Miyakogusa Predicted Gene

Lj1g3v4407600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4407600.1 Non Chatacterized Hit- tr|Q5K248|Q5K248_GUITH
Putative uncharacterized protein (Fragment)
OS=Guillar,34.86,0.00000002,seg,NULL,CUFF.32318.1
         (228 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G48070.2 | Symbols: RPH1 | resistance to phytophthora 1 | chr...   210   7e-55
AT2G48070.1 | Symbols: RPH1 | resistance to phytophthora 1 | chr...   210   7e-55
AT2G48070.3 | Symbols: RPH1 | resistance to phytophthora 1 | chr...   204   3e-53

>AT2G48070.2 | Symbols: RPH1 | resistance to phytophthora 1 |
           chr2:19662863-19663773 FORWARD LENGTH=197
          Length = 197

 Score =  210 bits (534), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 101/142 (71%), Positives = 111/142 (78%)

Query: 87  LDKELKKVAQKTAATFAPRASTASKNPAVPGSTLYTVFEVQGYVSMLLGGALSFNLIFPS 146
           L K+LKKV  KTAATFAPRASTASKNPA+PG+TLY VFEVQGY SM LGG LSFNL+FPS
Sbjct: 56  LGKDLKKVVNKTAATFAPRASTASKNPALPGTTLYKVFEVQGYASMFLGGVLSFNLLFPS 115

Query: 147 NEPDLWRLMGMWSVWMFTIPSLRARDCSKNEKEAXXXXXXXXXXXXXXXXXXXKSFAVVW 206
           +EPDLWRLMGMWS+WMFTIPSLRARDC   EKEA                   KSFA+VW
Sbjct: 116 SEPDLWRLMGMWSIWMFTIPSLRARDCPSKEKEALNYLFLIVPLLNVAIPFFWKSFALVW 175

Query: 207 SADIVAFFGMYAWKLGWLQKTD 228
           SAD VAFF MYAWKLGWL++T+
Sbjct: 176 SADTVAFFAMYAWKLGWLERTE 197


>AT2G48070.1 | Symbols: RPH1 | resistance to phytophthora 1 |
           chr2:19662863-19663773 FORWARD LENGTH=197
          Length = 197

 Score =  210 bits (534), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 101/142 (71%), Positives = 111/142 (78%)

Query: 87  LDKELKKVAQKTAATFAPRASTASKNPAVPGSTLYTVFEVQGYVSMLLGGALSFNLIFPS 146
           L K+LKKV  KTAATFAPRASTASKNPA+PG+TLY VFEVQGY SM LGG LSFNL+FPS
Sbjct: 56  LGKDLKKVVNKTAATFAPRASTASKNPALPGTTLYKVFEVQGYASMFLGGVLSFNLLFPS 115

Query: 147 NEPDLWRLMGMWSVWMFTIPSLRARDCSKNEKEAXXXXXXXXXXXXXXXXXXXKSFAVVW 206
           +EPDLWRLMGMWS+WMFTIPSLRARDC   EKEA                   KSFA+VW
Sbjct: 116 SEPDLWRLMGMWSIWMFTIPSLRARDCPSKEKEALNYLFLIVPLLNVAIPFFWKSFALVW 175

Query: 207 SADIVAFFGMYAWKLGWLQKTD 228
           SAD VAFF MYAWKLGWL++T+
Sbjct: 176 SADTVAFFAMYAWKLGWLERTE 197


>AT2G48070.3 | Symbols: RPH1 | resistance to phytophthora 1 |
           chr2:19662863-19663773 FORWARD LENGTH=201
          Length = 201

 Score =  204 bits (520), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 101/146 (69%), Positives = 111/146 (76%), Gaps = 4/146 (2%)

Query: 87  LDKELKKVAQKTAATFAPRASTASKNPAVPGSTLYTVFEVQGYVSMLLGGALSFNLIFPS 146
           L K+LKKV  KTAATFAPRASTASKNPA+PG+TLY VFEVQGY SM LGG LSFNL+FPS
Sbjct: 56  LGKDLKKVVNKTAATFAPRASTASKNPALPGTTLYKVFEVQGYASMFLGGVLSFNLLFPS 115

Query: 147 NEPDLWRLMGMWSVWMFTIPSLRARDCSKNEKEAXXXXXXXXXXXXXXXXXXXKSFAVVW 206
           +EPDLWRLMGMWS+WMFTIPSLRARDC   EKEA                   KSFA+VW
Sbjct: 116 SEPDLWRLMGMWSIWMFTIPSLRARDCPSKEKEALNYLFLIVPLLNVAIPFFWKSFALVW 175

Query: 207 SADIVAFFGMYAWK----LGWLQKTD 228
           SAD VAFF MYAWK    LGWL++T+
Sbjct: 176 SADTVAFFAMYAWKVCRMLGWLERTE 201