Miyakogusa Predicted Gene

Lj1g3v4446870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4446870.1 Non Chatacterized Hit- tr|I1L6M7|I1L6M7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55824
PE,65.45,0,BIFUNCTIONAL PROTEIN FOLD,NULL; TETRAHYDROFOLATE
DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER,NULL; NA,gene.g36494.t1.1
         (301 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00620.1 | Symbols:  | Amino acid dehydrogenase family protei...   375   e-104
AT4G00600.1 | Symbols:  | Amino acid dehydrogenase family protei...   309   2e-84
AT2G38660.3 | Symbols:  | Amino acid dehydrogenase family protei...   289   1e-78
AT2G38660.1 | Symbols:  | Amino acid dehydrogenase family protei...   289   1e-78
AT3G12290.1 | Symbols:  | Amino acid dehydrogenase family protei...   273   1e-73
AT2G38660.4 | Symbols:  | Amino acid dehydrogenase family protei...   249   1e-66
AT2G38660.2 | Symbols:  | Amino acid dehydrogenase family protei...   166   2e-41

>AT4G00620.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr4:259265-260788 REVERSE LENGTH=360
          Length = 360

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 186/295 (63%), Positives = 227/295 (76%), Gaps = 3/295 (1%)

Query: 7   AKVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETV 66
           A VID KAVA +IR +I  E+ RMKE++GV PGLAVILVGDR     Y VR+KK+AC++V
Sbjct: 69  AIVIDGKAVAKKIRDEITIEVSRMKESIGVIPGLAVILVGDRKDSATY-VRNKKKACDSV 127

Query: 67  GINFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVE 126
           GI   EVRL EDS+E E+LK +S  NDDPSVHG + Q+PL  HM ++N+   V I+KDV+
Sbjct: 128 GIKSFEVRLAEDSSEEEVLKSVSGFNDDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVD 187

Query: 127 GFHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAH 186
           GFHP NI RL    G EP FVPCTP GCIELLH YN+ I GKRAVVIGR N  VG+PAA 
Sbjct: 188 GFHPLNIGRLAMR-GREPLFVPCTPKGCIELLHRYNIEIKGKRAVVIGRSN-IVGMPAAL 245

Query: 187 LLQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKD 246
           LLQRE A VS++ S+T NPEE+TR+ADI+IS  G+PN+VR SWIK GAV+ID G +  +D
Sbjct: 246 LLQREDATVSIIHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGAVLIDVGINPVED 305

Query: 247 PNRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRMHNFE 301
           P+   G+R VGD+CYEEA K+ASA+TP+ GGVGPM +AMLL NTL SAKR+HNF+
Sbjct: 306 PSAARGYRLVGDICYEEASKVASAITPVPGGVGPMTIAMLLSNTLTSAKRIHNFQ 360


>AT4G00600.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr4:255320-256610 REVERSE LENGTH=310
          Length = 310

 Score =  309 bits (791), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 162/295 (54%), Positives = 196/295 (66%), Gaps = 39/295 (13%)

Query: 7   AKVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETV 66
           A VID KA A +IR DIK E+ RMKE++GV P                            
Sbjct: 55  AIVIDGKAEAKKIRDDIKIEVSRMKESIGVVPA--------------------------- 87

Query: 67  GINFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVE 126
                     EDS+E E+LK++S  NDDPSVHG + Q+PL  HM ++N+   V I+KDV+
Sbjct: 88  ----------EDSSEEEVLKYVSGFNDDPSVHGVLVQLPLPSHMDEQNILNAVSIEKDVD 137

Query: 127 GFHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAH 186
           GFHP NI RL    G EP FVPCTP GCIELLH YN+   GKRAVVIGR N  VG+PAA 
Sbjct: 138 GFHPLNIGRLAMR-GREPLFVPCTPKGCIELLHRYNIEFKGKRAVVIGRSN-IVGMPAAL 195

Query: 187 LLQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKD 246
           LLQ+E A VS++ S+T NPEELTRQADI+IS  G+PN+VR SWIK GAV+ID G    +D
Sbjct: 196 LLQKEDATVSIIHSRTMNPEELTRQADILISAVGKPNMVRGSWIKPGAVLIDVGIKPVED 255

Query: 247 PNRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRMHNFE 301
           P+  GG R VGD+CY EA K+ASA+TP+ G VGPM +AMLL NTL SAKR+HNF+
Sbjct: 256 PSAAGGERLVGDICYVEASKIASAITPVPGDVGPMTIAMLLSNTLTSAKRIHNFQ 310


>AT2G38660.3 | Symbols:  | Amino acid dehydrogenase family protein |
           chr2:16166392-16168194 FORWARD LENGTH=352
          Length = 352

 Score =  289 bits (740), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 151/289 (52%), Positives = 200/289 (69%), Gaps = 3/289 (1%)

Query: 9   VIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETVGI 68
           VID   +A +IR  I +E+ +MK+AVG  PGLAV+LVG++   + Y VR+K +ACE  GI
Sbjct: 65  VIDGNVIAEEIRTKIISEVGKMKKAVGKVPGLAVVLVGEQRDSQTY-VRNKIKACEETGI 123

Query: 69  NFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVEGF 128
             +   LPED TE +I+  +   N+D S+HG + Q+PL +H+ +  +   VR++KDV+GF
Sbjct: 124 KSVLAELPEDCTEGQIISVLRKFNEDTSIHGILVQLPLPQHLNESKILNMVRLEKDVDGF 183

Query: 129 HPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAHLL 188
           HP N+  L    G EP FV CTP GC+ELL    V I+GK AVVIGR N  VGLP + LL
Sbjct: 184 HPLNVGNLAMR-GREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSN-IVGLPMSLLL 241

Query: 189 QREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKDPN 248
           QR  A VS V + T +PE +TR+ADIVI+ AG PNLVR SW+K GAV+ID G +  +D +
Sbjct: 242 QRHDATVSTVHAFTKDPEHITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSS 301

Query: 249 RPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRM 297
              G+R VGDVCYEEA+ +ASA+TP+ GGVGPM + MLL NTL +AKR+
Sbjct: 302 CEFGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLEAAKRI 350


>AT2G38660.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr2:16166392-16168194 FORWARD LENGTH=352
          Length = 352

 Score =  289 bits (740), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 151/289 (52%), Positives = 200/289 (69%), Gaps = 3/289 (1%)

Query: 9   VIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETVGI 68
           VID   +A +IR  I +E+ +MK+AVG  PGLAV+LVG++   + Y VR+K +ACE  GI
Sbjct: 65  VIDGNVIAEEIRTKIISEVGKMKKAVGKVPGLAVVLVGEQRDSQTY-VRNKIKACEETGI 123

Query: 69  NFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVEGF 128
             +   LPED TE +I+  +   N+D S+HG + Q+PL +H+ +  +   VR++KDV+GF
Sbjct: 124 KSVLAELPEDCTEGQIISVLRKFNEDTSIHGILVQLPLPQHLNESKILNMVRLEKDVDGF 183

Query: 129 HPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAHLL 188
           HP N+  L    G EP FV CTP GC+ELL    V I+GK AVVIGR N  VGLP + LL
Sbjct: 184 HPLNVGNLAMR-GREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSN-IVGLPMSLLL 241

Query: 189 QREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKDPN 248
           QR  A VS V + T +PE +TR+ADIVI+ AG PNLVR SW+K GAV+ID G +  +D +
Sbjct: 242 QRHDATVSTVHAFTKDPEHITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSS 301

Query: 249 RPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRM 297
              G+R VGDVCYEEA+ +ASA+TP+ GGVGPM + MLL NTL +AKR+
Sbjct: 302 CEFGYRLVGDVCYEEALGVASAITPVPGGVGPMTITMLLCNTLEAAKRI 350


>AT3G12290.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr3:3919591-3921326 FORWARD LENGTH=299
          Length = 299

 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 137/291 (47%), Positives = 195/291 (67%), Gaps = 3/291 (1%)

Query: 7   AKVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETV 66
           AK+ID KA+A  IR +I  E+  + E  G  PGLAV++VG R   + Y V  K++AC  V
Sbjct: 9   AKIIDGKAIAHTIRSEIAEEVRGLSEKHGKVPGLAVVIVGSRKDSQTY-VNTKRKACAEV 67

Query: 67  GINFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVE 126
           GI   +V LPE+ +E +++  +  LN +P VHG + Q+PL +H+ +E++   + IDKDV+
Sbjct: 68  GIKSFDVGLPEEVSEADLISKVHELNSNPDVHGILVQLPLPKHINEEHILGAISIDKDVD 127

Query: 127 GFHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAH 186
           GFHP NI +L    G EP F+PCTP GC+ELL    V I G+RAVV+GR N  VGLP + 
Sbjct: 128 GFHPLNIGKLAMK-GREPLFLPCTPKGCLELLARSGVKIKGQRAVVVGRSN-IVGLPVSL 185

Query: 187 LLQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKD 246
           LL +  A V+ V S T +PE + R+ADIVI+  G+ ++++ +WIK GA +ID G +   D
Sbjct: 186 LLLKADATVTTVHSHTKDPEAIIREADIVIAACGQAHMIKGNWIKPGAAVIDVGTNAVSD 245

Query: 247 PNRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRM 297
           P++  G+R VGDV + EA K+A  +TP+ GGVGPM +AMLL+NT+  AKR+
Sbjct: 246 PSKKSGYRLVGDVDFAEASKVAGFITPVPGGVGPMTVAMLLRNTVDGAKRV 296


>AT2G38660.4 | Symbols:  | Amino acid dehydrogenase family protein |
           chr2:16166392-16168282 FORWARD LENGTH=332
          Length = 332

 Score =  249 bits (637), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 131/257 (50%), Positives = 174/257 (67%), Gaps = 3/257 (1%)

Query: 9   VIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETVGI 68
           VID   +A +IR  I +E+ +MK+AVG  PGLAV+LVG++   + Y VR+K +ACE  GI
Sbjct: 65  VIDGNVIAEEIRTKIISEVGKMKKAVGKVPGLAVVLVGEQRDSQTY-VRNKIKACEETGI 123

Query: 69  NFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVEGF 128
             +   LPED TE +I+  +   N+D S+HG + Q+PL +H+ +  +   VR++KDV+GF
Sbjct: 124 KSVLAELPEDCTEGQIISVLRKFNEDTSIHGILVQLPLPQHLNESKILNMVRLEKDVDGF 183

Query: 129 HPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAHLL 188
           HP N+  L    G EP FV CTP GC+ELL    V I+GK AVVIGR N  VGLP + LL
Sbjct: 184 HPLNVGNLAMR-GREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSN-IVGLPMSLLL 241

Query: 189 QREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKDPN 248
           QR  A VS V + T +PE +TR+ADIVI+ AG PNLVR SW+K GAV+ID G +  +D +
Sbjct: 242 QRHDATVSTVHAFTKDPEHITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSS 301

Query: 249 RPGGFRWVGDVCYEEAI 265
              G+R VGDVCYEEA+
Sbjct: 302 CEFGYRLVGDVCYEEAL 318


>AT2G38660.2 | Symbols:  | Amino acid dehydrogenase family protein |
           chr2:16166392-16167676 FORWARD LENGTH=243
          Length = 243

 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 119/181 (65%), Gaps = 3/181 (1%)

Query: 9   VIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETVGI 68
           VID   +A +IR  I +E+ +MK+AVG  PGLAV+LVG++   + Y VR+K +ACE  GI
Sbjct: 65  VIDGNVIAEEIRTKIISEVGKMKKAVGKVPGLAVVLVGEQRDSQTY-VRNKIKACEETGI 123

Query: 69  NFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVEGF 128
             +   LPED TE +I+  +   N+D S+HG + Q+PL +H+ +  +   VR++KDV+GF
Sbjct: 124 KSVLAELPEDCTEGQIISVLRKFNEDTSIHGILVQLPLPQHLNESKILNMVRLEKDVDGF 183

Query: 129 HPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAHLL 188
           HP N+  L    G EP FV CTP GC+ELL    V I+GK AVVIGR N  VGLP + LL
Sbjct: 184 HPLNVGNLAMR-GREPLFVSCTPKGCVELLIRTGVEIAGKNAVVIGRSN-IVGLPMSLLL 241

Query: 189 Q 189
           Q
Sbjct: 242 Q 242