Miyakogusa Predicted Gene
- Lj1g3v4419940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4419940.1 tr|A9TAZ3|A9TAZ3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_142792,44.29,3e-19,seg,NULL; UNCHARACTERIZED,NULL;
ANCIENT CONSERVED DOMAIN
PROTEIN-RELATED,NULL,NODE_35927_length_843_cov_30.507711.path2.1
(162 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14230.1 | Symbols: | CBS domain-containing protein with a d... 122 1e-28
AT4G14240.1 | Symbols: | CBS domain-containing protein with a d... 114 4e-26
AT1G03270.1 | Symbols: | CBS domain-containing protein with a d... 112 1e-25
AT4G14240.2 | Symbols: | CBS domain-containing protein with a d... 110 3e-25
AT5G52790.1 | Symbols: | CBS domain-containing protein with a d... 84 4e-17
AT1G47330.1 | Symbols: | CBS domain-containing protein with a d... 80 7e-16
AT2G14520.1 | Symbols: | CBS domain-containing protein with a d... 71 3e-13
AT4G33700.1 | Symbols: | CBS domain-containing protein with a d... 67 4e-12
>AT4G14230.1 | Symbols: | CBS domain-containing protein with a
domain of unknown function (DUF21) |
chr4:8200850-8203130 REVERSE LENGTH=495
Length = 495
Score = 122 bits (306), Expect = 1e-28, Method: Composition-based stats.
Identities = 72/134 (53%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLYDILNEFQKGSSHMAAVVKV +SK + S + ++S+LT PLL +
Sbjct: 307 MPLYDILNEFQKGSSHMAAVVKVKGKSKGHPSTLHEENSGESNVSSNNSELTAPLLLKRE 366
Query: 61 EKSDNV-ADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEELLQ 119
D+V I KA + Q + G + EDG+VIGIITLEDVFEELLQ
Sbjct: 367 GNHDSVIVRIDKA------NGQSFISEAGRQGFSHTSEEIEDGDVIGIITLEDVFEELLQ 420
Query: 120 EEIVDETDEYIDVH 133
EEIVDETDEYIDVH
Sbjct: 421 EEIVDETDEYIDVH 434
>AT4G14240.1 | Symbols: | CBS domain-containing protein with a
domain of unknown function (DUF21) |
chr4:8204712-8207273 REVERSE LENGTH=494
Length = 494
Score = 114 bits (284), Expect = 4e-26, Method: Composition-based stats.
Identities = 77/136 (56%), Positives = 85/136 (62%), Gaps = 13/136 (9%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHS--SKLTVPLLAR 58
MPLYDILNEFQKGSSHMAAVVKV +SK P E+ T S S LT PLL +
Sbjct: 308 MPLYDILNEFQKGSSHMAAVVKVKGKSKVPPSTLL------EEHTDESNDSDLTAPLLLK 361
Query: 59 SSEKSDNV-ADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEEL 117
DNV I KA + Q N + +G + EDGEVIGIITLEDVFEEL
Sbjct: 362 REGNHDNVIVTIDKA----NGQSFFQNNESGPHGFSHTSEAIEDGEVIGIITLEDVFEEL 417
Query: 118 LQEEIVDETDEYIDVH 133
LQEEIVDETDEY+DVH
Sbjct: 418 LQEEIVDETDEYVDVH 433
>AT1G03270.1 | Symbols: | CBS domain-containing protein with a
domain of unknown function (DUF21) | chr1:799191-802436
FORWARD LENGTH=499
Length = 499
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 90/137 (65%), Gaps = 7/137 (5%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESK-NPQEACYMGKS--KNEKFTKHSSKLTVPLLA 57
MPLYDILNEFQKGSSHMAAVVKV + K N + G++ +N KF + SS LT PLL
Sbjct: 306 MPLYDILNEFQKGSSHMAAVVKVKDKDKKNNMQLLSNGETPKENMKFYQ-SSNLTAPLLK 364
Query: 58 RSSEKSDNVADIGKAPPN-HDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEE 116
E D V DI K P + + + Q+N T T + +ED EVIGIITLEDVFEE
Sbjct: 365 H--ESHDVVVDIDKVPKHVKNRGRNFQQNGTVTRDLPCLLEDNEDAEVIGIITLEDVFEE 422
Query: 117 LLQEEIVDETDEYIDVH 133
LLQ EIVDETD YIDVH
Sbjct: 423 LLQAEIVDETDVYIDVH 439
>AT4G14240.2 | Symbols: | CBS domain-containing protein with a
domain of unknown function (DUF21) |
chr4:8204712-8207273 REVERSE LENGTH=485
Length = 485
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 85/136 (62%), Gaps = 13/136 (9%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHS--SKLTVPLLAR 58
MPLYDILNEFQKGSSHMAAVVKV +SK P E+ T S S LT PLL +
Sbjct: 299 MPLYDILNEFQKGSSHMAAVVKVKGKSKVPPSTLL------EEHTDESNDSDLTAPLLLK 352
Query: 59 SSEKSDNV-ADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEEL 117
DNV I KA + Q N + +G + EDGEVIGIITLEDVFEEL
Sbjct: 353 REGNHDNVIVTIDKA----NGQSFFQNNESGPHGFSHTSEAIEDGEVIGIITLEDVFEEL 408
Query: 118 LQEEIVDETDEYIDVH 133
LQEEIVDETDEY+DVH
Sbjct: 409 LQEEIVDETDEYVDVH 424
>AT5G52790.1 | Symbols: | CBS domain-containing protein with a
domain of unknown function (DUF21) |
chr5:21391740-21394327 REVERSE LENGTH=500
Length = 500
Score = 84.0 bits (206), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 71/140 (50%), Gaps = 39/140 (27%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
+PLYDILN FQ G SHMAAVV TK+ + P+
Sbjct: 287 LPLYDILNIFQTGRSHMAAVVG----------------------TKNHTNTNTPV----H 320
Query: 61 EKSDNVADIGKAPPNHDAD-----KQCQKNSTATNGDHRFHDY--DEDGEVIGIITLEDV 113
EKS N PN DA+ + T+ R+ D DED EVIGIITLEDV
Sbjct: 321 EKSIN------GSPNKDANVFLSIPALNSSETSHQSPIRYIDSISDEDEEVIGIITLEDV 374
Query: 114 FEELLQEEIVDETDEYIDVH 133
EEL+QEEI DETD+Y+++H
Sbjct: 375 MEELIQEEIYDETDQYVELH 394
>AT1G47330.1 | Symbols: | CBS domain-containing protein with a
domain of unknown function (DUF21) |
chr1:17351149-17353739 FORWARD LENGTH=527
Length = 527
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 78/160 (48%), Gaps = 29/160 (18%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMG-------KSKNEKFTKHSSKLTV 53
MPLYDILNEFQKG SH+A V K E + E G K+K+E F K
Sbjct: 286 MPLYDILNEFQKGHSHIAVVYKDLDEQEQSPETSENGIERRKNKKTKDELFKDSCRKPKA 345
Query: 54 PLLARSSEKSDNVADIGKAPPNHDADKQCQKNSTATN-------GDHR------------ 94
SEK + G A + + Q+ S T+ HR
Sbjct: 346 QF--EVSEKEVFKIETGDAKSGKSENGEEQQGSGKTSLLAAPAKKRHRGCSFCILDIENT 403
Query: 95 -FHDYDEDGEVIGIITLEDVFEELLQEEIVDETDEYIDVH 133
D+ + EV+G+IT+EDV EELLQEEI+DETDEY+++H
Sbjct: 404 PIPDFPTNEEVVGVITMEDVIEELLQEEILDETDEYVNIH 443
>AT2G14520.1 | Symbols: | CBS domain-containing protein with a
domain of unknown function (DUF21) |
chr2:6182362-6184648 REVERSE LENGTH=423
Length = 423
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 74/155 (47%), Gaps = 43/155 (27%)
Query: 1 MPLYDILNEFQKGSSHMAAVVK------------VARESKN-----------PQEACYMG 37
+PLYDILNEFQKG SHMA VV+ A E+ N PQE
Sbjct: 286 LPLYDILNEFQKGHSHMAVVVRQCDKIHPLQSNDAANETVNEVRVDVDYERSPQETKLKR 345
Query: 38 KSKNEKFTKHSSKLTVPLLARSSEKS-DNVADIGKAPPNHDADKQCQKNSTATNGDHRFH 96
+ +K+ ++ L +RS S DN ADI Q N +H
Sbjct: 346 RRSLQKWKSFPNRAN-SLGSRSKRWSKDNDADI------------LQLN------EHPLP 386
Query: 97 DYDEDGEVIGIITLEDVFEELLQEEIVDETDEYID 131
DE+ + +GIIT+EDV EELLQEEI DETD + +
Sbjct: 387 KLDEEEDAVGIITMEDVIEELLQEEIFDETDHHFE 421
>AT4G33700.1 | Symbols: | CBS domain-containing protein with a
domain of unknown function (DUF21) |
chr4:16176547-16179188 REVERSE LENGTH=424
Length = 424
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVA-----RESKNPQEACYMGKSKNEKFTKHSSKLTVP- 54
+PLYDILNEFQKG SHMA VV+ SKN G K + S P
Sbjct: 286 LPLYDILNEFQKGLSHMAVVVRQCDKIHPLPSKN-------GSVKEARVDVDSEGTPTPQ 338
Query: 55 --LL--ARSSEKSDNVADIGKAPPNHDADKQCQKNSTA----TNGDHRFHDYDEDGEVIG 106
+L RS +K + + + K+ K++ A NG+ E+ E +G
Sbjct: 339 ERMLRTKRSLQKWKSFPNRASSFKGGSKSKKWSKDNDADILQLNGNP-LPKLAEEEEAVG 397
Query: 107 IITLEDVFEELLQEEIVDETDEYID 131
IIT+EDV EELLQEEI DETD + +
Sbjct: 398 IITMEDVIEELLQEEIFDETDHHFE 422