Miyakogusa Predicted Gene

Lj1g3v4433190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4433190.1 Non Chatacterized Hit- tr|I1N9H7|I1N9H7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18667
PE,82.23,0,GTP1OBG,GTP binding domain; GTP-BINDING
PROTEIN-RELATED,NULL; MMR_HSR1,GTP binding domain; no
descri,CUFF.32351.1
         (374 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02790.1 | Symbols:  | GTP-binding family protein | chr4:1247...   484   e-137
AT2G41670.1 | Symbols:  | P-loop containing nucleoside triphosph...   106   2e-23
AT3G07050.1 | Symbols:  | GTP-binding family protein | chr3:2229...    88   8e-18
AT2G27200.1 | Symbols:  | P-loop containing nucleoside triphosph...    75   7e-14
AT1G52980.1 | Symbols:  | GTP-binding family protein | chr1:1973...    73   3e-13
AT4G10650.1 | Symbols:  | P-loop containing nucleoside triphosph...    70   3e-12

>AT4G02790.1 | Symbols:  | GTP-binding family protein |
           chr4:1247416-1249351 FORWARD LENGTH=372
          Length = 372

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 238/373 (63%), Positives = 288/373 (77%), Gaps = 4/373 (1%)

Query: 3   MSVQLSSSSGLWVPNSPHRVPSRGKPGSPSALAATPPTL-SSQPPTIQIVGLRGPSWSEN 61
           M  QL+ S      N  H V  R       A++A+ PT  SS+PP IQIVG  G   + +
Sbjct: 1   MFAQLAPSPSPSPANVSHFVHRRTFRQCTYAVSASLPTANSSRPPPIQIVG--GKDLNLD 58

Query: 62  GIANPNSNTFDGCEGENNL-WSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLRLMD 120
                +S  F     E+ + W  L++D+  WT+ALRPVQW+PGHI K EKEL+EQL+LMD
Sbjct: 59  VTRKDDSIGFKLEANEDEIDWMNLESDIRLWTRALRPVQWYPGHIMKTEKELREQLKLMD 118

Query: 121 VVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDMISTEDRNAWAEYFTRNGTKVVFS 180
           VVIEVRD RIP+STTHP+MD WLGNRKRILVLNREDMIS +DRN WA YF + G KV+F+
Sbjct: 119 VVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRNDWARYFAKQGIKVIFT 178

Query: 181 NGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRM 240
           NG+LGMG MKLGRLAK LA +VN KRR KGLLPR+VRAGI+GYPNVGKSSLINRLLKR++
Sbjct: 179 NGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVRAGIIGYPNVGKSSLINRLLKRKI 238

Query: 241 CPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQSSAIKLAICDDIGERSYDVTDV 300
           C AAPRPGVTRE++W++ GKDL+LLDSPG+LPMRI DQ++AIKLAICDDIGE++YD TDV
Sbjct: 239 CAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDDQAAAIKLAICDDIGEKAYDFTDV 298

Query: 301 AAVLVQMLTKLPAVGGDALRKRYKINVDSQCGKTFVEKLALQLFNGDVHQASFRVLSDFR 360
           A +LVQML ++P VG  AL  RYKI ++  CGK FV+ L L LF GD HQA+FR+L+DFR
Sbjct: 299 AGILVQMLARIPEVGAKALYNRYKIQLEGNCGKKFVKTLGLNLFGGDSHQAAFRILTDFR 358

Query: 361 KGKFGWTALERPP 373
           KGKFG+ +LERPP
Sbjct: 359 KGKFGYVSLERPP 371


>AT2G41670.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:17374118-17376177
           FORWARD LENGTH=386
          Length = 386

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 28/228 (12%)

Query: 98  VQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDM 157
           + WFPGH+A A + ++ +L+L D+VIEVRD RIP+S+ +  +   +  ++RI+ LN++D+
Sbjct: 26  INWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQSQMSAKRRIIALNKKDL 85

Query: 158 ISTEDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPR--A 215
            +    N W  +F  +    +  N       MKL  L         V+ + K ++ R   
Sbjct: 86  ANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDL---------VELKLKEVIAREPT 136

Query: 216 VRAGIVGYPNVGKSSLINRL-------------LKRRMCPAAPRPGVTRELRWIRFGK-- 260
           +   +VG PNVGKS+LIN +             LKR      P PGVT+++   +     
Sbjct: 137 LLVMVVGVPNVGKSALINSIHQIAAARFPVQERLKR--ATVGPLPGVTQDIAGFKIAHRP 194

Query: 261 DLELLDSPGILPMRISDQSSAIKLAICDDIGERSYDVTDVAAVLVQML 308
            + +LDSPG+L   I D  + +KLA+   + +       +A   + +L
Sbjct: 195 SIYVLDSPGVLVPSIPDIETGLKLALSGSVKDSVVGEERIAQYFLAIL 242


>AT3G07050.1 | Symbols:  | GTP-binding family protein |
           chr3:2229602-2232279 REVERSE LENGTH=582
          Length = 582

 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 36/291 (12%)

Query: 110 KELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLG----NRKRILVLNREDMISTEDRNA 165
           KEL + + L DV++EV D R P+ T    M+  +     N+  +L+LN+ D++  E    
Sbjct: 128 KELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEK 187

Query: 166 WAEYFTRNGTKVVF------SNGQLGMGTMKLGR------LAKELAANVNVK----RRAK 209
           W  Y       V F          LG  + K  +       +  L A+  +K        
Sbjct: 188 WLMYLREEFPAVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRS 247

Query: 210 GLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPG 269
             L +++  GI+G PNVGKSSLIN L +  +      PG+TR L+ +   K+++LLD PG
Sbjct: 248 HELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCPG 307

Query: 270 ILPMRISDQSSAIKLAICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKINVDS 329
           ++ ++ S   ++I L  C    +R   + D  + + ++L   P    D L   YKI    
Sbjct: 308 VVMLKSSGNDASIALRNC----KRIEKLDDPVSPVKEILKLCPK---DMLVTLYKIP-SF 359

Query: 330 QCGKTFVEKLAL---QLFNG---DVHQASFRVLSDFRKGKFGWTALERPPR 374
           +    F+ K+A    +L  G   D+  A+  VL D+ +GK  +  +  PP+
Sbjct: 360 EAVDDFLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYTM--PPK 408


>AT2G27200.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr2:11625449-11627959
           FORWARD LENGTH=537
          Length = 537

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 42/197 (21%)

Query: 116 LRLMDVVIEVRDGRIPMSTTHPQMDLWLG----NRKRILVLNREDMISTEDRNAWAEYFT 171
           L   D+++ V D R P+    P ++ +      ++K +L++N+ D++ +  R  WAEYF+
Sbjct: 165 LERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYVREKWAEYFS 224

Query: 172 RNGTKVVFSNGQLGMGTMK------------------------------LGRLAKELAAN 201
           RN    VF + +    T++                              L RL  E A  
Sbjct: 225 RNNILFVFWSAKAATATLEGKPLKEQWRAPDTTQKTDNPAVKVYGRDDLLDRLKLE-ALE 283

Query: 202 VNVKRRAKGLLPRA-------VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELR 254
           +   R+++G+   +       V  G VGYPNVGKSS IN L+ ++       PG T+  +
Sbjct: 284 IVKMRKSRGVSATSTESHCEQVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQ 343

Query: 255 WIRFGKDLELLDSPGIL 271
            +   +DL L D PG++
Sbjct: 344 TLIISEDLMLCDCPGLV 360


>AT1G52980.1 | Symbols:  | GTP-binding family protein |
           chr1:19737493-19740201 FORWARD LENGTH=576
          Length = 576

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 42/272 (15%)

Query: 111 ELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKR----ILVLNREDMISTEDRNAW 166
           EL + +   DV+++V D R P  T    ++  L    +    IL+LN+ D++       W
Sbjct: 208 ELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMILLLNKCDLVPAWATKGW 267

Query: 167 AEYFTRNGTKVVFS---NGQLGMGTM-----KLGRLAKELAANVNVKRRAKGLLPRAVRA 218
               ++    + F    N   G G++     +  RL  +                +A+  
Sbjct: 268 LRVLSKEYPTLAFHASVNKSFGKGSLLSVLRQFARLKSD---------------KQAISV 312

Query: 219 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQ 278
           G VGYPNVGKSS+IN L  + +C  AP PG T+  ++I   K + L+D PG++      +
Sbjct: 313 GFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQSRDTE 372

Query: 279 SSAIKLAICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKINVDSQCGKTFVEK 338
           +  +   +      R  ++ D +  + ++L +   V  + L++ YKI  D +    F+ +
Sbjct: 373 TDIVLKGVV-----RVTNLEDASEHIGEVLRR---VKKEHLQRAYKIK-DWEDDHDFLLQ 423

Query: 339 LAL---QLFNG---DVHQASFRVLSDFRKGKF 364
           L     +L  G   D+   +  +L D+++G+ 
Sbjct: 424 LCKSSGKLLKGGEPDLMTGAKMILHDWQRGRI 455


>AT4G10650.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:6574472-6576231
           REVERSE LENGTH=377
          Length = 377

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 22/210 (10%)

Query: 99  QWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLG-NRKRILVLNREDM 157
           +W+  H+A A + + E++ L+D V+E+RD RIP+S+ +  +  +     KRI+VLN+ ++
Sbjct: 27  RWYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKRIIVLNKMEL 86

Query: 158 ISTEDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVR 217
               +     +YF          N         + +L   L + V    +A G       
Sbjct: 87  ADPLELKKCIDYFEERNYLSYAVNSH---NKDCVKQLLNFLQSQVRELHKA-GHSGHTTT 142

Query: 218 AGIVGYPNVGKSSLINRLL-----------KRRMCPAAPRPGVTRELRWIRFGK--DLEL 264
             ++G PNVGKS+L N L            K +    + +PG T+++  ++ G   ++ +
Sbjct: 143 MMLLGIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDTKDIMSLKIGSHPNVYV 202

Query: 265 LDSPGILPMRISDQSSAIKLAIC----DDI 290
           LD+PGI P  + D     KLA+     DDI
Sbjct: 203 LDTPGIFPPNLYDAEICAKLALTGAIPDDI 232