Miyakogusa Predicted Gene
- Lj1g3v4449220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4449220.1 Non Chatacterized Hit- tr|I1JF58|I1JF58_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13613
PE,65.15,0,DUF4033,Domain of unknown function DUF4033,CUFF.32393.1
(264 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03055.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 250 8e-67
AT1G64680.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 163 9e-41
AT1G03055.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 140 1e-33
AT4G01995.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 116 2e-26
>AT1G03055.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins
in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0;
Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink). | chr1:710102-711763 REVERSE
LENGTH=264
Length = 264
Score = 250 bits (638), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 159/214 (74%), Gaps = 2/214 (0%)
Query: 48 AARKTIGESDSPMKTNIYKDNWFDRLAINHLSKSVQEATGVINHK--SGYEGLVEAANVA 105
AA++T S K +D++F ++AIN+LSK++Q+A G+ + + Y+ LV+ A
Sbjct: 48 AAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRV 107
Query: 106 KHKFSPVQQQEVVIQALDKAFPKPILDLIKTLLPPSKFAREYYAVFTTLFFAWLVGPSEV 165
F QQ E V+ +LD+A P I LIK PPSK +RE +A+FTT+ FAWLVGPSEV
Sbjct: 108 SRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEV 167
Query: 166 RESEVNGRREKNVVYVKKCRFLEATNCVGMCTNICKMPSQSFIKDSLGMSFNMVPNFDDM 225
RE+EVNGR+EK+VVY++KCRFLE +NCVGMCT+ICK+PSQ FIK+SLGM M P+F+D+
Sbjct: 168 RETEVNGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDL 227
Query: 226 SCEMIFGQDPPALADDPALKQPCYKLCKAYKQHG 259
SC+M+FG++PP + DDPA+KQPC++ CK+ K +G
Sbjct: 228 SCKMMFGREPPEIEDDPAMKQPCFEFCKSNKSYG 261
>AT1G64680.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins
in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0;
Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes -
15 (source: NCBI BLink). | chr1:24036071-24037062
FORWARD LENGTH=250
Length = 250
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
Query: 95 YEGLVEAANVAKHKFSPVQQQEVVIQALDKAFPKPILDLIKTLLPPSKFAREYYAVFTTL 154
YE VE + S VQQQE V + L P + + L PP+K+A E+ A T
Sbjct: 77 YESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVP 136
Query: 155 FFAWLVGPSEVRESEVNGRREKNVVYVKKCRFLEATNCVGMCTNICKMPSQSFIKDSLGM 214
FF WLVGPS+V E EVNG ++++ V +KKCR+LE + CVGMC N+CK+P+Q F + G+
Sbjct: 137 FFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGL 196
Query: 215 SFNMVPNFDDMSCEMIFGQDPPALADDPALKQPCYK-LCKAYKQHGPSC 262
M PN++DMSCEMI+GQ PPA +D A KQPC +C P C
Sbjct: 197 PLTMNPNYEDMSCEMIYGQAPPAFEEDVATKQPCLADICSMSNPSSPIC 245
>AT1G03055.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G64680.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr1:710912-711763 REVERSE LENGTH=200
Length = 200
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 96/141 (68%), Gaps = 2/141 (1%)
Query: 48 AARKTIGESDSPMKTNIYKDNWFDRLAINHLSKSVQEATGVINHK--SGYEGLVEAANVA 105
AA++T S K +D++F ++AIN+LSK++Q+A G+ + + Y+ LV+ A
Sbjct: 48 AAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRV 107
Query: 106 KHKFSPVQQQEVVIQALDKAFPKPILDLIKTLLPPSKFAREYYAVFTTLFFAWLVGPSEV 165
F QQ E V+ +LD+A P I LIK PPSK +RE +A+FTT+ FAWLVGPSEV
Sbjct: 108 SRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEV 167
Query: 166 RESEVNGRREKNVVYVKKCRF 186
RE+EVNGR+EK+VVY++KCR
Sbjct: 168 RETEVNGRKEKSVVYIEKCRL 188
>AT4G01995.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G64680.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:873075-874619 FORWARD LENGTH=258
Length = 258
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 65 YKDNWFDRLAINHLSKSVQEATGVINHKSGYEGLVEAANVAKHKF-SPVQQQEVVIQALD 123
YK D + + E G + K GY GL+E + K + + + ++ L
Sbjct: 52 YKPGPLDDFFMQSFRNKLVEEVGSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILK 111
Query: 124 KAFPKPILDLIKTLLPP---SKFAREYYAVFTTLFFAWLVGPSEVRESEV-NGRREKNVV 179
FP IL+L K L+ P K A A T L WL+GPS+V ++ NG + V
Sbjct: 112 SLFPPLILELYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGV 171
Query: 180 YVKKCRFLEATNCVGMCTNICKMPSQSFIKDSLGMSFNMVPNFDDMSCEMIFGQDPPALA 239
+V+KC++LE + CVG+C N CK+P+Q+F KD +G+ M PNF D SC+ FG PP
Sbjct: 172 FVEKCQYLEESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAPP--E 229
Query: 240 DDPALKQPCYKLC 252
DD + +PC++ C
Sbjct: 230 DDGNVNEPCFETC 242