Miyakogusa Predicted Gene

Lj1g3v4433180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4433180.1 Non Chatacterized Hit- tr|I3SVB5|I3SVB5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.53,0,Cyclin-like,Cyclin-like; seg,NULL; no
description,Cyclin-like; SUBFAMILY NOT NAMED,NULL;
UNCHARACTER,CUFF.32349.1
         (214 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63120.1 | Symbols: CYCP1;1 | cyclin p1;1 | chr3:23323143-233...   194   4e-50
AT3G05327.1 | Symbols:  | Cyclin family protein | chr3:1517581-1...   169   9e-43
AT2G44740.1 | Symbols: CYCP4;1 | cyclin p4;1 | chr2:18442287-184...   162   1e-40
AT5G61650.1 | Symbols: CYCP4;2, CYCP4 | CYCLIN P4;2 | chr5:24778...   147   3e-36
AT5G07450.1 | Symbols: CYCP4;3 | cyclin p4;3 | chr5:2358418-2359...   147   4e-36
AT3G21870.1 | Symbols: CYCP2;1 | cyclin p2;1 | chr3:7703927-7704...   147   6e-36
AT2G45080.1 | Symbols: cycp3;1 | cyclin p3;1 | chr2:18591688-185...   136   1e-32
AT3G60550.1 | Symbols: CYCP3;2 | cyclin p3;2 | chr3:22379846-223...   130   5e-31

>AT3G63120.1 | Symbols: CYCP1;1 | cyclin p1;1 |
           chr3:23323143-23323893 REVERSE LENGTH=221
          Length = 221

 Score =  194 bits (492), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 99/173 (57%), Positives = 122/173 (70%), Gaps = 9/173 (5%)

Query: 48  NEMLLESNHIKDVVTVFHGLRAPALSVHKYIDRIFKYSGCSPSCFVLAHIYVDRFLQHTE 107
           +++LL S    D VTVF G   P +S+  Y+DRIFKYS CSPSCFV+AHIY+D FL  T 
Sbjct: 52  DKILLGS---PDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTR 108

Query: 108 IKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGGVSTSELNRLEMSFLFGIDFRLQ 167
             L  LNVHRL+IT++MLAAK  DD +FNNAYYA+VGGV+T ELNRLEM  LF +DF+LQ
Sbjct: 109 ALLKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQ 168

Query: 168 VSVDKFQRYCWQLEKESADILQIERPM-QACRI-KESWD----DSTCASTIAR 214
           V    F  +C QLEK++ D  QIE P+ +ACR  KE+W     DS C+ T AR
Sbjct: 169 VDPQTFHTHCCQLEKQNRDGFQIEWPIKEACRANKETWQKRTPDSLCSQTTAR 221


>AT3G05327.1 | Symbols:  | Cyclin family protein |
           chr3:1517581-1518399 REVERSE LENGTH=212
          Length = 212

 Score =  169 bits (429), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 114/160 (71%), Gaps = 6/160 (3%)

Query: 31  PRVXXXXXXXXERSVQRNEMLLESNHIK-DVVTVFHGLRAPALSVHKYIDRIFKYSGCSP 89
           PRV        E+ +Q+N+    + H K D +T+FHG +AP+LS+++Y +RI +Y+ CSP
Sbjct: 31  PRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSIYRYTERIHRYAQCSP 90

Query: 90  SCFVLAHIYVDRFLQHTEI-----KLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVG 144
            CFV A  Y+ R+LQ  E      +LTSLNVHRLLITS+++AAKF++   +NNAYYAK+G
Sbjct: 91  VCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKFLERQCYNNAYYAKIG 150

Query: 145 GVSTSELNRLEMSFLFGIDFRLQVSVDKFQRYCWQLEKES 184
           GVST E+NRLE +FL  +DFRL ++ + F+++C  L+KE+
Sbjct: 151 GVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKET 190


>AT2G44740.1 | Symbols: CYCP4;1 | cyclin p4;1 |
           chr2:18442287-18443304 REVERSE LENGTH=202
          Length = 202

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 73/143 (51%), Positives = 102/143 (71%), Gaps = 1/143 (0%)

Query: 42  ERSVQRNEMLLESNHIKDVVTVFHGLRAPALSVHKYIDRIFKYSGCSPSCFVLAHIYVDR 101
           ER  + N++          V+VFHGL  P +++  Y++RIFKY+ CSPSCFV+A++Y+DR
Sbjct: 22  ERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSCFVVAYVYLDR 81

Query: 102 FL-QHTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGGVSTSELNRLEMSFLF 160
           F  +   + + S NVHRLLITS+M+AAKF+DD ++NNAYYAKVGG+ST E+N LE+ FLF
Sbjct: 82  FTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKEMNFLELDFLF 141

Query: 161 GIDFRLQVSVDKFQRYCWQLEKE 183
           G+ F L V+ + F  Y   L+KE
Sbjct: 142 GLGFELNVTPNTFNAYFSYLQKE 164


>AT5G61650.1 | Symbols: CYCP4;2, CYCP4 | CYCLIN P4;2 |
           chr5:24778265-24779019 FORWARD LENGTH=219
          Length = 219

 Score =  147 bits (372), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 108/162 (66%), Gaps = 5/162 (3%)

Query: 31  PRVXXXXXXXXERSVQRNEMLLESNHIKDVVTVFHGLRAPALSVHKYIDRIFKYSGCSPS 90
           P V        +R  + N+ L +    K   + F G+  P++S+  Y++RIF+Y+ CS S
Sbjct: 23  PSVLTAMSYLLQRVSETNDNLSQ----KQKPSSFTGVTKPSISIRSYLERIFEYANCSYS 78

Query: 91  CFVLAHIYVDRFLQHTE-IKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGGVSTS 149
           C+++A+IY+DRF++    + + S NVHRL+ITS++++AKFMDD  +NN YYAKVGG+S  
Sbjct: 79  CYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGISRE 138

Query: 150 ELNRLEMSFLFGIDFRLQVSVDKFQRYCWQLEKESADILQIE 191
           E+N LE+ FLFGI F L V+V  F  YC  L++E A +++++
Sbjct: 139 EMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMK 180


>AT5G07450.1 | Symbols: CYCP4;3 | cyclin p4;3 | chr5:2358418-2359253
           REVERSE LENGTH=216
          Length = 216

 Score =  147 bits (372), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 104/154 (67%), Gaps = 1/154 (0%)

Query: 31  PRVXXXXXXXXERSVQRNEMLLESNHIKDVVTVFHGLRAPALSVHKYIDRIFKYSGCSPS 90
           P V        +R  + N+ L         ++ F+ +  P++S+  Y++RIFKY+ CS S
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 91  CFVLAHIYVDRFLQHTEI-KLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGGVSTS 149
           C+++A+IY+DRF+Q   +  + S NVHRL+ITS++++AKFMDD  +NNA+YAKVGG++T 
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 150 ELNRLEMSFLFGIDFRLQVSVDKFQRYCWQLEKE 183
           E+N LE+ FLFGI F+L V++  +  YC  L++E
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174


>AT3G21870.1 | Symbols: CYCP2;1 | cyclin p2;1 | chr3:7703927-7704813
           REVERSE LENGTH=210
          Length = 210

 Score =  147 bits (371), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 115/172 (66%), Gaps = 7/172 (4%)

Query: 31  PRVXXXXXXXXERSVQRNEMLL-ESNHIKDVVTVFHGLRAPALSVHKYIDRIFKYSGCSP 89
           PRV        E+ V RNE L  ++      +  FHG+RAP++S+ KY++RI+KY+ CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 90  SCFVLAHIYVDRFL-QHTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGGVST 148
           +CFV+ ++Y+DR   +H    + SLNVHRLL+T +M+AAK +DD  +NN +YA+VGGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 149 SELNRLEMSFLFGIDFRLQVSVDKFQRYCWQLEKE-----SADILQIERPMQ 195
           ++LN++E+  LF +DFR+ VS   F+ YC+ LEKE     +   L+  +PMQ
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLNDAVSSLKDIQPMQ 196


>AT2G45080.1 | Symbols: cycp3;1 | cyclin p3;1 |
           chr2:18591688-18592443 FORWARD LENGTH=222
          Length = 222

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 117/198 (59%), Gaps = 6/198 (3%)

Query: 1   MGTLALETEDVSSDIYXXXXXXXXXXXXXXPRVXXXXXXXXERSVQRNEMLLESNHIKDV 60
           M +LA+    + SD+Y              P V        ER++ RNE +  S      
Sbjct: 1   MDSLAISPRKLRSDLYSYSYQDDSNTV---PLVISVLSSLIERTLARNERISRSYGGFGK 57

Query: 61  VTVFHGLRAPALSVHKYIDRIFKYSGCSPSCFVLAHIYVDRFLQHTE-IKLTSLNVHRLL 119
             VF     P +++  Y++RIF+Y+   PS +V+A++Y+DRF Q+ +  +++  NVHRLL
Sbjct: 58  TRVFDCREIPDMTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLL 117

Query: 120 ITSIMLAAKFMDDAFFNNAYYAKVGGVSTSELNRLEMSFLFGIDFRLQVSVDKFQRYCWQ 179
           IT+IM+A+K+++D  + N+Y+AKVGG+ T +LN LE+ FLF + F+L V+V  F+ YC  
Sbjct: 118 ITTIMIASKYVEDMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCH 177

Query: 180 LEKESA--DILQIERPMQ 195
           LE+E +     QIE+ ++
Sbjct: 178 LEREVSIGGGYQIEKALR 195


>AT3G60550.1 | Symbols: CYCP3;2 | cyclin p3;2 |
           chr3:22379846-22380641 FORWARD LENGTH=230
          Length = 230

 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 107/172 (62%), Gaps = 7/172 (4%)

Query: 31  PRVXXXXXXXXERSVQRNEML----LESNHIKDVVTVFHGLRAPALSVHKYIDRIFKYSG 86
           P V        +R++ RNE +    L S+       +F     P +++  Y+ RIF+Y+ 
Sbjct: 30  PLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQIFDCREIPDMTIQSYLGRIFRYTK 89

Query: 87  CSPSCFVLAHIYVDRFLQ-HTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGG 145
             PS +V+A++Y+DRF Q +   +++  NVHRLLIT+IM+A+K+++D  + N+Y+AKVGG
Sbjct: 90  AGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLITTIMIASKYVEDLNYRNSYFAKVGG 149

Query: 146 VSTSELNRLEMSFLFGIDFRLQVSVDKFQRYCWQLEKES--ADILQIERPMQ 195
           + T +LN+LE+ FLF + F+L V+V  F+ YC  LE+E       QIE+ ++
Sbjct: 150 LETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHLEREVSFGGGYQIEKALR 201