Miyakogusa Predicted Gene

Lj1g3v4446640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4446640.1 Non Chatacterized Hit- tr|B9SFJ4|B9SFJ4_RICCO
Putative uncharacterized protein OS=Ricinus communis G,44.19,2e-18,
,NODE_25210_length_1006_cov_266.711731.path1.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22550.1 | Symbols:  | Protein of unknown function (DUF581) |...    62   2e-10
AT3G63210.1 | Symbols: MARD1 | Protein of unknown function (DUF5...    54   4e-08

>AT3G22550.1 | Symbols:  | Protein of unknown function (DUF581) |
           chr3:7991827-7992805 REVERSE LENGTH=267
          Length = 267

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 81/169 (47%), Gaps = 37/169 (21%)

Query: 2   LLRNRSRAVTKPPLMADHSSNPSPNQNCAKT--IPSLFGS-PKFRDFTNKCLSAGTDALR 58
           +L+ RSR+  K  LMA+  +N S NQ  +KT   P LF +   F+ FT        DA+ 
Sbjct: 1   MLKKRSRS--KQALMAE--TNQSQNQKQSKTTPFPRLFTAFSSFKSFTE------NDAVA 50

Query: 59  SPTSILDTRSFIPSFGFGNPFSHDKSTQTFPLKTSETRSSMVSKGIGLALVGDFKDELV- 117
           SPTSILDT+ F       NPF  D      P    ETR  +  K IGLA+V    D L+ 
Sbjct: 51  SPTSILDTKPFS---VLKNPFGSDNPKTQEP----ETRLKLEPKRIGLAIV----DSLIQ 99

Query: 118 DEKNSAEPIKGSVFLGKQLRVKIPPLEYPSSFSPSKSQTHGGHDFGTKT 166
           DE     P  G++  G QLR+++P     SS            DFG KT
Sbjct: 100 DETPEPGPRSGTILFGSQLRIRVPDSPISSS------------DFGIKT 136


>AT3G63210.1 | Symbols: MARD1 | Protein of unknown function (DUF581)
           | chr3:23354019-23354906 REVERSE LENGTH=263
          Length = 263

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 77/174 (44%), Gaps = 36/174 (20%)

Query: 2   LLRNRSRAVTKPP-----LMADHSSNPSPNQ-NCAKTIPSLFGSPKFRDFTNKCLSAGTD 55
           +LRN+ RA          LMAD    P PN  +C+   PSLF SPKFR FT+K +    D
Sbjct: 1   MLRNKPRAAVTTKKQTSLLMADQPPPPKPNTCHCS---PSLFSSPKFRFFTSKMMMTPFD 57

Query: 56  ---ALRSPTSILDTRSFIPSFGFGNPFSHDKSTQTFPLKTSETRSSMVSKGIGLALVGDF 112
              +L SPTSIL+    I S     P S+ + T   P +             GLA +   
Sbjct: 58  SDFSLVSPTSILEANPSIFSSKNPKPVSYFEPTIPNPQRFHS------PDVFGLADL--V 109

Query: 113 KDELVDEKNSAEPIKGSVFLGKQLRVKIPPLEYPSSFSPSKSQTHGGHDFGTKT 166
           KD   +  +S +P+   V  G +LRV+IP                   DFGTKT
Sbjct: 110 KDGDSNRDHSRKPVNKMVLFGSKLRVQIP----------------SSADFGTKT 147