 59  RQSKKSC--KESISNKENKDGDEPWDSKMD-WKPLNFLVEVANGTKPLKSSASQGSGSKS 115

Query: 239 EPIPVNESDSQVQXXXXXXXXXXXXXXXXRISPHL-VSSDTSKPNKLRRI-RKKKEPALG 296
           E   V+ +  Q                  + +     +S+T  P ++R   RK+    LG
Sbjct: 116 EHANVSRNQFQGSKTKTKNKKRKCKREDDKSNNGDPTTSETVTPKRMRTTQRKRSATTLG 175

Query: 297 ESGISPQAVLHSSSNKLLRDGPIWFSLVASENQEGDAPLPQIPSSYVRIKDGSLPVSFIQ 356
           +S   PQ    SS+ +  R+GP+WFSLVAS +QEG   LPQIP++++RI+DG+  VSFIQ
Sbjct: 176 DSRNLPQPD-ESSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQ 234

Query: 357 KYLMKKLDLSSESEVENKCMGQPVIPTLRLHNLVELWLDSAASSSLRIPATIGSSAKDFV 416
           KYLM+KLDL SE+E+E KCMG+ VIPTL L+NLV+LWL   +S+  R  A +GSSAKDF 
Sbjct: 235 KYLMRKLDLESENEIEIKCMGEAVIPTLTLYNLVDLWL-QKSSNHQRFAALVGSSAKDFT 293

Query: 417 MVLAYARKV 425
           MVL YARK+
Sbjct: 294 MVLVYARKL 302


>AT3G23060.1 | Symbols:  | RING/U-box superfamily protein |
          chr3:8200868-8203116 FORWARD LENGTH=480
          Length = 480

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 56/81 (69%)

Query: 5  VVKVRWNTIAACMTCPLCNKLFKEATTISECLHTFCRKCIYDKLSDEELECCPICNIDLG 64
          + KV    +  C+ CP+C   FK+ATTISECLHTFCR CI +K  +E +  CP+CN++LG
Sbjct: 2  LTKVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLG 61

Query: 65 CVPLEKLRPDHNLQDMRAKIF 85
            PLEKLR D   QD++ KI+
Sbjct: 62 VFPLEKLRSDCTWQDLKLKIY 82



 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 7/141 (4%)

Query: 288 RKKKEPALGESGISPQAVLHSSSNKLLRDG----PIWFSLVASENQEGDAPLPQIPSSYV 343
           R+   PA G +  +P+A +       + +G    P+WFSL  S+ Q  +  LP I +  +
Sbjct: 332 RRTVNPAAGTT--TPEAPVSVEEEMKVEEGRNNNPVWFSLKPSKTQNIEMLLPPITACCI 389

Query: 344 RIKDGSLPVSFIQKYLMKKLDLSSESEVENKCMGQPVIPTLRLHNLVELWLDSAASSSLR 403
           R+KD ++ VS+++KYLM KL L SE +VE     +PV  +L LHNLV+ W+ +      R
Sbjct: 390 RVKDSNMTVSYLKKYLMVKLGLESEDQVEIWLRDEPVCSSLTLHNLVDWWVQTTPLPE-R 448

Query: 404 IPATIGSSAKDFVMVLAYARK 424
             A +GSSA +F+M L Y+ K
Sbjct: 449 QSAMVGSSAAEFIMDLYYSFK 469


>AT5G13250.1 | Symbols:  | RING finger protein |
           chr5:4234486-4241615 FORWARD LENGTH=387
          Length = 387

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 4/112 (3%)

Query: 319 IWFSLVASENQEGDAPLPQIPSSYVRIKDGSLPVSFIQKYLMKKLDLSSES-EVENKCMG 377
           IWF L AS+NQ  +  LPQIP SY+RIKDG + V  + KYL+ KL L  ES +VE +C G
Sbjct: 276 IWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVEIRCRG 335

Query: 378 QPVIPTLRLHNLVE-LWLDSAASSSLRIPATI--GSSAKDFVMVLAYARKVS 426
           Q + P L L ++ + +W  S  +SSL    T+   SS  D +MVL Y R +S
Sbjct: 336 QELEPVLTLQHVRDAIWRGSRDTSSLSQNITLLPNSSTSDHLMVLHYGRTIS 387


>AT1G28080.1 | Symbols:  | RING finger protein |
           chr1:9789826-9790918 FORWARD LENGTH=291
          Length = 291

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 39/53 (73%)

Query: 319 IWFSLVASENQEGDAPLPQIPSSYVRIKDGSLPVSFIQKYLMKKLDLSSESEV 371
           +WF L AS+ QE +  LPQ+  SY+RIKDG + V  + KYLMKKL+L SESEV
Sbjct: 237 LWFLLQASQFQEREPFLPQVNKSYLRIKDGRITVRLLIKYLMKKLELDSESEV 289