Miyakogusa Predicted Gene

Lj1g3v4435510.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4435510.1 Non Chatacterized Hit- tr|I1J614|I1J614_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,87.78,0,DEAH_ATP_HELICASE,DNA/RNA helicase, ATP-dependent,
DEAH-box type, conserved site; ATP-DEPENDENT RNA ,gene.g36478.t1.1
         (581 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26370.1 | Symbols:  | RNA helicase family protein | chr1:912...   830   0.0  
AT3G26560.1 | Symbols:  | ATP-dependent RNA helicase, putative |...   499   e-141
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1...   477   e-135
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote...   477   e-135
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei...   476   e-134
AT4G18465.1 | Symbols:  | RNA helicase family protein | chr4:101...   438   e-123
AT2G47250.1 | Symbols:  | RNA helicase family protein | chr2:193...   437   e-123
AT3G62310.1 | Symbols:  | RNA helicase family protein | chr3:230...   437   e-122
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c...   416   e-116
AT1G27900.1 | Symbols:  | RNA helicase family protein | chr1:971...   355   6e-98
AT4G16680.1 | Symbols:  | P-loop containing nucleoside triphosph...   324   8e-89
AT5G10370.1 | Symbols:  | helicase domain-containing protein / I...   251   1e-66
AT4G01020.1 | Symbols:  | helicase domain-containing protein / I...   238   8e-63
AT2G35920.1 | Symbols:  | RNA helicase family protein | chr2:150...   215   6e-56
AT1G48650.2 | Symbols:  | DEA(D/H)-box RNA helicase family prote...   192   5e-49
AT1G48650.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...   192   6e-49
AT2G01130.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...   187   2e-47
AT1G58060.1 | Symbols:  | RNA helicase family protein | chr1:214...   176   4e-44
AT5G14900.1 | Symbols:  | helicase associated (HA2) domain-conta...   164   2e-40
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204...   161   1e-39
AT1G58050.1 | Symbols:  | RNA helicase family protein | chr1:214...   161   1e-39
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu...   161   1e-39
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei...   159   5e-39
AT5G04895.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...   155   7e-38
AT2G47680.1 | Symbols:  | zinc finger (CCCH type) helicase famil...    94   2e-19

>AT1G26370.1 | Symbols:  | RNA helicase family protein |
           chr1:9122030-9125368 REVERSE LENGTH=717
          Length = 717

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/578 (68%), Positives = 478/578 (82%), Gaps = 3/578 (0%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           MTDGLLLREALLDP+LS+YSVIIVDEAH+R+VHTDVLL LLK +Q TRS+ +S  +   F
Sbjct: 138 MTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVS--EKTEF 195

Query: 61  GNKHVNNVLLSDKENG-QSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHI 119
           GN        +   NG Q +  L+    +K+SPLKLIIMSASLDAR F EYFGGAKAVH+
Sbjct: 196 GNVASQVQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHV 255

Query: 120 EGRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKL 179
           +GRQFPVDI YT   E+DY+DA L+TIFQIH  E PGDILVFLTGQ+EIESVE  ++E+L
Sbjct: 256 QGRQFPVDILYTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERL 315

Query: 180 TQLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDP 239
             +P++ +KLL   IF+ALPSEQQ++VFAP P+G RKVILATNIAETS+TIPGI+YVIDP
Sbjct: 316 QNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDP 375

Query: 240 GLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFEKLEDSTMP 299
           G VKARSYDP KGMESL +VP SK+Q +QRSGRAGREGPGK FRLYPE EFEKLEDST P
Sbjct: 376 GFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKP 435

Query: 300 EIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVG 359
           EIKRCNLSN+ILQLKALG+DDI+GFDFI+KPSR AIIK+L +L  LGAL D+  L +PVG
Sbjct: 436 EIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVG 495

Query: 360 RQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVPRDMLAESRIATKCFSS 419
            QM+RLPL+PVY+KALI A+QFNCLEEMLITVA+LSVESIFY PR+   E+R +   F+S
Sbjct: 496 YQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFAS 555

Query: 420 PEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHACDIHRQIK 479
            EGDH+T ++VYR S++FLEKR    S    +K+++KWCKEN++NSRSL+HA DI+RQI+
Sbjct: 556 VEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIR 615

Query: 480 GHVQQMGLNLASCGDDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQVVQIHPSSVLFR 539
            HV+Q+G N++SCG+DML FRRCL ASFFL AA +Q DGTYRAL SG+VV IHP+SVLFR
Sbjct: 616 EHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFR 675

Query: 540 QKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYY 577
            KPECVIFNEL+QT+ KY++NLT +D LWL+ELAP ++
Sbjct: 676 AKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHF 713


>AT3G26560.1 | Symbols:  | ATP-dependent RNA helicase, putative |
            chr3:9750122-9753719 REVERSE LENGTH=1168
          Length = 1168

 Score =  499 bits (1285), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 255/582 (43%), Positives = 362/582 (62%), Gaps = 58/582 (9%)

Query: 1    MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
            MTDG+LLRE L+D  LS+YSVI++DEAHERT+HTDVL GLLK +                
Sbjct: 611  MTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLM--------------- 655

Query: 61   GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                                       K+   L+LI+ SA+LDA  F  YF       I 
Sbjct: 656  ---------------------------KRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIP 688

Query: 121  GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
            GR FPV+I YT++ ETDYLDAALIT+ QIHL E  GDILVFLTGQEEI+S    + E++ 
Sbjct: 689  GRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMK 748

Query: 181  QLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDPG 240
             L +   +L++ P+++ALPSE Q R+F PPP G RKV++ATNIAE S+TI GI YV+DPG
Sbjct: 749  GLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPG 808

Query: 241  LVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFE-KLEDSTMP 299
              K   Y+P +G+ESL+I P S++ A QR+GRAGR GPGKC+RLY E  +  ++  +++P
Sbjct: 809  FAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIP 868

Query: 300  EIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVG 359
            EI+R NL    L +KA+G++D+L FDF++ P   A+I ++EQL+ LGAL +E  L+  +G
Sbjct: 869  EIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTK-LG 927

Query: 360  RQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVPRDMLAESRIATKCFSS 419
            R+MA  PL+P  +K L+ +    C +E+L  +AM+   +IFY PR+  A++      F  
Sbjct: 928  RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQ 987

Query: 420  PEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHACDIHRQIK 479
            PEGDH+TL+ VY A       ++   S P        WC ENFI SRSLR A D+ +Q+ 
Sbjct: 988  PEGDHLTLLAVYEAW------KAKNFSGP--------WCFENFIQSRSLRRAQDVRKQLL 1033

Query: 480  GHVQQMGLNLASCGDDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQVVQIHPSSVLFR 539
              + +  L++ + G +  + R+ + A FF + A K P   YR L   Q V IHPSS LF+
Sbjct: 1034 SIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQ 1093

Query: 540  QKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYYAMQN 581
            ++P+ VI+++L+ T  +Y+R +T +D  WL ELAP+++ + +
Sbjct: 1094 RQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSD 1135


>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
            chr1:11742356-11749286 REVERSE LENGTH=1034
          Length = 1034

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/584 (42%), Positives = 362/584 (61%), Gaps = 60/584 (10%)

Query: 1    MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
            MTDG+LLRE L +P L+ YSV+IVDEAHERT+ TD+L GL+K++                
Sbjct: 490  MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDI---------------- 533

Query: 61   GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                               +  R D       LKL+I SA++DA  F +YF  A      
Sbjct: 534  -------------------ARFRPD-------LKLLISSATMDAEKFSDYFDTAPIFSFP 567

Query: 121  GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
            GR++PV+I YT   E DY+DAA++TI  IH+ E  GDILVF TGQEEIE+ E  +K ++ 
Sbjct: 568  GRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIR 627

Query: 181  QLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDPG 240
             L  + ++L++ PI+A LPSE Q ++F P P G RKV+LATNIAETS+TI GIKYV+DPG
Sbjct: 628  GLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPG 687

Query: 241  LVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFEK-LEDSTMP 299
              K +SY+P  GMESL+I P SK+ A QR+GRAGR  PGKC+RLY    +   LE++T+P
Sbjct: 688  FSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVP 747

Query: 300  EIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVG 359
            E++R NL++V+L LK+LG+ D++ FDF++ P   A++KSLE LF LGAL     L+   G
Sbjct: 748  EVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELT-KAG 806

Query: 360  RQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSV-ESIFYVPRDMLAESRIATKCFS 418
            R+MA  PLDP+ +K ++ + ++ C +E++   AMLS+  SIFY P+D    +  A   F 
Sbjct: 807  RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFH 866

Query: 419  SPE-GDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHACDIHRQ 477
            +   GDHI L+ VY              S  K      +WC EN+I  RS++ A DI  Q
Sbjct: 867  TGNVGDHIALLKVY--------------SSWKETNFSTQWCYENYIQVRSMKRARDIRDQ 912

Query: 478  IKGHVQQMGLNLASCGDDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQVVQIHPSSVL 537
            ++G ++++ ++++S  +++   R+ +VA FF + A  Q +G+YR +   Q V IHP+S L
Sbjct: 913  LEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGL 972

Query: 538  FRQKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYYAMQN 581
             +  P  V+++EL+ T+ +Y+R +T +   WL ELAP YY +++
Sbjct: 973  SQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1016


>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
            chr1:11742356-11749286 REVERSE LENGTH=1044
          Length = 1044

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/584 (42%), Positives = 362/584 (61%), Gaps = 60/584 (10%)

Query: 1    MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
            MTDG+LLRE L +P L+ YSV+IVDEAHERT+ TD+L GL+K++                
Sbjct: 500  MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDI---------------- 543

Query: 61   GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                               +  R D       LKL+I SA++DA  F +YF  A      
Sbjct: 544  -------------------ARFRPD-------LKLLISSATMDAEKFSDYFDTAPIFSFP 577

Query: 121  GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
            GR++PV+I YT   E DY+DAA++TI  IH+ E  GDILVF TGQEEIE+ E  +K ++ 
Sbjct: 578  GRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIR 637

Query: 181  QLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDPG 240
             L  + ++L++ PI+A LPSE Q ++F P P G RKV+LATNIAETS+TI GIKYV+DPG
Sbjct: 638  GLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPG 697

Query: 241  LVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFEK-LEDSTMP 299
              K +SY+P  GMESL+I P SK+ A QR+GRAGR  PGKC+RLY    +   LE++T+P
Sbjct: 698  FSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVP 757

Query: 300  EIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVG 359
            E++R NL++V+L LK+LG+ D++ FDF++ P   A++KSLE LF LGAL     L+   G
Sbjct: 758  EVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELT-KAG 816

Query: 360  RQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSV-ESIFYVPRDMLAESRIATKCFS 418
            R+MA  PLDP+ +K ++ + ++ C +E++   AMLS+  SIFY P+D    +  A   F 
Sbjct: 817  RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFH 876

Query: 419  SPE-GDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHACDIHRQ 477
            +   GDHI L+ VY              S  K      +WC EN+I  RS++ A DI  Q
Sbjct: 877  TGNVGDHIALLKVY--------------SSWKETNFSTQWCYENYIQVRSMKRARDIRDQ 922

Query: 478  IKGHVQQMGLNLASCGDDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQVVQIHPSSVL 537
            ++G ++++ ++++S  +++   R+ +VA FF + A  Q +G+YR +   Q V IHP+S L
Sbjct: 923  LEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGL 982

Query: 538  FRQKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYYAMQN 581
             +  P  V+++EL+ T+ +Y+R +T +   WL ELAP YY +++
Sbjct: 983  SQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1026


>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
            chr2:14872728-14879615 FORWARD LENGTH=1044
          Length = 1044

 Score =  476 bits (1225), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/584 (42%), Positives = 358/584 (61%), Gaps = 60/584 (10%)

Query: 1    MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
            MTDG+LLRE L +P L  YSVIIVDEAHERT+ TD+L GL+K++   R            
Sbjct: 500  MTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARP----------- 548

Query: 61   GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                                            LKL+I SA++DA  F ++F  A      
Sbjct: 549  -------------------------------DLKLLISSATMDAEKFSDFFDQAPIFRFP 577

Query: 121  GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
            GR++PVDI +T   E DY+DAA+ T+  IH+ E  GD+LVFL GQEEIE+VE  +K K+ 
Sbjct: 578  GRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIR 637

Query: 181  QLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDPG 240
             L  + ++L++ PI+A LPSE Q ++F P P G RKV+LATNIAETS+TI GIKYV+DPG
Sbjct: 638  GLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPG 697

Query: 241  LVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIE-FEKLEDSTMP 299
              K +SY+P  GMESL++ P SK+ A QR+GRAGR  PGKC+RLY     +  LED+T+P
Sbjct: 698  FSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVP 757

Query: 300  EIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVG 359
            EI+R NL++V+L LK+LG+ ++L FDF++ P   A+IKSLE LF LGAL     L+   G
Sbjct: 758  EIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELT-KAG 816

Query: 360  RQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSV-ESIFYVPRDMLAESRIATKCFS 418
            R+MA  PLDP+ +K ++ + ++ C +E++   AMLS+  SIFY P+D    +  A K F 
Sbjct: 817  RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFH 876

Query: 419  SPE-GDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHACDIHRQ 477
                GDHI  + +Y +               K      +WC EN+I  RS++ A DI  Q
Sbjct: 877  VGNVGDHIAFLKIYNSW--------------KETNYSTQWCYENYIQVRSMKRARDIRDQ 922

Query: 478  IKGHVQQMGLNLASCGDDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQVVQIHPSSVL 537
            ++G ++++ ++++S  +++   R+ +VA FF + A  Q +G+YR +   Q V IHP+S L
Sbjct: 923  LEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGL 982

Query: 538  FRQKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYYAMQN 581
             +  P  V++++L+ T+ +Y+R +T +   WL E+AP YY +++
Sbjct: 983  SQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKD 1026


>AT4G18465.1 | Symbols:  | RNA helicase family protein |
           chr4:10197056-10201611 FORWARD LENGTH=695
          Length = 695

 Score =  438 bits (1127), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/597 (39%), Positives = 349/597 (58%), Gaps = 76/597 (12%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           +TDG+L+RE + DP L+KYSVI++DEAHER++ TD+LLGLLK +Q  R            
Sbjct: 146 LTDGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRPE---------- 195

Query: 61  GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVH-- 118
                                           L+LII SA+++A+    +F  +K  H  
Sbjct: 196 --------------------------------LRLIISSATIEAKTMSNFFNSSKKRHAP 223

Query: 119 ---------------IEGRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLT 163
                          +EGR F V I Y     +DY+ + + TI  I+  E PGD+LVFLT
Sbjct: 224 EGSTPGPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLT 283

Query: 164 GQEEIESVEGQIKEKLTQLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNI 223
           GQE+IE+    ++E+     + S  LL  P+++ L   +Q  +F P P G RKVIL+TNI
Sbjct: 284 GQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNI 343

Query: 224 AETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFR 283
           AETS+T+ G+ YVID G  K + Y+P   +ESL++ P SK+ A QRSGRAGR  PGKC+R
Sbjct: 344 AETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYR 403

Query: 284 LYPEIEF-EKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQL 342
           LY E  F  ++    +PE++R NL + ++QLKALG+D+ILGFD+   PS  A+I++LE L
Sbjct: 404 LYTEDYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPAPPSSEAMIRALEVL 463

Query: 343 FLLGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYV 402
           + L  L D+  L+ P G Q+A LPLDP+ +K ++ +S+  C  E++   A+LSV+S++ +
Sbjct: 464 YSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWII 523

Query: 403 PRDMLAESRIATKCFSSPEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENF 462
            R +  E   A   F++ EGDH+T +NVY+    FLE +     KP       +WC +NF
Sbjct: 524 ARGVQKEQDEAKLRFAAAEGDHVTFLNVYKG---FLESK-----KPT------QWCYKNF 569

Query: 463 INSRSLRHACDIHRQIKGHVQQMGLNLASCGDDMLQFRRCLVASFFLNAAIKQP--DGTY 520
           +N +S++   +I  Q+K   +++G+ L SC  DM   R+ + A FF NA   +P  +G Y
Sbjct: 570 LNYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAGFFANACRLEPHSNGVY 629

Query: 521 RALASGQVVQIHPSSVLFRQKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYY 577
           + +   + V IHPSSVLFR  P+ V++  ++ T  +Y+RN+  ++  WLTE+AP +Y
Sbjct: 630 KTIRGSEEVYIHPSSVLFRVNPKWVVYQSIVSTERQYMRNVVTINPSWLTEVAPHFY 686


>AT2G47250.1 | Symbols:  | RNA helicase family protein |
           chr2:19399923-19402981 REVERSE LENGTH=729
          Length = 729

 Score =  437 bits (1124), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/593 (40%), Positives = 340/593 (57%), Gaps = 70/593 (11%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           +TDG+LLREA+ DP L +Y VII+DEAHERT+ TDVL GLLK V   R            
Sbjct: 167 LTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRP----------- 215

Query: 61  GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                                           LKL++MSA+L+A  F EYF GA  + + 
Sbjct: 216 -------------------------------DLKLVVMSATLEAEKFQEYFSGAPLMKVP 244

Query: 121 GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
           GR  PV+IFYT+  E DYL+AA+ T+ QIH+ E PGDILVFLTG+EEIE    +I ++++
Sbjct: 245 GRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVS 304

Query: 181 QLPQESQKLLVAPIFAALPSEQQLRVFAPPP-------SGCRKVILATNIAETSVTIPGI 233
            L  +   + V P+++ LP   Q ++F P P          RK++++TNIAETS+TI GI
Sbjct: 305 NLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGI 364

Query: 234 KYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFEK- 292
            YVIDPG  K + Y+P   +ESL++ P SK+ A QRSGRAGR  PGKCFRLY E  F   
Sbjct: 365 VYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNND 424

Query: 293 LEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDEC 352
           L+  T PEI R NL+N +L LK LG+DD++ FDF++ P+   ++++LE L  LGAL DE 
Sbjct: 425 LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEG 484

Query: 353 HLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVPRDMLAESRI 412
           +L+   G  M+  PLDP  +K LI + +FNC  E+L   AMLSV + F  PR+    +  
Sbjct: 485 NLTK-TGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADE 543

Query: 413 ATKCFSSPEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHAC 472
           A   F   +GDH+TL+NVY A               K       WC ENF+N+R+++ A 
Sbjct: 544 AKARFGHIDGDHLTLLNVYHAY--------------KQNNEDPNWCFENFVNNRAMKSAD 589

Query: 473 DIHRQIKGHVQQMGLNLASCG----DDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQV 528
           ++ +Q+   + +  L + S      D  +  R+ ++A +F+  A  +  G Y  +   QV
Sbjct: 590 NVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQV 649

Query: 529 VQIHPSSVLFRQKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYYAMQN 581
           V +HPS+ L   KPE VI+NE + T   ++R +T +   WL ++A  YY + N
Sbjct: 650 VHLHPSNCL-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSN 701


>AT3G62310.1 | Symbols:  | RNA helicase family protein |
           chr3:23057516-23060561 REVERSE LENGTH=726
          Length = 726

 Score =  437 bits (1123), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/593 (40%), Positives = 341/593 (57%), Gaps = 70/593 (11%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           +TDG+LLREA+ DP L +Y VII+DEAHERT+ TDVL GLLK V   R            
Sbjct: 163 LTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPD---------- 212

Query: 61  GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                                           LKL++MSA+L+A  F +YF GA  + + 
Sbjct: 213 --------------------------------LKLVVMSATLEAEKFQDYFSGAPLMKVP 240

Query: 121 GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
           GR  PV+IFYT+  E DYL+AA+ T+ QIH+ E PGDILVFLTG+EEIE    +I +++ 
Sbjct: 241 GRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVG 300

Query: 181 QLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGC-------RKVILATNIAETSVTIPGI 233
            L  +   + V P+++ LP   Q ++F P P          RK++++TNIAETS+TI GI
Sbjct: 301 NLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGI 360

Query: 234 KYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFEK- 292
            YVIDPG  K + Y+P   +ESL++ P SK+ A QRSGRAGR  PGKCFRLY E  F   
Sbjct: 361 VYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNND 420

Query: 293 LEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDEC 352
           L+  T PEI R NL+N +L LK LG+DD++ FDF++ P+   ++++LE L  LGAL D+ 
Sbjct: 421 LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDG 480

Query: 353 HLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVPRDMLAESRI 412
           +L+   G  M+  PLDP  AK LI + +FNC  E+L   AMLSV + F  PR+    +  
Sbjct: 481 NLTK-TGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADE 539

Query: 413 ATKCFSSPEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHAC 472
           A   F   EGDH+TL+NVY A     E  +              WC ENFIN+R+++ A 
Sbjct: 540 AKARFGHIEGDHLTLLNVYHAFKQNNEDPN--------------WCYENFINNRAMKSAD 585

Query: 473 DIHRQIKGHVQQMGLNLASCG----DDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQV 528
           ++ +Q+   + +  L + S      D  +  R+ ++A +F+  A  +  G Y  +   QV
Sbjct: 586 NVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQV 645

Query: 529 VQIHPSSVLFRQKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYYAMQN 581
           V +HPS+ L   KPE VI+NE + T+  ++R +T +   WL ++A  YY + N
Sbjct: 646 VHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSN 697


>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
            chr5:4122747-4128660 FORWARD LENGTH=1255
          Length = 1255

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/588 (37%), Positives = 347/588 (59%), Gaps = 64/588 (10%)

Query: 1    MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
            MTDG+LLRE L D  L KY V+++DEAHER+++TDVL G+LK V + R R          
Sbjct: 654  MTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKV-VARRRD--------- 703

Query: 61   GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                                             KLI+ SA+L+A+ F  +FG     +I 
Sbjct: 704  --------------------------------FKLIVTSATLNAQKFSNFFGSVPIFNIP 731

Query: 121  GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
            GR FPV+I Y++    DY++AA+     IH+   PGDIL+F+TGQ+EIE+    +KE++ 
Sbjct: 732  GRTFPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERME 791

Query: 181  QLPQESQK----LLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYV 236
            QL   S +    LL+ PI++ LP++ Q ++F  P  G RK I+ATNIAETS+T+ GI YV
Sbjct: 792  QLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYV 851

Query: 237  IDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEF-EKLED 295
            ID G  K + ++P  GM++L + P S++ + QR+GRAGR GPG C+RLY E  +  ++  
Sbjct: 852  IDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLP 911

Query: 296  STMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECHLS 355
            S +PEI+R NL NV+L LK+L +D++L FDF++ P +  I+ S+ QL++LGAL +   L+
Sbjct: 912  SPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLT 971

Query: 356  DPVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVPRDMLAESRIATK 415
            D +G +M   PLDP  AK L+   + +C++E+L  V+MLSV S+F+ P++   ES  A +
Sbjct: 972  D-LGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAARE 1030

Query: 416  CFSSPEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHACDIH 475
             F  PE DH+TL+NVY+              + K       WC ++++  + LR A ++ 
Sbjct: 1031 KFFVPESDHLTLLNVYQ--------------QWKEHDYRGDWCNDHYLQVKGLRKAREVR 1076

Query: 476  RQIKGHVQQMGLNLASCGDDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQVVQIHPSS 535
             Q+   ++Q+ + L SCG D    R+ + +++F N+A  +  G Y    +G    +HPSS
Sbjct: 1077 SQLLDILKQLKIELRSCGPDWDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSS 1136

Query: 536  VLF--RQKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYYAMQN 581
             L+     P+ V+++EL+ T  +Y++  T V+  WL EL P ++++++
Sbjct: 1137 ALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELGPMFFSVKD 1184


>AT1G27900.1 | Symbols:  | RNA helicase family protein |
           chr1:9715615-9720346 REVERSE LENGTH=700
          Length = 700

 Score =  355 bits (910), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 213/597 (35%), Positives = 334/597 (55%), Gaps = 82/597 (13%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           +TDG+LLRE+L +P L  YSVII+DEAHER+++TD+LLGL+K  +L R R+         
Sbjct: 100 LTDGVLLRESLSNPMLDDYSVIILDEAHERSLNTDILLGLVK--RLVRIRA--------- 148

Query: 61  GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                                         S  K++I SA+LD     E+F G   +++ 
Sbjct: 149 ------------------------------SNFKVLITSATLDGEKVSEFFSGCPVLNVP 178

Query: 121 GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
           G+ +PV+I Y++     Y++++L     IH+ E  GDIL+F+TGQ++IE +  +++EK+ 
Sbjct: 179 GKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVR 238

Query: 181 QLPQES-QKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDP 239
            L + S    ++ P+  +LP E Q+RVF+PPP  CR+ I++TNIAETS+T+ G+ YVID 
Sbjct: 239 SLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDS 298

Query: 240 GLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYP-EIEFEKLEDSTM 298
           G VK R Y+P  GM SL ++  SK QA QR+GRAGR  PGKC+RLYP  +  +   D+T+
Sbjct: 299 GYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATI 358

Query: 299 PEIKRCNLSNVILQLKALGVD--DILGFDFIEKPSRAAIIKSLEQLFLLGALTDECHLSD 356
           PEI+R +L+  +L LK+L +   DIL FDF++ PS  ++  +L+QL+ + A+ DE     
Sbjct: 359 PEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAI-DENGAIT 417

Query: 357 PVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVPRDMLAESRIATKC 416
            +GR M+ LPL+P  ++ LI A++  CL + L  VAMLS E+     R   +E +     
Sbjct: 418 RIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDE 477

Query: 417 FS-----SPEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHA 471
            S     S  GDHI L+ ++ + +           +   + V   WCKEN +  R +   
Sbjct: 478 DSNLPNGSGYGDHIQLLQIFESWD-----------RTNYDPV---WCKENGMQVRGMVFV 523

Query: 472 CDIHRQIKGHVQQMGLNLASCG---------DDMLQFRR--CLVASFFLNAAIKQPDGTY 520
            D+ RQ+   +Q++  +    G         DD  + R+  C+  +  +   + + +G Y
Sbjct: 524 KDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNG-Y 582

Query: 521 RALA-SGQVVQIHPSSVLFRQK----PECVIFNELLQTNNKYVRNLTRVDYLWLTEL 572
           R L+   Q+VQ+HPSSVL        P  V+++EL+ T   ++RN+  VD  W+  +
Sbjct: 583 RTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPI 639


>AT4G16680.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:9388613-9390774
           REVERSE LENGTH=656
          Length = 656

 Score =  324 bits (831), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 165/350 (47%), Positives = 227/350 (64%), Gaps = 45/350 (12%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           MTDG+LLRE L++P L  YSVII+DEAHERT+ TD+L  L+K+V                
Sbjct: 311 MTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDV---------------- 354

Query: 61  GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                              + +R D       L+LII SA+L+A+ F EYF  A+   I 
Sbjct: 355 -------------------AKVRPD-------LRLIISSATLEAKKFSEYFDSARIYLIP 388

Query: 121 GRQFPVDIFYTRRAETDYLDAALITIFQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLT 180
           GR++PV+  + +  E DYL+  + T+ QIH  E  GDILVFLTGQEEIE+VE  +K ++ 
Sbjct: 389 GRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMM 448

Query: 181 QLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDPG 240
            L  +  ++++ PI++ LP+  Q +VF P P G RKV+LATNIAETS+TI G+KYVIDPG
Sbjct: 449 DLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPG 508

Query: 241 LVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFEKLEDSTMPE 300
             K  SY+P  GMESL++ P SK+ A QR+GR+GR GPGKCFRLY     + LE +T+PE
Sbjct: 509 YCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLY---NIKDLEPTTIPE 565

Query: 301 IKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTD 350
           I+R NL++V+L LK+LG+ D+  FDF++ P   A++K+LE L+ LGAL +
Sbjct: 566 IQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGALDE 615


>AT5G10370.1 | Symbols:  | helicase domain-containing protein / IBR
           domain-containing protein / zinc finger protein-related
           | chr5:3261245-3267188 FORWARD LENGTH=1775
          Length = 1775

 Score =  251 bits (640), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 190/605 (31%), Positives = 292/605 (48%), Gaps = 99/605 (16%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           MTD  LL+  + D  LS  S +I+DEAHER+++TD+LL     ++   SR I        
Sbjct: 403 MTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLL---ALLKKLLSRRID------- 452

Query: 61  GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                                           L+L+IMSA+ DA+   +YF     + + 
Sbjct: 453 --------------------------------LRLVIMSATADAKQLSQYFFSCGILLVN 480

Query: 121 GRQFPVDIFYTRRAETD---------YLDAALITIFQIHLAEGPGDILVFLTGQEEIE-S 170
           GR FPV+I Y+     +         Y+   +    +IH  E  G IL FLT Q E+E +
Sbjct: 481 GRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWA 540

Query: 171 VEGQIKEKLTQLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTI 230
            E  I      LP          +   L  E+Q RVF   P G RKVI ATNIAETS+TI
Sbjct: 541 CERFITPSAIALP----------LHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTI 589

Query: 231 PGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEF 290
           PG+KYVID G+VK   Y+P  GM  L +   S+S A QR+GRAGR  PG+C+RLY + +F
Sbjct: 590 PGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDF 649

Query: 291 EKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTD 350
           + +  +  PEI+R +L   +L++ ALGV++I  F+F++ P   AI  +++ L  LGA+ +
Sbjct: 650 DSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVE 709

Query: 351 E--CHLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVP----R 404
           +   H     G  + +L L+P   K ++   +    +E ++  A+++  S  +       
Sbjct: 710 KNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFD 769

Query: 405 DMLAESRIATKCFSSPEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFIN 464
           D +   R+  + F +  GD  TL++VY+       +R              KWC EN +N
Sbjct: 770 DKMKADRLKVQ-FCNQNGDLFTLLSVYKEWASLPRERR------------NKWCWENSLN 816

Query: 465 SRSLRHACDIHRQIKGHVQQ-----------MGLNLASCGDDMLQFRRCLVASFFLNAAI 513
           ++S+R   D  ++++  +++              N  +  D  L+    ++AS   N A+
Sbjct: 817 AKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKHLKM--VILASLAENVAM 874

Query: 514 KQPDGT--YRALASGQVVQIHPSSVL--FRQKPECVIFNELLQTNNKYVRNLTRVDYLWL 569
                   Y    +GQ VQ+HPS  L  F QKP  V+F ELL   ++Y+  +T  D+  L
Sbjct: 875 YTGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEAL 934

Query: 570 TELAP 574
             L P
Sbjct: 935 YMLDP 939


>AT4G01020.1 | Symbols:  | helicase domain-containing protein / IBR
           domain-containing protein / zinc finger protein-related
           | chr4:439086-445043 FORWARD LENGTH=1787
          Length = 1787

 Score =  238 bits (607), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 183/612 (29%), Positives = 290/612 (47%), Gaps = 99/612 (16%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           MTD  LL+  + D  LS  S +I+DEAHE                    RS+        
Sbjct: 400 MTDNCLLQHYMKDRSLSGISCVIIDEAHE--------------------RSL-------- 431

Query: 61  GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYFGGAKAVHIE 120
                         N     +L +    +   L+L+IMSA+ DA    +Y      +H+ 
Sbjct: 432 --------------NTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVN 477

Query: 121 GRQFPVDIFYTRRAETD---------YLDAALITIFQIHLAEGPGDILVFLTGQEEIESV 171
           GR FPV+I Y+     +         Y    +    +IH  E  G IL FLT Q E+E  
Sbjct: 478 GRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWA 537

Query: 172 EGQIKEKLTQLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIP 231
                E+       +   +  P+   L  E+Q  VF   P G RKVI ATNIAETS+TIP
Sbjct: 538 ----CERFV-----APSAIALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIP 587

Query: 232 GIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFE 291
           G+KYVID G+VK   Y+P  GM  L +   S+S A QR+GRAGR  PG+C+RLY + +F+
Sbjct: 588 GVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFD 647

Query: 292 KLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDE 351
            +  +  PEI+R +L   +L++ ALG+D+I  F+F++ P   AI  +++ L  LGA+ ++
Sbjct: 648 SMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEK 707

Query: 352 CHLSDPV--GRQMARLPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVP----RD 405
             + +    G  + +L L+P   K ++   +    +E ++  A+++  S  +       D
Sbjct: 708 NGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDD 767

Query: 406 MLAESRIATKCFSSPEGDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINS 465
            +   R+  + F +  GD  TL++VY+             S P+  +   KWC EN +N+
Sbjct: 768 KMKADRLKVQ-FCNDNGDLFTLLSVYKEW----------ASLPRDRR--NKWCWENSLNA 814

Query: 466 RSLRHACDIHRQIKGHVQQ-----------MGLNLASCGDDMLQFRRCLVASFFLNAAIK 514
           +S+R   D  ++++  +++              N  +  D  L+    ++AS   N A+ 
Sbjct: 815 KSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKYLKM--VILASLAENVAMY 872

Query: 515 QPDGT--YRALASGQVVQIHPSSVL--FRQKPECVIFNELLQTNNKYVRNLTRVDY--LW 568
                  Y    + Q VQ+HPS  L  F QKP  V+F ELL   ++Y+  +T  D+  L+
Sbjct: 873 TGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALY 932

Query: 569 LTELAPQYYAMQ 580
           + +  P + A Q
Sbjct: 933 MLDPPPPFDASQ 944


>AT2G35920.1 | Symbols:  | RNA helicase family protein |
           chr2:15075674-15080506 FORWARD LENGTH=995
          Length = 995

 Score =  215 bits (548), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 282/619 (45%), Gaps = 79/619 (12%)

Query: 2   TDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTR--------SRSI- 52
           T G+LLR  + DP L+  S ++VDE HER ++ D LL +L+++   R        S +I 
Sbjct: 329 TTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATIN 388

Query: 53  SDGQGLNFGN-----------------------KHVNNVLLSDKENGQSSSSLRKDHHKK 89
           +D     FGN                       K   N+  SD  N Q SS  R+   + 
Sbjct: 389 ADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSDSGNYQGSSRGRRRESES 448

Query: 90  ISPLKLIIMSASLDARAFCEYFGGAKAVHIE---GRQFPVDIFYTRRAETDYLDAALITI 146
                L  +   +D  +  + +  A    +E   G Q  VD+                TI
Sbjct: 449 KKD-DLTTLFEDIDINSHYKSYSSATRNSLEAWSGAQIDVDLVEA-------------TI 494

Query: 147 FQIHLAEGPGDILVFLTGQEEIESVEGQIKEKLTQLPQESQKLLVAPIFAALPSEQQLRV 206
             I   EG G ILVFLTG +EI  +  +I   +     +S K LV P+  ++P+  Q  +
Sbjct: 495 EHICRLEGGGAILVFLTGWDEISKLLEKIN--MNNFLGDSSKFLVLPLHGSMPTVNQREI 552

Query: 207 FAPPPSGCRKVILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQA 266
           F  PP   RK++LATNIAE+S+TI  + YV+D G  K  SYD    +  L+    SK+ A
Sbjct: 553 FDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASA 612

Query: 267 MQRSGRAGREGPGKCFRLYPEIEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGF-- 324
            QR GRAGR   G C+RLYP++ ++      +PEI R  L  + L +K+L V  I  F  
Sbjct: 613 HQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLA 672

Query: 325 DFIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCL 384
             ++ P   A+  ++E L  +GAL D   L+ P+GR +  LP+DP   K L+  + F C+
Sbjct: 673 KALQPPDALAVENAIELLKTIGALNDVEELT-PLGRHLCTLPVDPNIGKMLLIGAIFQCV 731

Query: 385 EEMLITVAMLSVESIFYVPRDMLAESRIATKCFSSPE-GDHITLINVYRASNDFLEKRSM 443
              L   A L+  S F +P +   E+  A + F+     DHI L+  Y    D       
Sbjct: 732 NPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRD------- 784

Query: 444 EMSKPKSEKVLRKWCKENFINSRSLRHACDIHRQIKGHVQQMGLNLASCGD-------DM 496
              +  +EK    +C +NF++  +LR   D+  Q    +  +G    S  +       DM
Sbjct: 785 -AKRGGNEK---DFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDM 840

Query: 497 LQFRRCLVASFFLNAAIKQPDGTYRALASGQV--VQIHPSSVLFRQK---PECVIFNELL 551
                 L A  + N    +  G   A  + ++  V IHP SV  R        ++++E +
Sbjct: 841 EMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLPYLVYSEKV 900

Query: 552 QTNNKYVRNLTRV-DYLWL 569
           +T + Y+R+ T + DY  L
Sbjct: 901 KTTSVYIRDSTNISDYALL 919


>AT1G48650.2 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr1:17989517-17995169 REVERSE LENGTH=1206
          Length = 1206

 Score =  192 bits (488), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 179/603 (29%), Positives = 289/603 (47%), Gaps = 56/603 (9%)

Query: 2   TDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRS--RSISDGQGLN 59
           T G+LLR  L+D  L   + ++VDE HER ++ D LL +LK++   R   + I     LN
Sbjct: 400 TTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLN 459

Query: 60  -------FGNK---HVNNVLLSDK----ENGQSSSSLRKDHHKKISPL---KLIIMSASL 102
                  FG     H+       +    E+   +S  R   + +I      K   M    
Sbjct: 460 AELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQA 519

Query: 103 DARAFCEYFGGAKAVHIEGRQFPVDIFYTRRA----ETDYLDAALITIFQIHLAEG--PG 156
             +        A    +E   F    F TR +      D +   LI     H+ +G  PG
Sbjct: 520 QFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPG 579

Query: 157 DILVFLTGQEEIESVEGQIKEKLTQLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRK 216
            +LVF+TG ++I S++ Q++     L  +  K+L+     ++ S +Q  +F  PP G RK
Sbjct: 580 AVLVFMTGWDDINSLKNQLEAH--SLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRK 637

Query: 217 VILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGRE 276
           ++LATN+AETS+TI  + YVID G  K  SYD       L+    SK+ A QR GRAGR 
Sbjct: 638 IVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRV 697

Query: 277 GPGKCFRLYPEIEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGF--DFIEKPSRAA 334
            PG+C+ LYP   +E   D   PE+ R  L ++ LQ+K+LG+  I  F    ++ P   +
Sbjct: 698 MPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALS 757

Query: 335 IIKSLEQLFLLGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVAML 394
           +  ++E L ++GAL D+ +L+ P+G+ ++ LP++P   K LI  + FNCL+ ++  VA L
Sbjct: 758 VQNAVEYLKIIGALDDDENLT-PLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGL 816

Query: 395 SVESIFYVPRDMLAESRIATKCFSSPE-GDHITLINVYRASNDFLEKRSMEMSKPKSEKV 453
           SV   F +P D    +  A   FS  +  DH+TL+  Y    D     S           
Sbjct: 817 SVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSG---------- 866

Query: 454 LRKWCKENFINSRSLRHACDIHRQIKGHVQQMGL--NLASCGD---DMLQFRRCLVASFF 508
              +C +NF++S++L+    + +Q    +++  L  N+  C     D    R  + A  F
Sbjct: 867 -YDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMF 925

Query: 509 ---LNAAIKQPDGTYRALASGQVVQIHPSSVLFRQKP----ECVIFNELLQTNNKYVRNL 561
               +   K+   T + +  GQV+ ++ SSV     P      ++FN+ ++ N+ ++R+ 
Sbjct: 926 PGVCSVVNKEKSITLKTMEDGQVL-LYSSSV-NGNVPMIPFPWLVFNDKVKVNSVFLRDS 983

Query: 562 TRV 564
           T V
Sbjct: 984 TAV 986


>AT1G48650.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr1:17989670-17995169 REVERSE LENGTH=1197
          Length = 1197

 Score =  192 bits (488), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 179/603 (29%), Positives = 289/603 (47%), Gaps = 56/603 (9%)

Query: 2   TDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRS--RSISDGQGLN 59
           T G+LLR  L+D  L   + ++VDE HER ++ D LL +LK++   R   + I     LN
Sbjct: 400 TTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLN 459

Query: 60  -------FGNK---HVNNVLLSDK----ENGQSSSSLRKDHHKKISPL---KLIIMSASL 102
                  FG     H+       +    E+   +S  R   + +I      K   M    
Sbjct: 460 AELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQA 519

Query: 103 DARAFCEYFGGAKAVHIEGRQFPVDIFYTRRA----ETDYLDAALITIFQIHLAEG--PG 156
             +        A    +E   F    F TR +      D +   LI     H+ +G  PG
Sbjct: 520 QFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPG 579

Query: 157 DILVFLTGQEEIESVEGQIKEKLTQLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCRK 216
            +LVF+TG ++I S++ Q++     L  +  K+L+     ++ S +Q  +F  PP G RK
Sbjct: 580 AVLVFMTGWDDINSLKNQLEAH--SLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRK 637

Query: 217 VILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGRE 276
           ++LATN+AETS+TI  + YVID G  K  SYD       L+    SK+ A QR GRAGR 
Sbjct: 638 IVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRV 697

Query: 277 GPGKCFRLYPEIEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGF--DFIEKPSRAA 334
            PG+C+ LYP   +E   D   PE+ R  L ++ LQ+K+LG+  I  F    ++ P   +
Sbjct: 698 MPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALS 757

Query: 335 IIKSLEQLFLLGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVAML 394
           +  ++E L ++GAL D+ +L+ P+G+ ++ LP++P   K LI  + FNCL+ ++  VA L
Sbjct: 758 VQNAVEYLKIIGALDDDENLT-PLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGL 816

Query: 395 SVESIFYVPRDMLAESRIATKCFSSPE-GDHITLINVYRASNDFLEKRSMEMSKPKSEKV 453
           SV   F +P D    +  A   FS  +  DH+TL+  Y    D     S           
Sbjct: 817 SVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSG---------- 866

Query: 454 LRKWCKENFINSRSLRHACDIHRQIKGHVQQMGL--NLASCGD---DMLQFRRCLVASFF 508
              +C +NF++S++L+    + +Q    +++  L  N+  C     D    R  + A  F
Sbjct: 867 -YDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMF 925

Query: 509 ---LNAAIKQPDGTYRALASGQVVQIHPSSVLFRQKP----ECVIFNELLQTNNKYVRNL 561
               +   K+   T + +  GQV+ ++ SSV     P      ++FN+ ++ N+ ++R+ 
Sbjct: 926 PGVCSVVNKEKSITLKTMEDGQVL-LYSSSV-NGNVPMIPFPWLVFNDKVKVNSVFLRDS 983

Query: 562 TRV 564
           T V
Sbjct: 984 TAV 986


>AT2G01130.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr2:88847-94635 REVERSE LENGTH=1113
          Length = 1113

 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 216/426 (50%), Gaps = 33/426 (7%)

Query: 153 EGPGDILVFLTGQEEIESVEGQIKEKLTQLP--QESQKLLVAPIFAALPSEQQLRVFAPP 210
           EGPG IL+FLTG ++I S    +KEKL   P       +++     ++ + +Q  +F  P
Sbjct: 496 EGPGGILIFLTGWDDISS----LKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEP 551

Query: 211 PSGCRKVILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRS 270
            SG RK++LATNIAETS+TI  + +VID G  K  SYD       L+    SK  A QR 
Sbjct: 552 ASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRR 611

Query: 271 GRAGREGPGKCFRLYPEIEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGF--DFIE 328
           GRAGR  PG+C+ LYP+  ++   +  +PEI R  L ++ LQ+K+L +  I  F    ++
Sbjct: 612 GRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQ 671

Query: 329 KPSRAAIIKSLEQLFLLGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEML 388
            P   A+ K++  L ++GAL +   L+  +GR +++LP++P   K LI  +   CL+ +L
Sbjct: 672 SPELLAVQKAIAFLKIIGALDENEDLT-TLGRYLSKLPMEPKLGKMLILGAILGCLDPIL 730

Query: 389 ITVAMLSVESIFYVPRDMLAESRIATKCFSSPEGDHITLINVYRASNDFLEKRSMEMSKP 448
              A LSV   F  P+D    +  A   FS    DH+ L+  Y               K 
Sbjct: 731 TVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEG-----------WKKA 779

Query: 449 KSEKVLRKWCKENFINSRSLRHACDIHRQIKGHVQQMGL---NLASC---GDDMLQFRRC 502
           + E  +  +C +NF++ +SLR    + ++    ++  GL   N + C   G+D    R  
Sbjct: 780 EEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRAV 839

Query: 503 LVASFF---LNAAIKQPDGTYRALASGQVVQIHPSSVLFRQKP---ECVIFNELLQTNNK 556
           +    +    +    +   + + +  GQV+ ++ +S   R+       ++FNE ++ N+ 
Sbjct: 840 ICYGMYPGICSVVHNERSFSLKTMEDGQVL-LYSNSENARETKIPYPWLVFNEKIKVNSV 898

Query: 557 YVRNLT 562
           ++R+ T
Sbjct: 899 FLRDST 904


>AT1G58060.1 | Symbols:  | RNA helicase family protein |
            chr1:21489480-21501775 REVERSE LENGTH=1459
          Length = 1459

 Score =  176 bits (446), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 237/498 (47%), Gaps = 77/498 (15%)

Query: 132  RRAETDYLDAALITIFQIHLAEG--PGDILVFLTGQEEIESVEGQIKEKLTQLPQESQKL 189
            +R   D +D  L+     H+ +    G IL+FL G  EI  +   +          +  L
Sbjct: 890  KRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL 949

Query: 190  LVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDPGLVKARSYDP 249
            L  P+ +++ S +Q +VF  PP G RKVI ATNIAETS+TI  + YVID G  K   Y+P
Sbjct: 950  L--PLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNP 1007

Query: 250  GKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFEKL-EDSTMPEIKRCNLSN 308
             K + S++    S++ A QR+GRAGR  PG CF LY    FEKL     +PE+ R  L  
Sbjct: 1008 QKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVE 1067

Query: 309  VILQLKALGVDDILGF--DFIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVGRQMARLP 366
            + LQ+K LG+  I  F    +E PS  A+  ++  L  +GA+  +  L+ P+G  +A+LP
Sbjct: 1068 LCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELT-PLGHHLAKLP 1126

Query: 367  LDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVPRD-----------MLAESRIATK 415
            +D +  K L++   F CL  +L   A LS +S F  P+D           +L+++ +++ 
Sbjct: 1127 VDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSS 1186

Query: 416  CFSSPE--GDHITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHACD 473
              ++ +   DH+ ++  Y      L++R M        K  +++C+  F++S  +R   D
Sbjct: 1187 DLNNNDRQSDHLLMMVAYDKWVKILQERGM--------KAAQRFCESKFLSSSVMRMIRD 1238

Query: 474  IHRQIKGHVQQMGL-NLASCGD--------------DMLQ-----------FRRCLVASF 507
            +  Q    +  +GL NL   G+              D  Q            +  L A  
Sbjct: 1239 MRVQFGTLLADIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGL 1298

Query: 508  F--------------LNAAIKQPDGT--YRALASG-QVVQIHPSSV--LFR--QKPECVI 546
            +               N+  KQ + T  Y A   G + V IHPSS+   F+  Q P  ++
Sbjct: 1299 YPNIAANDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQNP-FLV 1357

Query: 547  FNELLQTNNKYVRNLTRV 564
            F E ++TN  Y+R+ T V
Sbjct: 1358 FLEKVETNKVYLRDTTIV 1375


>AT5G14900.1 | Symbols:  | helicase associated (HA2)
           domain-containing protein | chr5:4822676-4823581 REVERSE
           LENGTH=301
          Length = 301

 Score =  164 bits (415), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 153/284 (53%), Gaps = 23/284 (8%)

Query: 305 NLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVGRQMAR 364
           NL+N +L LK L V +++ FD I+ P+   + ++L+ L+ LGAL D+C+L+   G  M+ 
Sbjct: 3   NLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLT-KTGEMMSE 61

Query: 365 LPLDPVYAKALIFASQFNCLEEMLITVAMLSVESIFYVPR-DMLAESRIATKCFSSPEGD 423
            PLDP  AK LI + QFNC  E+L   AMLSV + F  PR +    +  A   F+  +GD
Sbjct: 62  FPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGD 121

Query: 424 HITLINVYRASNDFLEKRSMEMSKPKSEKVLRKWCKENFINSRSLRHACDIHRQIKGHVQ 483
           H+TL+N++ A   FL+        P        WC   FIN R+++ A  +  Q+   + 
Sbjct: 122 HLTLLNLFHA---FLQNN----QDP-------NWCCTKFINYRAMKSAVSVREQLVRIML 167

Query: 484 QMGLNLAS----CGDDMLQFRRCLVASFFLNAAIKQPDGTYRAL--ASGQVVQIHPSSVL 537
           +  + L S      D  +  R+ L+A +F+  A  +  G Y        QVV +HPS+ L
Sbjct: 168 RFQIKLCSPDFNSRDYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCL 227

Query: 538 FRQKPECVIFNELLQTNNKYVRNLTRVDYLWLTELAPQYYAMQN 581
              KPE V++NE + T+  ++R +T +   WL ++AP YY + N
Sbjct: 228 -DHKPEWVVYNEYVFTSRNFIRTVTHIRGEWLVDVAPHYYKLAN 270


>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
           chr1:2040567-2047333 FORWARD LENGTH=1576
          Length = 1576

 Score =  161 bits (408), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 179/343 (52%), Gaps = 28/343 (8%)

Query: 156 GDILVFLTGQEEIESVEGQIKEKL--TQLPQESQKLLVAPIFAALPSEQQLRVFAPPPSG 213
           G ILVFL G EEI     + KEKL   +    S K ++  + + +P+E+Q +VF  PP G
Sbjct: 576 GAILVFLPGWEEI----SKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRG 631

Query: 214 CRKVILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRA 273
           CRK++LATNIAE++VTI  + YVID G +K +SYDP   + +L     SK+ A QR+GRA
Sbjct: 632 CRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRA 691

Query: 274 GREGPGKCFRLYPEIEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRA 333
           GR   G C+ LY ++    L +  +PE+ R  +  + LQ+K L  +  +  DF++K    
Sbjct: 692 GRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVN-DFLQKLMDP 750

Query: 334 AIIKSLEQLFL----LGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLI 389
            + +S+E   +    +GALT E  L++ +G++  +LP+ P  +K + FA   NCL+  LI
Sbjct: 751 PVAQSIENALIILKDIGALTPEEELTE-LGQKFGQLPVHPRISKMIYFAILVNCLDPALI 809

Query: 390 TVAMLSVESIFYVP-----RDMLAESRIATKCFSSPEGDHITLINVYRASNDFLEKRSME 444
                  +  F +P     R   A ++           DH+  +  ++            
Sbjct: 810 LACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQC----------- 858

Query: 445 MSKPKSEKVLRKWCKENFINSRSLRHACDIHRQIKGHVQQMGL 487
               K+    +++C + FI+   ++   D+ R+++G + + G+
Sbjct: 859 WKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGV 901


>AT1G58050.1 | Symbols:  | RNA helicase family protein |
            chr1:21478590-21487839 REVERSE LENGTH=1417
          Length = 1417

 Score =  161 bits (407), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 164/322 (50%), Gaps = 11/322 (3%)

Query: 156  GDILVFLTGQEEIESVEGQIKEKLTQLPQESQKLLVAPIFAALPSEQQLRVFAPPPSGCR 215
            G ILVFL G  EI  +  ++             LL  P+ +++ S +Q +VF  PP G R
Sbjct: 883  GAILVFLPGMSEINMLLNRLAASYRFRGASGDWLL--PLHSSIASTEQKKVFLRPPKGIR 940

Query: 216  KVILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRAGR 275
            KVI+ATNIAETS+TI  + YVID G  K   Y+P K + S++    SK+ A QR GRAGR
Sbjct: 941  KVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGR 1000

Query: 276  EGPGKCFRLYPEIEFEKL-EDSTMPEIKRCNLSNVILQLKALGVDDILGF--DFIEKPSR 332
              PG CF LY    FEKL     +PE+ R  L  + L +K LG+  I  F    +E PS 
Sbjct: 1001 VKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSE 1060

Query: 333  AAIIKSLEQLFLLGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLITVA 392
            +AI  ++  L  +GAL  +  L+ P+G  +A+LP+D +  K L++   F CL  +L   A
Sbjct: 1061 SAINSAILLLHKVGALEGDEELT-PLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAA 1119

Query: 393  MLS-VESIFYVPRDMLAESRIATKCFSSPEGDHITLINVYRASNDFL----EKRSMEMSK 447
             LS  +S F   +D     R+     S        L N  R S+  L     ++ + +  
Sbjct: 1120 FLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWVRILH 1179

Query: 448  PKSEKVLRKWCKENFINSRSLR 469
             +  K    +C+  F+NS  +R
Sbjct: 1180 EQGFKAAESFCESKFLNSSVMR 1201


>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
           and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
          Length = 1299

 Score =  161 bits (407), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 211/435 (48%), Gaps = 45/435 (10%)

Query: 156 GDILVFLTGQEEIESVEGQIKEKLTQLP--QESQKLLVAPIFAALPSEQQLRVFAPPPSG 213
           G ILVFL G ++I     + +++L + P   +S K  +  + + +P+ +Q +VF  PP G
Sbjct: 552 GAILVFLPGWDDI----NKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPG 607

Query: 214 CRKVILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAMQRSGRA 273
           CRK++LATNIAE++VTI  + YVID G +K +SYDP   + +L     SK+ A QR GRA
Sbjct: 608 CRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRA 667

Query: 274 GREGPGKCFRLYPEIEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEK---- 329
           GR  PG C+ LY  +    + D  +PEIKR  +  + LQ+K L   +    DF++K    
Sbjct: 668 GRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILD-PNCKTNDFLQKLLDP 726

Query: 330 PSRAAIIKSLEQLFLLGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCLEEMLI 389
           P   +I  +L  L  +GALT +  L++ +G +   LP+ P+ +K L FA   NCL+  L 
Sbjct: 727 PVDQSIANALSILQDIGALTPQEELTE-LGEKFGHLPVHPLISKMLFFAVLVNCLDPALT 785

Query: 390 TVAMLSVESIFYVP-----RDMLAESRIATKCFSSPEGDHITLINVYRASNDFLEKRSME 444
                  +  F +P     R   A +++        + DH+ ++  +             
Sbjct: 786 LACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFEC----------- 834

Query: 445 MSKPKSEKVLRKWCKENFINSRSLRHACDIHRQIKGHVQQMGL---NLASCGDDMLQ--- 498
               K   +  ++C + F++  +++    +  Q++  +++ G+   +++SC  +      
Sbjct: 835 WKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGI 894

Query: 499 FRRCLVASFF-----LNAAIKQPDGTYRALASGQVVQIHPSSVLF-----RQKPECVIFN 548
            R  L    +     L  A      T    ASG  V++H  S  F     +     ++F+
Sbjct: 895 LRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDESLLVFD 954

Query: 549 ELLQTNNK-YVRNLT 562
           E+ + +   ++RN T
Sbjct: 955 EITRGDGGMHIRNCT 969


>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
            chr1:12099738-12104108 REVERSE LENGTH=1237
          Length = 1237

 Score =  159 bits (402), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 208/445 (46%), Gaps = 67/445 (15%)

Query: 188  KLLVAPIFAALPSEQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDPGLVKARSY 247
            KL V P++A L    QLRVF       R V++ATN+AETS+TIPGIKYV+D G VK ++Y
Sbjct: 646  KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705

Query: 248  DPGKGMESLIIVPTSKSQAMQRSGRAGREGPGKCFRLYPEIEFEKL-EDSTMPEIKRCNL 306
            D   GMES  +   S++ A QR+GRAGR GPG C+RLY    F  + E+S++PEI +  +
Sbjct: 706  DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765

Query: 307  SNVILQLKALGVDDILGFDFIEKPSRAAI------IKSLEQLFLLGALTDECHLSDPVGR 360
              VIL +K++ +  +  F F   P  +AI      +K+LE L   G LT       P+G+
Sbjct: 766  DGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLT-------PLGK 818

Query: 361  QMARLPLDPVYAKALIFASQF-----NCLEEMLITVAMLSVESIFYVPRDMLA------- 408
             M+  P+ P +++ L+   Q      N     LI    ++  +   +P  ++        
Sbjct: 819  AMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKK 878

Query: 409  -ESRIATKC----------------------FSSPEGDHITL---INVYRASND---FLE 439
             ES+ A K                       FS+P  D +T+   ++ +  S +   F E
Sbjct: 879  NESKDADKTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCE 938

Query: 440  KRSM------EMSKPKSE--KVLRKWCKENFI-NSRSLRHAC--DIHRQIKGHVQQMGLN 488
               +      EMSK K +  +++   CK +   +S S  H    D+ +  +         
Sbjct: 939  ANGLHLKTMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTSSKT 998

Query: 489  LASCGDDMLQFRRCLVASFFLNAAIKQPDGTYRALASGQVVQIHPSSVLFRQKPECVIFN 548
                 ++ L     + A +    A K     Y+A A  + V +H  S L    PE ++++
Sbjct: 999  PLLQNEEEL-LGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYS 1057

Query: 549  ELLQTNNKYVRNLTRVDYLWLTELA 573
            ELL TN  Y+   TRV   WL + A
Sbjct: 1058 ELLLTNRPYMHGATRVRPEWLVKHA 1082



 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 24/174 (13%)

Query: 1   MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNF 60
           MTDG+LLRE   D  L +YSVII+DEAHER+++TD+L+G+L  V   R     + Q    
Sbjct: 343 MTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQK--- 399

Query: 61  GNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCE----YFGGAKA 116
                     S +  G  +S        +I+PLKLI+MSA+L    F      +      
Sbjct: 400 ----------SLQSGGTVTSEC------QITPLKLILMSATLRVEDFVSGKRLFPNIPPL 443

Query: 117 VHIEGRQFPVDIFYTRRAE-TDYLDAALITIFQIHLAEGPGDILVFLTGQEEIE 169
           + +  RQ+PV I ++++ E  DY+  A   +  IH     G ILVF+TGQ E++
Sbjct: 444 IEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHKKLPQGGILVFVTGQREVD 497


>AT5G04895.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr5:1428796-1434516 FORWARD LENGTH=1161
          Length = 1161

 Score =  155 bits (392), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 253/527 (48%), Gaps = 68/527 (12%)

Query: 2   TDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLNFG 61
           T G+LLR  L D  L+  + + VDE HER ++ D L+ +LK + L R   +     L   
Sbjct: 361 TSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKEL-LPRRPDLR----LVLM 415

Query: 62  NKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAF-------CEYFGGA 114
           +  +N  L S+   G  +  +    H    P+K   +   L+   +        + +G  
Sbjct: 416 SATLNAELFSNYYGGAPTIHIPGFTH----PVKAHFLEDVLEITGYKLTSFNQVDDYGQE 471

Query: 115 KAVHIEGRQFP-------------------VDIFYTRRAET------DYLDAALITIFQI 149
           K    + +  P                    + + +R  ++      D +   LI     
Sbjct: 472 KTWKTQKQLMPRKRKNQITTLVEEALSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLC 531

Query: 150 HLA--EGPGDILVFLTGQEEIESVEGQIKEKLTQLPQESQKLLVAPIFAALPSEQQLRVF 207
           H+   E PG +LVFLTG ++I S+  QIK     L  +  ++L+     ++ + +Q  +F
Sbjct: 532 HICRKERPGAVLVFLTGWDDIRSLSDQIKAH--PLLGDPNRVLLLMCHGSMATAEQRLIF 589

Query: 208 APPPSGCRKVILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVPTSKSQAM 267
              P   RK++LATN+AE S+TI  + +V+D G  K  +YD       L+    S++ A 
Sbjct: 590 ERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASAR 649

Query: 268 QRSGRAGREGPGKCFRLYPEIEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGF--D 325
           QR GRAGR  PG+C+ LYP+  ++   +  +PE+ R  L+++ LQ+K+L V+ I  F   
Sbjct: 650 QRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSA 709

Query: 326 FIEKPSRAAIIKSLEQLFLLGALTDECHLSDPVGRQMARLPLDPVYAKALIFASQFNCLE 385
            ++ P   A+  ++  L ++GAL ++ +L+D +G+ ++ LP+DP   K LI  + F C +
Sbjct: 710 ALQAPESLAVQNAIGFLKMIGALDEKENLTD-LGKLLSILPVDPKLGKMLIMGAIFRCFD 768

Query: 386 EMLITVAMLSVESIFYVPRD-----MLAESRIATKCFSSPEGDHITLINVYRASNDFLEK 440
            +L  V+ LSV   F +P+D     + A+ R + K +S    DH+ L+  +    D    
Sbjct: 769 PILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYS----DHMALVRAFEGWKD---- 820

Query: 441 RSMEMSKPKSEKVLRKWCKENFINSRSLRHACDIHRQIKGHVQQMGL 487
                   + E    ++C  NF+++++L+    + +Q    +++ GL
Sbjct: 821 -------AEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGL 860


>AT2G47680.1 | Symbols:  | zinc finger (CCCH type) helicase family
           protein | chr2:19545828-19550871 REVERSE LENGTH=1015
          Length = 1015

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 155/353 (43%), Gaps = 93/353 (26%)

Query: 2   TDGLLLREALLDPYLS--KYSVIIVDEAHERTVHTDVLLGLLKNVQLTRSRSISDGQGLN 59
           T G+LL E +LD  L+  KY VII+DE HER+V +D++L  +K   +             
Sbjct: 120 TAGVLLDE-MLDKGLNALKYKVIILDEVHERSVESDLVLVCVKQFLM------------- 165

Query: 60  FGNKHVNNVLLSDKENGQSSSSLRKDHHKKISPLKLIIMSASLDARAFCEYF---GGAKA 116
                                        K + L++++MSA+ D   + +YF   G  + 
Sbjct: 166 -----------------------------KNNDLRVVLMSATADITRYRDYFKELGRGER 196

Query: 117 VHIEGRQFPVD-IFYTRRAETDYLD--AALITIFQIHLAEGPG----------------- 156
           V +     P     + RR    YL+  A L+ +     A  PG                 
Sbjct: 197 VEVVAIPSPDQRTIFQRRVL--YLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNL 254

Query: 157 --DILVFLTGQE-EIESVEGQIKEKLTQLPQ----ESQKLLVAPIFAA---------LPS 200
             D+++++  +E +IE      K  L  LP     E Q   + P FA+         + +
Sbjct: 255 IHDLILYIHEKEPDIE------KSILVFLPTYYSLEQQYHQLEPFFASFEVHILHRSIDT 308

Query: 201 EQQLRVFAPPPSGCRKVILATNIAETSVTIPGIKYVIDPGLVKARSYDPGKGMESLIIVP 260
           EQ L       S  RKVILATNIAE+SVTIP + YVID        +DP +  +++ +V 
Sbjct: 309 EQALAAMKICRSR-RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVW 367

Query: 261 TSKSQAMQRSGRAGREGPGKCFRLYPEIEFEKLEDSTMPEIKRCNLSNVILQL 313
            S+SQA QR GR GR   G+ +RL P   F KLE+   P I + +L   +L +
Sbjct: 368 VSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHI 420