Miyakogusa Predicted Gene

Lj1g3v4431080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4431080.1 Non Chatacterized Hit- tr|I1JNT8|I1JNT8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.09,0,PROTEIN
TRANSLOCASE SECY SUBUNIT,NULL; SECY/SEC61-ALPHA FAMILY
MEMBER,SecY/SEC61-alpha family; SECYT,CUFF.32337.1
         (563 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31530.1 | Symbols: EMB2289, SCY2 | SecY protein transport fa...   778   0.0  
AT2G18710.1 | Symbols: SCY1 | SECY homolog 1 | chr2:8112231-8114...   127   3e-29

>AT2G31530.1 | Symbols: EMB2289, SCY2 | SecY protein transport
           family protein | chr2:13427060-13430308 FORWARD
           LENGTH=575
          Length = 575

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/512 (74%), Positives = 436/512 (85%), Gaps = 7/512 (1%)

Query: 58  LSHRRTLSVNFFDRLRSDSVEAESPNEE---VVLLPSRGGD---GGEAVVPTGDLQLKPR 111
           +  R++ S+N+ D+ R DS+ +E  + +   V ++P    D      + V       +P+
Sbjct: 65  MKERKSFSINYSDKFRDDSMSSEEMHTDALDVEIIPPDSQDIRNSQNSAVSNTLQDDRPK 124

Query: 112 MFRNRFLNFVRFGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQ 171
            FRNRFL+FVR  SV+N AAE FFKSEIRRRLFVTAVL+V+SRVGYFIPLPGFDRRLIPQ
Sbjct: 125 SFRNRFLDFVRISSVLNTAAERFFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRLIPQ 184

Query: 172 DYMSFVSGSSVDELGDFSSELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDG 231
           DY+SFVSGS V+ELG+F +E+KLSLFQLG+SPQIIASIIMQVLCHV+PSLVKLRKEGLDG
Sbjct: 185 DYLSFVSGS-VEELGEFGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRKEGLDG 243

Query: 232 QEKIKSYIWWMSFGFAILEALIVSCYSLQYSIYAASHRVKHVMVTSSLLVCGAMTTTWIC 291
            EKIKSYIWW+SF FAI+EAL+V+  SLQYS++AA+ +VKHVM+TSSLLVCGAMT TW+C
Sbjct: 244 HEKIKSYIWWLSFFFAIVEALVVAYTSLQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLC 303

Query: 292 DTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSSVSWLPYVLAVLGIFTTVTMWA 351
           DTISESGFG GSSLIICVGILTGY ETLHKML Q+S S  +WLPY+L +LGIFT VTM+A
Sbjct: 304 DTISESGFGHGSSLIICVGILTGYTETLHKMLNQISGSFSNWLPYLLGLLGIFTVVTMFA 363

Query: 352 VVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSI 411
           VVVTEGCRK+KLQYYGFKLASA+RE SPITEVEPYIPFNINPAGMQPVLTT+YLLAFPSI
Sbjct: 364 VVVTEGCRKIKLQYYGFKLASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSI 423

Query: 412 VAGLLQSPFWEHVKEMLNPETSIGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKM 471
           +A +L SPF  ++KE+LNPE+++GA PWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKM
Sbjct: 424 LASILGSPFLLNMKEILNPESTVGAPPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKM 483

Query: 472 GARIPNIKPGKATIEYLSKVQASTRFWGGXXXXXXXXXXXXXDHYLRRINAGFAIGFTSV 531
           GARIPNIKPGKATIEYL+K+QASTRFWGG             DHYLR IN GF+IGFTSV
Sbjct: 484 GARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLRSINQGFSIGFTSV 543

Query: 532 LIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 563
           LIIVGSIIELRRSY AYNVMPSLS AL+RYGV
Sbjct: 544 LIIVGSIIELRRSYHAYNVMPSLSKALKRYGV 575


>AT2G18710.1 | Symbols: SCY1 | SECY homolog 1 | chr2:8112231-8114452
           REVERSE LENGTH=551
          Length = 551

 Score =  127 bits (318), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 193/423 (45%), Gaps = 33/423 (7%)

Query: 134 FFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYMSFVSGSSVDELGDFSSEL- 192
           FFK  +  +       + +SR+G +IPL G +R     +       S +  L  FS    
Sbjct: 133 FFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGN---LDQNSILSTLDTFSGGGI 189

Query: 193 -KLSLFQLGISPQIIASIIMQVLCHVVPSLVKL-RKEGLDGQEKIKSYIWWMSFGFAILE 250
            +L +  LGI P I A I+ Q+L  V P L  L +KEG  G++KI  Y  + S GFAI++
Sbjct: 190 GRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKILQYTRYASVGFAIVQ 249

Query: 251 ALIVSCYSLQYSIYAASHRVKHVMVTSSLLVCGAMTTTWICDTISESGFGQGSSLIICVG 310
           A+    Y      Y      + V+ + +LL  G++ TT+I + IS+   G G+SL+I   
Sbjct: 250 AIGQVFY---LRPYVNDFSTEWVVSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFTS 306

Query: 311 ILT----GYMETLHKMLTQLSVSSVSWL--PYVLAVLGIFTTVTMWAVVVTEGCRKVKLQ 364
           I++     +  T  + L + + + +  +   ++L VLGI        V V E  RK+ L 
Sbjct: 307 IISYLPASFGRTTAEALQEGNYTGLGTIVVSFLLLVLGI--------VYVQEAERKIPLN 358

Query: 365 YYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVAGLLQSPFWEHV 424
           Y     AS    ++   +   Y+PF +N AG+ P++ ++  LA P+ +A        ++V
Sbjct: 359 Y-----ASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALPATLARFTGISALKNV 413

Query: 425 KEMLNPETSIGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKAT 484
              L P  S      +   + AFF + +    +   P ++++ L + GA IP ++PGK+T
Sbjct: 414 AFALTPGGSFYLPTNIL--LIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGKST 469

Query: 485 IEYLSKVQASTRFWGGXXXXXXXXXXXXXDHYLRRINAGFAIGFTSVLIIVGSIIELRRS 544
             ++  V       G              +  +  + A      TSVLI+VG   +  R 
Sbjct: 470 ALFIKTVLGRISVLGSAFLAVLAAGPAVVEQ-ITHLTAFRGFAGTSVLILVGCATDTARK 528

Query: 545 YQA 547
            QA
Sbjct: 529 VQA 531