Miyakogusa Predicted Gene

Lj1g3v4450290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4450290.1 Non Chatacterized Hit- tr|H3HWB0|H3HWB0_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,29.21,0.00000005,Interferon-induced guanylate-binding protein
1 (GBP1), C-terminal domain,Guanylate-binding protein, ,CUFF.32397.1
         (362 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38840.1 | Symbols:  | Guanylate-binding family protein | chr...   587   e-168

>AT2G38840.1 | Symbols:  | Guanylate-binding family protein |
           chr2:16227329-16232115 FORWARD LENGTH=602
          Length = 602

 Score =  587 bits (1512), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 263/362 (72%), Positives = 320/362 (88%)

Query: 1   MGDNSTAFSLPQPHLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKSLNGK 60
           MGDNSTAFSLPQPHL RTKLCD+KD +LD +YV +RD+LK+LVAS+IRPKIVQGK+LNGK
Sbjct: 241 MGDNSTAFSLPQPHLMRTKLCDLKDEDLDSTYVARRDQLKKLVASIIRPKIVQGKTLNGK 300

Query: 61  EFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSERMATVDLPLSEESLQESH 120
           EF+SFLEQIL+ALNKGEIPSTGSLVE+FNK+I+ERC+KLY+E+M  V LP+SEESLQ +H
Sbjct: 301 EFISFLEQILDALNKGEIPSTGSLVEVFNKDIVERCVKLYNEKMVRVRLPMSEESLQSAH 360

Query: 121 DRSRGEAMEMFDQQHFGRHHAKKSIMQLEEEINKVYKNALFQNEYKSSKLCEALYTRCED 180
           + +  EA++ FD QHFGR HAKKS+ QL+E++ +VYKN +  NEY+SSKLCEALYT CED
Sbjct: 361 EMAHNEAIKAFDAQHFGRQHAKKSVDQLDEQMQEVYKNFVLANEYQSSKLCEALYTSCED 420

Query: 181 MMDQLQVLRLPSMSKFNAGLMKCNSSFEHECVGPSKTNYEKRMLKMLEKSKSLFIKEYNH 240
            MD LQ LRLPSM+KFNAG + CN +FE +CVGPSK NYE+R+ KM+ KS+SLFIKEYN+
Sbjct: 421 DMDHLQALRLPSMAKFNAGFVYCNKTFEQQCVGPSKQNYEQRLTKMMGKSRSLFIKEYNN 480

Query: 241 RLFNWLVAFSLVMVVIGRFILKFILIEIGAWVLFIFLETYTRLFWSAESLYYNPVWHFIV 300
           RLFNWLV FSLVMVV+GRFI+KFIL+E+ AW+LFIFLETYTR+FW+AE+LYYNPVWHFIV
Sbjct: 481 RLFNWLVGFSLVMVVVGRFIIKFILLEMAAWILFIFLETYTRMFWTAEALYYNPVWHFIV 540

Query: 301 GTWETLVYSPILDLDRWSIPLGVIVSFFILYWRCCGKRKHGSGWLLPLYNSNKNGPNRPR 360
           GTWE +VYSP+LDLDRW+IP+  I++  +LYWRC GKRKHG+ WLLPLYN+ KNG NR R
Sbjct: 541 GTWENVVYSPVLDLDRWAIPIVCIIALCVLYWRCYGKRKHGARWLLPLYNNQKNGRNRER 600

Query: 361 TD 362
           ++
Sbjct: 601 SE 602