Miyakogusa Predicted Gene

Lj1g3v4404380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4404380.1 Non Chatacterized Hit- tr|I1JNP9|I1JNP9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28082 PE,79.07,0,WD40
repeats,WD40 repeat; no description,WD40/YVTN repeat-like-containing
domain; BREAST CARCINOMA A,CUFF.32329.1
         (983 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03380.1 | Symbols: ATATG18G, ATG18G | homolog of yeast autop...   789   0.0  
AT1G54710.1 | Symbols: ATATG18H, ATG18H | homolog of yeast autop...   683   0.0  
AT5G54730.1 | Symbols: ATATG18F, ATG18F, G18F | homolog of yeast...   320   3e-87
AT5G05150.1 | Symbols: ATATG18E, ATG18E, G18E | autophagy-relate...    50   7e-06
AT2G40810.2 | Symbols: ATATG18C, ATG18C | homolog of yeast autop...    50   1e-05
AT2G40810.1 | Symbols: ATATG18C, ATG18C | homolog of yeast autop...    50   1e-05

>AT1G03380.1 | Symbols: ATATG18G, ATG18G | homolog of yeast
           autophagy 18 (ATG18) G | chr1:836155-840362 FORWARD
           LENGTH=959
          Length = 959

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/903 (49%), Positives = 545/903 (60%), Gaps = 28/903 (3%)

Query: 11  LLPNSLRIISLCLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDHKDQVTWAGFDKLEID 70
           LLPNS +IIS CLK                            ED KDQVTWAGF  LE+ 
Sbjct: 12  LLPNSFKIISSCLK-TVSANATNVASSVRSAGASVAASISAAEDDKDQVTWAGFGILELG 70

Query: 71  QSTFKHVLLLGYLNGFQVLDVEDASRFSELVSKRDGPVSFLQMQPFPIGCNGQEEGFRKS 130
           Q   +HVLLLGY NGFQV DVEDAS F+ELVSKR GPVSFLQMQP P   +G  EGF  S
Sbjct: 71  QHVTRHVLLLGYQNGFQVFDVEDASNFNELVSKRGGPVSFLQMQPLP-ARSGDHEGFWNS 129

Query: 131 HPLLLVVX--XXXXXXXXXXXXXXXXXXRDGNVETLPGNSGNYATAVRFYSLKSQCYVHV 188
           HPLLLVV                     RDG+ ++  G++ NY T VRFYSL+S  YV+V
Sbjct: 130 HPLLLVVAGDETNGTGLGHSFSQNGSLARDGSSDSKAGDAINYPTTVRFYSLRSHSYVYV 189

Query: 189 LRFRTSVCMIRCSSRIVAVGLATQIYCFDAATLENKFSVLTYPIPQLAGQGKTGVNVGYG 248
           LRFR+SVCMIRCSSR+VAVGLA QIYC DA TLENKFSVLTYP+PQ   QG T VNVGYG
Sbjct: 190 LRFRSSVCMIRCSSRVVAVGLANQIYCVDALTLENKFSVLTYPVPQPVRQGTTRVNVGYG 249

Query: 249 PMAVGPRWLAYASNSLLPSNLGCLSPQNLXXXXXXXXXXXXXNGHLVARYAMESSKHLAA 308
           PMAVGPRWLAYAS S +    G LSPQ                   +ARYAMESSK LA 
Sbjct: 250 PMAVGPRWLAYASKSSMTMKTGRLSPQTFTSSPSLSPSSSSGGSSFMARYAMESSKQLAN 309

Query: 309 GII-----------KYCQELLPDGSASPIPLNSGGKVGRVTGIDMDNAGMVVVKDFVSRV 357
           G+I           KYCQ++LPDGS SP   N+  KVG V+G D +NAGMV VKD VS  
Sbjct: 310 GLINLGDMGYKTLSKYCQDMLPDGSTSPASPNAIWKVGGVSGSDAENAGMVAVKDLVSGA 369

Query: 358 VISQFKAHSSPISALCFDPSGTLLVTASVYGNSINIFRIMPSRTYKGSGVPGYNWSCSHV 417
           ++SQFKAH+SPISALCFDPSGTLLVTASV GN+IN+F+IMPSR++   G   Y W  SHV
Sbjct: 370 LVSQFKAHTSPISALCFDPSGTLLVTASVCGNNINVFQIMPSRSHNAPGDLSYEWESSHV 429

Query: 418 HLYKLHRGITPAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGDTGFQVISSQGEEPS 477
           HL+KLHRGIT A++QDICFS  SQW+AI+SSKGTCH+FVL+  G D  FQ    +GEEP+
Sbjct: 430 HLFKLHRGITSAIVQDICFSQQSQWVAIISSKGTCHIFVLNSSGSDAAFQ--PCEGEEPT 487

Query: 478 LLPVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIKYSSFGWLNSVNNSAANATGKVFV 537
            LP                               RIKYSSFGWLN+V+N+   ATGKVFV
Sbjct: 488 RLPASSLPWWFTQSLSSNQQSLSPPTAVALSVVSRIKYSSFGWLNTVSNATTAATGKVFV 547

Query: 538 PSGAIAAIFHNSLSHSQQPINSKENPLEYILVYTPSGHVVQHELLPSVGSETSDSVSTNQ 597
           PSGA+AA+FH S++H  Q +NS+ N LE+ILVYTPSGHVVQHELLPSV +E+ ++    Q
Sbjct: 548 PSGAVAAVFHKSVTHDLQ-LNSRTNALEHILVYTPSGHVVQHELLPSVCTESPENGLRVQ 606

Query: 598 STS-LLLQEDEFRVKVEPIQWWDVCRRSEWPERGDPFNNTFDNDKEGGMEKVQEKMCYGN 656
            TS + +QED+ RVKVEPIQWWDVCRRS+W E  +    +   +K+  +E V   +    
Sbjct: 607 KTSHVQVQEDDLRVKVEPIQWWDVCRRSDWLETEERLPKSI-TEKQYDLETVSNHLTSHE 665

Query: 657 IHRLDFLDISDGIRE-KTVKPSSGNPQDRSNSYLSNAEVQVNFRGLPIWQKSKIGFYTMS 715
              L  LD++    E K +K  S  P +RS+ YLSN EV+V    LP+WQ SKI F+ M 
Sbjct: 666 DACLS-LDMNSHFSEDKYLKSCSEKPPERSHCYLSNFEVKVTSGMLPVWQNSKISFHVMD 724

Query: 716 CVRTSFNAGGESEIEKVSAKEVEIRRKELLPVFDHFHSIRPSWNERSLAGERYLSPTPPV 775
             R S + GGE EIEKV A E+EI++K+LLPVFDHFHS + +  +R      + S T   
Sbjct: 725 SPRDSSSTGGEFEIEKVPAHELEIKQKKLLPVFDHFHSTKATLEDRFSMKCYHTSAT--- 781

Query: 776 PNHAEDKETADVTVICHSNPAXXXXXXXXXXXXXRRIENLLDLDQVASSYQMLGEIYKER 835
            +H  + +     + CHS P              +++ENL D D +++S +    +Y   
Sbjct: 782 GSHQVNGKICQDIINCHSKPGSIESAESSEEGSTKQMENLHDSDHMSNSIKSSLPLYPTV 841

Query: 836 MGAINADPSLQNHFVMESPLLSGNSKQVDFHVDHCATAGPIFQ---GRNMTSEGRDSAGI 892
            G          +  ME P+ +  S   +  + +  T  PI        M S G+   G 
Sbjct: 842 NGIYKEIEKNNANGWMEKPVTAKLSTLKETRITNGFTTPPILTDSVNEQMLSTGKPPMGF 901

Query: 893 GIS 895
           G +
Sbjct: 902 GFA 904


>AT1G54710.1 | Symbols: ATATG18H, ATG18H | homolog of yeast
           autophagy 18 (ATG18) H | chr1:20417019-20420733 REVERSE
           LENGTH=927
          Length = 927

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/783 (48%), Positives = 482/783 (61%), Gaps = 78/783 (9%)

Query: 11  LLPNSLRIISLCLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDHKDQVTWAGFDKLEID 70
            LPNSL+ IS C++                             + KDQV W+ FD+L   
Sbjct: 27  FLPNSLKFISTCIRTASSGVRSASASVAASLSSDS-------HELKDQVLWSSFDRLHTS 79

Query: 71  QSTFKHVLLLGYLNGFQVLDVEDASRFSELVSKRDGPVSFLQMQPFPIGCNGQEEGFRKS 130
           +S+FK+VLLLGY NGFQVLD++D++  +E VS+RD PV+FLQMQP P  C+G E GFR S
Sbjct: 80  ESSFKNVLLLGYTNGFQVLDIDDSNDVTEFVSRRDDPVTFLQMQPLPAKCDGVE-GFRSS 138

Query: 131 HPLLLVVXXXXXXXXXXXXXXXXXXXRDGNVETLPGNSGNYA---TAVRFYSLKSQCYVH 187
           HP+LL V                   RDG+V    G     A   T VRFYSL+S  YVH
Sbjct: 139 HPILLAVADEAKGSGPIVTS------RDGSVRN--GYEDPLALSPTVVRFYSLRSHNYVH 190

Query: 188 VLRFRTSVCMIRCSSRIVAVGLATQIYCFDAATLENKFSVLTYPIPQLAGQGKTGVNVGY 247
           VLRFR++V M+RCS RIVAVGL +QIYCFDA TLENKFSVL+YP+PQL  QG +GVNVGY
Sbjct: 191 VLRFRSTVYMVRCSPRIVAVGLGSQIYCFDALTLENKFSVLSYPVPQLGNQGISGVNVGY 250

Query: 248 GPMAVGPRWLAYASNSLLPSNLGCLSPQNLXXXXXXXXXXXXXNGHLVARYAMESSKHLA 307
           GPMAVG RWLAYASNS L S++G LSPQN+             NG+LVARYAMESSKHLA
Sbjct: 251 GPMAVGARWLAYASNSPLSSSIGRLSPQNVTPPGVSPSTSPN-NGNLVARYAMESSKHLA 309

Query: 308 AGII-----------KYCQELLPDGSASPIPLNSGGKVGRVTG--IDMDNAGMVVVKDFV 354
           AG++           KYCQ+L  DG    +  + G KVGRV     + D  G V+VKDF 
Sbjct: 310 AGLLNLGDKGYKTISKYCQDLKHDGPGPSLSSSPGRKVGRVGSHSAESDVVGTVIVKDFE 369

Query: 355 SRVVISQFKAHSSPISALCFDPSGTLLVTASVYGNSINIFRIMPSRTYKGSGVPGYNWSC 414
           SR +I+QF+AH+SPISALCFDPSGTLLVTAS++GN+IN+FRIMP+ T  G G   Y+WS 
Sbjct: 370 SRAIIAQFRAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPTPTKNGPGAQSYDWSS 429

Query: 415 SHVHLYKLHRGITPAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGDTGFQVISSQGE 474
           SHV LYKLHRG+T A+IQDICFS +SQWIAIVSSK TCH++VLSPFGG+   ++ +SQ +
Sbjct: 430 SHVPLYKLHRGMTSAVIQDICFSSYSQWIAIVSSKSTCHIYVLSPFGGENVLEIRNSQFD 489

Query: 475 EPSLLPVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIKYSSFGWLNSVNNSAANATGK 534
            P+L P                               RIK ++F       ++A++  GK
Sbjct: 490 GPTLAPTLSLPWWSSPSFMTTHFSYPPPASVTLSVVSRIKCNNFF------HAASSVVGK 543

Query: 535 VFVPSGAIAAIFHNSLSHSQQPINSKENPLEYILVYTPSGHVVQHELLPSVGSETSDSVS 594
              PSG +AA+FH S+    Q   S    L+Y+LVYTPSGHVVQ++L+PS+G + ++S +
Sbjct: 544 PTFPSGCLAAVFHQSVPQESQ---SSSPALDYLLVYTPSGHVVQYKLIPSLGGDQAESNT 600

Query: 595 TNQSTSLLLQEDEFRVKVEPIQWWDVCRRSEWPERGDPFNNTFDNDKEGGMEKVQEKMC- 653
            N +TS L  E+E RVKVEP+Q WDVCRR++WPER                   +E +C 
Sbjct: 601 RNGATSGLTSEEELRVKVEPVQCWDVCRRADWPER-------------------EENICG 641

Query: 654 --YGNIHRLDF-LDISDGIREKTVKPSSGNPQDRSNSYLSNAEVQVNFRGLPIWQKSKIG 710
             YG     +  +D SD   E   K     P ++ + YL+NAEV +N    PIWQ S+I 
Sbjct: 642 LTYGGRKNAELTVDTSDS--EDQTK-----PLEKHHVYLANAEVLINSGRKPIWQNSEIS 694

Query: 711 FYTMSCVRT------SFNAGGESEIEKVSAKEVEIRRKELLPVFDHFHSIRPSWNERSLA 764
           FY M    +      S   GGE+EI KVSA EV+IRRK+LLPV+D+FHS+  S   R  +
Sbjct: 695 FYPMYPPDSDGKNLNSHQGGGETEIGKVSANEVDIRRKDLLPVYDNFHSVYTSMRNRGFS 754

Query: 765 GER 767
           GER
Sbjct: 755 GER 757


>AT5G54730.1 | Symbols: ATATG18F, ATG18F, G18F | homolog of yeast
           autophagy 18 (ATG18) F | chr5:22233977-22236804 REVERSE
           LENGTH=763
          Length = 763

 Score =  320 bits (821), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 248/735 (33%), Positives = 354/735 (48%), Gaps = 130/735 (17%)

Query: 55  HKDQVTWAGFDKLEIDQSTFKHVLLLGYLNGFQVLDVEDASRFSELVSKRDGPVSFLQMQ 114
           H DQV WAGFD L+ +    + VLLL + +GFQV DVED      +VS  DG   F+QM 
Sbjct: 57  HHDQVLWAGFDNLQKEDGDTRRVLLLAFKSGFQVWDVEDTENVHVIVSAHDGQAFFMQML 116

Query: 115 PFPIGCNGQEEGFRKSHPLLLVVXXXXXXXXXXXXXXXXXXXRDGNVETLPGNSG-NYAT 173
             PI     ++ F KS PLL V                            PG+      T
Sbjct: 117 LNPINSGVLDDRFYKSRPLLAVCGDYSSKKISSDN---------------PGSETVATPT 161

Query: 174 AVRFYSLKSQCYVHVLRFRTSVCMIRCSSRIVAVGLATQIYCFDAATLENKFSVLTYPIP 233
            V  YSLKSQ YVH L+FR ++  +RC SRIVAV  A QI CFDAATLE  + ++T  I 
Sbjct: 162 NVYVYSLKSQSYVHTLKFRATIYSVRCCSRIVAVLQAAQIDCFDAATLEMDYRIVTNSI- 220

Query: 234 QLAGQGKTGVNVGYGPMAVGPRWLAYASNSLLPSNLGCLSPQNLXXXXXXXXXXXXXNGH 293
            + G     + VGYGP+AVGPRW+AY+ + +  S+    + + +                
Sbjct: 221 -VCGS----LGVGYGPLAVGPRWIAYSGSRIATSSSAIFTSEIVSLSTSSPS-------- 267

Query: 294 LVARYAMESSKHLAAGI-----------IKYCQELLPDGSASPIPLNSGGKVGRVTGIDM 342
            VA++A +SSK LA+GI            KYC E+LP+     IP   G  VG     D 
Sbjct: 268 -VAQFARDSSKQLASGIANLGDKGYRSLTKYCSEVLPN---PYIPGLKGIGVGNEKVADA 323

Query: 343 DNAGMVVVKDFVSRVVISQFKAHSSPISALCFDPSGTLLVTASVYGNSINIFRIMP---- 398
           ++ GMV+VKD  ++ VI+QFKAH SPISALCFD SG LLVTAS+ G++IN+FRIMP    
Sbjct: 324 ESIGMVIVKDITNKSVITQFKAHKSPISALCFDQSGLLLVTASIQGHNINVFRIMPTIST 383

Query: 399 SRTYKGSGVPGYNWSCSHVHLYKLHRGITPAMIQDICFSHFSQWIAIVSSKGTCHLFVLS 458
           SR  K         + +  HL++L RG T A+IQDICFS  S  I + SS+GT HLF ++
Sbjct: 384 SRAVK---------TTTFAHLFRLQRGFTNAVIQDICFSKDSNLIVVGSSRGTSHLFEIN 434

Query: 459 PFGGDTGFQVISSQGEEPSLLPVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIKY-SS 517
           P            +G+ P  +                                RI+  +S
Sbjct: 435 P----------EKEGDAPVPMSAI----------------------------SRIRSGNS 456

Query: 518 FGWLNSVNNSAANATGKVF--VPSGAIAAIF-------HNSLSHSQQPINSKENPLEYIL 568
            GW+ +V+ +A+ A G V   VP G + + F       +N+   S   + SK N    +L
Sbjct: 457 SGWIGTVSGAASAAAGMVAGSVP-GTVTSTFCYCDEKSNNNYYGSVADMCSKTN----LL 511

Query: 569 VYTPSGHVVQHELLP---SVGSETSDSVSTNQSTSLLLQEDEFRVKVEPIQWWDVCRRSE 625
           V+ PSG + Q+ L      VG ET+     +  + L   E E ++ V+PI+ W + +   
Sbjct: 512 VFAPSGCMTQYALREHQVGVGHETAAMTGFDSESGL---ETEGKLAVDPIRRWSMIQNQS 568

Query: 626 WPERGDPFNNTFDNDKEGGMEKVQEKMCYGNIHRLDFLDISDGIREKTVKPSSGNPQDRS 685
             E  DP ++ +     GG     +   +  + R   ++ +     K  K  +    D+ 
Sbjct: 569 RRETHDPHSDIYG----GGTSVDSKSKVFPEVVRKQSVEEA----WKVSKKGTTRVVDKR 620

Query: 686 NSYLSNAEVQVNF--RGLPIWQKSKIGFYTMSCVRTSFNAGG---ESEIEKVSAKEVEIR 740
           + Y+  AE Q       LP+W + K  F  +   R    +GG   E EIE +  + +E R
Sbjct: 621 HLYIYEAEQQQTHLPTQLPLWARRKFRFQELVLNRGEEISGGGGREMEIEGIQTRTIEAR 680

Query: 741 RKELLPVFDHFHSIR 755
            ++L+PV+ +  S R
Sbjct: 681 TRDLVPVWGYLQSPR 695


>AT5G05150.1 | Symbols: ATATG18E, ATG18E, G18E | autophagy-related
           gene 18E | chr5:1524841-1526199 REVERSE LENGTH=374
          Length = 374

 Score = 50.4 bits (119), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 17/102 (16%)

Query: 358 VISQFKAHSSPISALCFDPSGTLLVTASVYGNSINIFRIMPSRTYKGSGVPGYNWSCSHV 417
           VI   KAH S I+ +     G+LL TAS  G  I IF          + V G        
Sbjct: 196 VIKFIKAHDSAIACMTLTLDGSLLATASTKGTLIRIF----------NAVDG-------T 238

Query: 418 HLYKLHRGITPAMIQDICFSHFSQWIAIVSSKGTCHLFVLSP 459
            L +  RG+  A I ++  S   +W+A  S KGT H+F L P
Sbjct: 239 LLQEFRRGVERAEIYNVAISSNLKWVAASSEKGTLHVFRLRP 280


>AT2G40810.2 | Symbols: ATATG18C, ATG18C | homolog of yeast
           autophagy 18C | chr2:17032686-17034338 FORWARD
           LENGTH=393
          Length = 393

 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 48/114 (42%), Gaps = 18/114 (15%)

Query: 344 NAGMVVVKDFVSRVVISQFKAHSSPISALCFDPSGTLLVTASVYGNSINIFRIMPSRTYK 403
           N G + V+ F   +V     AH S I+ +     G LL TAS  G  I IF  M      
Sbjct: 180 NRGEIRVEHFGLNMV-QIINAHDSSIACMTLTLDGLLLATASTKGTLIRIFNTMDG---- 234

Query: 404 GSGVPGYNWSCSHVHLYKLHRGITPAMIQDICFSHFSQWIAIVSSKGTCHLFVL 457
                          L ++ RG+  A I  I  S   QW+A+ S KGT H+F L
Sbjct: 235 -------------TRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSL 275


>AT2G40810.1 | Symbols: ATATG18C, ATG18C | homolog of yeast
           autophagy 18C | chr2:17032686-17034338 FORWARD
           LENGTH=393
          Length = 393

 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 48/114 (42%), Gaps = 18/114 (15%)

Query: 344 NAGMVVVKDFVSRVVISQFKAHSSPISALCFDPSGTLLVTASVYGNSINIFRIMPSRTYK 403
           N G + V+ F   +V     AH S I+ +     G LL TAS  G  I IF  M      
Sbjct: 180 NRGEIRVEHFGLNMV-QIINAHDSSIACMTLTLDGLLLATASTKGTLIRIFNTMDG---- 234

Query: 404 GSGVPGYNWSCSHVHLYKLHRGITPAMIQDICFSHFSQWIAIVSSKGTCHLFVL 457
                          L ++ RG+  A I  I  S   QW+A+ S KGT H+F L
Sbjct: 235 -------------TRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSL 275