Miyakogusa Predicted Gene

Lj1g3v4450530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4450530.1 Non Chatacterized Hit- tr|I1N9M4|I1N9M4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56489
PE,93.88,5e-19,SUBFAMILY NOT NAMED,NULL; URIDINE KINASE,NULL; no
description,NULL,CUFF.32408.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03030.1 | Symbols:  | P-loop containing nucleoside triphosph...   248   1e-66

>AT1G03030.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:701621-703568
           FORWARD LENGTH=301
          Length = 301

 Score =  248 bits (633), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 122/156 (78%), Positives = 142/156 (91%)

Query: 1   MDGFHLYRSELGAMENPEEAHARRGAPWTFNPSRLLTCLKNLKIQGSVYVPSFDHGVGDP 60
           MDGFHLYRS+L AME+P+EAHARRGAPWTF+P+ LL CLK LK +GSVYVPSFDHGVGDP
Sbjct: 145 MDGFHLYRSQLDAMEDPKEAHARRGAPWTFDPALLLNCLKKLKNEGSVYVPSFDHGVGDP 204

Query: 61  VEDDIFVNLQHKVVIVEGNYLLLEDGVWKEISSLFDEKWFIDINIDKAMQRVLKRHISTG 120
           VEDDIFV+LQHKVVIVEGNY+LLE+G WK+IS +FDEKWFID+N+D AMQRV  RHISTG
Sbjct: 205 VEDDIFVSLQHKVVIVEGNYILLEEGSWKDISDMFDEKWFIDVNLDTAMQRVENRHISTG 264

Query: 121 KPPDIAKQRVENNDRLNAELIMKSKKNADLIIKSVD 156
           KPPD+AK RV+ NDR NAELI+KSK NADL+I+S++
Sbjct: 265 KPPDVAKWRVDYNDRPNAELIIKSKTNADLLIRSMN 300