Miyakogusa Predicted Gene
- Lj1g3v4393320.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4393320.1 tr|B9N472|B9N472_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_581670 PE=4
SV=1,28.12,4e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.32306.1
(555 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 461 e-130
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 458 e-129
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 452 e-127
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 428 e-120
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 427 e-120
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-119
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 389 e-108
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 388 e-108
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 378 e-105
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 369 e-102
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 367 e-102
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 362 e-100
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 362 e-100
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 6e-99
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 2e-98
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 356 2e-98
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 354 8e-98
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 1e-97
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 1e-97
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 352 3e-97
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 6e-97
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 351 9e-97
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 349 2e-96
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 348 4e-96
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 5e-96
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 8e-96
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 346 2e-95
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 4e-95
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 345 4e-95
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 345 6e-95
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 6e-95
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 7e-94
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 2e-93
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 3e-93
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 4e-93
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 9e-93
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 337 2e-92
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 332 3e-91
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 4e-91
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 331 8e-91
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 330 1e-90
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 1e-90
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 9e-90
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 326 3e-89
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 325 4e-89
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 3e-88
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 3e-88
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 4e-88
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 6e-88
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 9e-88
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 9e-88
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 9e-88
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 318 5e-87
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 318 6e-87
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 3e-85
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 5e-85
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 6e-85
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 311 6e-85
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 7e-85
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 311 1e-84
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 2e-84
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 3e-84
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 7e-84
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 308 8e-84
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 307 1e-83
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 307 1e-83
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 4e-83
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 4e-83
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 6e-83
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 304 1e-82
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 6e-82
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 8e-82
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 295 7e-80
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 293 2e-79
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 4e-79
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 9e-79
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 4e-77
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 285 4e-77
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 283 2e-76
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 282 4e-76
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 282 5e-76
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 276 2e-74
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 6e-74
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 7e-74
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 4e-72
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 9e-70
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 3e-68
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 5e-68
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 7e-68
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 8e-65
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 238 1e-62
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 9e-62
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 226 4e-59
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 1e-47
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 4e-31
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 1e-28
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 120 2e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 114 2e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 4e-25
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 111 1e-24
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 105 6e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 6e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 99 1e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 95 1e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 94 2e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 94 2e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 2e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 94 3e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 89 7e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 85 1e-16
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 82 1e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 81 2e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 77 4e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 75 8e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 74 3e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 74 3e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 71 2e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 5e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 65 8e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 7e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 4e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 4e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 2e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 9e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 461 bits (1187), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/540 (42%), Positives = 344/540 (63%), Gaps = 6/540 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRH---RVEMDCRSFVFALKACEELSGDFEGESVHC 58
WN IRG+ ++ NP +F + +MLRH D ++ K C +L G +
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG 180
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
V KL + V N IH +A G +++AR+VFDES ++D+V+W + +GY +E
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+ ++ LM V+P++VT+I ++S+CS +GD+ G+ +E +++ +R ++ L NAL+D
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
M+ KCG + AR +FD +E R + SWT+M++GYA+CG L+ +R+ D K+VV W+AM
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK- 297
+ G Q + +++L LF EM + P+E ++ LSAC QL L++G WIH++ IEK
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY--IEKY 418
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
+ +V L +++DMYAKCG+I A VF+ I RN +++ ++I G A +G A A++ F
Sbjct: 419 SLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYF 478
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
++M G PD+ITF+ LL+AC HGG+I G++YF M+ + + P+ +HYS M+DLLGR
Sbjct: 479 NEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGR 538
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLL 477
GLL+EA L+ SMPM+ A WGALL CRMHGNVEL +A LL LDP DSGIYVLL
Sbjct: 539 AGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLL 598
Query: 478 ANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
+ W D KR R +M ++GV+KIPG S +EV+G EF+V D+S P+SE+IY L
Sbjct: 599 DGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 156/298 (52%), Gaps = 12/298 (4%)
Query: 169 SLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVN--GYAKCGDLENARR 222
S LHN LL + KC L+ +++ +M D F+ + ++ ++ L+ + +
Sbjct: 49 SFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVK 108
Query: 223 FLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV---PEEHALVSVLSACGQ 279
L + N+ SW+ + G+S++ PKES L+ +M+ G P+ + C
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCAD 168
Query: 280 LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNS 339
L +LGH I H V++ + + NA + M+A CG +E A +VF+ R+LVSWN
Sbjct: 169 LRLSSLGHMILGH-VLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 340 MIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNY 399
+I GY G+A++A+ V+ M G KPDD+T + L+++CS G ++ G+E++ ++ N
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN- 286
Query: 400 GIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
G++ + ++D+ + G + EA + ++ + +W +++ G ++++R
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI-VSWTTMISGYARCGLLDVSR 343
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 6/234 (2%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN MI G +A+ A + F M + D + + L AC +L G +H +
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K + + L+ YA G + A VF ++ +T+T + G A + A+
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDM 179
FN M+ + P+E+T I +LSAC G I+ GR M+ + N+ L ++ ++D+
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 180 YVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLE----NARRFLDQTP 228
+ G L A L + M D W +++ G G++E A++ L+ P
Sbjct: 536 LGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDP 589
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/557 (40%), Positives = 349/557 (62%), Gaps = 9/557 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCR----SFVFALKACEELSGDFEGESVH 57
WNT+IR Y +P ++ FL M+ E C +F F +KA E+S G+S+H
Sbjct: 98 WNTLIRAYASGPDPVLSIWAFLDMVS---ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 58 CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
+ K S++ V N LIH Y G L A +VF KDVV+W +M +G+ + +
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ELF M DV+ + VT++ VLSAC+++ ++E GR+V +E+ + +L L NA+L
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
DMY KCGS+ A+ LFD ME +D +WT+M++GYA D E AR L+ P K++V+W+A
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 238 MLAGYSQNNKPKESLKLFHEM-MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
+++ Y QN KP E+L +FHE+ + + + LVS LSAC Q+ L LG WIH ++ +
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS-YIKK 393
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
G+ + + +A++ MY+KCG +E + EVFN++ +R++ W++MI G A +G +AV++
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 357 FDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG 416
F +M+ KP+ +TF N+ ACSH GL+ E + F+ ME NYGI P+ +HY+C++D+LG
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513
Query: 417 RTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVL 476
R+G L++A + I +MP+ P + WGALL AC++H N+ LA ++ LL L+P + G +VL
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL 573
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKV 536
L+NI A KW +V +R MR G+KK PG S +E+DG EFL D +HP SE++Y
Sbjct: 574 LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 633
Query: 537 LDEIFLSSELEDYDTDI 553
L E+ + Y+ +I
Sbjct: 634 LHEVMEKLKSNGYEPEI 650
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 192/400 (48%), Gaps = 67/400 (16%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELF-NLMLRGDVEPNEVTLIAVLS 143
L++AR+VFDE + W T+ YAS L++ F +++ PN+ T ++
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
A +++ + +G+ +H K + + + N+L+ Y CG L +A ++F ++ +DV S
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
W SM+NG+ Q P ++L+LF +M V
Sbjct: 200 WNSMINGFV-------------------------------QKGSPDKALELFKKMESEDV 228
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI---- 319
+V VLSAC ++ L G + ++ E ++ ++TLANA+LDMY KCGSI
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCS-YIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 320 ---------------------------EAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
EAA EV N++ ++++V+WN++I+ Y NG+ +
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 353 AVNVFDQMRCM-GFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
A+ VF +++ K + IT V+ L+AC+ G + G+ + ++ + +GI+ S +
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSAL 406
Query: 412 IDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
I + + G L+++ E+ S+ + W A++ MHG
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDV-FVWSAMIGGLAMHG 445
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 145/307 (47%), Gaps = 10/307 (3%)
Query: 158 HENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM----ETRDVFSWTSM--VNGY 211
H N N + N + + + +C SL ++ M D +S + + +
Sbjct: 15 HPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAAL 74
Query: 212 AKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG-AGVVPEEHAL 270
+ LE AR+ D+ P N +W+ ++ Y+ P S+ F +M+ + P ++
Sbjct: 75 SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
++ A ++S L+LG +H ++ + V +AN+++ Y CG +++A +VF I
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHG-MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
E+++VSWNSMI G+ G +A+ +F +M K +T V +L+AC+ + G++
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253
Query: 391 YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMH 450
+E N + + M+D+ + G +++A L +M + W +L+ +
Sbjct: 254 VCSYIEENR-VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD-NVTWTTMLDGYAIS 311
Query: 451 GNVELAR 457
+ E AR
Sbjct: 312 EDYEAAR 318
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/553 (40%), Positives = 335/553 (60%), Gaps = 2/553 (0%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCV 59
+WN MI+G+ K +L ML+ V D +F F L + G G+ +HC
Sbjct: 101 VWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCH 160
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V K G S L V+N L+ Y+ G + AR VFD +DV +W M GY E +
Sbjct: 161 VVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEES 220
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+EL M R V P VTL+ VLSACS++ D ++ +RVHE + + SL L NAL++
Sbjct: 221 IELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNA 280
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y CG + A +F M+ RDV SWTS+V GY + G+L+ AR + DQ P ++ +SW+ M+
Sbjct: 281 YAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMI 340
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
GY + ESL++F EM AG++P+E +VSVL+AC L L +G WI + ++ + +
Sbjct: 341 DGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI-KTYIDKNKI 399
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V + NA++DMY KCG E A +VF+ + +R+ +W +M+ G A NGQ ++A+ VF Q
Sbjct: 400 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 459
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M+ M +PDDIT++ +L+AC+H G++ + +++F M ++ I+P HY CM+D+LGR G
Sbjct: 460 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAG 519
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
L+KEAYE++ MPM P WGALL A R+H + +A L+A +L L+P++ +Y LL N
Sbjct: 520 LVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCN 579
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
I A ++W D++ VR + D +KK PG SL+EV+G EF+ D+SH QSEEIY L+E
Sbjct: 580 IYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEE 639
Query: 540 IFLSSELEDYDTD 552
+ S Y D
Sbjct: 640 LAQESTFAAYLPD 652
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 218/521 (41%), Gaps = 111/521 (21%)
Query: 13 RNP-----NIAFSYF----LRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKL 63
RNP N S F + + + D F+ L C+ + F+ + R
Sbjct: 4 RNPLKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKT-TDQFKQLHSQSITR-- 60
Query: 64 GFDSELLVRNGLIHFYADR--GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G + L F+ R G + +A ++F + DVV W M G++ +C +
Sbjct: 61 GVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVR 120
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGD-IEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
L+ ML+ V P+ T +L+ + G + G+++H ++ K + +L + NAL+ MY
Sbjct: 121 LYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY 180
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
CG + AR +FDR DVFSW M++GY + + E
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYE---------------------- 218
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
ES++L EM V P L+ VLSAC ++ +L +H+ +V E
Sbjct: 219 ---------ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE-YVSECKTE 268
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ- 359
PS+ L NA+++ YA CG ++ A +F ++ R+++SW S++ GY G K A FDQ
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 360 ------------------------------MRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
M+ G PD+ T V++LTAC+H G + G+
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 390 EYFYTMERNY------------------GIKPKREH------------YSCMIDLLGRTG 419
+++N G K + ++ M+ L G
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 420 LLKEAYEL---ITSMPMQPCEAAWGALLNACRMHGNVELAR 457
+EA ++ + M +QP + + +L+AC G V+ AR
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQAR 489
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 333/558 (59%), Gaps = 6/558 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN+M+ G+ + A YF M + ++ SF L AC L+ +G VH ++
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K F S++ + + L+ Y+ G + A+ VFDE ++VV+W ++ + + A++
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN-MRCSLNLHNALLDMY 180
+F +ML VEP+EVTL +V+SAC+ + I++G+ VH + K + +R + L NA +DMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KC + AR +FD M R+V + TSM++GYA + AR + +NVVSW+A++A
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH-----FVI 295
GY+QN + +E+L LF + V P ++ ++L AC L+ L+LG H H F
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
+ G + + N+++DMY KCG +E VF + ER+ VSWN+MI G+A NG +A+
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 356 VFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLL 415
+F +M G KPD IT + +L+AC H G + EG+ YF +M R++G+ P R+HY+CM+DLL
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 416 GRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYV 475
GR G L+EA +I MPMQP WG+LL AC++H N+ L + A LL ++P +SG YV
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599
Query: 476 LLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYK 535
LL+N+ A KW DV VR MR +GV K PG S +++ G F+V D+SHP+ ++I+
Sbjct: 600 LLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHS 659
Query: 536 VLDEIFLSSELEDYDTDI 553
+LD + E T+I
Sbjct: 660 LLDILIAEMRPEQDHTEI 677
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 173/304 (56%), Gaps = 2/304 (0%)
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
R VH ++ K + + N L+D Y KCGSL R++FD+M R++++W S+V G K
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVL 274
G L+ A P ++ +W++M++G++Q+++ +E+L F M G V E++ SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 275 SACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL 334
SAC L+ +N G +H + + V + +A++DMY+KCG++ A VF+ + +RN+
Sbjct: 160 SACSGLNDMNKGVQVHS-LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 335 VSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYT 394
VSWNS+I + NG A +A++VF M +PD++T ++++AC+ I GQE
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 395 MERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE 454
+ +N ++ + +D+ + +KEA + SMP++ A ++++ M + +
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV-IAETSMISGYAMAASTK 337
Query: 455 LARL 458
ARL
Sbjct: 338 AARL 341
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 208/456 (45%), Gaps = 99/456 (21%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE--------------------- 94
VH V K GF +E+ ++N LI Y+ G L+ R+VFD+
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 95 ----SSL------KDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
SL +D TW +M G+A + E A+ F +M + NE + +VLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
CS + D+ G +VH + K + + +AL+DMY KCG++ A+ +FD M R+V SW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
S++ C + QN E+L +F M+ + V
Sbjct: 222 NSLIT----C---------------------------FEQNGPAVEALDVFQMMLESRVE 250
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC-------- 316
P+E L SV+SAC LS + +G +H V + + L+NA +DMYAKC
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 317 -----------------------GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
S +AA +F ++ERN+VSWN++IAGY NG+ ++A
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG-QEYFYTMERNYGIKPKREH----Y 408
+++F ++ P +F N+L AC+ + G Q + + ++ + + E
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALL 444
+ +ID+ + G ++E Y + M + C +W A++
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDC-VSWNAMI 465
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 343/572 (59%), Gaps = 63/572 (11%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WNTM RG+ + +P A ++ M+ + + +F F LK+C + EG+ +H V
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160
Query: 61 RKLGFDSELLVRNGLIHFY-------------------------------ADRGWLKHAR 89
KLG D +L V LI Y A RG++++A+
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 90 EVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
++FDE +KDVV+W M GYA + A+ELF M++ +V P+E T++ V+SAC+Q G
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
IE+GR+VH ++ +L + NAL+D+Y
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLY----------------------------- 311
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
+KCG+LE A ++ P+K+V+SW+ ++ GY+ N KE+L LF EM+ +G P +
Sbjct: 312 --SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIE-KGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
++S+L AC L +++G WIH + KG+ + +L +++DMYAKCG IEAA +VFN+
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 329 ISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG 388
I ++L SWN+MI G+A +G+A + ++F +MR +G +PDDITFV LL+ACSH G++ G
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 389 QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACR 448
+ F TM ++Y + PK EHY CMIDLLG +GL KEA E+I M M+P W +LL AC+
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 449 MHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGH 508
MHGNVEL A NL+ ++PE+ G YVLL+NI A+ +W +V + R+L+ DKG+KK+PG
Sbjct: 550 MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609
Query: 509 SLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
S +E+D EF++ D+ HP++ EIY +L+E+
Sbjct: 610 SSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 641
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 229/397 (57%), Gaps = 5/397 (1%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L +A VF +++ W TMF G+A + A++L+ M+ + PN T VL +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
C++ + G+++H ++ K L +H +L+ MYV+ G L A ++FD+ RDV S+
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
T+++ GYA G +ENA++ D+ P K+VVSW+AM++GY++ KE+L+LF +MM V
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAE 324
P+E +V+V+SAC Q + LG +H ++ + G ++ + NA++D+Y+KCG +E A
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHL-WIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 325 VFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
+F + ++++SWN++I GY K+A+ +F +M G P+D+T +++L AC+H G
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 385 ISEGQ-EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
I G+ + Y +R G+ + +ID+ + G ++ A+++ S+ + ++W A+
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAM 441
Query: 444 LNACRMHGNVELA--RLSACNLLSLDPEDSGIYVLLA 478
+ MHG + + S + + P+D LL+
Sbjct: 442 IFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/552 (37%), Positives = 338/552 (61%), Gaps = 1/552 (0%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
++N +R ++ P ++ R+ +D SF+ LKA ++S FEG +H V
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVA 137
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K+ + V G + YA G + +AR VFDE S +DVVTW TM + Y + A
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAF 197
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+LF M +V P+E+ L ++SAC + G++ R ++E + + ++R +L AL+ MY
Sbjct: 198 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
G + ARE F +M R++F T+MV+GY+KCG L++A+ DQT K++V W+ M++
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
Y +++ P+E+L++F EM +G+ P+ ++ SV+SAC L L+ W+H + G+
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV-NGLE 376
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+++ NA+++MYAKCG ++A +VF + RN+VSW+SMI + +G+A A+++F +M
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
+ +P+++TFV +L CSH GL+ EG++ F +M Y I PK EHY CM+DL GR L
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANL 496
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
L+EA E+I SMP+ WG+L++ACR+HG +EL + +A +L L+P+ G VL++NI
Sbjct: 497 LREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNI 556
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
A E++W DV+ +R +M +K V K G S ++ +G+ EFL+ D+ H QS EIY LDE+
Sbjct: 557 YAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 616
Query: 541 FLSSELEDYDTD 552
+L Y D
Sbjct: 617 VSKLKLAGYVPD 628
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/548 (39%), Positives = 328/548 (59%), Gaps = 17/548 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTM+ GY + + A S F RM E + S+ L A + S E C++
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEA----CMLF 211
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K + L+ N L+ + + + AR+ FD +++DVV+W T+ GYA + A +
Sbjct: 212 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF+ DV T A++S Q +E R + + M ++N NA+L YV
Sbjct: 272 LFDESPVQDV----FTWTAMVSGYIQNRMVEEARELFDKMPERNEVS----WNAMLAGYV 323
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
+ + A+ELFD M R+V +W +M+ GYA+CG + A+ D+ P ++ VSW+AM+AG
Sbjct: 324 QGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
YSQ+ E+L+LF +M G + S LS C + L LG +H V + G
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV-KGGYET 442
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ NA+L MY KCGSIE A ++F ++ +++VSWN+MIAGY+ +G + A+ F+ M+
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G KPDD T V +L+ACSH GL+ +G++YFYTM ++YG+ P +HY+CM+DLLGR GLL
Sbjct: 503 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 562
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
++A+ L+ +MP +P A WG LL A R+HGN ELA +A + +++PE+SG+YVLL+N+
Sbjct: 563 EDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIF 541
A+ +WGDV ++R MRDKGVKK+PG+S +E+ + F V DE HP+ +EI+ L+E+
Sbjct: 623 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 682
Query: 542 LSSELEDY 549
L + Y
Sbjct: 683 LRMKKAGY 690
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 230/493 (46%), Gaps = 57/493 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN I Y + N A F RM R L+ +G+FE + R
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLR-----NGEFE------LAR 115
Query: 62 KLGFDS----ELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
KL FD +L+ N +I Y L ARE+F+ +DV +W TM GYA C +
Sbjct: 116 KL-FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A +F+ M E N+V+ A+LSA Q +E + ++ E +L N LL
Sbjct: 175 DARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSREN----WALVSWNCLL 226
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
+VK +V AR+ FD M RDV SW +++ GYA+ G ++ AR+ D++P ++V +W+A
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 238 MLAGYSQNNKPKESLKLFHEM----------MGAGVVPEEHALVSVLSACGQLSCLNLGH 287
M++GY QN +E+ +LF +M M AG V E + + C N+
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGER-MEMAKELFDVMPCRNVST 345
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAAN 347
W N ++ YA+CG I A +F+ + +R+ VSW +MIAGY+ +
Sbjct: 346 W------------------NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS 387
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREH 407
G + +A+ +F QM G + + +F + L+ C+ + G++ + + G +
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG-GYETGCFV 446
Query: 408 YSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMH--GNVELARLSACNLLS 465
+ ++ + + G ++EA +L M + +W ++ H G V L +
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGKDI-VSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 466 LDPEDSGIYVLLA 478
L P+D+ + +L+
Sbjct: 506 LKPDDATMVAVLS 518
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 174/361 (48%), Gaps = 41/361 (11%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
D+ W Y A+ +F M R + V+ ++S + G+ E+ R++
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLF 118
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLE 218
+ M +++ L N ++ YV+ +L ARELF+ M RDV SW +M++GYA+ G ++
Sbjct: 119 DEMPERD----LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 219 NARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACG 278
+AR D+ P KN VSW+A+L+ Y QN+K +E+ LF E ALVS
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-------ENWALVS------ 221
Query: 279 QLSCLNLGHWIHQHFVIEKGMH------PSVTLANAILDMYAKCGSIEAAAEVFNAISER 332
+CL LG ++ + ++E V N I+ YA+ G I+ A ++F+ +
Sbjct: 222 -WNCL-LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 333 NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYF 392
++ +W +M++GY N ++A +FD+M + +++++ +L G + +E F
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 393 YTME-RNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
M RN ++ MI + G + EA L MP + +W A++ G
Sbjct: 336 DVMPCRNVST------WNTMITGYAQCGKISEAKNLFDKMPKRD-PVSWAAMIAGYSQSG 388
Query: 452 N 452
+
Sbjct: 389 H 389
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 321/541 (59%), Gaps = 3/541 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLR-HRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
W +MI GY + A F RM+R V + + V + AC +L GE V+ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
R G + L+ + L+ Y + A+ +FDE ++ M Y + + A+
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+FNLM+ V P+ +++++ +S+CSQ+ +I G+ H + + N+ NAL+DMY
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+KC A +FDRM + V +W S+V GY + G+++ A + P KN+VSW+ +++
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 241 GYSQNNKPKESLKLFHEMMGA-GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
G Q + +E++++F M GV + ++S+ SACG L L+L WI+ +++ + G+
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGI 501
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V L ++DM+++CG E+A +FN+++ R++ +W + I A G A++A+ +FD
Sbjct: 502 QLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDD 561
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G KPD + FV LTACSHGGL+ +G+E FY+M + +G+ P+ HY CM+DLLGR G
Sbjct: 562 MIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAG 621
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
LL+EA +LI MPM+P + W +LL ACR+ GNVE+A +A + L PE +G YVLL+N
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSN 681
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
+ A+ +W D+ +VR M++KG++K PG S +++ G+ EF DESHP+ I +LDE
Sbjct: 682 VYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDE 741
Query: 540 I 540
+
Sbjct: 742 V 742
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 253/489 (51%), Gaps = 67/489 (13%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
M+N++IRGY + N A FLRM+ + D +F F L AC + G +H ++
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K+G+ +L V+N L+HFYA+ G L AR+VFDE S ++VV+WT+M GYA R+ ++ A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 121 ELFNLMLRG-DVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+LF M+R +V PN VT++ V+SAC+++ D+E G +V+ + + + + +AL+DM
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y+KC ++ A+ LFD ++ DL N AM
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNL--------------DLCN-----------------AMA 309
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+ Y + +E+L +F+ MM +GV P+ +++S +S+C QL + G H +V+ G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG-YVLRNGF 368
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA--------- 350
+ NA++DMY KC + A +F+ +S + +V+WNS++AGY NG+
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 351 ----------------------KQAVNVFDQMRCM-GFKPDDITFVNLLTACSHGGLISE 387
++A+ VF M+ G D +T +++ +AC H G +
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
+ +Y +E+N GI+ + ++D+ R G + A + S+ + +AW A + A
Sbjct: 489 AKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV-SAWTAAIGAM 546
Query: 448 RMHGNVELA 456
M GN E A
Sbjct: 547 AMAGNAERA 555
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 321/541 (59%), Gaps = 3/541 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLR-HRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
W +MI GY + A F RM+R V + + V + AC +L GE V+ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
R G + L+ + L+ Y + A+ +FDE ++ M Y + + A+
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+FNLM+ V P+ +++++ +S+CSQ+ +I G+ H + + N+ NAL+DMY
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+KC A +FDRM + V +W S+V GY + G+++ A + P KN+VSW+ +++
Sbjct: 383 MKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIIS 442
Query: 241 GYSQNNKPKESLKLFHEMMGA-GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
G Q + +E++++F M GV + ++S+ SACG L L+L WI+ +++ + G+
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGI 501
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V L ++DM+++CG E+A +FN+++ R++ +W + I A G A++A+ +FD
Sbjct: 502 QLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDD 561
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G KPD + FV LTACSHGGL+ +G+E FY+M + +G+ P+ HY CM+DLLGR G
Sbjct: 562 MIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAG 621
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
LL+EA +LI MPM+P + W +LL ACR+ GNVE+A +A + L PE +G YVLL+N
Sbjct: 622 LLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSN 681
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
+ A+ +W D+ +VR M++KG++K PG S +++ G+ EF DESHP+ I +LDE
Sbjct: 682 VYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDE 741
Query: 540 I 540
+
Sbjct: 742 V 742
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 253/489 (51%), Gaps = 67/489 (13%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
M+N++IRGY + N A FLRM+ + D +F F L AC + G +H ++
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K+G+ +L V+N L+HFYA+ G L AR+VFDE S ++VV+WT+M GYA R+ ++ A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 121 ELFNLMLRG-DVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+LF M+R +V PN VT++ V+SAC+++ D+E G +V+ + + + + +AL+DM
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y+KC ++ A+ LFD ++ DL N AM
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNL--------------DLCN-----------------AMA 309
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+ Y + +E+L +F+ MM +GV P+ +++S +S+C QL + G H +V+ G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH-GYVLRNGF 368
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA--------- 350
+ NA++DMY KC + A +F+ +S + +V+WNS++AGY NG+
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 351 ----------------------KQAVNVFDQMRCM-GFKPDDITFVNLLTACSHGGLISE 387
++A+ VF M+ G D +T +++ +AC H G +
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
+ +Y +E+N GI+ + ++D+ R G + A + S+ + +AW A + A
Sbjct: 489 AKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV-SAWTAAIGAM 546
Query: 448 RMHGNVELA 456
M GN E A
Sbjct: 547 AMAGNAERA 555
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 320/545 (58%), Gaps = 8/545 (1%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
M+N M++ ++ + F + + D + LK+ L EGE VH
Sbjct: 13 MYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYA 72
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G + + V N L+ YA G ++ +VFDE +DVV+W + Y E A+
Sbjct: 73 VKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAI 132
Query: 121 ELFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+F M + +++ +E T+++ LSACS + ++E+G R++ + + S+ + NAL+DM
Sbjct: 133 GVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDM 191
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
+ KCG L AR +FD M ++V WTSMV GY G ++ AR +++P K+VV W+AM+
Sbjct: 192 FCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
GY Q N+ E+L+LF M AG+ P+ LVS+L+ C Q L G WIH ++ E +
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG-YINENRV 310
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ A++DMYAKCG IE A EVF I ER+ SW S+I G A NG + +A++++ +
Sbjct: 311 TVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYE 370
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M +G + D ITFV +LTAC+HGG ++EG++ F++M + ++PK EH SC+IDLL R G
Sbjct: 371 MENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAG 430
Query: 420 LLKEAYELITSMPMQPCEA---AWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVL 476
LL EA ELI M + E + +LL+A R +GNV++A A L ++ DS + L
Sbjct: 431 LLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTL 490
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADE--SHPQSEEIY 534
LA++ A+ +W DV VR M+D G++K PG S +E+DG EF+V D+ SHP+ +EI
Sbjct: 491 LASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEIN 550
Query: 535 KVLDE 539
+L +
Sbjct: 551 SMLHQ 555
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 123/236 (52%), Gaps = 7/236 (2%)
Query: 224 LDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL 283
L QTP +++ ++ ML + + L LF E+ G G+ P+ L VL + G+L +
Sbjct: 5 LLQTP--SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 284 NLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAG 343
G +H + ++ G+ ++N+++ MYA G IE +VF+ + +R++VSWN +I+
Sbjct: 63 IEGEKVHG-YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISS 121
Query: 344 YAANGQAKQAVNVFDQM-RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIK 402
Y NG+ + A+ VF +M + K D+ T V+ L+ACS + G+ + + + +
Sbjct: 122 YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS 181
Query: 403 PKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARL 458
+ + ++D+ + G L +A + SM + + W +++ G ++ AR+
Sbjct: 182 VRIGN--ALVDMFCKCGCLDKARAVFDSMRDKNVK-CWTSMVFGYVSTGRIDEARV 234
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/543 (37%), Positives = 316/543 (58%), Gaps = 44/543 (8%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N++IR + + P AF F M R + D ++ F LKAC S + +H + K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 63 LGFDSELLVRNGLIHFYADRGWL--KHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
LG S++ V N LI Y+ G L + A ++F++ S +D V+W +M G
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLV--------- 196
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+ G++ RR+ + M ++++ N +LD Y
Sbjct: 197 --------------------------KAGELRDARRLFDEMPQRDLIS----WNTMLDGY 226
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP--HKNVVSWSAM 238
+C + A ELF++M R+ SW++MV GY+K GD+E AR D+ P KNVV+W+ +
Sbjct: 227 ARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+AGY++ KE+ +L +M+ +G+ + A++S+L+AC + L+LG IH +
Sbjct: 287 IAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS-ILKRSN 345
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ + + NA+LDMYAKCG+++ A +VFN I +++LVSWN+M+ G +G K+A+ +F
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+MR G +PD +TF+ +L +C+H GLI EG +YFY+ME+ Y + P+ EHY C++DLLGR
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRV 465
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G LKEA +++ +MPM+P WGALL ACRMH V++A+ NL+ LDP D G Y LL+
Sbjct: 466 GRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLS 525
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
NI A W V +RS M+ GV+K G S VE++ EF V D+SHP+S++IY++L
Sbjct: 526 NIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLG 585
Query: 539 EIF 541
+
Sbjct: 586 SLI 588
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 282 CLNLGHWIHQHF-VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSM 340
C NL H +I + +H + +A ++ + C A VFN + E N+ NS+
Sbjct: 29 CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSL 88
Query: 341 IAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYG 400
I +A N Q QA VF +M+ G D+ T+ LL ACS + + +E+ G
Sbjct: 89 IRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK-LG 147
Query: 401 IKPKREHYSCMIDLLGRTGLL--KEAYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
+ + +ID R G L ++A +L M + +W ++L G + AR
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDT-VSWNSMLGGLVKAGELRDAR 205
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 314/534 (58%), Gaps = 10/534 (1%)
Query: 26 LRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWL 85
+ ++ E+ S + L C L+ + + +H V + G D + LI G
Sbjct: 41 ISNQKELLVSSLISKLDDCINLN---QIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVP 97
Query: 86 --KHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLS 143
+AR V + ++ WT + GYA + A+ ++ M + ++ P T A+L
Sbjct: 98 MDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLK 157
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
AC M D+ +GR+ H + C + + N ++DMYVKC S+ AR++FD M RDV S
Sbjct: 158 ACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS 217
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
WT ++ YA+ G++E A + P K++V+W+AM+ G++QN KP+E+L+ F M +G+
Sbjct: 218 WTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS--VTLANAILDMYAKCGSIEA 321
+E + +SAC QL Q + G PS V + +A++DMY+KCG++E
Sbjct: 278 RADEVTVAGYISACAQLGASKYADRAVQ-IAQKSGYSPSDHVVIGSALIDMYSKCGNVEE 336
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG-FKPDDITFVNLLTACS 380
A VF +++ +N+ +++SMI G A +G+A++A+++F M KP+ +TFV L ACS
Sbjct: 337 AVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACS 396
Query: 381 HGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAW 440
H GL+ +G++ F +M + +G++P R+HY+CM+DLLGRTG L+EA ELI +M ++P W
Sbjct: 397 HSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVW 456
Query: 441 GALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDK 500
GALL ACR+H N E+A ++A +L L+P+ G Y+LL+N+ A+ WG V RVR L+++K
Sbjct: 457 GALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEK 516
Query: 501 GVKKIPGHS-LVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTDI 553
G+KK P S +V+ +G+ +F + +HP S +I L+E+ + Y D+
Sbjct: 517 GLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDL 570
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 146/364 (40%), Gaps = 65/364 (17%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+W +IRGY + A + + M + + +F LKAC + G H
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVT------------------ 102
+L + V N +I Y + AR+VFDE +DV++
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 103 -------------WTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
WT M G+A + A+E F+ M + + +EVT+ +SAC+Q+G
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 150 DIEMGRRVHENMEKKNMRCS--LNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM 207
+ R + +K S + + +AL+DMY KCG++ A +F M ++VF+++SM
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG-VVPE 266
+ G A G + +E+L LFH M+ + P
Sbjct: 356 ILGLATHG-------------------------------RAQEALHLFHYMVTQTEIKPN 384
Query: 267 EHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF 326
V L AC ++ G + G+ P+ ++D+ + G ++ A E+
Sbjct: 385 TVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELI 444
Query: 327 NAIS 330
+S
Sbjct: 445 KTMS 448
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 304/544 (55%), Gaps = 40/544 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
++N++I G+ + FL + +H + + +F LKAC S G +H +V
Sbjct: 78 LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K GF+ ++ L+ Y+ G L A ++FDE + VVTWT +F GY + A+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+LF M+ V+P+ ++ VLSAC +GD++ G + + ME+ M+
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ------------- 244
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
++ F T++VN YAKCG +E AR D K++V+WS M+
Sbjct: 245 ------------------KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW----IHQHFVIE 296
GY+ N+ PKE ++LF +M+ + P++ ++V LS+C L L+LG W I +H +
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL- 345
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
++ +ANA++DMYAKCG++ EVF + E+++V N+ I+G A NG K + V
Sbjct: 346 ----TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 357 FDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG 416
F Q +G PD TF+ LL C H GLI +G +F + Y +K EHY CM+DL G
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 417 RTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVL 476
R G+L +AY LI MPM+P WGALL+ CR+ + +LA L++L+P ++G YV
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKV 536
L+NI + +W + VR +M KG+KKIPG+S +E++G+ EFL D+SHP S++IY
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAK 581
Query: 537 LDEI 540
L+++
Sbjct: 582 LEDL 585
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 187/394 (47%), Gaps = 36/394 (9%)
Query: 86 KHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSAC 145
K++ +F + ++ + ++ +G+ + + ++LF + + + + T VL AC
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 146 SQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWT 205
++ ++G +H + K + +LL +Y G L A +LFD + R V +WT
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 206 SMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP 265
++ +GY G + +E++ LF +M+ GV P
Sbjct: 182 ALFSGYTTSG-------------------------------RHREAIDLFKKMVEMGVKP 210
Query: 266 EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
+ + +V VLSAC + L+ G WI + ++ E M + + ++++YAKCG +E A V
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVK-YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 326 FNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
F+++ E+++V+W++MI GYA+N K+ + +F QM KPD + V L++C+ G +
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 386 SEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLN 445
G+ ++R+ + + +ID+ + G + +E+ M + A ++
Sbjct: 330 DLGEWGISLIDRHEFL-TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI-VIMNAAIS 387
Query: 446 ACRMHGNVEL--ARLSACNLLSLDPEDSGIYVLL 477
+G+V+L A L + P+ S LL
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/541 (36%), Positives = 313/541 (57%), Gaps = 35/541 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +IRGY + + A + M RV D +F LKAC LS G VH V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL--KDVVTWTTMFDGYASRNCSELA 119
+LGFD+++ V+NGLI YA L AR VF+ L + +V+WT + YA A
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+E+F+ M + DV+P+ V L++VL+A + + D++ GR +H ++ K + +L +L M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y AKCG + A+ D+ N++ W+AM+
Sbjct: 267 Y-------------------------------AKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+GY++N +E++ +FHEM+ V P+ ++ S +SAC Q+ L +++ +V
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE-YVGRSDY 354
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V +++A++DM+AKCGS+E A VF+ +R++V W++MI GY +G+A++A++++
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G P+D+TF+ LL AC+H G++ EG +F M ++ I P+++HY+C+IDLLGR G
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAG 473
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
L +AYE+I MP+QP WGALL+AC+ H +VEL +A L S+DP ++G YV L+N
Sbjct: 474 HLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSN 533
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
+ A R W V VR M++KG+ K G S VEV G + F V D+SHP+ EEI + ++
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEW 593
Query: 540 I 540
I
Sbjct: 594 I 594
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 193/406 (47%), Gaps = 38/406 (9%)
Query: 54 ESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASR 113
+ +H + LG + LIH + G + AR+VFD+ + W + GY+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 114 NCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLH 173
N + A+ +++ M V P+ T +L ACS + ++MGR VH + + + +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 174 NALLDMYVKCGSLVAARELFD--RMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
N L+ +Y KC L +AR +F+ + R + SWT++V+ YA
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA------------------- 198
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
QN +P E+L++F +M V P+ ALVSVL+A L L G IH
Sbjct: 199 ------------QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
V++ G+ L ++ MYAKCG + A +F+ + NL+ WN+MI+GYA NG A+
Sbjct: 247 S-VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKREHYSC 410
+A+++F +M +PD I+ + ++AC+ G + + + Y Y +Y + S
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY--RDDVFISSA 363
Query: 411 MIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
+ID+ + G + E L+ + W A++ +HG A
Sbjct: 364 LIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN MI GY K A F M+ V D S A+ AC ++ + S++ V
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ + ++ + + LI +A G ++ AR VFD + +DVV W+ M GY + A+
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
L+ M RG V PN+VT + +L AC+ G + G M + + ++D+
Sbjct: 410 SLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLL 469
Query: 181 VKCGSLVAARELFDRMETRD-VFSWTSMVNGYAK 213
+ G L A E+ M + V W ++++ K
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKK 503
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/556 (35%), Positives = 310/556 (55%), Gaps = 35/556 (6%)
Query: 1 MWNTMIRGYRKA--RNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHC 58
+W+++I + N ++F + M R+ V +F LKA +L D H
Sbjct: 69 LWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLR-DSNPFQFHA 127
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
+ K G DS+ VRN LI Y+ G A +FD + KDVVTWT M DG+ +
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASE 187
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
AM F M + V NE+T+++VL A ++ D+ GR VH
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVH-------------------G 228
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
+Y++ G + DVF +S+V+ Y KC ++A++ D+ P +NVV+W+A+
Sbjct: 229 LYLETGRVKC-----------DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTAL 277
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+AGY Q+ + + +F EM+ + V P E L SVLSAC + L+ G +H ++I+
Sbjct: 278 IAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC-YMIKNS 336
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ + T ++D+Y KCG +E A VF + E+N+ +W +MI G+AA+G A+ A ++F
Sbjct: 337 IEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFY 396
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M P+++TF+ +L+AC+HGGL+ EG+ F +M+ + ++PK +HY+CM+DL GR
Sbjct: 397 TMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRK 456
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
GLL+EA LI MPM+P WGAL +C +H + EL + +A ++ L P SG Y LLA
Sbjct: 457 GLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLA 516
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHP-QSEEIYKVL 537
N+ + + W +V RVR M+D+ V K PG S +EV G+ EF+ D+ P +S+++YK L
Sbjct: 517 NLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
Query: 538 DEIFLSSELEDYDTDI 553
D + + L D D+
Sbjct: 577 DTVGVQMRLPDELEDV 592
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 300/507 (59%), Gaps = 22/507 (4%)
Query: 55 SVHCVVRKLGFDSELLVRNGLIHFYADRGW----LKHAREVFDESSLKDVVTWTTMFDGY 110
+H V K G + L ++ F A L +A ++F++ ++ +W T+ G+
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 111 ASRNCSE--LAMELFNLMLRGD-VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
+ + + +A+ LF M+ + VEPN T +VL AC++ G I+ G+++H K
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 168 CSLNLHNALLDMYVKCGSLVAARELF--------------DRMETRDVFSWTSMVNGYAK 213
+ + L+ MYV CG + AR LF R ++ W M++GY +
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 214 CGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSV 273
GD + AR D+ ++VVSW+ M++GYS N K+++++F EM + P LVSV
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 274 LSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERN 333
L A +L L LG W+H + + G+ L +A++DMY+KCG IE A VF + N
Sbjct: 281 LPAISRLGSLELGEWLHL-YAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 334 LVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFY 393
+++W++MI G+A +GQA A++ F +MR G +P D+ ++NLLTACSHGGL+ EG+ YF
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 394 TMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNV 453
M G++P+ EHY CM+DLLGR+GLL EA E I +MP++P + W ALL ACRM GNV
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 454 ELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
E+ + A L+ + P DSG YV L+N+ A++ W +V +R M++K ++K PG SL+++
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519
Query: 514 DGEFKEFLVADESHPQSEEIYKVLDEI 540
DG EF+V D+SHP+++EI +L EI
Sbjct: 520 DGVLHEFVVEDDSHPKAKEINSMLVEI 546
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 179/411 (43%), Gaps = 83/411 (20%)
Query: 2 WNTMIRGYRKARNPN--IAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFEGESVHC 58
WNT+IRG+ ++ IA + F M+ VE + +F LKAC + EG+ +H
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 59 VVRKLGF---------------------------------------------DSELLVRN 73
+ K GF D E+++ N
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 74 GLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEP 133
+I Y G K AR +FD+ + VV+W TM GY+ + A+E+F M +GD+ P
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 134 NEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELF 193
N VTL++VL A S++G +E+G +H E +R L +AL+DMY KCG + A +F
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 194 DRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLK 253
+R+ +V +W++M+NG+A G + +++
Sbjct: 333 ERLPRENVITWSAMINGFAIHG-------------------------------QAGDAID 361
Query: 254 LFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMY 313
F +M AGV P + A +++L+AC + G V G+ P + ++D+
Sbjct: 362 CFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLL 421
Query: 314 AKCGSIEAAAE-VFNAISERNLVSWNSMIAGYAANGQ---AKQAVNVFDQM 360
+ G ++ A E + N + + V W +++ G K+ N+ M
Sbjct: 422 GRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM 472
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 10/253 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI GY A F M + + + + V L A L GE +H
Sbjct: 242 WNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAE 301
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G + ++ + LI Y+ G ++ A VF+ ++V+TW+ M +G+A + A++
Sbjct: 302 DSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAID 361
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLDMY 180
F M + V P++V I +L+ACS G +E GRR M + + + ++D+
Sbjct: 362 CFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLL 421
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENARR----FLDQTPHKN--VV 233
+ G L A E M + D W +++ G++E +R +D PH + V
Sbjct: 422 GRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYV 481
Query: 234 SWSAMLAGYSQNN 246
+ S M A SQ N
Sbjct: 482 ALSNMYA--SQGN 492
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/578 (35%), Positives = 314/578 (54%), Gaps = 40/578 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
++++I KA+ + F RM H + D K C ELS G+ +HCV
Sbjct: 84 FSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSC 143
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G D + V+ + H Y G + AR+VFD S KDVVT + + YA + C E +
Sbjct: 144 VSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVR 203
Query: 122 LFNLMLRGDVE-----------------------------------PNEVTLIAVLSACS 146
+ + M +E P++VT+ +VL +
Sbjct: 204 ILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVG 263
Query: 147 QMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTS 206
+ MGR +H + K+ + + +A++DMY K G + LF++ E + +
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 207 MVNGYAKCGDLENARR----FLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
+ G ++ G ++ A F +QT NVVSW++++AG +QN K E+L+LF EM AG
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
V P + S+L ACG ++ L G H F + + +V + +A++DMYAKCG I +
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHG-FAVRVHLLDNVHVGSALIDMYAKCGRINLS 442
Query: 323 AEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
VFN + +NLV WNS++ G++ +G+AK+ +++F+ + KPD I+F +LL+AC
Sbjct: 443 QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGA 442
GL EG +YF M YGIKP+ EHYSCM++LLGR G L+EAY+LI MP +P WGA
Sbjct: 503 GLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGA 562
Query: 443 LLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGV 502
LLN+CR+ NV+LA ++A L L+PE+ G YVLL+NI A + W +V +R+ M G+
Sbjct: 563 LLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGL 622
Query: 503 KKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
KK PG S ++V L D+SHPQ ++I + +DEI
Sbjct: 623 KKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEI 660
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 200/437 (45%), Gaps = 42/437 (9%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
H + K G ++ + LI Y++ A V + +++++
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
++ +F+ M + P+ L + C+++ ++G+++H + + ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP----HKNV 232
MY++CG + AR++FDRM +DV + ++++ YA+ G LE R L + N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
VSW+ +L+G++++ KE++ +F ++ G P++ + SVL + G LN+G IH
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG- 276
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS---------------------- 330
+VI++G+ + +A++DMY K G + +FN
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 331 -------------ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLT 377
E N+VSW S+IAG A NG+ +A+ +F +M+ G KP+ +T ++L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 378 ACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE 437
AC + + G+ R + + S +ID+ + G + + + MP +
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL- 454
Query: 438 AAWGALLNACRMHGNVE 454
W +L+N MHG +
Sbjct: 455 VCWNSLMNGFSMHGKAK 471
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/501 (39%), Positives = 282/501 (56%), Gaps = 38/501 (7%)
Query: 75 LIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPN 134
L+ YA + AR+VFDE ++V+ M Y + +++F M +V P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 135 EVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFD 194
T VL ACS G I +GR++H + K + +L + N L+ MY KCG L AR + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 195 RMETRDVFSWTSMVNGYAK----------CGDLENARRFLD------------------- 225
M RDV SW S+V GYA+ C ++E+ + D
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 226 --------QTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC 277
+ K++VSW+ M+ Y +N P E+++L+ M G P+ ++ SVL AC
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 278 GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSW 337
G S L+LG IH ++ K + P++ L NA++DMYAKCG +E A +VF + R++VSW
Sbjct: 320 GDTSALSLGKKIHG-YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 338 NSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMER 397
+MI+ Y +G+ AV +F +++ G PD I FV L ACSH GL+ EG+ F M
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Query: 398 NYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
+Y I P+ EH +CM+DLLGR G +KEAY I M M+P E WGALL ACR+H + ++
Sbjct: 439 HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
Query: 458 LSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEF 517
L+A L L PE SG YVLL+NI A +W +V +R++M+ KG+KK PG S VEV+
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558
Query: 518 KEFLVADESHPQSEEIYKVLD 538
FLV D SHPQS+EIY+ LD
Sbjct: 559 HTFLVGDRSHPQSDEIYRELD 579
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 162/383 (42%), Gaps = 46/383 (12%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N MIR Y F M V D +F LKAC G +H K
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK 168
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMEL 122
+G S L V NGL+ Y G+L AR V DE S +DVV+W ++ GYA + A+E+
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 123 FNLMLRGDVEPNEVTLIAVLSACSQMG--DIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
M + + T+ ++L A S ++ + + M KK SL N ++ +Y
Sbjct: 229 CREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK----SLVSWNVMIGVY 284
Query: 181 VKCGSLVAARELFDRMET----RDVFSWTS------------------------------ 206
+K V A EL+ RME D S TS
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 207 -----MVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
+++ YAKCG LE AR + ++VVSW+AM++ Y + + +++ LF ++ +
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
G+VP+ A V+ L+AC L G + + P + ++D+ + G ++
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 322 AAEVFNAIS-ERNLVSWNSMIAG 343
A +S E N W +++
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGA 487
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 149/315 (47%), Gaps = 24/315 (7%)
Query: 161 MEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM----VNGYAKCGD 216
+++K+ + ++ L +LD Y +L R + R+ D+ +S+ + YA D
Sbjct: 33 LDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKD 89
Query: 217 LENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSA 276
+ +AR+ D+ P +NV+ + M+ Y N E +K+F M G V P+ + VL A
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 277 CGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS 336
C + +G IH + G+ ++ + N ++ MY KCG + A V + +S R++VS
Sbjct: 150 CSCSGTIVIGRKIHGS-ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 337 WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTME 396
WNS++ GYA N + A+ V +M + D T +LL A S+ +E Y M
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN--TTTENVMYVKDMF 266
Query: 397 RNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP---MQPCEAAWGALLNAC------ 447
G K ++ MI + + + EA EL + M +P + ++L AC
Sbjct: 267 FKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 448 ----RMHGNVELARL 458
++HG +E +L
Sbjct: 326 SLGKKIHGYIERKKL 340
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI Y K P A + RM E D S L AC + S G+ +H +
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFD--GYASRNCSELA 119
+ LL+ N LI YA G L+ AR+VF+ +DVV+WT M G++ R C +A
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGR 155
LF+ + + P+ + + L+ACS G +E GR
Sbjct: 397 --LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/450 (40%), Positives = 265/450 (58%), Gaps = 1/450 (0%)
Query: 84 WLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLS 143
+L +A+ VFD D W M G++ + E ++ L+ ML N T ++L
Sbjct: 64 FLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK 123
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
ACS + E ++H + K + N+L++ Y G+ A LFDR+ D S
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
W S++ GY K G ++ A + KN +SW+ M++GY Q + KE+L+LFHEM + V
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
P+ +L + LSAC QL L G WIH + + SV L ++DMYAKCG +E A
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEAL 302
Query: 324 EVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGG 383
EVF I ++++ +W ++I+GYA +G ++A++ F +M+ MG KP+ ITF +LTACS+ G
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
L+ EG+ FY+MER+Y +KP EHY C++DLLGR GLL EA I MP++P WGAL
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 444 LNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVK 503
L ACR+H N+EL L+++DP G YV ANI A ++KW R LM+++GV
Sbjct: 423 LKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA 482
Query: 504 KIPGHSLVEVDGEFKEFLVADESHPQSEEI 533
K+PG S + ++G EFL D SHP+ E+I
Sbjct: 483 KVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 166/373 (44%), Gaps = 63/373 (16%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN MIRG+ + P + + RML + +F LKAC LS E +H +
Sbjct: 82 LWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQI 141
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFD--------------------------- 93
KLG+++++ N LI+ YA G K A +FD
Sbjct: 142 TKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIAL 201
Query: 94 ----ESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
+ + K+ ++WTTM GY + ++ A++LF+ M DVEP+ V+L LSAC+Q+G
Sbjct: 202 TLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
+E G+ +H + K +R L L+DMY KCG + A E+F ++ + V +WT++++
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
GYA G +E++ F EM G+ P
Sbjct: 322 GYAYHG-------------------------------HGREAISKFMEMQKMGIKPNVIT 350
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+VL+AC + G I + + P++ I+D+ + G ++ A +
Sbjct: 351 FTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 330 SER-NLVSWNSMI 341
+ N V W +++
Sbjct: 411 PLKPNAVIWGALL 423
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/469 (38%), Positives = 291/469 (62%), Gaps = 3/469 (0%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE-PNEVTLIAVLS 143
+ +A +F++ S +V + ++ Y + + ++ +LR E P+ T +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
+C+ +G +G++VH ++ K R + NAL+DMY+K LV A ++FD M RDV S
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
W S+++GYA+ G ++ A+ K +VSW+AM++GY+ E++ F EM AG+
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
P+E +L+SVL +C QL L LG WIH + +G + NA+++MY+KCG I A
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHL-YAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 324 EVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGG 383
++F + ++++SW++MI+GYA +G A A+ F++M+ KP+ ITF+ LL+ACSH G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
+ EG YF M ++Y I+PK EHY C+ID+L R G L+ A E+ +MPM+P WG+L
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 444 LNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVK 503
L++CR GN+++A ++ +L+ L+PED G YVLLANI A+ KW DV R+R ++R++ +K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 504 KIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
K PG SL+EV+ +EF+ D S P EI VL ++F S + +D T+
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVL-QLFTSHQDQDVITN 524
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 175/403 (43%), Gaps = 66/403 (16%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCR-SFVFALKACEELSGDFEGESVHCV 59
++N++IR Y + ++LR E+ R +F F K+C L + G+ VH
Sbjct: 75 LYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 134
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDV------------------- 100
+ K G ++ N LI Y L A +VFDE +DV
Sbjct: 135 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 194
Query: 101 ------------VTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQM 148
V+WT M GY C AM+ F M +EP+E++LI+VL +C+Q+
Sbjct: 195 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 254
Query: 149 GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV 208
G +E+G+ +H E++ + NAL++MY KCG + A +LF +ME +DV SW++M+
Sbjct: 255 GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMI 314
Query: 209 NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEH 268
+GYA G+ A ++ F+EM A V P
Sbjct: 315 SGYAYHGNAHGA-------------------------------IETFNEMQRAKVKPNGI 343
Query: 269 ALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
+ +LSAC + G + + P + ++D+ A+ G +E A E+
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 329 ISER-NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
+ + + W S+++ G A+ D + + +P+D+
Sbjct: 404 MPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL--VELEPEDM 444
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/514 (36%), Positives = 295/514 (57%), Gaps = 38/514 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NT++ Y P + + + + D +F KAC + SG EG+ +H +V
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K+GF ++ V+N L+HFY G ++A +VF E ++DVV+WT + G+ + A++
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
F+ M DVEPN T + VL + ++G + +G+ +H + K+ SL NAL+DMYV
Sbjct: 194 TFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 250
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K C L +A R + K+ VSW++M++G
Sbjct: 251 K-------------------------------CEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 242 YSQNNKPKESLKLFHEMM-GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
+ KE++ LF M +G+ P+ H L SVLSAC L ++ G W+H+ +++ G+
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHE-YILTAGIK 338
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+ AI+DMYAKCG IE A E+FN I +N+ +WN+++ G A +G +++ F++M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTME-RNYGIKPKREHYSCMIDLLGRTG 419
+GFKP+ +TF+ L AC H GL+ EG+ YF+ M+ R Y + PK EHY CMIDLL R G
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNV-ELARLSACNLLSLDPEDSGIYVLLA 478
LL EA EL+ +MP++P GA+L+AC+ G + EL + + L ++ EDSG+YVLL+
Sbjct: 459 LLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLS 518
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVE 512
NI A R+W DV R+R LM+ KG+ K+PG S +E
Sbjct: 519 NIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 161/355 (45%), Gaps = 44/355 (12%)
Query: 102 TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM 161
++ T+ YA + + + + + P+ T V AC + I G+++H +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 162 EKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENAR 221
K + + N+L+ Y CG A ++F M RDV SWT ++ G+ + G
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY---- 188
Query: 222 RFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLS 281
KE+L F +M V P V VL + G++
Sbjct: 189 ---------------------------KEALDTFSKM---DVEPNLATYVCVLVSSGRVG 218
Query: 282 CLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMI 341
CL+LG IH ++++ S+ NA++DMY KC + A VF + +++ VSWNSMI
Sbjct: 219 CLSLGKGIHG-LILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMI 277
Query: 342 AGYAANGQAKQAVNVFDQMRC-MGFKPDDITFVNLLTACSHGGLISEGQ---EYFYTMER 397
+G ++K+A+++F M+ G KPD ++L+AC+ G + G+ EY T
Sbjct: 278 SGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA-- 335
Query: 398 NYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
GIK + ++D+ + G ++ A E+ + + W ALL +HG+
Sbjct: 336 --GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNV-FTWNALLGGLAIHGH 387
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 10/222 (4%)
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGY----AKCGDLENARRFLDQTPH 229
+ LL++ +C SL +++ ++ TRD+ ++N K D + + +
Sbjct: 7 SVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 230 KNVVSWS--AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
+ S+S +L+ Y+ +KP+ ++ + + G P+ V ACG+ S + G
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAAN 347
IH V + G + + + N+++ Y CG A +VF + R++VSW +I G+
Sbjct: 127 QIHG-IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
G K+A++ F +M +P+ T+V +L + G +S G+
Sbjct: 186 GLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGK 224
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 358 bits (918), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 198/548 (36%), Positives = 320/548 (58%), Gaps = 13/548 (2%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
++NTMI ++N F + M+RHRV D ++F++ +KA LS E + +HC +
Sbjct: 102 VYNTMISAVSSSKNE--CFGLYSSMIRHRVSPDRQTFLYLMKASSFLS---EVKQIHCHI 156
Query: 61 RKLG-FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
G + N L+ FY + G A +VF DV ++ M GYA + S A
Sbjct: 157 IVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEA 216
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL--HNALL 177
++L+ M+ +EP+E T++++L C + DI +G+ VH +E++ S NL NALL
Sbjct: 217 LKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALL 276
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
DMY KC A+ FD M+ +D+ SW +MV G+ + GD+E A+ DQ P +++VSW++
Sbjct: 277 DMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNS 336
Query: 238 MLAGYSQNNKPKESLK-LFHEM-MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
+L GYS+ + +++ LF+EM + V P+ +VS++S L+ G W+H VI
Sbjct: 337 LLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG-LVI 395
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
+ L++A++DMY KCG IE A VF +E+++ W SMI G A +G +QA+
Sbjct: 396 RLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQ 455
Query: 356 VFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLL 415
+F +M+ G P+++T + +LTACSH GL+ EG F M+ +G P+ EHY ++DLL
Sbjct: 456 LFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLL 515
Query: 416 GRTGLLKEAYELI-TSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIY 474
R G ++EA +++ MPM+P ++ WG++L+ACR ++E A L+ LL L+PE G Y
Sbjct: 516 CRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGY 575
Query: 475 VLLANICANERKWGDVKRVRSLMRDKGVKKIPGH-SLVEVDGEFKEFLVADESHPQSEEI 533
VLL+NI A +WG + R M ++GVKK G+ S+V V+G + ++HP+ EI
Sbjct: 576 VLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEI 635
Query: 534 YKVLDEIF 541
++L ++
Sbjct: 636 KRILQHLY 643
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 13/239 (5%)
Query: 223 FLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSC 282
FL+ TP+ NV ++ M++ S + E L+ M+ V P+ + ++ A LS
Sbjct: 91 FLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSE 148
Query: 283 LNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIA 342
+ IH H ++ + L N+++ Y + G+ A +VF + ++ S+N MI
Sbjct: 149 VK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIV 205
Query: 343 GYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIK 402
GYA G + +A+ ++ +M G +PD+ T ++LL C H I G+ +ER +
Sbjct: 206 GYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY 265
Query: 403 PKREHYS-CMIDLLGR---TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
S ++D+ + +GL K A++ + M+ +W ++ G++E A+
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMR----SWNTMVVGFVRLGDMEAAQ 320
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 182/511 (35%), Positives = 294/511 (57%), Gaps = 2/511 (0%)
Query: 40 ALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKD 99
AL C++ VH V + GFDS++ V NG+I +Y ++ AR+VFDE S +D
Sbjct: 138 ALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERD 197
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
VV+W +M GY+ E +++ ML D +PN VT+I+V AC Q D+ G VH
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLE 218
+ M + +++ L+L NA++ Y KCGSL AR LFD M +D ++ ++++GY G ++
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 219 NARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACG 278
A + + +W+AM++G QNN +E + F EM+ G P L S+L +
Sbjct: 318 EAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLT 377
Query: 279 QLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWN 338
S L G IH F I G ++ + +I+D YAK G + A VF+ +R+L++W
Sbjct: 378 YSSNLKGGKEIHA-FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWT 436
Query: 339 SMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERN 398
++I YA +G + A ++FDQM+C+G KPDD+T +L+A +H G Q F +M
Sbjct: 437 AIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 496
Query: 399 YGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARL 458
Y I+P EHY+CM+ +L R G L +A E I+ MP+ P WGALLN + G++E+AR
Sbjct: 497 YDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARF 556
Query: 459 SACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFK 518
+ L ++PE++G Y ++AN+ +W + + VR+ M+ G+KKIPG S +E + +
Sbjct: 557 ACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLR 616
Query: 519 EFLVADESHPQSEEIYKVLDEIFLSSELEDY 549
F+ D S +S+E+Y++++ + S ++Y
Sbjct: 617 SFIAKDSSCERSKEMYEIIEGLVESMSDKEY 647
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 215/472 (45%), Gaps = 89/472 (18%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
+H + + + + LI FY + + A VFDE ++++ ++ + Y SR
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR-- 101
Query: 116 SELAMELFNLMLR---------GDVEPNEVTLIAVLSACSQMGDIEMG---RRVHENMEK 163
E+ + F+L L P+ +++ VL A S D +G R+VH + +
Sbjct: 102 -EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 164 KNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRF 223
+ + N ++ Y KC ++ +AR++FD M RDV SW SM++GY++ G E+ ++
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 224 LDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL 283
+ AMLA + KP GV ++SV ACGQ S L
Sbjct: 221 -----------YKAMLA--CSDFKPN------------GVT-----VISVFQACGQSSDL 250
Query: 284 NLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAG 343
G +H+ +IE + ++L NA++ YAKCGS++ A +F+ +SE++ V++ ++I+G
Sbjct: 251 IFGLEVHKK-MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISG 309
Query: 344 YAANGQAKQAVNVFDQMRCMGF-------------------------------KPDDITF 372
Y A+G K+A+ +F +M +G +P+ +T
Sbjct: 310 YMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTL 369
Query: 373 VNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP 432
+LL + ++ + G+E RN G + +ID + G L A + +
Sbjct: 370 SSLLPSLTYSSNLKGGKEIHAFAIRN-GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Query: 433 MQPCEAAWGALLNACRMHGNVELARLSACNL------LSLDPEDSGIYVLLA 478
+ AW A++ A +HG+ + SAC+L L P+D + +L+
Sbjct: 429 DRSL-IAWTAIITAYAVHGDSD----SACSLFDQMQCLGTKPDDVTLTAVLS 475
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 186/408 (45%), Gaps = 50/408 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLR-HRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN+MI GY ++ + + ML + + + + +AC + S G VH +
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ +L + N +I FYA G L +AR +FDE S KD VT+ + GY + + AM
Sbjct: 261 IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAM 320
Query: 121 ELF-----------NLMLRGDVE--------------------PNEVTLIAVLSACSQMG 149
LF N M+ G ++ PN VTL ++L + +
Sbjct: 321 ALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSS 380
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
+++ G+ +H + ++ + +++D Y K G L+ A+ +FD + R + +WT+++
Sbjct: 381 NLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Query: 210 GYAKCGDLENARRFLDQT----PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA-GVV 264
YA GD ++A DQ + V+ +A+L+ ++ + + +F M+ +
Sbjct: 441 AYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE 500
Query: 265 P--EEHA-LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
P E +A +VSVLS G+LS F+ + + P + A+L+ + G +E
Sbjct: 501 PGVEHYACMVSVLSRAGKLS-------DAMEFISKMPIDPIAKVWGALLNGASVLGDLEI 553
Query: 322 AAEVFNAISE---RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFK 366
A + + E N ++ M Y G+ ++A V ++M+ +G K
Sbjct: 554 ARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLK 601
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/543 (35%), Positives = 308/543 (56%), Gaps = 17/543 (3%)
Query: 13 RNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVR 72
R+P+ S LR+ R + + + L++C+ ++ S+H + + D + V
Sbjct: 17 RDPD---SNTLRLSRRK------TLISVLRSCKNIA---HVPSIHAKIIRTFHDQDAFVV 64
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE 132
LI + + +A +VF S +V +T M DG+ S S + L++ M+ V
Sbjct: 65 FELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVL 124
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
P+ + +VL AC D+++ R +H + K S ++ ++++Y K G LV A+++
Sbjct: 125 PDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKM 180
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
FD M RD + T M+N Y++CG ++ A K+ V W+AM+ G +N + ++L
Sbjct: 181 FDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKAL 240
Query: 253 KLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDM 312
+LF EM V E V VLSAC L L LG W+H FV + M S + NA+++M
Sbjct: 241 ELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHS-FVENQRMELSNFVGNALINM 299
Query: 313 YAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITF 372
Y++CG I A VF + +++++S+N+MI+G A +G + +A+N F M GF+P+ +T
Sbjct: 300 YSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTL 359
Query: 373 VNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP 432
V LL ACSHGGL+ G E F +M+R + ++P+ EHY C++DLLGR G L+EAY I ++P
Sbjct: 360 VALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP 419
Query: 433 MQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKR 492
++P G LL+AC++HGN+EL A L + DSG YVLL+N+ A+ KW +
Sbjct: 420 IEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTE 479
Query: 493 VRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
+R MRD G++K PG S +EVD + EFLV D +HP E IY+ L E+ ++ D
Sbjct: 480 IRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQID 539
Query: 553 IFV 555
I +
Sbjct: 540 IIM 542
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 185/463 (39%), Gaps = 104/463 (22%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCV 59
++ MI G+ + S + RM+ + V D LKAC D + +H
Sbjct: 94 LYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC-----DLKVCREIHAQ 148
Query: 60 VRKLGFDS---------ELLVRNG----------------------LIHFYADRGWLKHA 88
V KLGF S E+ ++G +I+ Y++ G++K A
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 89 REVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQM 148
E+F + +KD V WT M DG A+ELF M +V NE T + VLSACS +
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDL 268
Query: 149 GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV 208
G +E+GR VH +E + M S + NAL++MY +CG + AR +F M +DV S+ +M+
Sbjct: 269 GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMI 328
Query: 209 NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEH 268
+G A G E++ F +M+ G P +
Sbjct: 329 SGLAMHG-------------------------------ASVEAINEFRDMVNRGFRPNQV 357
Query: 269 ALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
LV++L+AC L++G + + P + I+D+ + G +E A
Sbjct: 358 TLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIEN 417
Query: 329 ISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG 388
I +PD I LL+AC G + G
Sbjct: 418 IP----------------------------------IEPDHIMLGTLLSACKIHGNMELG 443
Query: 389 QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
++ + + P Y + +L +G KE+ E+ SM
Sbjct: 444 EKIAKRLFESE--NPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 11/298 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI G + + N A F M V + + V L AC +L G VH V
Sbjct: 223 WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVE 282
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ V N LI+ Y+ G + AR VF KDV+++ TM G A S A+
Sbjct: 283 NQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAIN 342
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMY 180
F M+ PN+VTL+A+L+ACS G +++G V +M++ N+ + + ++D+
Sbjct: 343 EFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLL 402
Query: 181 VKCGSLVAARELFDR--METRDVFSWTSM----VNGYAKCGDLENARRFLDQTPHKNVVS 234
+ G L A + +E + T + ++G + G+ R F + P
Sbjct: 403 GRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYV 462
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
+ L Y+ + K KES ++ M +G+ E+ S + Q+ +G H H
Sbjct: 463 LLSNL--YASSGKWKESTEIRESMRDSGI--EKEPGCSTIEVDNQIHEFLVGDIAHPH 516
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 354 bits (909), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 190/517 (36%), Positives = 295/517 (57%), Gaps = 43/517 (8%)
Query: 28 HRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSE---LLVRNGLIHFYADRGW 84
H + D ++ +K C EG + + R L F+ + + N LI+ Y
Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEG---NLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L A ++FD+ ++V++WTTM Y+ + A+EL LMLR +V PN T +VL +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
C+ M D+ M LH CG + E DVF
Sbjct: 172 CNGMSDVRM------------------LH---------CGIIKEGLE-------SDVFVR 197
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
+++++ +AK G+ E+A D+ + + W++++ G++QN++ +L+LF M AG +
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAE 324
E+ L SVL AC L+ L LG H H V + L NA++DMY KCGS+E A
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIV---KYDQDLILNNALVDMYCKCGSLEDALR 314
Query: 325 VFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
VFN + ER++++W++MI+G A NG +++A+ +F++M+ G KP+ IT V +L ACSH GL
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALL 444
+ +G YF +M++ YGI P REHY CMIDLLG+ G L +A +L+ M +P W LL
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 445 NACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKK 504
ACR+ N+ LA +A +++LDPED+G Y LL+NI AN +KW V+ +R+ MRD+G+KK
Sbjct: 435 GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK 494
Query: 505 IPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIF 541
PG S +EV+ + F++ D SHPQ E+ K L+++
Sbjct: 495 EPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLI 531
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 189/402 (47%), Gaps = 39/402 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W TMI Y K + A + MLR V + ++ L++C +S + +HC +
Sbjct: 130 WTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS---DVRMLHCGII 186
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G +S++ VR+ LI +A G + A VFDE D + W ++ G+A + S++A+E
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF M R + TL +VL AC+ + +E+G + H ++ K + L L+NAL+DMY
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYC 304
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KCGSL A +F++M+ RDV +W++M++G A+ G
Sbjct: 305 KCGSLEDALRVFNQMKERDVITWSTMISGLAQ--------------------------NG 338
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
YSQ E+LKLF M +G P +V VL AC L G + + G+ P
Sbjct: 339 YSQ-----EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
++D+ K G ++ A ++ N + E + V+W +++ A Q + +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG--ACRVQRNMVLAEYAAK 451
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIK 402
+ + P+D LL+ + E T R+ GIK
Sbjct: 452 KVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIK 493
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 4/212 (1%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN++I G+ + ++A F RM R + + L+AC L+ G H +
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K +D +L++ N L+ Y G L+ A VF++ +DV+TW+TM G A S+ A+
Sbjct: 287 VK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLH-NALLDM 179
+LF M +PN +T++ VL ACS G +E G +M+K + H ++D+
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 404
Query: 180 YVKCGSLVAARELFDRMETR-DVFSWTSMVNG 210
K G L A +L + ME D +W +++
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 296/541 (54%), Gaps = 34/541 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +R + + S + MLR D SF F LK+C LS G+ +HC V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDES--SLKDVVTWTTMFDGYASRNCSELA 119
K G ++E V LI Y G + AR+VF+E+ S + V + + GY + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+F M V + VT++ ++ C+ + +GR +H K + + + N+ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y+K CG +E RR D+ P K +++W+A++
Sbjct: 201 YMK-------------------------------CGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+GYSQN + L+L+ +M +GV P+ LVSVLS+C L +GH + + V G
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK-LVESNGF 288
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
P+V ++NA + MYA+CG++ A VF+ + ++LVSW +MI Y +G + + +FD
Sbjct: 289 VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDD 348
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G +PD FV +L+ACSH GL +G E F M+R Y ++P EHYSC++DLLGR G
Sbjct: 349 MIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 408
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
L EA E I SMP++P A WGALL AC++H NV++A L+ ++ +P + G YVL++N
Sbjct: 409 RLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSN 468
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
I ++ + + R+R +MR++ +K PG+S VE G FL D SH Q+EE++++LDE
Sbjct: 469 IYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDE 528
Query: 540 I 540
+
Sbjct: 529 L 529
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 287/464 (61%), Gaps = 7/464 (1%)
Query: 79 YADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTL 138
YA G ++H+ +F ++ D+ +T + + + A L+ +L ++ PNE T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 139 IAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET 198
++L +CS + G+ +H ++ K + + L+D+Y K G +V+A+++FDRM
Sbjct: 134 SSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 199 RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM 258
R + S T+M+ YAK G++E AR D +++VSW+ M+ GY+Q+ P ++L LF ++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 259 MGAGVV-PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
+ G P+E +V+ LSAC Q+ L G WIH FV + +V + ++DMY+KCG
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHV-FVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 318 SIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCM-GFKPDDITFVNLL 376
S+E A VFN +++V+WN+MIAGYA +G ++ A+ +F++M+ + G +P DITF+ L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
AC+H GL++EG F +M + YGIKPK EHY C++ LLGR G LK AYE I +M M
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
W ++L +C++HG+ L + A L+ L+ ++SGIYVLL+NI A+ + V +VR+L
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 497 MRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
M++KG+ K PG S +E++ + EF D H +S+EIY +L +I
Sbjct: 489 MKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKI 532
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 167/365 (45%), Gaps = 69/365 (18%)
Query: 18 AFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIH 77
AF ++++L + + +F LK+C SG +H V K G + V GL+
Sbjct: 114 AFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKL----IHTHVLKFGLGIDPYVATGLVD 169
Query: 78 FYADRGWLKHAREVFD---ESSL----------------------------KDVVTWTTM 106
YA G + A++VFD E SL +D+V+W M
Sbjct: 170 VYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVM 229
Query: 107 FDGYASRNCSELAMELFN-LMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN 165
DGYA A+ LF L+ G +P+E+T++A LSACSQ+G +E GR +H ++
Sbjct: 230 IDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR 289
Query: 166 MRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLD 225
+R ++ + L+DMY KCGSL A +F+ +D+ +W +M+ GYA
Sbjct: 290 IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA------------- 336
Query: 226 QTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG-AGVVPEEHALVSVLSACGQLSCLN 284
+ GYSQ ++L+LF+EM G G+ P + + L AC +N
Sbjct: 337 -------------MHGYSQ-----DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVN 378
Query: 285 LGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAG 343
G I + E G+ P + ++ + + G ++ A E ++ + + V W+S++
Sbjct: 379 EGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS 438
Query: 344 YAANG 348
+G
Sbjct: 439 CKLHG 443
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 6/221 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRH-RVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN MI GY + PN A F ++L + + D + V AL AC ++ G +H V
Sbjct: 226 WNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV 285
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ + V GLI Y+ G L+ A VF+++ KD+V W M GYA S+ A+
Sbjct: 286 KSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDAL 345
Query: 121 ELFNLM--LRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALL 177
LFN M + G ++P ++T I L AC+ G + G R+ E+M ++ ++ + + L+
Sbjct: 346 RLFNEMQGITG-LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLV 404
Query: 178 DMYVKCGSLVAARELFDRMET-RDVFSWTSMVNGYAKCGDL 217
+ + G L A E M D W+S++ GD
Sbjct: 405 SLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 352 bits (903), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 304/551 (55%), Gaps = 45/551 (8%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFAL--KACEELSGDFEGESVHCVV 60
N+MI+ Y + R +F+ + R LR +F F K+C ++G +H +
Sbjct: 46 NSMIKAYLETRQYPDSFALY-RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQI 104
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ GF +++ V G++ YA G + AR FDE + V+WT + GY
Sbjct: 105 WRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYI--------- 155
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+ G++++ ++ + M + ++NA++D +
Sbjct: 156 --------------------------RCGELDLASKLFDQMPHVK---DVVIYNAMMDGF 186
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
VK G + +AR LFD M + V +WT+M++GY D++ AR+ D P +N+VSW+ M+
Sbjct: 187 VKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIG 246
Query: 241 GYSQNNKPKESLKLFHEMMGAGVV-PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
GY QN +P+E ++LF EM + P++ ++SVL A L+LG W H FV K +
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHC-FVQRKKL 305
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V + AILDMY+KCG IE A +F+ + E+ + SWN+MI GYA NG A+ A+++F
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M + KPD+IT + ++TAC+HGGL+ EG+++F+ M R G+ K EHY CM+DLLGR G
Sbjct: 366 MM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAG 423
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
LKEA +LIT+MP +P + L+AC + ++E A + L+P++ G YVLL N
Sbjct: 424 SLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRN 483
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
+ A +++W D V+++MR KK G SL+E++ EF+ D +HP I+ VL +
Sbjct: 484 LYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGD 543
Query: 540 IFLSSELEDYD 550
+ + E Y+
Sbjct: 544 LLMHMNEEKYN 554
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 3/227 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRM-LRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WNTMI GY + + P F M ++ D + + L A + GE HC V
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
++ D ++ V ++ Y+ G ++ A+ +FDE K V +W M GYA + A+
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAAL 360
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+LF M+ + +P+E+T++AV++AC+ G +E GR+ M + + + + ++D+
Sbjct: 361 DLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLL 419
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENARRFLDQ 226
+ GSL A +L M + +S ++ + D+E A R L +
Sbjct: 420 GRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKK 466
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 15/266 (5%)
Query: 220 ARRFLDQTPHKNVVSWS-AMLAGYSQNNKPKESLKLFHEMMGAG-VVPEEHALVSVLSAC 277
AR+ DQ P ++ S +M+ Y + + +S L+ ++ P+ ++ +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 278 GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSW 337
C+ G +H + G + ++ ++DMYAK G + A F+ + R+ VSW
Sbjct: 89 SLSMCVYQGLQLHSQ-IWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 338 NSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMER 397
++I+GY G+ A +FDQM + D + + ++ G ++ + F M
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTH 204
Query: 398 NYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA-CRMHGNVELA 456
I ++ MI + A +L +MP + +W ++ C+ E
Sbjct: 205 KTVIT-----WTTMIHGYCNIKDIDAARKLFDAMPERNL-VSWNTMIGGYCQNKQPQEGI 258
Query: 457 RL--SACNLLSLDPEDSGIYVLLANI 480
RL SLDP+D I +L I
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAI 284
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 351 bits (901), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 325/621 (52%), Gaps = 73/621 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W T+I GY + + + F+RM + + +F AL E G VH VV
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G D + V N LI+ Y G ++ AR +FD++ +K VVTW +M GYA+ A+
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F M V +E + +V+ C+ + ++ ++H ++ K N+ AL+ Y
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 182 KC----------------GSLVA----------------ARELFDRMETRDV----FSW- 204
KC G++V+ A +LF M+ + V F++
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401
Query: 205 ------------------------------TSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
T++++ Y K G +E A + K++V+
Sbjct: 402 VILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH-F 293
WSAMLAGY+Q + + ++K+F E+ G+ P E S+L+ C + ++G H F
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA-SMGQGKQFHGF 520
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
I+ + S+ +++A+L MYAK G+IE+A EVF E++LVSWNSMI+GYA +GQA +A
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMID 413
++VF +M+ K D +TF+ + AC+H GL+ EG++YF M R+ I P +EH SCM+D
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 640
Query: 414 LLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI 473
L R G L++A ++I +MP W +L ACR+H EL RL+A ++++ PEDS
Sbjct: 641 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA 700
Query: 474 YVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEI 533
YVLL+N+ A W + +VR LM ++ VKK PG+S +EV + FL D SHP ++I
Sbjct: 701 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI 760
Query: 534 YKVLDEIFLSSELED--YDTD 552
Y L++ LS+ L+D Y+ D
Sbjct: 761 YMKLED--LSTRLKDLGYEPD 779
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 240/526 (45%), Gaps = 89/526 (16%)
Query: 4 TMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKL 63
+++ G+ + A FL + R +EMDC F LK L + G +HC K
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF 122
Query: 64 GFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELF 123
GF ++ V L+ Y K R+VFDE ++VVTWTT+ GYA + ++ + LF
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC 183
M +PN T A L ++ G G +VH + K + ++ + N+L+++Y+KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 184 GSLVAARELFDRMETRDVFSWTSMVNGYAKCG-DLE------------------------ 218
G++ AR LFD+ E + V +W SM++GYA G DLE
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 219 ------NARRFLDQTPHKNVVSW---------SAMLAGYSQ------------------- 244
RF +Q H +VV + +A++ YS+
Sbjct: 303 KLCANLKELRFTEQL-HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 245 ------------NNKPKE-SLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
N KE ++ LF EM GV P E +L+A +S +H
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHA 417
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
V++ S T+ A+LD Y K G +E AA+VF+ I ++++V+W++M+AGYA G+ +
Sbjct: 418 Q-VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTAC-SHGGLISEGQEYFYTMERNYGIKPKREHYSC 410
A+ +F ++ G KP++ TF ++L C + + +G+++ + IK + + C
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGFAIKSRLDSSLC 531
Query: 411 ----MIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
++ + + G ++ A E+ + +W ++++ HG
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDL-VSWNSMISGYAQHGQ 576
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 148/297 (49%), Gaps = 32/297 (10%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L +A +FD+S +D ++ ++ G++ ++ A LF + R +E + +VL
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
+ + D GR++H +C +K G L DV
Sbjct: 103 SATLCDELFGRQLH-------CQC------------IKFGFL------------DDVSVG 131
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
TS+V+ Y K + ++ R+ D+ +NVV+W+ +++GY++N+ E L LF M G
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAE 324
P + L + G +H V++ G+ ++ ++N+++++Y KCG++ A
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHT-VVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 325 VFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
+F+ +++V+WNSMI+GYAANG +A+ +F MR + + +F +++ C++
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
G L NA D++P ++ S+ ++L G+S++ + +E+ +LF + G+ +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
SVL L G +H I+ G V++ +++D Y K + + +VF+ +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQ-CIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
ERN+V+W ++I+GYA N + + +F +M+ G +P+ TF L + G+ G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRM 449
+ + +N G+ + +I+L + G +++A L ++ W ++++
Sbjct: 215 QVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV-VTWNSMISGYAA 272
Query: 450 HG 451
+G
Sbjct: 273 NG 274
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 351 bits (900), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 200/578 (34%), Positives = 319/578 (55%), Gaps = 40/578 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W TMI GY+ + A M++ +E + L + G+ VH +
Sbjct: 114 WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV 173
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFD---------------------------- 93
KLG + V N L++ YA G A+ VFD
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 94 ---ESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDV-EPNEVTLIAVLSACSQMG 149
+ + +D+VTW +M G+ R A+++F+ MLR + P+ TL +VLSAC+ +
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRD--VFSWTSM 207
+ +G+++H ++ S + NAL+ MY +CG + AR L ++ T+D + +T++
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
++GY K GD+ A+ ++VV+W+AM+ GY Q+ E++ LF M+G G P
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS 413
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
+ L ++LS L+ L+ G IH ++ G SV+++NA++ MYAK G+I +A+ F+
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGS-AVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 328 AIS-ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
I ER+ VSW SMI A +G A++A+ +F+ M G +PD IT+V + +AC+H GL++
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
+G++YF M+ I P HY+CM+DL GR GLL+EA E I MP++P WG+LL+A
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Query: 447 CRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIP 506
CR+H N++L +++A LL L+PE+SG Y LAN+ + KW + ++R M+D VKK
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 507 GHSLVEVDGEFKEFLVADESHPQSEEIY----KVLDEI 540
G S +EV + F V D +HP+ EIY K+ DEI
Sbjct: 653 GFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEI 690
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 240/515 (46%), Gaps = 100/515 (19%)
Query: 42 KACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK--- 98
K+ + +G F + VHC V K G + + N L++ Y+ G+ HAR++FDE L+
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 99 ----------------------------DVVTWTTMFDGYASRNCSELAMELFNLMLRGD 130
D V+WTTM GY + A+ + M++
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 131 VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAR 190
+EP + TL VL++ + +E G++VH + K +R ++++ N+LL+MY KCG + A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 191 ELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKE 250
+FDRM RD+ SW +M+ + + G ++ A +Q +++V+W++M++G++Q
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 251 SLKLFHEMMGAGVV-PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAI 309
+L +F +M+ ++ P+ L SVLSAC L L +G IH H ++ G S + NA+
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH-IVTTGFDISGIVLNAL 320
Query: 310 LDMYAKCGSIEA---------------------------------AAEVFNAISERNLVS 336
+ MY++CG +E A +F ++ +R++V+
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 337 WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS-----------HGGLI 385
W +MI GY +G +A+N+F M G +P+ T +L+ S HG +
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 386 SEGQEY-------FYTMERNYG-----------IKPKRE--HYSCMIDLLGRTGLLKEAY 425
G+ Y TM G I+ +R+ ++ MI L + G +EA
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 426 ELITSMPMQ---PCEAAWGALLNACRMHGNVELAR 457
EL +M M+ P + + +AC G V R
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 305/549 (55%), Gaps = 33/549 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI GY ++ + ++F M+ V D +F L + + + +HC +
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ ++ + + LI Y + A+ +F + + DVV +T M GY ++E
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F +++ + PNE+TL+++L + +++GR +H + KK N+ A++DMY
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMY- 486
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
AKCG + A ++ +++VSW++M+
Sbjct: 487 ------------------------------AKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
+Q++ P ++ +F +M +G+ + ++ + LSAC L + G IH F+I+ +
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG-FMIKHSLAS 575
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM- 360
V + ++DMYAKCG+++AA VF + E+N+VSWNS+IA +G+ K ++ +F +M
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
G +PD ITF+ ++++C H G + EG +F +M +YGI+P++EHY+C++DL GR G
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
L EAYE + SMP P WG LL ACR+H NVELA +++ L+ LDP +SG YVL++N
Sbjct: 696 LTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNA 755
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
AN R+W V +VRSLM+++ V+KIPG+S +E++ F+ D +HP+S IY +L+ +
Sbjct: 756 HANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Query: 541 FLSSELEDY 549
LE Y
Sbjct: 816 LGELRLEGY 824
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 241/522 (46%), Gaps = 47/522 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKAC-EELSGDFEGESVHCV 59
+WN M+ GY K + F M ++ + +F L C +L D G +H +
Sbjct: 206 IWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL-GVQLHGL 264
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V G D E ++N L+ Y+ G A ++F S D VTW M GY E +
Sbjct: 265 VVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES 324
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ F M+ V P+ +T ++L + S+ ++E +++H + MR S++L
Sbjct: 325 LTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI----MRHSISL------- 373
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
D+F +++++ Y KC + A+ Q +VV ++AM+
Sbjct: 374 --------------------DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+GY N +SL++F ++ + P E LVS+L G L L LG +H F+I+KG
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG-FIIKKGF 472
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ A++DMYAKCG + A E+F +S+R++VSWNSMI A + A+++F Q
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 532
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G D ++ L+AC++ S G+ M + + + S +ID+ + G
Sbjct: 533 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCG 591
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI---YVL 476
LK A + +M + +W +++ AC HG + + S C L E SGI +
Sbjct: 592 NLKAAMNVFKTMKEKNI-VSWNSIIAACGNHGKL---KDSLC-LFHEMVEKSGIRPDQIT 646
Query: 477 LANICANERKWGD----VKRVRSLMRDKGVKKIPGHSLVEVD 514
I ++ GD V+ RS+ D G++ H VD
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVD 688
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 212/458 (46%), Gaps = 40/458 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEG-ESVHCVV 60
WN++I + + N A +++ +ML V D +F +KAC L +F+G + + V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK-NFKGIDFLSDTV 164
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
LG D V + LI Y + G + ++FD KD V W M +GYA + +
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+ F++M + PN VT VLS C+ I++G ++H + + ++ N+LL MY
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCG A +LF M D +W M++GY + G +E
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME---------------------- 322
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
ESL F+EM+ +GV+P+ S+L + + L IH +++ +
Sbjct: 323 ---------ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIH-CYIMRHSIS 372
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+ L +A++D Y KC + A +F+ + ++V + +MI+GY NG ++ +F +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKREHYSC-MIDLLGRT 418
+ P++IT V++L + G+E + + +++ + R + C +ID+ +
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD---NRCNIGCAVIDMYAKC 489
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
G + AYE+ + + +W +++ C N A
Sbjct: 490 GRMNLAYEIFERLSKRDI-VSWNSMITRCAQSDNPSAA 526
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 151/371 (40%), Gaps = 77/371 (20%)
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
P ++L+ L ACS + G++VH + ++ +L MY CGS ++
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
F R++ R ++ W+++++ + +N ++L
Sbjct: 93 FYRLDLR-----------------------------RSSIRPWNSIISSFVRNGLLNQAL 123
Query: 253 KLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDM 312
+ +M+ GV P+ ++ AC L G V GM + +A++++
Sbjct: 124 AFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTVSSLGMDCNEFVASSLIKA 182
Query: 313 YAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITF 372
Y + G I+ +++F+ + +++ V WN M+ GYA G + F MR P+ +TF
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 373 VNLLTACS-----------HGGLISEGQEY------------------------FYTMER 397
+L+ C+ HG ++ G ++ F M R
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 398 NYGIKPKREHYSCMIDLLGRTGLLKEA----YELITSMPMQPCEAAWGALLNACRMHGNV 453
+ ++CMI ++GL++E+ YE+I+S + P + +LL + N+
Sbjct: 303 ADTVT-----WNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENL 356
Query: 454 ELARLSACNLL 464
E + C ++
Sbjct: 357 EYCKQIHCYIM 367
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 293/526 (55%), Gaps = 37/526 (7%)
Query: 2 WNTMIRGYRKARNPN-IAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+N MIRG N + A S + RM ++ D ++ F AC +L G SVH +
Sbjct: 99 FNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSL 158
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K+G + ++ + + LI YA G + +AR++FDE + +D V+W +M GY+ ++ AM
Sbjct: 159 FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAM 218
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+LF M EP+E TL+++L ACS +GD+ GR + E K + S L + L+ MY
Sbjct: 219 DLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMY 278
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCGDL++ARR +Q K+ V+W+AM+
Sbjct: 279 -------------------------------GKCGDLDSARRVFNQMIKKDRVAWTAMIT 307
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
YSQN K E+ KLF EM GV P+ L +VLSACG + L LG I H E +
Sbjct: 308 VYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH-ASELSLQ 366
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
++ +A ++DMY KCG +E A VF A+ +N +WN+MI YA G AK+A+ +FD+M
Sbjct: 367 HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
P DITF+ +L+AC H GL+ +G YF+ M +G+ PK EHY+ +IDLL R G+
Sbjct: 427 SV---PPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGM 483
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSL-DPEDSGIYVLLAN 479
L EA+E + P +P E A+L AC +V + + L+ + + +++G YV+ +N
Sbjct: 484 LDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSN 543
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADE 525
+ A+ + W + ++R+LMRD+GV K PG S +E++GE EFL +
Sbjct: 544 VLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSD 589
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 35/321 (10%)
Query: 171 NLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK 230
+L L + KC S+ R++ +M V ++ + GD + T
Sbjct: 35 DLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEP 94
Query: 231 NVVSWSAMLAGYSQN-NKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
N S++ M+ G + N + +L L+ M +G+ P++ V AC +L + +G +
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQ 349
H + + G+ V + ++++ MYAKCG + A ++F+ I+ER+ VSWNSMI+GY+ G
Sbjct: 155 HSS-LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG---QEYFYTMERN-------- 398
AK A+++F +M GF+PD+ T V++L ACSH G + G +E T +
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 399 ----YG---------------IKPKREHYSCMIDLLGRTGLLKEAYELITSMP---MQPC 436
YG IK R ++ MI + + G EA++L M + P
Sbjct: 274 LISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPD 333
Query: 437 EAAWGALLNACRMHGNVELAR 457
+L+AC G +EL +
Sbjct: 334 AGTLSTVLSACGSVGALELGK 354
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 348 bits (894), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 191/540 (35%), Positives = 299/540 (55%), Gaps = 33/540 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++I GY S F++ML +E+D + V C + G +VH +
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K F E N L+ Y+ G L A+ VF E S + VV++T+M GYA + A++
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF M + P+ T+ AVL+ C++ ++ G+RVHE +++ ++ + + NAL+DMY
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY- 442
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
AKCG ++ A + K+++SW+ ++ G
Sbjct: 443 ------------------------------AKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 242 YSQNNKPKESLKLFHEMMGAG-VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
YS+N E+L LF+ ++ P+E + VL AC LS + G IH +++ G
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG-YIMRNGYF 531
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+AN+++DMYAKCG++ A +F+ I+ ++LVSW MIAGY +G K+A+ +F+QM
Sbjct: 532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
R G + D+I+FV+LL ACSH GL+ EG +F M I+P EHY+C++D+L RTG
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGD 651
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
L +AY I +MP+ P WGALL CR+H +V+LA A + L+PE++G YVL+ANI
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 711
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
A KW VKR+R + +G++K PG S +E+ G F+ D S+P++E I L ++
Sbjct: 712 YAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 228/452 (50%), Gaps = 35/452 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN ++ K+ + + + F +M+ VEMD +F K+ L GE +H +
Sbjct: 162 FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K GF V N L+ FY + AR+VFDE + +DV++W ++ +GY S +E +
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+F ML +E + T+++V + C+ I +GR VH K N LLDMY
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCG L +A+ +F M R V S+TSM+ GYA+ G LA
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-----------------------LA 378
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
G E++KLF EM G+ P+ + + +VL+ C + L+ G +H+ ++ E +
Sbjct: 379 G--------EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLG 429
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD-Q 359
+ ++NA++DMYAKCGS++ A VF+ + ++++SWN++I GY+ N A +A+++F+
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
+ F PD+ T +L AC+ +G+E + RN G R + ++D+ + G
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCG 548
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
L A+ L + + +W ++ MHG
Sbjct: 549 ALLLAHMLFDDIASKDL-VSWTVMIAGYGMHG 579
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 207/445 (46%), Gaps = 38/445 (8%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
NT +R R + N+ + L + + ++D R+ L+ C + +G+ V +R
Sbjct: 65 NTQLR--RFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMEL 122
GF + + + L Y + G LK A VFDE ++ + W + + A ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 123 FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK 182
F M+ VE + T V + S + + G ++H + K ++ N+L+ Y+K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
+ +AR++FD M RDV SW S++NGY
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYV------------------------------ 272
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
N ++ L +F +M+ +G+ + +VSV + C ++LG +H ++
Sbjct: 273 -SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS-IGVKACFSRE 330
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
N +LDMY+KCG +++A VF +S+R++VS+ SMIAGYA G A +AV +F++M
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G PD T +L C+ L+ EG+ + + E + G + ++D+ + G +
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSM 448
Query: 422 KEAYELITSMPMQPCEAAWGALLNA 446
+EA + + M ++ +W ++
Sbjct: 449 QEAELVFSEMRVKDI-ISWNTIIGG 472
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 164/360 (45%), Gaps = 57/360 (15%)
Query: 91 VFDESSLK---DVVTWTTMFDGYASRNCSEL-----------AMELFNLMLRGDVEPNEV 136
+F+ +SL+ D V T FD + ++L A++L + + D++P
Sbjct: 38 IFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR-- 95
Query: 137 TLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM 196
TL +VL C+ ++ G+ V D +++ V L ++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEV--------------------DNFIRGNGFVIDSNLGSKL 135
Query: 197 ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFH 256
Y CGDL+ A R D+ + + W+ ++ +++ S+ LF
Sbjct: 136 SLM-----------YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFK 184
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
+MM +GV + + V + L ++ G +H F+++ G ++ N+++ Y K
Sbjct: 185 KMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG-FILKSGFGERNSVGNSLVAFYLKN 243
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
+++A +VF+ ++ER+++SWNS+I GY +NG A++ ++VF QM G + D T V++
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKP--KREHYSC--MIDLLGRTGLLKEAYELITSMP 432
C+ LIS G+ + G+K RE C ++D+ + G L A + M
Sbjct: 304 AGCADSRLISLGRAV-----HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 348 bits (893), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/466 (36%), Positives = 280/466 (60%), Gaps = 2/466 (0%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L +A +F + ++ + + +++ A + ML+ + P+ +T ++ A
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
S+M + +G + H + + + + + N+L+ MY CG + AA +F +M RDV SW
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
TSMV GY KCG +ENAR D+ PH+N+ +WS M+ GY++NN ++++ LF M GVV
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAE 324
E +VSV+S+C L L G ++ +V++ M ++ L A++DM+ +CG IE A
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYE-YVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 325 VFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
VF + E + +SW+S+I G A +G A +A++ F QM +GF P D+TF +L+ACSHGGL
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALL 444
+ +G E + M++++GI+P+ EHY C++D+LGR G L EA I M ++P GALL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 445 NACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKK 504
AC+++ N E+A L+ + PE SG YVLL+NI A +W ++ +R +M++K VKK
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 505 IPGHSLVEVDGEFKEFLVA-DESHPQSEEIYKVLDEIFLSSELEDY 549
PG SL+E+DG+ +F + D+ HP+ +I + +EI L Y
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGY 531
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 63/357 (17%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
++N +IR + P+ AF ++ +ML+ R+ D +F F +KA E+ GE H +
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQI 143
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTT--------------- 105
+ GF +++ V N L+H YA+ G++ A +F + +DVV+WT+
Sbjct: 144 VRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAR 203
Query: 106 -MFD---------------GYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
MFD GYA NC E A++LF M R V NE +++V+S+C+ +G
Sbjct: 204 EMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLG 263
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
+E G R +E + K +M +L L AL+DM+ +CG + A +F+ + D SW+S++
Sbjct: 264 ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIK 323
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
G A G A + F +M+ G +P +
Sbjct: 324 GLAVHGHAHKAMHY-------------------------------FSQMISLGFIPRDVT 352
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF 326
+VLSAC + G I+++ + G+ P + I+DM + G + A AE F
Sbjct: 353 FTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL-AEAENF 408
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 348 bits (892), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 177/459 (38%), Positives = 269/459 (58%), Gaps = 35/459 (7%)
Query: 85 LKHAREVFDE-SSLKDVVTWTTMFDGYASRNCSELAMELFNLM-LRGDVEPNEVTLIAVL 142
+ +A +VF + +V W T+ GYA S A L+ M + G VEP+ T ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVF 202
A + M D+ +G +H + + + + N+LL +Y CG + +A ++FD+M +D+
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 203 SWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
+W S++NG+A +N KP+E+L L+ EM G
Sbjct: 189 AWNSVINGFA-------------------------------ENGKPEEALALYTEMNSKG 217
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
+ P+ +VS+LSAC ++ L LG +H ++I+ G+ ++ +N +LD+YA+CG +E A
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHV-YMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 323 AEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCM-GFKPDDITFVNLLTACSH 381
+F+ + ++N VSW S+I G A NG K+A+ +F M G P +ITFV +L ACSH
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWG 441
G++ EG EYF M Y I+P+ EH+ CM+DLL R G +K+AYE I SMPMQP W
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 396
Query: 442 ALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKG 501
LL AC +HG+ +LA + +L L+P SG YVLL+N+ A+E++W DV+++R M G
Sbjct: 397 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 502 VKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
VKK+PGHSLVEV EFL+ D+SHPQS+ IY L E+
Sbjct: 457 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 189/371 (50%), Gaps = 36/371 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRM-LRHRVEMDCRSFVFALKACEELSGDFEGESVHCV 59
+WNT+IRGY + N AFS + M + VE D ++ F +KA ++ GE++H V
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 146
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V + GF S + V+N L+H YA+ G + A +VFD+ KD+V W ++ +G+A E A
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ L+ M ++P+ T++++LSAC+++G + +G+RVH M K + +L+ N LLD+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y +CG + A+ LFD M ++ SWTS++ G A
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA--------------------------- 299
Query: 240 AGYSQNNKPKESLKLFHEMMGA-GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
N KE+++LF M G++P E V +L AC + G + E
Sbjct: 300 ----VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQAKQAVNVF 357
+ P + ++D+ A+ G ++ A E ++ + N+V W +++ +G + A F
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EF 413
Query: 358 DQMRCMGFKPD 368
+++ + +P+
Sbjct: 414 ARIQILQLEPN 424
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 9/280 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++I G+ + P A + + M ++ D + V L AC ++ G+ VH +
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K+G L N L+ YA G ++ A+ +FDE K+ V+WT++ G A + A+E
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 122 LFNLMLRGD-VEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLDM 179
LF M + + P E+T + +L ACS G ++ G M E+ + + ++D+
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369
Query: 180 YVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGD---LENARRFLDQTPHKNVVSW 235
+ G + A E M + +V W +++ GD E AR + Q + +
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 429
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGV--VPEEHALVSV 273
+ Y+ + + K+ +M+ GV VP H+LV V
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP-GHSLVEV 468
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 298/551 (54%), Gaps = 32/551 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNT++ GY + +A M ++ + V L A L G+ +H
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ GFDS + + L+ YA G L+ AR++FD ++VV+W +M D Y + AM
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F ML V+P +V+++ L AC+ +GD+E GR +H+ + L L
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK------LSVELGL--------- 368
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
R+V S+++ Y KC +++ A + + +VSW+AM+ G
Sbjct: 369 ----------------DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
++QN +P ++L F +M V P+ VSV++A +LS + WIH V+ +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG-VVMRSCLDK 471
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+V + A++DMYAKCG+I A +F+ +SER++ +WN+MI GY +G K A+ +F++M+
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
KP+ +TF+++++ACSH GL+ G + FY M+ NY I+ +HY M+DLLGR G L
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
EA++ I MP++P +GA+L AC++H NV A +A L L+P+D G +VLLANI
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIF 541
W V +VR M +G++K PG S+VE+ E F +HP S++IY L+++
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLI 711
Query: 542 LSSELEDYDTD 552
+ Y D
Sbjct: 712 CHIKEAGYVPD 722
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 235/451 (52%), Gaps = 34/451 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+++TM++G+ K + + A +F+RM VE +F + LK C + + G+ +H ++
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K GF +L GL + YA + AR+VFD +D+V+W T+ GY+ + +A+
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
E+ M +++P+ +T+++VL A S + I +G+ +H + +N+ AL+DMY
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCGSL AR+LFD M R+V SW SM++ Y
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYV---------------------------- 313
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
QN PKE++ +F +M+ GV P + +++ L AC L L G +IH+ +E G+
Sbjct: 314 ---QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK-LSVELGLD 369
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+V++ N+++ MY KC ++ AA +F + R LVSWN+MI G+A NG+ A+N F QM
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
R KPD T+V+++TA + I+ ++ + + + + ++D+ + G
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELS-ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHG 451
+ A LI M + W A+++ HG
Sbjct: 489 IMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 173/373 (46%), Gaps = 45/373 (12%)
Query: 27 RHRVEMDCRSFVFA----------LKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLI 76
RHR + R+++ A L+ C L E + +V K G E + L+
Sbjct: 20 RHRHFLSERNYIPANVYEHPAALLLERCSSLK---ELRQILPLVFKNGLYQEHFFQTKLV 76
Query: 77 HFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEV 136
+ G + A VF+ K V + TM G+A + + A++ F M DVEP
Sbjct: 77 SLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVY 136
Query: 137 TLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM 196
+L C ++ +G+ +H + K L L +MY KC + AR++FDRM
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM 196
Query: 197 ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFH 256
RD+ SW ++V AGYSQN + +L++
Sbjct: 197 PERDLVSWNTIV-------------------------------AGYSQNGMARMALEMVK 225
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
M + P +VSVL A L +++G IH + + G V ++ A++DMYAKC
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG-YAMRSGFDSLVNISTALVDMYAKC 284
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
GS+E A ++F+ + ERN+VSWNSMI Y N K+A+ +F +M G KP D++ + L
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 377 TACSHGGLISEGQ 389
AC+ G + G+
Sbjct: 345 HACADLGDLERGR 357
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 302/546 (55%), Gaps = 37/546 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++I ++ + A F M + + SF A+KAC L F G+ H
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G+ S++ V + LI Y+ G L+ AR+VFDE +++V+WT+M GY + A+
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163
Query: 122 LFNLMLRGDVEPNE------VTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
LF +L + + ++ + L++V+SACS++ + +H + K+ +++ N
Sbjct: 164 LFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNT 223
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
LLD Y K G G + AR+ DQ K+ VS+
Sbjct: 224 LLDAYAKGGE-----------------------------GGVAVARKIFDQIVDKDRVSY 254
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVP-EEHALVSVLSACGQLSCLNLGHWIHQHFV 294
+++++ Y+Q+ E+ ++F ++ VV L +VL A L +G IH V
Sbjct: 255 NSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQ-V 313
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
I G+ V + +I+DMY KCG +E A + F+ + +N+ SW +MIAGY +G A +A+
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
+F M G +P+ ITFV++L ACSH GL EG +F M+ +G++P EHY CM+DL
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 415 LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIY 474
LGR G L++AY+LI M M+P W +LL ACR+H NVELA +S L LD + G Y
Sbjct: 434 LGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYY 493
Query: 475 VLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIY 534
+LL++I A+ +W DV+RVR +M+++G+ K PG SL+E++GE FL+ DE HPQ E+IY
Sbjct: 494 MLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIY 553
Query: 535 KVLDEI 540
+ L E+
Sbjct: 554 EFLAEL 559
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 186/395 (47%), Gaps = 49/395 (12%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
DV +W ++ A S A+ F+ M + + P + + ACS + DI G++ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGD-L 217
+ + + + +AL+ MY CG L AR++FD + R++ SWTSM+ GY G+ L
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 218 ENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC 277
+ F D +N + +F + MG LVSV+SAC
Sbjct: 160 DAVSLFKDLLVDEN-----------------DDDDAMFLDSMG---------LVSVISAC 193
Query: 278 GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC--GSIEAAAEVFNAISERNLV 335
++ L IH FVI++G V++ N +LD YAK G + A ++F+ I +++ V
Sbjct: 194 SRVPAKGLTESIHS-FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 252
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQM---RCMGFKPDDITFVNLLTACSHGGLISEGQEYF 392
S+NS+++ YA +G + +A VF ++ + + F IT +L A SH G + G+
Sbjct: 253 SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNA--ITLSTVLLAVSHSGALRIGKCIH 310
Query: 393 YTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
+ R G++ + +ID+ + G ++ A + M + +W A++ MHG+
Sbjct: 311 DQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR-SWTAMIAGYGMHGH 368
Query: 453 VELARLSACNLLSLDPE--DSGI---YVLLANICA 482
A L L P DSG+ Y+ ++ A
Sbjct: 369 -------AAKALELFPAMIDSGVRPNYITFVSVLA 396
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 345 bits (885), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 191/525 (36%), Positives = 307/525 (58%), Gaps = 11/525 (2%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN +I+ + ++P A ML + V +D S LKAC L G +H +
Sbjct: 88 LWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+K G S+L ++N LI Y G L +R++FD +D V++ +M DGY A
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 121 ELFNLMLRGDVE-PNEVTLIAVLSACSQMGD-IEMGRRVHENMEKKNMRCSLNLHNALLD 178
ELF+LM +E N ++ +++S +Q D +++ ++ +M +K++ N+++D
Sbjct: 208 ELFDLM---PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS----WNSMID 260
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
YVK G + A+ LFD M RDV +W +M++GYAK G + +A+ DQ PH++VV++++M
Sbjct: 261 GYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSM 320
Query: 239 LAGYSQNNKPKESLKLFHEM-MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
+AGY QN E+L++F +M + ++P++ LV VL A QL L+ +H +++EK
Sbjct: 321 MAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL-YIVEK 379
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
+ L A++DMY+KCGSI+ A VF I +++ WN+MI G A +G + A ++
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
Q+ + KPDDITFV +L ACSH GL+ EG F M R + I+P+ +HY CM+D+L R
Sbjct: 440 LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 499
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLL 477
+G ++ A LI MP++P + W L AC H E L A +L+ + YVLL
Sbjct: 500 SGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLL 559
Query: 478 ANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLV 522
+N+ A+ W DV+RVR++M+++ ++KIPG S +E+DG EF V
Sbjct: 560 SNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 237/484 (48%), Gaps = 46/484 (9%)
Query: 25 MLRHRVEMDCR--SFVFALKACEELSGDFEGESVHCVVRKLGF--DSELLVRNGLIHFYA 80
ML + M+C S + L +C+ S D +H + K G +S L R L +
Sbjct: 1 MLVFKSTMECSISSTIHVLGSCKT-SDDVN--QIHGRLIKTGIIKNSNLTTRIVLAFASS 57
Query: 81 DRGWL-KHAREVFDE--------SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDV 131
R +L AR VF E ++D W + ++ A+ L LML V
Sbjct: 58 RRPYLADFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGV 117
Query: 132 EPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARE 191
++ +L VL ACS++G ++ G ++H ++K + L L N L+ +Y+KCG L +R+
Sbjct: 118 SVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQ 177
Query: 192 LFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP--HKNVVSWSAMLAGYSQNNKPK 249
+FDRM RD S+ SM++GY KCG + +AR D P KN++SW++M++GY+Q +
Sbjct: 178 MFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGV 237
Query: 250 E-SLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM-----HPSV 303
+ + KLF +M PE+ L+S S G+ H KG+ V
Sbjct: 238 DIASKLFADM------PEKD-LISWNSMID-------GYVKHGRIEDAKGLFDVMPRRDV 283
Query: 304 TLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM-RC 362
++D YAK G + A +F+ + R++V++NSM+AGY N +A+ +F M +
Sbjct: 284 VTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKE 343
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
PDD T V +L A + G +S+ + + Y +E+ + + K +ID+ + G +
Sbjct: 344 SHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG--VALIDMYSKCGSI 401
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELA--RLSACNLLSLDPEDSGIYVLLAN 479
+ A + + + + W A++ +HG E A L LSL P+D +V + N
Sbjct: 402 QHAMLVFEGIENKSID-HWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDI-TFVGVLN 459
Query: 480 ICAN 483
C++
Sbjct: 460 ACSH 463
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 345 bits (884), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/554 (35%), Positives = 308/554 (55%), Gaps = 40/554 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDF-EGESVHCVV 60
WN MI GY ++ N A + LR MD + V L AC E +GDF G ++H
Sbjct: 219 WNAMISGYCQSGNAKEALT-LSNGLR---AMDSVTVVSLLSACTE-AGDFNRGVTIHSYS 273
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G +SEL V N LI YA+ G L+ ++VFD ++D+++W ++ Y A+
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE-NMEKKNMRCSLNLHNALLDM 179
LF M ++P+ +TLI++ S SQ+GDI R V + K + + NA++ M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y K G + +AR VF+W P+ +V+SW+ ++
Sbjct: 394 YAKLGLVDSARA---------VFNWL----------------------PNTDVISWNTII 422
Query: 240 AGYSQNNKPKESLKLFHEMMGAG-VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+GY+QN E++++++ M G + + VSVL AC Q L G +H +++ G
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR-LLKNG 481
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
++ V + ++ DMY KCG +E A +F I N V WN++IA + +G ++AV +F
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M G KPD ITFV LL+ACSH GL+ EGQ F M+ +YGI P +HY CM+D+ GR
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G L+ A + I SM +QP + WGALL+ACR+HGNV+L ++++ +L ++PE G +VLL+
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
N+ A+ KW V +RS+ KG++K PG S +EVD + + F +++HP EE+Y+ L
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 539 EIFLSSELEDYDTD 552
+ ++ Y D
Sbjct: 722 ALQAKLKMIGYVPD 735
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 226/458 (49%), Gaps = 44/458 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYF-LRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN MI GY +A N + F L ML + D R+F LKAC + +G +HC+
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLA 176
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K GF ++ V LIH Y+ + +AR +FDE ++D+ +W M GY ++ A+
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
L N G + VT++++LSAC++ GD G +H K + L + N L+D+Y
Sbjct: 237 TLSN----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+ G L +++FDRM RD+ SW S++
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIK------------------------------- 321
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
Y N +P ++ LF EM + + P+ L+S+ S QL + + Q F + KG
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV-QGFTLRKGWF 380
Query: 301 -PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+T+ NA++ MYAK G +++A VFN + +++SWN++I+GYA NG A +A+ +++
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 360 MRCMG-FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M G + T+V++L ACS G + +G + + +N G+ + + D+ G+
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKC 499
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
G L++A L +P + W L+ HG+ E A
Sbjct: 500 GRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKA 536
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 148/312 (47%), Gaps = 40/312 (12%)
Query: 75 LIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNL-MLRGDVEP 133
L++ Y G + AR FD +DV W M GY S + F+L ML + P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 134 NEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELF 193
+ T +VL AC + D G ++H K + + +L+ +Y + ++ AR LF
Sbjct: 152 DYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 194 DRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLK 253
D M RD+ SW +M++GY + G+ KE+L
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGN-------------------------------AKEALT 237
Query: 254 LFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMY 313
L + + V +VS+LSAC + N G IH + I+ G+ + ++N ++D+Y
Sbjct: 238 LSNGLRAMDSV----TVVSLLSACTEAGDFNRGVTIHS-YSIKHGLESELFVSNKLIDLY 292
Query: 314 AKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFV 373
A+ G + +VF+ + R+L+SWNS+I Y N Q +A+++F +MR +PD +T +
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 374 NLLTACSHGGLI 385
+L + S G I
Sbjct: 353 SLASILSQLGDI 364
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 164/325 (50%), Gaps = 21/325 (6%)
Query: 179 MYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
++ C +L +A+ L R+ + ++V +VN Y G++ AR D +++V +
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 235 WSAMLAGYSQNNKPKESLKLFHE-MMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
W+ M++GY + E ++ F M+ +G+ P+ SVL AC + N H + F
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKF 179
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
G V +A +++ +Y++ ++ A +F+ + R++ SWN+MI+GY +G AK+A
Sbjct: 180 ----GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMID 413
+ + + +R M D +T V+LL+AC+ G + G ++ +G++ + + +ID
Sbjct: 236 LTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLID 290
Query: 414 LLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNV--ELARLSACNLLSLDPEDS 471
L G L++ ++ M ++ +W +++ A ++ ++ L + P D
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDL-ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DC 348
Query: 472 GIYVLLANICANERKWGDVKRVRSL 496
+ LA+I + + GD++ RS+
Sbjct: 349 LTLISLASILS---QLGDIRACRSV 370
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 345 bits (884), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 198/578 (34%), Positives = 310/578 (53%), Gaps = 41/578 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESV--HC 58
M+N MI G+ + A + F +M + D +F L A L D E + V H
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL-AGLALVADDEKQCVQFHA 173
Query: 59 VVRKLGFDSELLVRNGLIHFYA----DRGWLKHAREVFDESSLKDVVTWTTM-------- 106
K G V N L+ Y+ L AR+VFDE KD +WTTM
Sbjct: 174 AALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNG 233
Query: 107 -FD-----------------------GYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
FD GY +R + A+E+ M+ +E +E T +V+
Sbjct: 234 YFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVI 293
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVF 202
AC+ G +++G++VH + ++ S + N+L+ +Y KCG AR +F++M +D+
Sbjct: 294 RACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV 352
Query: 203 SWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
SW ++++GY G + A+ + KN++SW M++G ++N +E LKLF M G
Sbjct: 353 SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
P ++A + +C L G H +++ G S++ NA++ MYAKCG +E A
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ-LLKIGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 323 AEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
+VF + + VSWN++IA +G +AV+V+++M G +PD IT + +LTACSH
Sbjct: 472 RQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHA 531
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGA 442
GL+ +G++YF +ME Y I P +HY+ +IDLL R+G +A +I S+P +P W A
Sbjct: 532 GLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEA 591
Query: 443 LLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGV 502
LL+ CR+HGN+EL ++A L L PE G Y+LL+N+ A +W +V RVR LMRD+GV
Sbjct: 592 LLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGV 651
Query: 503 KKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
KK S +E++ + FLV D SHP++E +Y L ++
Sbjct: 652 KKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 208/468 (44%), Gaps = 74/468 (15%)
Query: 55 SVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRN 114
+VH + GF + N LI Y L +AR++FDE S D + TTM GY +
Sbjct: 35 AVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASG 94
Query: 115 CSELAMELF-------------NLMLRG--------------------DVEPNEVTLIAV 141
LA +F N M+ G +P+ T +V
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 142 LSACSQMGDIEMG-RRVHENMEKKNMRCSLNLHNALLDMYVKCGS----LVAARELFDRM 196
L+ + + D E + H K ++ NAL+ +Y KC S L +AR++FD +
Sbjct: 155 LAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 197 ETRDVFSWTSMVNGYAKCGDLENARRFLD-QTPHKNVVSWSAMLAGYSQNNKPKESLKLF 255
+D SWT+M+ GY K G + L+ + +V+++AM++GY +E+L++
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 256 HEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAK 315
M+ +G+ +E SV+ AC L LG +H + + + S N+++ +Y K
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHFDNSLVSLYYK 332
Query: 316 CGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR-------------- 361
CG + A +F + ++LVSWN++++GY ++G +A +F +M+
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392
Query: 362 --------------CM---GFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK 404
CM GF+P D F + +C+ G GQ+Y + + G
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSS 451
Query: 405 REHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
+ +I + + G+++EA ++ +MP +W AL+ A HG+
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLD-SVSWNALIAALGQHGH 498
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 168/357 (47%), Gaps = 63/357 (17%)
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNG 210
+++ R VH N+ + ++ N L+D+Y K L AR+LFD + D + T+MV+G
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 211 YAKCGDLENARRFLDQTP--HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEH 268
Y GD+ AR ++ P ++ V ++AM+ G+S NN ++ LF +M G P+
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 269 ALVSVLSACGQLS-----CLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGS----I 319
SVL+ ++ C+ ++ G +++NA++ +Y+KC S +
Sbjct: 150 TFASVLAGLALVADDEKQCVQF-----HAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 320 EAAAEVFNAISERN--------------------------------LVSWNSMIAGYAAN 347
+A +VF+ I E++ LV++N+MI+GY
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKRE 406
G ++A+ + +M G + D+ T+ +++ AC+ GL+ G++ + Y + +RE
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL--------RRE 316
Query: 407 HYS-----CMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARL 458
+S ++ L + G EA + MP + +W ALL+ G++ A+L
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDL-VSWNALLSGYVSSGHIGEAKL 372
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/491 (36%), Positives = 291/491 (59%), Gaps = 6/491 (1%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYA---SR 113
HC + G + + L I ++ G L++A VF + TM +
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEP 94
Query: 114 NCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLH 173
N +A+ ++ + +P+ T VL ++ D+ GR++H + S+++
Sbjct: 95 NAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV 154
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP--HKN 231
L+ MY CG L AR++FD M +DV W +++ GY K G+++ AR L+ P +N
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
VSW+ +++GY+++ + E++++F M+ V P+E L++VLSAC L L LG I
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
+V +GM+ +V+L NA++DMYAK G+I A +VF ++ERN+V+W ++IAG A +G
Sbjct: 275 -YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
+A+ +F++M G +P+D+TF+ +L+ACSH G + G+ F +M YGI P EHY CM
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 412 IDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDS 471
IDLLGR G L+EA E+I SMP + A WG+LL A +H ++EL + L+ L+P +S
Sbjct: 394 IDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNS 453
Query: 472 GIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSE 531
G Y+LLAN+ +N +W + + +R++M+ GVKK+ G S +EV+ +F+ D +HPQ E
Sbjct: 454 GNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVE 513
Query: 532 EIYKVLDEIFL 542
I+++L E+ L
Sbjct: 514 RIHEILQEMDL 524
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 68/378 (17%)
Query: 3 NTMIRGYRKARNPN---IAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV 59
NTMIR PN IA + + ++ + D +F F LK +S + G +H
Sbjct: 82 NTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQ 141
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDV------------------- 100
V GFDS + V GLI Y G L AR++FDE +KDV
Sbjct: 142 VVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEA 201
Query: 101 --------------VTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACS 146
V+WT + GYA + A+E+F ML +VEP+EVTL+AVLSAC+
Sbjct: 202 RSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACA 261
Query: 147 QMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTS 206
+G +E+G R+ ++ + M +++L+NA++DMY K G++ A ++F+ + R+V +WT+
Sbjct: 262 DLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTT 321
Query: 207 MVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPE 266
++ G A G E+L +F+ M+ AGV P
Sbjct: 322 IIAGLATHG-------------------------------HGAEALAMFNRMVKAGVRPN 350
Query: 267 EHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF 326
+ +++LSAC + ++LG + + G+HP++ ++D+ + G + A EV
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 327 NAIS-ERNLVSWNSMIAG 343
++ + N W S++A
Sbjct: 411 KSMPFKANAAIWGSLLAA 428
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W +I GY K+ + A F RML VE D + + L AC +L GE + V
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G + + + N +I YA G + A +VF+ + ++VVTWTT+ G A+ A+
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALA 337
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMY 180
+FN M++ V PN+VT IA+LSACS +G +++G+R+ +M K + ++ + ++D+
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENARRFLDQTPH---KNVVSWS 236
+ G L A E+ M + + W S++ DLE R L + N ++
Sbjct: 398 GRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYM 457
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGV 263
+ YS + ES + + M G GV
Sbjct: 458 LLANLYSNLGRWDESRMMRNMMKGIGV 484
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 286/586 (48%), Gaps = 84/586 (14%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCR----SFVFALKACEELSGDFEGESVH 57
WN++I Y K P +A F RM E CR + V L C L G+ +H
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTN---EFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 58 CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
C + V N L+ YA G + A VF S+KDVV+W M GY+ E
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 118 LAMELF-----------------------------------NLMLRGDVEPNEVTLIAVL 142
A+ LF ML ++PNEVTLI+VL
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLH-------NALLDMYVKCGSLVAARELFDR 195
S C+ +G + G+ +H K + N H N L+DMY
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY--------------- 417
Query: 196 METRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK--NVVSWSAMLAGYSQNNKPKESLK 253
AKC ++ AR D K +VV+W+ M+ GYSQ+ ++L+
Sbjct: 418 ----------------AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 254 LFHEMM--GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILD 311
L EM P + L AC L+ L +G IH + + + + ++N ++D
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 312 MYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDIT 371
MYAKCGSI A VF+ + +N V+W S++ GY +G ++A+ +FD+MR +GFK D +T
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 372 FVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
+ +L ACSH G+I +G EYF M+ +G+ P EHY+C++DLLGR G L A LI M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 432 PMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVK 491
PM+P W A L+ CR+HG VEL +A + L G Y LL+N+ AN +W DV
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVT 701
Query: 492 RVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
R+RSLMR KGVKK PG S VE F V D++HP ++EIY+VL
Sbjct: 702 RIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 242/471 (51%), Gaps = 18/471 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++IR Y N F M D +F F KAC E+S GES H +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
GF S + V N L+ Y+ L AR+VFDE S+ DVV+W ++ + YA ++A+E
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 122 LFNLMLRG-DVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+F+ M P+ +TL+ VL C+ +G +G+++H M ++ + N L+DMY
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVSWS 236
KCG + A +F M +DV SW +MV GY++ G E+A R ++ + +VV+WS
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV-- 294
A ++GY+Q E+L + +M+ +G+ P E L+SVLS C + L G IH + +
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 295 ---IEKGMHPSVTLA-NAILDMYAKCGSIEAAAEVFNAIS--ERNLVSWNSMIAGYAANG 348
+ K H + N ++DMYAKC ++ A +F+++S ER++V+W MI GY+ +G
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 349 QAKQAVNVFDQM---RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
A +A+ + +M C +P+ T L AC+ + G++ RN
Sbjct: 455 DANKALELLSEMFEEDCQT-RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 513
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
+C+ID+ + G + +A + +M M E W +L+ MHG E A
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEA 563
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 174/464 (37%), Positives = 275/464 (59%), Gaps = 9/464 (1%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNC--SELAMELFNLMLRGDV-EPNEVTLIAV 141
L +AR +FD S + + + Y+S + A F LM+ V PN V
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 142 LSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGS-LVAARELFDRMETRD 200
L + + VH ++ K + + ALL Y S + AR+LFD M R+
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 201 VFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
V SWT+M++GYA+ GD+ NA + P ++V SW+A+LA +QN E++ LF M+
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN 252
Query: 261 -AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI 319
+ P E +V VLSAC Q L L IH F + + V ++N+++D+Y KCG++
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA-FAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 320 EAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGF---KPDDITFVNLL 376
E A+ VF S+++L +WNSMI +A +G++++A+ VF++M + KPD ITF+ LL
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
AC+HGGL+S+G+ YF M +GI+P+ EHY C+IDLLGR G EA E++++M M+
Sbjct: 372 NACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKAD 431
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
EA WG+LLNAC++HG+++LA ++ NL++L+P + G ++AN+ W + +R R +
Sbjct: 432 EAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 497 MRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
++ + K PG S +E+D E +F D+SHP++EEIY +LD +
Sbjct: 492 IKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 160/371 (43%), Gaps = 71/371 (19%)
Query: 18 AFSYFLRMLRHRVEMDCRSFVF--ALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGL 75
AFS+F R++ +R F++ LK+ LS F VH + K GF ++V+ L
Sbjct: 109 AFSFF-RLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTAL 167
Query: 76 IHFYADR-GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDV--- 131
+H YA + AR++FDE S ++VV+WT M GYA A+ LF M DV
Sbjct: 168 LHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSW 227
Query: 132 -----------------------------EPNEVTLIAVLSACSQMGDIEMGRRVHENME 162
PNEVT++ VLSAC+Q G +++ + +H
Sbjct: 228 NAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAY 287
Query: 163 KKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARR 222
++++ + + N+L+D+Y KCG+L A +F + + +W SM+N +A G
Sbjct: 288 RRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG------- 340
Query: 223 FLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG---VVPEEHALVSVLSACGQ 279
+ +E++ +F EMM + P+ + +L+AC
Sbjct: 341 ------------------------RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 280 LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWN 338
++ G G+ P + ++D+ + G + A EV + + + + W
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWG 436
Query: 339 SMIAGYAANGQ 349
S++ +G
Sbjct: 437 SLLNACKIHGH 447
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 11/231 (4%)
Query: 18 AFSYFLRMLRH-RVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLI 76
A S F RM+ + + + V L AC + + +H + S++ V N L+
Sbjct: 243 AVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLV 302
Query: 77 HFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR---GDVEP 133
Y G L+ A VF +S K + W +M + +A SE A+ +F M++ D++P
Sbjct: 303 DLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKP 362
Query: 134 NEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMYVKCGSLVAAREL 192
+ +T I +L+AC+ G + GR + M + + + + L+D+ + G A E+
Sbjct: 363 DHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEV 422
Query: 193 FDRMETR-DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
M+ + D W S++N G L+ L + KN+V+ + GY
Sbjct: 423 MSTMKMKADEAIWGSLLNACKIHGHLD-----LAEVAVKNLVALNPNNGGY 468
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 341 bits (875), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 293/507 (57%), Gaps = 4/507 (0%)
Query: 37 FVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESS 96
++ L+ C +++H + KLG + N L++ Y G HA +VFDE
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 97 LKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD-VEPNEVTLIAVLSACSQMGDIEMGR 155
+D + W ++ N S + +F+ + + P++ A++ AC+ +G I+ GR
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 156 RVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCG 215
+VH + + ++L+DMY KCG L +A+ +FD + ++ SWT+MV+GYAK G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 216 DLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV-VPEEHALVSVL 274
E A P KN+ SW+A+++G+ Q+ K E+ +F EM V + + L S++
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIV 245
Query: 275 SACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL 334
AC L+ G +H VI G V ++NA++DMYAKC + AA ++F+ + R++
Sbjct: 246 GACANLAASIAGRQVHG-LVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 335 VSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYT 394
VSW S+I G A +GQA++A+ ++D M G KP+++TFV L+ ACSH G + +G+E F +
Sbjct: 305 VSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 395 MERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE 454
M ++YGI+P +HY+C++DLLGR+GLL EA LI +MP P E W ALL+AC+ G +
Sbjct: 365 MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQ 424
Query: 455 LARLSACNLL-SLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
+ A +L+ S +D Y+LL+NI A+ WG V R + + V+K PGHS VEV
Sbjct: 425 MGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEV 484
Query: 514 DGEFKEFLVADESHPQSEEIYKVLDEI 540
E + F + SHP E+I+++L ++
Sbjct: 485 RKETEVFYAGETSHPLKEDIFRLLKKL 511
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 3/228 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVE-MDCRSFVFALKACEELSGDFEGESVHCVV 60
W +I G+ ++ AFS F M R RV+ +D + AC L+ G VH +V
Sbjct: 205 WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLV 264
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
LGFDS + + N LI YA + A+++F +DVV+WT++ G A +E A+
Sbjct: 265 IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 324
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDM 179
L++ M+ V+PNEVT + ++ ACS +G +E GR + ++M K +R SL + LLD+
Sbjct: 325 ALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDL 384
Query: 180 YVKCGSLVAARELFDRME-TRDVFSWTSMVNGYAKCGDLENARRFLDQ 226
+ G L A L M D +W ++++ + G + R D
Sbjct: 385 LGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 300/555 (54%), Gaps = 16/555 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+N MI GY + + A F R++ + D S +AC + G EG ++ +
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K ++ V N I Y L A VFDE +D V+W + + +
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF MLR +EP+E T ++L AC+ G + G +H ++ K M + ++ +L+DMY
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KCG + A ++ R R S G +E + ++ + VSW+++++G
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y + +++ LF MM G+ P++ +VL C L+ LG IH VI+K +
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ-VIKKELQS 636
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
V + + ++DMY+KCG + + +F R+ V+WN+MI GYA +G+ ++A+ +F++M
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
KP+ +TF+++L AC+H GLI +G EYFY M+R+YG+ P+ HYS M+D+LG++G +
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMH-GNVELARLSACNLLSLDPEDSGIYVLLANI 480
K A ELI MP + + W LL C +H NVE+A + LL LDP+DS Y LL+N+
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
A+ W V +R MR +KK PG S VE+ E FLV D++HP+ EEIY+ L I
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLI 876
Query: 541 FLSSELEDYDTDIFV 555
+ SE++ +D FV
Sbjct: 877 Y--SEMKPFDDSSFV 889
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 235/514 (45%), Gaps = 54/514 (10%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN+M+ GY + + F+ M R +E D R+F LK C L G +H +V
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
++G D++++ + L+ YA + VF K+ V+W+ + G N LA++
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
F M + + ++ +VL +C+ + ++ +G ++H + K + + A LDMY
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KC ++ A+ LFD E + S+ +M+ G
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMIT-------------------------------G 356
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
YSQ ++L LFH +M +G+ +E +L V AC + L+ G I+ I+ +
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG-LAIKSSLSL 415
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
V +ANA +DMY KC ++ A VF+ + R+ VSWN++IA + NG+ + + +F M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
+PD+ TF ++L AC+ GG + G E ++ ++ G+ +ID+ + G++
Sbjct: 476 RSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMI 533
Query: 422 KEA-------------------YELITSMPMQPCEAAWGALLNACRMHGNVELARLSACN 462
+EA E + + +Q +W ++++ M E A++
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 463 LLSLD-PEDSGIYVLLANICANERKWGDVKRVRS 495
++ + D Y + + CAN G K++ +
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 129/240 (53%), Gaps = 1/240 (0%)
Query: 141 VLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRD 200
V C++ G +E+G++ H +M R + + N LL +Y V+A +FD+M RD
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 201 VFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
V SW M+NGY+K D+ A F + P ++VVSW++ML+GY QN + +S+++F +M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 261 AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
G+ + +L C L +LG IH V+ G V A+A+LDMYAK
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHG-IVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 321 AAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS 380
+ VF I E+N VSW+++IAG N A+ F +M+ + + ++L +C+
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 187/469 (39%), Gaps = 73/469 (15%)
Query: 18 AFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIH 77
+FSYF L + +F F K C + G+ H + GF V N L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 78 FYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDV------ 131
Y + A VFD+ L+DVV+W M +GY+ N A FN+M DV
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 132 -------------------------EPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNM 166
E + T +L CS + D +G ++H + +
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 167 RCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQ 226
+ +ALLDMY K V + +F + ++ SW
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW---------------------- 249
Query: 227 TPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLG 286
SA++AG QNN +LK F EM + SVL +C LS L LG
Sbjct: 250 ---------SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 287 HWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAA 346
+H H ++ + A LDMYAKC +++ A +F+ N S+N+MI GY+
Sbjct: 301 GQLHAH-ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE 406
+A+ +F ++ G D+I+ + AC+ +SEG + + IK
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-----GLAIKSSLS 414
Query: 407 HYSCM----IDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
C+ ID+ G+ L EA+ + M + +W A++ A +G
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA-VSWNAIIAAHEQNG 462
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 295/542 (54%), Gaps = 34/542 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNT+I Y + N + AF F RM + D LKAC + G ++G+ VHC+
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G D +L + LI Y+ G +K AR+VF VV+ + GY+ N E A+
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVV 615
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLN-LHNALLDMY 180
LF ML V P+E+T ++ AC + + +G + H + K+ L +LL MY
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+ + A LF + + K++V W+ M++
Sbjct: 676 MNSRGMTEACALFSELSSP------------------------------KSIVLWTGMMS 705
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
G+SQN +E+LK + EM GV+P++ V+VL C LS L G IH +
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS-LIFHLAHD 764
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+N ++DMYAKCG ++ +++VF+ + R N+VSWNS+I GYA NG A+ A+ +FD
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDS 824
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
MR PD+ITF+ +LTACSH G +S+G++ F M YGI+ + +H +CM+DLLGR G
Sbjct: 825 MRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWG 884
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
L+EA + I + ++P W +LL ACR+HG+ +SA L+ L+P++S YVLL+N
Sbjct: 885 YLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSN 944
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
I A++ W +R +MRD+GVKK+PG+S ++V+ F D+SH + +I L++
Sbjct: 945 IYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLED 1004
Query: 540 IF 541
++
Sbjct: 1005 LY 1006
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 204/414 (49%), Gaps = 38/414 (9%)
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
G++VH LG DSE + N ++ YA + +A + FD KDV W +M Y+S
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL 172
+ F + + PN+ T VLS C++ ++E GR++H +M K + +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 173 HNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC------------------ 214
AL+DMY KC + AR +F+ + + WT + +GY K
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 215 -----------------GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHE 257
G L++AR + +VV+W+ M++G+ + +++ F
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 258 MMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
M + V L SVLSA G ++ L+LG +H I+ G+ ++ + ++++ MY+KC
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE-AIKLGLASNIYVGSSLVSMYSKCE 376
Query: 318 SIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLT 377
+EAAA+VF A+ E+N V WN+MI GYA NG++ + + +F M+ G+ DD TF +LL+
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 378 ACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
C+ + G + F+++ + + ++D+ + G L++A ++ M
Sbjct: 437 TCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 214/458 (46%), Gaps = 39/458 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI G+ K +A YF M + V+ + L A ++ G VH
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
KLG S + V + L+ Y+ ++ A +VF+ K+ V W M GYA S ME
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF M ++ T ++LS C+ D+EMG + H + KK + +L + NAL+DMY
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KCG+L AR++F+RM RD +W +++ Y
Sbjct: 475 KCGALEDARQIFERMCDRDNVTWNTIIGSYV----------------------------- 505
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Q+ E+ LF M G+V + L S L AC + L G +H ++ G+
Sbjct: 506 --QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC-LSVKCGLDR 562
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ ++++DMY+KCG I+ A +VF+++ E ++VS N++IAGY+ N ++AV +F +M
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEML 621
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG---RT 418
G P +ITF ++ AC ++ G ++ + + G + E+ I LLG +
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLG--ISLLGMYMNS 678
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
+ EA L + + W +++ +G E A
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 212/470 (45%), Gaps = 45/470 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN+M+ Y P F+ + +++ + +F L C + G +HC +
Sbjct: 128 WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K+G + L+ YA + AR VF+ + V WT +F GY E A+
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F M P+ + + V++ ++G ++ R + M ++ N ++ +
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVA----WNVMISGHG 303
Query: 182 KCGSLVAARELFDRM------ETR---------------------------------DVF 202
K G A E F M TR +++
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 203 SWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
+S+V+ Y+KC +E A + + KN V W+AM+ GY+ N + + ++LF +M +G
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
++ S+LS C L +G H +I+K + ++ + NA++DMYAKCG++E A
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQFHS-IIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 323 AEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
++F + +R+ V+WN++I Y + +A ++F +M G D + L AC+H
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP 432
+ +G++ + + G+ S +ID+ + G++K+A ++ +S+P
Sbjct: 543 HGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 143/328 (43%), Gaps = 42/328 (12%)
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNG 210
+ +G+ VH + L NA++D+Y KC + A + FD +E +DV +W SM++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 211 YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
Y+ G KP + L+ F + + P +
Sbjct: 135 YSSIG-------------------------------KPGKVLRSFVSLFENQIFPNKFTF 163
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
VLS C + + + G IH +I+ G+ + A++DMYAKC I A VF I
Sbjct: 164 SIVLSTCARETNVEFGRQIHCS-MIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
+ N V W + +GY G ++AV VF++MR G +PD + FV ++ G + + +
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARL 282
Query: 391 YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM---PMQPCEAAWGALLNAC 447
F M P ++ MI G+ G A E +M ++ + G++L+A
Sbjct: 283 LFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 448 RMHGNVELARLSACNLLSLDPEDSGIYV 475
+ N++L + + L S IYV
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLA-SNIYV 364
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 3/219 (1%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+W M+ G+ + A ++ M V D +FV L+ C LS EG ++H ++
Sbjct: 699 LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI 758
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK-DVVTWTTMFDGYASRNCSELA 119
L D + L N LI YA G +K + +VFDE + +VV+W ++ +GYA +E A
Sbjct: 759 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLD 178
+++F+ M + + P+E+T + VL+ACS G + GR++ E M + + ++ ++D
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 878
Query: 179 MYVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGD 216
+ + G L A + + + D W+S++ GD
Sbjct: 879 LLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD 917
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 184/471 (39%), Positives = 268/471 (56%), Gaps = 4/471 (0%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L +AR++FD + + Y + ++ L+NL+ + P+ T + +A
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
+ R +H + L+ Y K G+L AR +FD M RDV W
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 151
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM-MGAGV 263
+M+ GY + GD++ A D P KNV SW+ +++G+SQN E+LK+F M V
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
P +VSVL AC L L +G + + + E G ++ + NA ++MY+KCG I+ A
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRL-EGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 324 EVFNAI-SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
+F + ++RNL SWNSMI A +G+ +A+ +F QM G KPD +TFV LL AC HG
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGA 442
G++ +GQE F +ME + I PK EHY CMIDLLGR G L+EAY+LI +MPM+P WG
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 443 LLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGV 502
LL AC HGNVE+A +++ L L+P + G V+++NI A KW V R+R LM+ + +
Sbjct: 391 LLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETM 450
Query: 503 KKIPGHS-LVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
K G+S VEV + +F V D+SHP+S EIY+VL+EIF +LE D
Sbjct: 451 TKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLEKSRFD 501
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 141/332 (42%), Gaps = 65/332 (19%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
+H + GF+S+ LI YA G L AR VFDE S +DV W M GY R
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 116 SELAMELFNLMLRGD--------------------------------VEPNEVTLIAVLS 143
+ AMELF+ M R + V+PN +T+++VL
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM-ETRDVF 202
AC+ +G++E+GRR+ + ++ + NA ++MY KCG + A+ LF+ + R++
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLC 283
Query: 203 SWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
SW SM+ A G K E+L LF +M+ G
Sbjct: 284 SWNSMIGSLATHG-------------------------------KHDEALTLFAQMLREG 312
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
P+ V +L AC + G + + + P + ++D+ + G ++ A
Sbjct: 313 EKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEA 372
Query: 323 AEVFNAISER-NLVSWNSMIAGYAANGQAKQA 353
++ + + + V W +++ + +G + A
Sbjct: 373 YDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 197 ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFH 256
ET+D+ ++ +L AR+ D + ++ ++ Y +++P ES+ L++
Sbjct: 18 ETKDLLQRLLLI------PNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYN 71
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
+ G+ P H + +A S +H F G ++ YAK
Sbjct: 72 LLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQF-FRSGFESDSFCCTTLITAYAKL 130
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G++ A VF+ +S+R++ WN+MI GY G K A+ +FD M + + ++ ++
Sbjct: 131 GALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP----RKNVTSWTTVI 186
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKP 403
+ S G SE + F ME++ +KP
Sbjct: 187 SGFSQNGNYSEALKMFLCMEKDKSVKP 213
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 184/512 (35%), Positives = 289/512 (56%), Gaps = 33/512 (6%)
Query: 30 VEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAR 89
+ D R + LK C +G VH + + F ++++ N L++ YA G L+ AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 90 EVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
+VF++ +D VTWTT+ GY+ + A+ FN MLR PNE TL +V+ A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
G ++H K ++++ +ALLD+Y + G + A+ +FD +E+
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES----------- 224
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
+N VSW+A++AG+++ + +++L+LF M+ G P +
Sbjct: 225 --------------------RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
S+ AC L G W+H ++I+ G N +LDMYAK GSI A ++F+ +
Sbjct: 265 YASLFGACSSTGFLEQGKWVHA-YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
++R++VSWNS++ YA +G K+AV F++MR +G +P++I+F+++LTACSH GL+ EG
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRM 449
Y+ M+++ GI P+ HY ++DLLGR G L A I MP++P A W ALLNACRM
Sbjct: 384 HYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 442
Query: 450 HGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHS 509
H N EL +A ++ LDP+D G +V+L NI A+ +W D RVR M++ GVKK P S
Sbjct: 443 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
Query: 510 LVEVDGEFKEFLVADESHPQSEEIYKVLDEIF 541
VE++ F+ DE HPQ EEI + +E+
Sbjct: 503 WVEIENAIHMFVANDERHPQREEIARKWEEVL 534
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 159/357 (44%), Gaps = 44/357 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W T+I GY + P A +F +MLR + + +KA G +H
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 188
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K GFDS + V + L+ Y G + A+ VFD ++ V+W + G+A R+ +E A+E
Sbjct: 189 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALE 248
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF MLR P+ + ++ ACS G +E G+ VH M K + N LLDMY
Sbjct: 249 LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYA 308
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K GS+ AR++FDR+ RDV SW S +L
Sbjct: 309 KSGSIHDARKIFDRLAKRDVVSWNS-------------------------------LLTA 337
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y+Q+ KE++ F EM G+ P E + +SVL+AC L+ G W + + + G+ P
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG-WHYYELMKKDGIVP 396
Query: 302 SVTLANAILDMYAKCG------------SIEAAAEVFNAISERNLVSWNSMIAGYAA 346
++D+ + G IE A ++ A+ + N+ + YAA
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 271/471 (57%), Gaps = 4/471 (0%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE 132
N ++ Y G L AR VFD +DVV+W TM GYA A+ + R ++
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
NE + +L+AC + +++ R+ H + ++ L +++D Y KCG + +A+
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
FD M +D+ WT++++GYAK GD+E A + + P KN VSW+A++AGY + +L
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 253 KLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDM 312
LF +M+ GV PE+ S L A ++ L G IH ++I + P+ + ++++DM
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHG-YMIRTNVRPNAIVISSLIDM 355
Query: 313 YAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDIT 371
Y+K GS+EA+ VF ++ + V WN+MI+ A +G +A+ + D M +P+ T
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTT 415
Query: 372 FVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
V +L ACSH GL+ EG +F +M +GI P +EHY+C+IDLLGR G KE I M
Sbjct: 416 LVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM 475
Query: 432 PMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVK 491
P +P + W A+L CR+HGN EL + +A L+ LDPE S Y+LL++I A+ KW V+
Sbjct: 476 PFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVE 535
Query: 492 RVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQS--EEIYKVLDEI 540
++R +M+ + V K S +E++ + + F V+D SH + EEIY +L +
Sbjct: 536 KLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 37/380 (9%)
Query: 138 LIAVLSACSQMGDIEMGRRVHENMEKKNM-RCSLNLHNALLDMYVKCGSLVAARELFDRM 196
L ++L C ++ G+ +H +++ R + L N L+ MY+KCG + A ++FD+M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 197 ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFH 256
R+++SW +MV+GY K G L AR D P ++VVSW+ M+ GY+Q+ E+L +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
E +G+ E + +L+AC + L L H V+ G +V L+ +I+D YAKC
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQ-VLVAGFLSNVVLSCSIIDAYAKC 227
Query: 317 GSIEAAAEVFNAIS-------------------------------ERNLVSWNSMIAGYA 345
G +E+A F+ ++ E+N VSW ++IAGY
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
G +A+++F +M +G KP+ TF + L A + + G+E M R ++P
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNA 346
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMH--GNVELARLSACNL 463
S +ID+ ++G L+ + + + W +++A H G+ L L
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 464 LSLDPEDSGIYVLLANICAN 483
+ P + + V+L N C++
Sbjct: 407 FRVQPNRTTLVVIL-NACSH 425
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 37/320 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTM+ GY + N + A ++ R ++ + SF L AC + H V
Sbjct: 147 WNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVL 206
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS--------- 112
GF S +++ +I YA G ++ A+ FDE ++KD+ WTT+ GYA
Sbjct: 207 VAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEK 266
Query: 113 ----------------------RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGD 150
+ A++LF M+ V+P + T + L A + +
Sbjct: 267 LFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIAS 326
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR-DVFSWTSMVN 209
+ G+ +H M + N+R + + ++L+DMY K GSL A+ +F + + D W +M++
Sbjct: 327 LRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMIS 386
Query: 210 GYAKCGDLENARRFLDQT----PHKNVVSWSAMLAGYSQNNKPKESLKLFHEM-MGAGVV 264
A+ G A R LD N + +L S + +E L+ F M + G+V
Sbjct: 387 ALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIV 446
Query: 265 PEEHALVSVLSACGQLSCLN 284
P++ ++ G+ C
Sbjct: 447 PDQEHYACLIDLLGRAGCFK 466
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 301/548 (54%), Gaps = 43/548 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEG-----ESV 56
WN M+ G+ ++ + + AFS F M + + D + + ++ S FE E++
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQ-----SASFEKSLKLLEAM 175
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKD--VVTWTTMFDGYASRN 114
H V +LG D ++ V N I Y G L A+ VF+ D VV+W +MF Y+
Sbjct: 176 HAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
+ A L+ LMLR + +P+ T I + ++C + GR +H +
Sbjct: 236 EAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA------------- 282
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
+ G+ +D+ + + ++ Y+K D +AR D + VS
Sbjct: 283 ------IHLGT------------DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS 324
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
W+ M++GY++ E+L LFH M+ +G P+ L+S++S CG+ L G WI
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD 384
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
I +V + NA++DMY+KCGSI A ++F+ E+ +V+W +MIAGYA NG +A+
Sbjct: 385 IYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEAL 444
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
+F +M + +KP+ ITF+ +L AC+H G + +G EYF+ M++ Y I P +HYSCM+DL
Sbjct: 445 KLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDL 504
Query: 415 LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIY 474
LGR G L+EA ELI +M +P WGALLNAC++H NV++A +A +L +L+P+ + Y
Sbjct: 505 LGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPY 564
Query: 475 VLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIY 534
V +ANI A W R+RS+M+ + +KK PG S+++V+G+ F V + H ++E IY
Sbjct: 565 VEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Query: 535 KVLDEIFL 542
L+ + L
Sbjct: 625 FTLNGLSL 632
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 214/496 (43%), Gaps = 46/496 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN IR +P + F M R E + +F F KAC L+ E VH +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K F S++ V + + + +A +VF+ +D TW M G+ ++ A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF M ++ P+ VT++ ++ + S E ++ E M +R +++ + +
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVAN--- 192
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPH--KNVVSWSAML 239
+W S Y KCGDL++A+ + + VVSW++M
Sbjct: 193 ---------------------TWIST---YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
YS + ++ L+ M+ P+ +++ ++C L G IH H I G
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSH-AIHLGT 287
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ N + MY+K +A +F+ ++ R VSW MI+GYA G +A+ +F
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY---SCMIDLLG 416
M G KPD +T ++L++ C G + G+ + YG KR++ + +ID+
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGK-WIDARADIYGC--KRDNVMICNALIDMYS 404
Query: 417 RTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI-YV 475
+ G + EA ++ + P + W ++ ++G A ++ LD + + I ++
Sbjct: 405 KCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFL 463
Query: 476 LLANICAN----ERKW 487
+ CA+ E+ W
Sbjct: 464 AVLQACAHSGSLEKGW 479
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 162/370 (43%), Gaps = 36/370 (9%)
Query: 89 REVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQM 148
R ++ S L V W +RN ++ LF M RG EPN T V AC+++
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 149 GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV 208
D+ VH ++ K + + A +DM+VKC S+ A ++F+RM RD +W +M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 209 NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEH 268
+G+ + G + A + + S + Q+ ++SLKL M G
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG------ 179
Query: 269 ALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
I G+ VT+AN + Y KCG +++A VF A
Sbjct: 180 --------------------------IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 329 I--SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
I +R +VSWNSM Y+ G+A A ++ M FKPD TF+NL +C + ++
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
+G+ ++ + G E + I + ++ A L M + C +W +++
Sbjct: 274 QGR-LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC-VSWTVMISG 331
Query: 447 CRMHGNVELA 456
G+++ A
Sbjct: 332 YAEKGDMDEA 341
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 286/541 (52%), Gaps = 36/541 (6%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFEGESVHCV 59
+WNTMI GYRK + F ++ +D + + L A EL G +H +
Sbjct: 187 LWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSL 246
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K G S V G I Y+ G +K +F E D+V + M GY S +EL+
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELS 306
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ LF ++ TL++++ G + + +H K N ++ AL +
Sbjct: 307 LSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTV 363
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y +K ++E+AR+ D++P K++ SW+AM+
Sbjct: 364 Y-------------------------------SKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+GY+QN ++++ LF EM + P + +LSAC QL L+LG W+H V
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDF 451
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
S+ ++ A++ MYAKCGSI A +F+ ++++N V+WN+MI+GY +GQ ++A+N+F +
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G P +TF+ +L ACSH GL+ EG E F +M YG +P +HY+CM+D+LGR G
Sbjct: 512 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 571
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
L+ A + I +M ++P + W LL ACR+H + LAR + L LDP++ G +VLL+N
Sbjct: 572 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSN 631
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
I + +R + VR + + + K PG++L+E+ F D+SHPQ +EIY+ L++
Sbjct: 632 IHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEK 691
Query: 540 I 540
+
Sbjct: 692 L 692
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 218/454 (48%), Gaps = 39/454 (8%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFEGESVHCV 59
++N ++RG+ +P+ + S F + + ++ + ++ FA+ A D G +H
Sbjct: 85 LFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQ 144
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
G DSELL+ + ++ Y ++ AR+VFD KD + W TM GY +
Sbjct: 145 AVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 120 MELF-NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
+++F +L+ + TL+ +L A +++ ++ +G ++H K H+ +L
Sbjct: 205 IQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS----HDYVL- 259
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
T ++ Y+KCG ++ + ++V+++AM
Sbjct: 260 --------------------------TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAM 293
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+ GY+ N + + SL LF E+M +G LVS++ G L + + IH + ++
Sbjct: 294 IHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHG-YCLKSN 349
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+++ A+ +Y+K IE+A ++F+ E++L SWN+MI+GY NG + A+++F
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 409
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M+ F P+ +T +L+AC+ G +S G+ + + + R+ + + +I + +
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
G + EA L M + E W +++ +HG
Sbjct: 469 GSIAEARRLFDLM-TKKNEVTWNTMISGYGLHGQ 501
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 145/324 (44%), Gaps = 34/324 (10%)
Query: 64 GFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELF 123
GF +++ + L +D G + +AR++F DV + + G++ ++ +F
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106
Query: 124 -NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK 182
+L D++PN T +SA S D GR +H L L + ++ MY K
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFK 166
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
+ AR++FDRM +D W +M++GY K
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRK----------------------------- 197
Query: 243 SQNNKPKESLKLFHEMMGAGVVP-EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
N ES+++F +++ + L+ +L A +L L LG IH + G +
Sbjct: 198 --NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS-LATKTGCYS 254
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ + +Y+KCG I+ + +F + ++V++N+MI GY +NG+ + ++++F ++
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 362 CMGFKPDDITFVNLLTACSHGGLI 385
G + T V+L+ H LI
Sbjct: 315 LSGARLRSSTLVSLVPVSGHLMLI 338
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 132/337 (39%), Gaps = 48/337 (14%)
Query: 156 RVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCG 215
+ H + R ++L L G++ AR++F ++ DVF
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVF------------- 84
Query: 216 DLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLF-HEMMGAGVVPEEHALVSVL 274
++ ++ G+S N P SL +F H + P +
Sbjct: 85 ------------------LFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAI 126
Query: 275 SACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL 334
SA G IH V++ G + L + I+ MY K +E A +VF+ + E++
Sbjct: 127 SAASGFRDDRAGRVIHGQAVVD-GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 335 VSWNSMIAGYAANGQAKQAVNVF-DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFY 393
+ WN+MI+GY N +++ VF D + + D T +++L A + + G + +
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ-IH 244
Query: 394 TMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNV 453
++ G + I L + G +K L +P A+ A+++ +G
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF-RKPDIVAYNAMIHGYTSNGET 303
Query: 454 EL------------ARLSACNLLSLDPEDSGIYVLLA 478
EL ARL + L+SL P + ++ A
Sbjct: 304 ELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA 340
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 278/512 (54%), Gaps = 40/512 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRV-EMDCRSFVFALKACEELSGDFEGESVHCV 59
+WN +I+GY S +RM+R + D +F +K C G SVH +
Sbjct: 76 LWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGL 135
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V ++GFD +++V + FY L AR+VF E ++ V+WT + Y
Sbjct: 136 VLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV-------- 187
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ G++E + + + M ++N L NAL+D
Sbjct: 188 ---------------------------KSGELEEAKSMFDLMPERN----LGSWNALVDG 216
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
VK G LV A++LFD M RD+ S+TSM++GYAK GD+ +AR ++ +V +WSA++
Sbjct: 217 LVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALI 276
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
GY+QN +P E+ K+F EM V P+E +V ++SAC Q+ C L + +
Sbjct: 277 LGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNK 336
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
S + A++DM AKCG ++ AA++F + +R+LVS+ SM+ G A +G +A+ +F++
Sbjct: 337 FSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEK 396
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G PD++ F +L C L+ EG YF M + Y I +HYSC+++LL RTG
Sbjct: 397 MVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTG 456
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
LKEAYELI SMP + +AWG+LL C +HGN E+A + A +L L+P+ +G YVLL+N
Sbjct: 457 KLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSN 516
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLV 511
I A +W DV +R M + G+ KI G S +
Sbjct: 517 IYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 37/263 (14%)
Query: 224 LDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV-PEEHALVSVLSACGQLSC 282
++ P W+ ++ GYS E++ + MM G+ P+E+ V+ C
Sbjct: 66 FERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 283 LNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIA 342
+ +G +H V+ G V + + +D Y KC + +A +VF + ERN VSW +++
Sbjct: 126 VRVGSSVHG-LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 343 GYAANGQAKQAVNVFDQM--RCMGF-------------------------KPDDITFVNL 375
Y +G+ ++A ++FD M R +G K D I++ ++
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 376 LTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM---P 432
+ + GG + ++ F E G+ + +S +I + G EA+++ + M
Sbjct: 245 IDGYAKGGDMVSARDLF---EEARGVDVRA--WSALILGYAQNGQPNEAFKVFSEMCAKN 299
Query: 433 MQPCEAAWGALLNACRMHGNVEL 455
++P E L++AC G EL
Sbjct: 300 VKPDEFIMVGLMSACSQMGCFEL 322
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/451 (38%), Positives = 260/451 (57%), Gaps = 41/451 (9%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
+ A+ FD KD +W TM GYA R E A ELF M+ E NEV+
Sbjct: 140 FEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM----EKNEVSW------ 189
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
NA++ Y++CG L A F R V +W
Sbjct: 190 -----------------------------NAMISGYIECGDLEKASHFFKVAPVRGVVAW 220
Query: 205 TSMVNGYAKCGDLENARR-FLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
T+M+ GY K +E A F D T +KN+V+W+AM++GY +N++P++ LKLF M+ G+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
P L S L C +LS L LG IHQ V + + VT +++ MY KCG + A
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 324 EVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGG 383
++F + ++++V+WN+MI+GYA +G A +A+ +F +M +PD ITFV +L AC+H G
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
L++ G YF +M R+Y ++P+ +HY+CM+DLLGR G L+EA +LI SMP +P A +G L
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Query: 444 LNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVK 503
L ACR+H NVELA +A LL L+ +++ YV LANI A++ +W DV RVR M++ V
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
Query: 504 KIPGHSLVEVDGEFKEFLVADESHPQSEEIY 534
K+PG+S +E+ + F +D HP+ + I+
Sbjct: 520 KVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 148/332 (44%), Gaps = 40/332 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI GY + A F M+ + E+ + + C GD E S V
Sbjct: 158 WNTMITGYARRGEMEKARELFYSMM-EKNEVSWNAMISGYIEC----GDLEKASHFFKVA 212
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL-KDVVTWTTMFDGYASRNCSELAM 120
+ ++ +I Y ++ A +F + ++ K++VTW M GY + E +
Sbjct: 213 PV---RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+LF ML + PN L + L CS++ +++GR++H+ + K + + +L+ MY
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCG L A +LF+ M+ +DV +W +M++GYA+ G+ + A
Sbjct: 330 CKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA-------------------- 369
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
L LF EM+ + P+ V+VL AC +N+G + V + +
Sbjct: 370 -----------LCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISER 332
P ++D+ + G +E A ++ ++ R
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 14/175 (8%)
Query: 186 LVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQN 245
LV + L + +F ++ + GD++ A R KN ++W+++L G S++
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 246 -NKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL--NLGHWIHQHFVIEKGMHPS 302
++ E+ +LF E +PE S LSC N+ Q F +
Sbjct: 106 PSRMMEAHQLFDE------IPEP----DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA 155
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
+ N ++ YA+ G +E A E+F ++ E+N VSWN+MI+GY G ++A + F
Sbjct: 156 ASW-NTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF 209
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 307 NAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAAN-GQAKQAVNVFDQMRCMGF 365
N I+ + G I+ A VF+ + +N ++WNS++ G + + + +A +FD++
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP---- 120
Query: 366 KPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE--HYSCMIDLLGRTGLLKE 423
+PD ++ +L+ + Q +F M P ++ ++ MI R G +++
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRM-------PFKDAASWNTMITGYARRGEMEK 173
Query: 424 AYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
A EL SM M+ E +W A+++ G++E A
Sbjct: 174 ARELFYSM-MEKNEVSWNAMISGYIECGDLEKA 205
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 331 bits (848), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 292/540 (54%), Gaps = 35/540 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI GY + + F M V+ D + + ACE L G +H V
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
GF ++ V N L Y + G + A ++F KD+V+WTTM GY + A++
Sbjct: 325 TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+ +M + V+P+E+T+ AVLSAC+ +GD++ G +H+ K + + + N L++MY
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KC KC ++ A P KNV+SW++++AG
Sbjct: 445 KC-----------------------------KC--IDKALDIFHNIPRKNVISWTSIIAG 473
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
NN+ E+L +F M + P L + L+AC ++ L G IH H V+ G+
Sbjct: 474 LRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAH-VLRTGVGL 531
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
L NA+LDMY +CG + A FN+ ++++ SWN ++ GY+ GQ V +FD+M
Sbjct: 532 DDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMV 590
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
+PD+ITF++LL CS ++ +G YF ME +YG+ P +HY+C++DLLGR G L
Sbjct: 591 KSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGEL 649
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
+EA++ I MP+ P A WGALLNACR+H ++L LSA ++ LD + G Y+LL N+
Sbjct: 650 QEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLY 709
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIF 541
A+ KW +V +VR +M++ G+ G S VEV G+ FL D+ HPQ++EI VL+ +
Sbjct: 710 ADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFY 769
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 213/446 (47%), Gaps = 37/446 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRML-RHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN ++ GY K + A + RML V+ D +F L+ C + G+ VH V
Sbjct: 163 WNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV 222
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ G++ ++ V N LI Y G +K AR +FD +D+++W M GY +
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL 282
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
ELF M V+P+ +TL +V+SAC +GD +GR +H + +++ N+L MY
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+ GS A +LF RME +D+ SWT+M+ +
Sbjct: 343 LNAGSWREAEKLFSRMERKDIVSWTTMI-------------------------------S 371
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
GY N P +++ + M V P+E + +VLSAC L L+ G +H+ I+ +
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK-LAIKARLI 430
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
V +AN +++MY+KC I+ A ++F+ I +N++SW S+IAG N + +A+ QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
+ M +P+ IT L AC+ G + G+E + R G+ + ++D+ R G
Sbjct: 491 K-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGR 548
Query: 421 LKEAYELITSMPMQPCEAAWGALLNA 446
+ A+ S +W LL
Sbjct: 549 MNTAWSQFNSQKKDV--TSWNILLTG 572
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 205/427 (48%), Gaps = 43/427 (10%)
Query: 29 RVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHA 88
RV +D FV ++ CE EG V+ + + + N + + G L A
Sbjct: 89 RVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDA 148
Query: 89 REVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLML-RGDVEPNEVTLIAVLSACSQ 147
VF + S +++ +W + GYA + + AM L++ ML G V+P+ T VL C
Sbjct: 149 WYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGG 208
Query: 148 MGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM 207
+ D+ G+ VH ++ + +++ NAL+ MYVK
Sbjct: 209 IPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK------------------------- 243
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
CGD+++AR D+ P ++++SW+AM++GY +N E L+LF M G V P+
Sbjct: 244 ------CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
L SV+SAC L LG IH +VI G +++ N++ MY GS A ++F+
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHA-YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
+ +++VSW +MI+GY N +A++ + M KPD+IT +L+AC+ G +
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 388 GQEYFYTMERNYGIKPKREHY----SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
G E IK + Y + +I++ + + +A ++ ++P + +W ++
Sbjct: 417 GVEL-----HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV-ISWTSI 470
Query: 444 LNACRMH 450
+ R++
Sbjct: 471 IAGLRLN 477
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 33/264 (12%)
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
E AM+L N M V +E +A++ C E G +V+ + L NA
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
L M+V+ G+LV A +F +M R++FSW +V GYAK G +
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFD------------------ 177
Query: 237 AMLAGYSQNNKPKESLKLFHEMMG-AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
E++ L+H M+ GV P+ + VL CG + L G +H H V+
Sbjct: 178 -------------EAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH-VV 223
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
G + + NA++ MY KCG +++A +F+ + R+++SWN+MI+GY NG + +
Sbjct: 224 RYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLE 283
Query: 356 VFDQMRCMGFKPDDITFVNLLTAC 379
+F MR + PD +T ++++AC
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISAC 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 6/234 (2%)
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
L G N K +E++KL + M V +E V+++ C G ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALSSM 124
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
V L NA L M+ + G++ A VF +SERNL SWN ++ GYA G +A+ ++
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 359 QMRCM-GFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
+M + G KPD TF +L C ++ G+E + R YG + + + +I + +
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVK 243
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE--LARLSACNLLSLDPE 469
G +K A L MP + +W A+++ +G L A LS+DP+
Sbjct: 244 CGDVKSARLLFDRMPRRDI-ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/517 (35%), Positives = 282/517 (54%), Gaps = 31/517 (5%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN+MIRGY + NP+ A ++ MLR D +F + LKAC L G VH V
Sbjct: 74 IWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV 133
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K GF+ + V L+H Y G + + VF++ +VV W ++ G+ + N A+
Sbjct: 134 VKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAI 193
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
E F M V+ NE ++ +L AC + DI G+ H ++ D Y
Sbjct: 194 EAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG-----------FDPY 242
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
F +V TS+++ YAKCGDL AR D P + +VSW++++
Sbjct: 243 ------------FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIIT 290
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
GYSQN +E+L +F +M+ G+ P++ +SV+ A C LG IH +V + G
Sbjct: 291 GYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHA-YVSKTGFV 349
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+ A+++MYAK G E+A + F + +++ ++W +I G A++G +A+++F +M
Sbjct: 350 KDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRM 409
Query: 361 RCMG-FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
+ G PD IT++ +L ACSH GL+ EGQ YF M +G++P EHY CM+D+L R G
Sbjct: 410 QEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAG 469
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA-RLSACNLLSLDPED--SGIYVL 476
+EA L+ +MP++P WGALLN C +H N+EL R+ + + +PE+ SGIYVL
Sbjct: 470 RFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRS---MVAEPEELGSGIYVL 526
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
L+NI A +W DVK +R M+ K V K+ GHS VE
Sbjct: 527 LSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 175/376 (46%), Gaps = 42/376 (11%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L +AR VF+ V W +M GY++ + A+ + MLR P+ T VL A
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
CS + DI+ G VH + K ++ + LL MY+ C
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYM-C--------------------- 154
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
CG++ R + P NVV+W ++++G+ NN+ ++++ F EM GV
Sbjct: 155 ---------CGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVK 205
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP--------SVTLANAILDMYAKC 316
E +V +L ACG+ + G W H F+ G P +V LA +++DMYAKC
Sbjct: 206 ANETIMVDLLVACGRCKDIVTGKWFHG-FLQGLGFDPYFQSKVGFNVILATSLIDMYAKC 264
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G + A +F+ + ER LVSWNS+I GY+ NG A++A+ +F M +G PD +TF++++
Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI 324
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
A G GQ + + G ++++ +TG + A + + +
Sbjct: 325 RASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD- 382
Query: 437 EAAWGALLNACRMHGN 452
AW ++ HG+
Sbjct: 383 TIAWTVVIIGLASHGH 398
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 18/309 (5%)
Query: 173 HNALLDMYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLEN---ARRFLD 225
+ +L C SLV +L M R+V + +++ C + N AR +
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 226 QTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL 285
+V W++M+ GYS + P ++L + EM+ G P+ VL AC L +
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYA 345
G +H FV++ G ++ ++ +L MY CG + VF I + N+V+W S+I+G+
Sbjct: 126 GSCVHG-FVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFV 184
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
N + A+ F +M+ G K ++ V+LL AC I G+ +F+ + G P
Sbjct: 185 NNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK-WFHGFLQGLGFDPYF 243
Query: 406 EH--------YSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
+ + +ID+ + G L+ A L MP + +W +++ +G+ E A
Sbjct: 244 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTL-VSWNSIITGYSQNGDAEEAL 302
Query: 458 LSACNLLSL 466
++L L
Sbjct: 303 CMFLDMLDL 311
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 330 bits (846), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 188/570 (32%), Positives = 294/570 (51%), Gaps = 63/570 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCVV 60
WN +I GY + A + M+R R + + +G G+ +H V
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQV 165
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVF----DESSL------------------- 97
KLGF+S LLV + L++ YA+ G + A++VF D +++
Sbjct: 166 IKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDAL 225
Query: 98 -------KDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGD 150
KD V+W M G A ++ A+E F M ++ ++ +VL AC +G
Sbjct: 226 QLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGA 285
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNG 210
I G+++H + + N + + + +AL+DMY KC
Sbjct: 286 INEGKQIHACIIRTNFQDHIYVGSALIDMYCKC--------------------------- 318
Query: 211 YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
KC L A+ D+ KNVVSW+AM+ GY Q + +E++K+F +M +G+ P+ + L
Sbjct: 319 --KC--LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
+SAC +S L G H I G+ VT++N+++ +Y KCG I+ + +FN ++
Sbjct: 375 GQAISACANVSSLEEGSQFHGK-AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
R+ VSW +M++ YA G+A + + +FD+M G KPD +T +++ACS GL+ +GQ
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 391 YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMH 450
YF M YGI P HYSCMIDL R+G L+EA I MP P W LL+ACR
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNK 553
Query: 451 GNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSL 510
GN+E+ + +A +L+ LDP Y LL++I A++ KW V ++R MR+K VKK PG S
Sbjct: 554 GNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSW 613
Query: 511 VEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
++ G+ F DES P ++IY L+E+
Sbjct: 614 IKWKGKLHSFSADDESSPYLDQIYAKLEEL 643
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 199/389 (51%), Gaps = 15/389 (3%)
Query: 69 LLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR 128
L N L+ Y+ G + F++ +D VTW + +GY+ A++ +N M+R
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 129 GDVEPN--EVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSL 186
D N VTL+ +L S G + +G+++H + K L + + LL MY G +
Sbjct: 132 -DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 187 VAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNN 246
A+++F ++ R+ + S++ G CG +E+A + + K+ VSW+AM+ G +QN
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNG 249
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
KE+++ F EM G+ +++ SVL ACG L +N G IH +I + +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA-CIIRTNFQDHIYVG 308
Query: 307 NAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFK 366
+A++DMY KC + A VF+ + ++N+VSW +M+ GY G+A++AV +F M+ G
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 367 PDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY----SCMIDLLGRTGLLK 422
PD T ++AC++ + EG ++ I HY + ++ L G+ G +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 423 EAYELITSMPMQPCEAAWGALLNACRMHG 451
++ L M ++ +W A+++A G
Sbjct: 424 DSTRLFNEMNVRDA-VSWTAMVSAYAQFG 451
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 53/370 (14%)
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
+ +H N+ + L+N ++ Y S AR +FDR+ ++FSW +++ Y+K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM-GAGVVPEEHALVSV 273
G + ++ P ++ V+W+ ++ GYS + ++K ++ MM L+++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 274 LSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERN 333
L ++LG IH VI+ G + + + +L MYA G I A +VF + +RN
Sbjct: 146 LKLSSSNGHVSLGKQIHGQ-VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 334 L------------------------------VSWNSMIAGYAANGQAKQAVNVFDQMRCM 363
VSW +MI G A NG AK+A+ F +M+
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 364 GFKPDDITFVNLLTACSHGGLISEGQEYFYTMER-NYGIKPKREHY---SCMIDLLGRTG 419
G K D F ++L AC G I+EG++ + R N+ ++H S +ID+ +
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF-----QDHIYVGSALIDMYCKCK 319
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI----YV 475
L A + M Q +W A++ G E A + LD + SGI Y
Sbjct: 320 CLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAV-----KIFLDMQRSGIDPDHYT 373
Query: 476 LLANI--CAN 483
L I CAN
Sbjct: 374 LGQAISACAN 383
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 274/475 (57%), Gaps = 3/475 (0%)
Query: 80 ADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRG--DVEPNEVT 137
+D +L +A ++ D S + +M + E + + + +L D++P+ T
Sbjct: 51 SDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYT 110
Query: 138 LIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRME 197
+ ++ AC+ + E G +VH ++ ++ L+ +Y + G L + ++F+ +
Sbjct: 111 VNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIP 170
Query: 198 TRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHE 257
D T+MV A+CGD+ AR+ + P ++ ++W+AM++GY+Q + +E+L +FH
Sbjct: 171 CPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHL 230
Query: 258 MMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
M GV A++SVLSAC QL L+ G W H ++ + +V LA ++D+YAKCG
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGALDQGRWAHS-YIERNKIKITVRLATTLVDLYAKCG 289
Query: 318 SIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLT 377
+E A EVF + E+N+ +W+S + G A NG ++ + +F M+ G P+ +TFV++L
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 378 ACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE 437
CS G + EGQ +F +M +GI+P+ EHY C++DL R G L++A +I MPM+P
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA 409
Query: 438 AAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLM 497
A W +LL+A RM+ N+EL L++ +L L+ + G YVLL+NI A+ W +V VR M
Sbjct: 410 AVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSM 469
Query: 498 RDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
+ KGV+K PG S++EV+GE EF V D+SHP+ +I V +I L Y D
Sbjct: 470 KSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKAD 524
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 170/373 (45%), Gaps = 65/373 (17%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLR--HRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
N+MIR + K+ P +F ++ R+L + ++ D + F ++AC L G VH +
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKH-------------------------------AR 89
+ GFD++ V+ GLI YA+ G L AR
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 90 EVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
++F+ +D + W M GYA S A+ +F+LM V+ N V +I+VLSAC+Q+G
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
++ GR H +E+ ++ ++ L L+D+Y KCG + A E+F ME ++V++W+S +N
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
G A N ++ L+LF M GV P
Sbjct: 315 GLA-------------------------------MNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
VSVL C + ++ G E G+ P + ++D+YA+ G +E A + +
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 330 SER-NLVSWNSMI 341
+ + W+S++
Sbjct: 404 PMKPHAAVWSSLL 416
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 141/313 (45%), Gaps = 17/313 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI GY + A + F M V+++ + + L AC +L +G H +
Sbjct: 208 WNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE 267
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ + + L+ YA G ++ A EVF K+V TW++ +G A E +E
Sbjct: 268 RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLE 327
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMY 180
LF+LM + V PN VT ++VL CS +G ++ G+R ++M + + L + L+D+Y
Sbjct: 328 LFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLY 387
Query: 181 VKCGSLVAARELFDRMETRD-VFSWTSMVNGYAKCGDLE---NARRFLDQTPHKNVVSWS 236
+ G L A + +M + W+S+++ +LE A + + + N ++
Sbjct: 388 ARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYV 447
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
+ Y+ +N + M GV + SV+ G+ +H+ FV +
Sbjct: 448 LLSNIYADSNDWDNVSHVRQSMKSKGV--RKQPGCSVMEVNGE---------VHEFFVGD 496
Query: 297 KGMHPSVTLANAI 309
K HP T +A+
Sbjct: 497 KS-HPKYTQIDAV 508
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 301/538 (55%), Gaps = 20/538 (3%)
Query: 32 MDCRSFV---FALKACEELSGDFEGESVHCVVRKLGFDS--ELLVRNGLIHFYADRGWLK 86
M C S+ L+ C S G+ +H V+ G + N L FYA G +
Sbjct: 1 MKCLSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMV 60
Query: 87 HAREVFDESSL--KDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
A+++FDE L KD V WTT+ ++ +M+LF M R VE ++V+++ +
Sbjct: 61 TAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGV 120
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
C+++ D+ ++ H K + S+ + NAL+DMY KCG + + +F+ +E + V SW
Sbjct: 121 CAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM---GA 261
T +++ K LE R + P +N V+W+ M+AGY +E L+L EM+ G
Sbjct: 181 TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH 240
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIH------QHFVIEKGMHPSVTLANAILDMYAK 315
G+ L S+LSAC Q L +G W+H + + E+ + V + A++DMYAK
Sbjct: 241 GL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAK 298
Query: 316 CGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNL 375
CG+I+++ VF + +RN+V+WN++ +G A +G+ + +++F QM KPDD+TF +
Sbjct: 299 CGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAV 357
Query: 376 LTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQP 435
L+ACSH G++ EG F+++ R YG++PK +HY+CM+DLLGR GL++EA L+ MP+ P
Sbjct: 358 LSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPP 416
Query: 436 CEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRS 495
E G+LL +C +HG VE+A L+ + P ++ +L++N+ E + +R
Sbjct: 417 NEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRG 476
Query: 496 LMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTDI 553
+R +G++KIPG S + V+ F D SHP+++EIY L+E+ Y D+
Sbjct: 477 SLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDV 534
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 157/392 (40%), Gaps = 73/392 (18%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W T++ + + + F+ M R RVE+D S V C +L + H V
Sbjct: 79 WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV 138
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFD------------- 108
K+G + + V N L+ Y G + + +F+E K VV+WT + D
Sbjct: 139 KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGRE 198
Query: 109 ------------------GYASRNCSELAMELF-NLMLRGDVEPNEVTLIAVLSACSQMG 149
GY + +EL ++ R N VTL ++LSAC+Q G
Sbjct: 199 VFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Query: 150 DIEMGRRVHENMEKKNMRCS-------LNLHNALLDMYVKCGSLVAARELFDRMETRDVF 202
++ +GR VH KK M + + AL+DMY KCG++ ++ +F M R+V
Sbjct: 259 NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVV 318
Query: 203 SWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
+W ++ +G A G R +D P M
Sbjct: 319 TWNALFSGLAMHG---KGRMVIDMFPQ-----------------------------MIRE 346
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
V P++ +VLSAC ++ G W H + G+ P V ++D+ + G IE A
Sbjct: 347 VKPDDLTFTAVLSACSHSGIVDEG-WRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEA 405
Query: 323 AEVFNAIS-ERNLVSWNSMIAGYAANGQAKQA 353
+ + N V S++ + +G+ + A
Sbjct: 406 EILMREMPVPPNEVVLGSLLGSCSVHGKVEIA 437
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/473 (38%), Positives = 274/473 (57%), Gaps = 10/473 (2%)
Query: 87 HAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACS 146
H R + ES L +++ + + + + S +++ L M V P+ T +L +
Sbjct: 16 HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYL--RMRNHRVSPDFHTFPFLLPSFH 73
Query: 147 QMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTS 206
+ +G+R H + + + +LL+MY CG L +A+ +FD ++D+ +W S
Sbjct: 74 NPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNS 133
Query: 207 MVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM-----GA 261
+VN YAK G +++AR+ D+ P +NV+SWS ++ GY K KE+L LF EM A
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA 193
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
V P E + +VLSACG+L L G W+H ++ + + + L A++DMYAKCGS+E
Sbjct: 194 FVRPNEFTMSTVLSACGRLGALEQGKWVHA-YIDKYHVEIDIVLGTALIDMYAKCGSLER 252
Query: 322 AAEVFNAI-SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCM-GFKPDDITFVNLLTAC 379
A VFNA+ S++++ ++++MI A G + +F +M P+ +TFV +L AC
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Query: 380 SHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAA 439
H GLI+EG+ YF M +GI P +HY CM+DL GR+GL+KEA I SMPM+P
Sbjct: 313 VHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 372
Query: 440 WGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRD 499
WG+LL+ RM G+++ + L+ LDP +SG YVLL+N+ A +W +VK +R M
Sbjct: 373 WGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEV 432
Query: 500 KGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
KG+ K+PG S VEV+G EF+V DES +SE IY +LDEI Y TD
Sbjct: 433 KGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTD 485
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 169/392 (43%), Gaps = 71/392 (18%)
Query: 1 MWNTMIRGY-RKARNP--NIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVH 57
+WN +IR +P + S +LRM HRV D +F F L + G+ H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 58 CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
+ G D + VR L++ Y+ G L+ A+ VFD+S KD+ W ++ + YA +
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 118 LAMELFNLMLRGD------------------------------------VEPNEVTLIAV 141
A +LF+ M + V PNE T+ V
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 142 LSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDV 201
LSAC ++G +E G+ VH ++K ++ + L AL+DMY KCGSL A+ +F+ + ++
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK-- 263
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
K+V ++SAM+ + E +LF EM +
Sbjct: 264 ----------------------------KDVKAYSAMICCLAMYGLTDECFQLFSEMTTS 295
Query: 262 -GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
+ P V +L AC +N G + + E G+ PS+ ++D+Y + G I+
Sbjct: 296 DNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIK 355
Query: 321 AAAEVFNAIS-ERNLVSWNSMIAGYAANGQAK 351
A ++ E +++ W S+++G G K
Sbjct: 356 EAESFIASMPMEPDVLIWGSLLSGSRMLGDIK 387
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 229/341 (67%), Gaps = 2/341 (0%)
Query: 201 VFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
++ S+++ YA CGD+ +A + D+ P K++V+W++++ G+++N KP+E+L L+ EM
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 261 AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
G+ P+ +VS+LSAC ++ L LG +H ++I+ G+ ++ +N +LD+YA+CG +E
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHV-YMIKVGLTRNLHSSNVLLDLYARCGRVE 141
Query: 321 AAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCM-GFKPDDITFVNLLTAC 379
A +F+ + ++N VSW S+I G A NG K+A+ +F M G P +ITFV +L AC
Sbjct: 142 EAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC 201
Query: 380 SHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAA 439
SH G++ EG EYF M Y I+P+ EH+ CM+DLL R G +K+AYE I SMPMQP
Sbjct: 202 SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 261
Query: 440 WGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRD 499
W LL AC +HG+ +LA + +L L+P SG YVLL+N+ A+E++W DV+++R M
Sbjct: 262 WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLR 321
Query: 500 KGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
GVKK+PGHSLVEV EFL+ D+SHPQS+ IY L E+
Sbjct: 322 DGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 161/318 (50%), Gaps = 35/318 (11%)
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
GE++H VV + GF S + V+N L+H YA+ G + A +VFD+ KD+V W ++ +G+A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL 172
E A+ L+ M ++P+ T++++LSAC+++G + +G+RVH M K + +L+
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 173 HNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV 232
N LLD+Y +CG + A+ LFD M ++ SWTS++ G A
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA-------------------- 166
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGA-GVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
N KE+++LF M G++P E V +L AC + G +
Sbjct: 167 -----------VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFR 215
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQA 350
E + P + ++D+ A+ G ++ A E ++ + N+V W +++ +G +
Sbjct: 216 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 275
Query: 351 KQAVNVFDQMRCMGFKPD 368
A F +++ + +P+
Sbjct: 276 DLA--EFARIQILQLEPN 291
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 96/169 (56%), Gaps = 3/169 (1%)
Query: 283 LNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIA 342
+ LG IH VI G + + N++L +YA CG + +A +VF+ + E++LV+WNS+I
Sbjct: 4 VRLGETIHS-VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 343 GYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIK 402
G+A NG+ ++A+ ++ +M G KPD T V+LL+AC+ G ++ G+ M + G+
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLT 121
Query: 403 PKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
+ ++DL R G ++EA L M + +W +L+ ++G
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 9/280 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++I G+ + P A + + M ++ D + V L AC ++ G+ VH +
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K+G L N L+ YA G ++ A+ +FDE K+ V+WT++ G A + A+E
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 122 LFNLMLRGD-VEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLDM 179
LF M + + P E+T + +L ACS G ++ G M E+ + + ++D+
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 236
Query: 180 YVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGD---LENARRFLDQTPHKNVVSW 235
+ G + A E M + +V W +++ GD E AR + Q + +
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 296
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGV--VPEEHALVSV 273
+ Y+ + + K+ +M+ GV VP H+LV V
Sbjct: 297 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVP-GHSLVEV 335
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 281/460 (61%), Gaps = 11/460 (2%)
Query: 93 DESSLKDVVTWTTMFDGYASRN--CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQM-- 148
++S+ + V+WT+ + +RN +E A E ++ L G VEPN +T IA+LS C
Sbjct: 29 NQSTSETTVSWTSRIN-LLTRNGRLAEAAKEFSDMTLAG-VEPNHITFIALLSGCGDFTS 86
Query: 149 GDIEMGRRVHENMEKKNM-RCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM 207
G +G +H K + R + + A++ MY K G AR +FD ME ++ +W +M
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
++GY + G ++NA + D+ P ++++SW+AM+ G+ + +E+L F EM +GV P+
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
A+++ L+AC L L+ G W+H+ +V+ + +V ++N+++D+Y +CG +E A +VF
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHR-YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
+ +R +VSWNS+I G+AANG A +++ F +M+ GFKPD +TF LTACSH GL+ E
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
G YF M+ +Y I P+ EHY C++DL R G L++A +L+ SMPM+P E G+LL AC
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385
Query: 448 RMHG-NVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIP 506
HG N+ LA +L L+ + YV+L+N+ A + KW ++R M+ G+KK P
Sbjct: 386 SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445
Query: 507 GHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSEL 546
G S +E+D F+ D +H ++ I +VL+ +SS+L
Sbjct: 446 GFSSIEIDDCMHVFMAGDNAHVETTYIREVLE--LISSDL 483
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 196/485 (40%), Gaps = 103/485 (21%)
Query: 22 FLRMLRHRVEMDCRSFVFALKACEELSGDFE--GESVHCVVRKLGFD-SELLVRNGLIHF 78
F M VE + +F+ L C + + E G+ +H KLG D + ++V +I
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 79 YADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD-------- 130
Y+ RG K AR VFD K+ VTW TM DGY + A ++F+ M D
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 131 -----------------------VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
V+P+ V +IA L+AC+ +G + G VH + ++ +
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 238
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQT 227
++ + N+L+D+Y +CG + AR++F ME R V SW S++ G+A
Sbjct: 239 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFA--------------- 283
Query: 228 PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
N ESL F +M G P+ L+AC + + G
Sbjct: 284 ----------------ANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAA 346
Q + + P + ++D+Y++ G +E A ++ ++ + N V S++A +
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSN 387
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS-----------EGQEYFYTM 395
+G N+ R M D L SH + EG
Sbjct: 388 HGN-----NIVLAERLMKHLTD-------LNVKSHSNYVILSNMYAADGKWEGASKMRRK 435
Query: 396 ERNYGIKPKREHYSCMID------LLG-----RTGLLKEAYELITS-MPMQPC--EAAWG 441
+ G+K + S ID + G T ++E ELI+S + +Q C E G
Sbjct: 436 MKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETLAG 495
Query: 442 ALLNA 446
LLNA
Sbjct: 496 DLLNA 500
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 122/276 (44%), Gaps = 22/276 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI G+ K A +F M V+ D + + AL AC L G VH V
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
F + + V N LI Y G ++ AR+VF + VV+W ++ G+A+ + ++
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL--HNALLDM 179
F M +P+ VT L+ACS +G +E G R + M K + R S + + L+D+
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM-KCDYRISPRIEHYGCLVDL 352
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNG--YAKCGDLEN----ARRF------LDQT 227
Y + G L A +L M + +V G A C + N A R L+
Sbjct: 353 YSRAGRLEDALKLVQSMPMKP----NEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVK 408
Query: 228 PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
H N V S M Y+ + K + + K+ +M G G+
Sbjct: 409 SHSNYVILSNM---YAADGKWEGASKMRRKMKGLGL 441
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 325 bits (834), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 286/490 (58%), Gaps = 4/490 (0%)
Query: 52 EGESVHCVVRKLGFDSELLVRNGLIHFY-ADRGWLKHAREVFDESSLKDVVTWTTMFDGY 110
E + +H + K G S+ + + ++ F A + +A VF + K+ W T+ G+
Sbjct: 40 ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGF 99
Query: 111 ASRNCSELAMELFNLML--RGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRC 168
+ + E+A+ +F ML V+P +T +V A ++G GR++H + K+ +
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLED 159
Query: 169 SLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP 228
+ N +L MYV CG L+ A +F M DV +W SM+ G+AKCG ++ A+ D+ P
Sbjct: 160 DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
+N VSW++M++G+ +N + K++L +F EM V P+ +VS+L+AC L G W
Sbjct: 220 QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG 348
IH++ V + S+ + A++DMY KCG IE VF ++ L WNSMI G A NG
Sbjct: 280 IHEYIVRNRFELNSIVV-TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNG 338
Query: 349 QAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY 408
++A+++F ++ G +PD ++F+ +LTAC+H G + E+F M+ Y I+P +HY
Sbjct: 339 FEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHY 398
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP 468
+ M+++LG GLL+EA LI +MP++ W +LL+ACR GNVE+A+ +A L LDP
Sbjct: 399 TLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDP 458
Query: 469 EDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHP 528
+++ YVLL+N A+ + + R LM+++ ++K G S +EVD E EF+ +HP
Sbjct: 459 DETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHP 518
Query: 529 QSEEIYKVLD 538
+S EIY +LD
Sbjct: 519 KSAEIYSLLD 528
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 182/428 (42%), Gaps = 74/428 (17%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVF--ALKACEELSGDFEGESVHC 58
+WNT+IRG+ ++ P +A S F+ ML + + + KA L +G +H
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 59 VVRKLGFDSELLVRNGLIHFY-------------------------------ADRGWLKH 87
+V K G + + +RN ++H Y A G +
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 88 AREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQ 147
A+ +FDE ++ V+W +M G+ + A+++F M DV+P+ T++++L+AC+
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 148 MGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM 207
+G E GR +HE + + + + AL+DMY KCG + +F+ + + W SM
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSM 330
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
+ G A G E A + LF E+ +G+ P+
Sbjct: 331 ILGLANNGFEERA-------------------------------MDLFSELERSGLEPDS 359
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI-EAAAEVF 326
+ + VL+AC ++ + + + PS+ ++++ G + EA A +
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 327 NAISERNLVSWNSMIAGYAANGQ---AKQAVNVFDQMRCMGFKPDDIT-FVNLLTACSHG 382
N E + V W+S+++ G AK+A ++ PD+ +V L A +
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL-----DPDETCGYVLLSNAYASY 474
Query: 383 GLISEGQE 390
GL E E
Sbjct: 475 GLFEEAVE 482
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 300/550 (54%), Gaps = 39/550 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDF--EGESVHC 58
++N+MI Y + +NP+ + +M+ +++ D +F +KAC LSG +GE+V C
Sbjct: 83 VYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC--LSGLVLEKGEAVWC 140
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
G+ +++ V + +++ Y G + A +F + + +DV+ WTTM G+A S
Sbjct: 141 KAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLK 200
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+E + M + V ++ +L A +GD +MGR VH + + + ++ + +L+D
Sbjct: 201 AVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVD 260
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY AK G +E A R + K VSW ++
Sbjct: 261 MY-------------------------------AKVGFIEVASRVFSRMMFKTAVSWGSL 289
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
++G++QN ++ + EM G P+ LV VL AC Q+ L G +H +++++
Sbjct: 290 ISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHC-YILKRH 348
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ VT A A++DMY+KCG++ ++ E+F + ++LV WN+MI+ Y +G ++ V++F
Sbjct: 349 VLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFL 407
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M +PD TF +LL+A SH GL+ +GQ +F M Y I+P +HY C+IDLL R
Sbjct: 408 KMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARA 467
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G ++EA ++I S + W ALL+ C H N+ + ++A +L L+P+ GI L++
Sbjct: 468 GRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
N A KW +V +VR LMR+ ++K+PG+S +EV+GE + FL+ D SH + + +VL
Sbjct: 528 NFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLR 587
Query: 539 EIFLSSELED 548
L +E+ D
Sbjct: 588 N--LKTEIRD 595
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 179/371 (48%), Gaps = 37/371 (9%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
G + +AR+VFDE + V + +M Y+ + + L++ M+ ++P+ T +
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVF 202
AC +E G V + + + +++L++Y+KCG + A LF +M RDV
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 203 SWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
WT+MV G+A+ G K ++++ + EM G
Sbjct: 184 CWTTMVTGFAQAG-------------------------------KSLKAVEFYREMQNEG 212
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
+ ++ +L A G L +G +H ++ G+ +V + +++DMYAK G IE A
Sbjct: 213 FGRDRVVMLGLLQASGDLGDTKMGRSVHG-YLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 323 AEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
+ VF+ + + VSW S+I+G+A NG A +A +M+ +GF+PD +T V +L ACS
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 383 GLISEGQ-EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWG 441
G + G+ + Y ++R+ R + ++D+ + G L + E+ + + W
Sbjct: 332 GSLKTGRLVHCYILKRHV---LDRVTATALMDMYSKCGALSSSREIFEHVGRKDL-VCWN 387
Query: 442 ALLNACRMHGN 452
+++ +HGN
Sbjct: 388 TMISCYGIHGN 398
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 120/242 (49%), Gaps = 7/242 (2%)
Query: 212 AKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
+ G++ AR+ D+ P + V +++M+ YS+ P E L+L+ +M+ + P+
Sbjct: 61 GRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFT 120
Query: 272 SVLSACGQLSCLNLGH--WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+ AC L G W ++ G V + +++L++Y KCG ++ A +F +
Sbjct: 121 MTIKACLSGLVLEKGEAVWCK---AVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKM 177
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
++R+++ W +M+ G+A G++ +AV + +M+ GF D + + LL A G G+
Sbjct: 178 AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGR 237
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRM 449
+ R G+ + ++D+ + G ++ A + + M M +WG+L++
Sbjct: 238 SVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRM-MFKTAVSWGSLISGFAQ 295
Query: 450 HG 451
+G
Sbjct: 296 NG 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 311 DMYAKCG---SIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKP 367
D+ A CG I A +VF+ + +R + +NSMI Y+ + + ++DQM +P
Sbjct: 55 DLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 368 DDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYEL 427
D TF + AC GL+ E E + ++G K S +++L + G + EA L
Sbjct: 115 DSSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVL 173
Query: 428 ITSM 431
M
Sbjct: 174 FGKM 177
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 310/583 (53%), Gaps = 44/583 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN++++ A + M + + D L+AC L + H V
Sbjct: 125 LWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
++G L V N L+ Y G + A +F E +++ ++W M G++ E A+
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIE---------------------------- 152
++F M R + +P+EVT +VLS SQ G E
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVC 304
Query: 153 -------MGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWT 205
+ +VH + K L NAL+ +Y K G + A LF ++ + + SW
Sbjct: 305 AELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 206 SMVNGYAKCGDLENARRF---LDQTPH-----KNVVSWSAMLAGYSQNNKPKESLKLFHE 257
S++ + G L+ A L++ H NVV+W++++ G + + +SL+ F +
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 258 MMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
M + V+ + +LS C +L LNLG IH H VI M ++ + NA+++MYAKCG
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGH-VIRTSMSENILVQNALVNMYAKCG 483
Query: 318 SIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLT 377
+ + VF AI +++L+SWNS+I GY +G A++A+++FD+M GF PD I V +L+
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLS 543
Query: 378 ACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE 437
ACSH GL+ +G+E FY+M + +G++P++EHY+C++DLLGR G LKEA E++ +MPM+P
Sbjct: 544 ACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Query: 438 AAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLM 497
GALLN+CRMH NV++A A L L+PE +G Y+LL+NI + +W + VR+L
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALA 663
Query: 498 RDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
+ K +KK+ G S +EV + +F + E IY VL+++
Sbjct: 664 KKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 171/346 (49%), Gaps = 17/346 (4%)
Query: 67 SELLVRNG-----LIHFYADRGWLKHAREVFDESSL---KDVVTWTTMFDGYASRNCSEL 118
S+ + R+G LI YA G L AR VF+ SL D+ W ++ S E
Sbjct: 82 SDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYEN 141
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+EL+ M + + + L +L AC +G + R H + + ++ +L++ N LL
Sbjct: 142 ALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLT 201
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV----VS 234
+Y K G + A LF M R+ SW M+ G+++ D E+A + + + V+
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVT 261
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
W+++L+ +SQ K ++ LK FH M +G AL S C +L L++ +H +V
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHG-YV 320
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
I+ G + NA++ +Y K G ++ A +F I + + SWNS+I + G+ +A+
Sbjct: 321 IKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEAL 380
Query: 355 NVFDQMRCM----GFKPDDITFVNLLTACSHGGLISEGQEYFYTME 396
++F ++ M K + +T+ +++ C+ G + EYF M+
Sbjct: 381 SLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE---RNLVSWNSMIAGYA 345
+H ++ + S +LA ++ +YA+ G + A VF +S +L WNS++
Sbjct: 75 VHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANV 134
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
++G + A+ ++ MR G D +L AC + G + F+T G+K
Sbjct: 135 SHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRA-FHTQVIQIGLKENL 193
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
+ ++ L + G + +AY L MP++ +W ++
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMPVRN-RMSWNVMIKG 233
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 305/612 (49%), Gaps = 77/612 (12%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN MI+G+ A ++ RM+ V+ D ++ F +K+ +S EG+ +H +V
Sbjct: 97 LWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMV 156
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
KLGF S++ V N LI Y G A +VF+E +D+V+W +M GY + ++
Sbjct: 157 IKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSL 216
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQM-------------------------------- 148
LF ML+ +P+ + ++ L ACS +
Sbjct: 217 MLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Query: 149 ----GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM-------- 196
G++ R+ M ++N+ N ++ Y + G + A F +M
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVA----WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
Query: 197 ---------------ETRDVFSW-------------TSMVNGYAKCGDLENARRFLDQTP 228
E R + + T++++ Y +CG L++A D+
Sbjct: 333 DVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
KNV+SW++++A Y QN K +L+LF E+ + +VP+ + S+L A + L+ G
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG 348
IH + V + ++ L N+++ MYA CG +E A + FN I +++VSWNS+I YA +G
Sbjct: 453 IHAYIVKSRYWSNTIIL-NSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 349 QAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY 408
+ +V +F +M P+ TF +LL ACS G++ EG EYF +M+R YGI P EHY
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP 468
CM+DL+GRTG A + MP P WG+LLNA R H ++ +A +A + ++
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEH 631
Query: 469 EDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHP 528
+++G YVLL N+ A +W DV R++ LM KG+ + S VE G+ F D SH
Sbjct: 632 DNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHV 691
Query: 529 QSEEIYKVLDEI 540
+ +IY+VLD +
Sbjct: 692 ATNKIYEVLDVV 703
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 180/375 (48%), Gaps = 40/375 (10%)
Query: 79 YADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTL 138
+AD ++ A ++FDE + D W M G+ S A++ ++ M+ V+ + T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 139 IAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET 198
V+ + + + +E G+++H + K + + N+L+ +Y+K G A ++F+ M
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 199 RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM 258
RD+ SW SM++GY GD G+S SL LF EM
Sbjct: 194 RDIVSWNSMISGYLALGD------------------------GFS-------SLMLFKEM 222
Query: 259 MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGS 318
+ G P+ + +S L AC + +G IH H V + V + +ILDMY+K G
Sbjct: 223 LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGE 282
Query: 319 IEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCM-GFKPDDITFVNLLT 377
+ A +FN + +RN+V+WN MI YA NG+ A F +M G +PD IT +NLL
Sbjct: 283 VSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP 342
Query: 378 ACSHGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
A + I EG+ + Y M R G P + +ID+ G G LK A E+I +
Sbjct: 343 ASA----ILEGRTIHGYAMRR--GFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKN 395
Query: 437 EAAWGALLNACRMHG 451
+W +++ A +G
Sbjct: 396 VISWNSIIAAYVQNG 410
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 11/273 (4%)
Query: 195 RMETRDVFSWTSMVN---------GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQN 245
R+ RD + T VN G+A +E+A + D+ + W+ M+ G++
Sbjct: 49 RLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSC 108
Query: 246 NKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTL 305
E+++ + M+ AGV + V+ + +S L G IH VI+ G V +
Sbjct: 109 GLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHA-MVIKLGFVSDVYV 167
Query: 306 ANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGF 365
N+++ +Y K G A +VF + ER++VSWNSMI+GY A G ++ +F +M GF
Sbjct: 168 CNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGF 227
Query: 366 KPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAY 425
KPD + ++ L ACSH G+E R+ + ++D+ + G + A
Sbjct: 228 KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287
Query: 426 ELITSMPMQPCEAAWGALLNACRMHGNVELARL 458
+ M +Q AW ++ +G V A L
Sbjct: 288 RIFNGM-IQRNIVAWNVMIGCYARNGRVTDAFL 319
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 322 bits (825), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 280/534 (52%), Gaps = 36/534 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE---GESVHC 58
W+TM+ GY A F LR + E +VF L+ G +HC
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFT-AVLSSLAATIYVGLGRQIHC 245
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
+ K G + + N L+ Y+ L A ++FD S ++ +TW+ M GY+ S
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 305
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A++LF+ M ++P+E T++ VL+ACS + +E G+++H + K
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE----------- 354
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
R +F+ T++V+ YAK G L +AR+ D ++V W+++
Sbjct: 355 --------------------RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSL 394
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
++GY QN+ +E+L L+ M AG++P + + SVL AC L+ L LG +H H I+ G
Sbjct: 395 ISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH-TIKHG 453
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
V + +A+ MY+KCGS+E VF +++VSWN+MI+G + NGQ +A+ +F+
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M G +PDD+TFVN+++ACSH G + G YF M G+ PK +HY+CM+DLL R
Sbjct: 514 EMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRA 573
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G LKEA E I S + W LL+AC+ HG EL + L++L +S YV L+
Sbjct: 574 GQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLS 633
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEE 532
I + DV+RV MR GV K G S +E+ ++ F+V D HP EE
Sbjct: 634 GIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 231/493 (46%), Gaps = 74/493 (15%)
Query: 2 WNTMIRGYRKARNPNIAFSY-FLRMLRHRVEMDCRSFVFAL----KACEELSGDFEGESV 56
WN++I GY ++N I+ SY +++ R D + L KA L G
Sbjct: 83 WNSLITGY--SQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA 140
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
H +V K+ ++ V L+ Y G ++ +VF ++ TW+TM GYA+R
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 117 ELAMELFNLMLRGDVE--PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
E A+++FNL LR E ++ AVLS+ + + +GR++H K + + L N
Sbjct: 201 EEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
AL+ MY KC SL A ++FD R+ +W++MV
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT------------------------- 295
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
GYSQN + E++KLF M AG+ P E+ +V VL+AC + L G +H F+
Sbjct: 296 ------GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS-FL 348
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
++ G + A++DMYAK G + A + F+ + ER++ W S+I+GY N ++A+
Sbjct: 349 LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEAL 408
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIK----------- 402
++ +M+ G P+D T ++L ACS + G++ + +T++ +G++
Sbjct: 409 ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMY 468
Query: 403 ----------------PKRE--HYSCMIDLLGRTGLLKEAYELITSM---PMQPCEAAWG 441
P ++ ++ MI L G EA EL M M+P + +
Sbjct: 469 SKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFV 528
Query: 442 ALLNACRMHGNVE 454
+++AC G VE
Sbjct: 529 NIISACSHKGFVE 541
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 205/424 (48%), Gaps = 40/424 (9%)
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
G +VH + + G + + N L++FYA G L A +F+ KDVV+W ++ GY+
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 113 R---NCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS 169
+ S M+LF M D+ PN TL + A S + +GR+ H + K +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPH 229
+ + +L+ MY K G + ++F M R+ ++W++MV+GYA G +E A + +
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN---- 208
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
L L + G+ ++ +VLS+ + LG I
Sbjct: 209 ----------------------LFLREKEEGS---DSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQ 349
H I+ G+ V L+NA++ MY+KC S+ A ++F++ +RN ++W++M+ GY+ NG+
Sbjct: 244 HC-ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYS 409
+ +AV +F +M G KP + T V +L ACS + EG++ ++ G + +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQ-LHSFLLKLGFERHLFATT 361
Query: 410 CMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA-----RLSACNLL 464
++D+ + G L +A + + + A W +L++ + + E A R+ ++
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDV-ALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 465 SLDP 468
DP
Sbjct: 421 PNDP 424
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 127 LRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSL 186
+ ++ P+ TL+ L+ SQ ++ GR VH + + + N L++ Y KCG L
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 187 VAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNN 246
A +F+ + +DV SW S++ GY++ G + + S++ M
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISS--------------SYTVM-------- 103
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
+LF EM ++P + L + A L +G H V++ + +
Sbjct: 104 ------QLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA-LVVKMSSFGDIYVD 156
Query: 307 NAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+++ MY K G +E +VF + ERN +W++M++GYA G+ ++A+ VF+
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+W ++I GY + + A + RM + + + LKAC L+ G+ VH
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K GF E+ + + L Y+ G L+ VF + KDVV+W M G + + A+
Sbjct: 450 IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 509
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDM 179
ELF ML +EP++VT + ++SACS G +E G M + + ++ + ++D+
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDL 569
Query: 180 YVKCGSLVAARELFD 194
+ G L A+E +
Sbjct: 570 LSRAGQLKEAKEFIE 584
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAE 324
P L+ L+ Q L G +H +I G + AN +++ YAKCG + A
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQ-IIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 325 VFNAISERNLVSWNSMIAGYAANGQAKQAVNV---FDQMRCMGFKPDDITFVNLLTACSH 381
+FNAI +++VSWNS+I GY+ NG + V F +MR P+ T + A S
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWG 441
+ G++ + + S ++ + + GL+++ ++ MP + W
Sbjct: 131 LQSSTVGRQAHALVVKMSSFGDIYVDTS-LVGMYCKAGLVEDGLKVFAYMP-ERNTYTWS 188
Query: 442 ALLNACRMHGNVELA 456
+++ G VE A
Sbjct: 189 TMVSGYATRGRVEEA 203
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 289/549 (52%), Gaps = 32/549 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W +I G A +YF M R D +F ALKAC L G+++H V
Sbjct: 177 WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVI 236
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
GF + L V N L Y + G ++ +F+ S +DVV+WT++ Y A+E
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
F M V PNE T ++ SAC+ + + G ++H N+ + SL++ N+++ MY
Sbjct: 297 TFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYS 356
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
CG+LV+A LF M RD+ SW++++ GY + AG
Sbjct: 357 TCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ--------------------------AG 390
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
+ + E K F M +G P + AL S+LS G ++ + G +H + G+
Sbjct: 391 FGE-----EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHA-LALCFGLEQ 444
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ T+ +++++MY+KCGSI+ A+ +F ++VS +MI GYA +G++K+A+++F++
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
+GF+PD +TF+++LTAC+H G + G YF M+ Y ++P +EHY CM+DLL R G L
Sbjct: 505 KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRL 564
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
+A ++I M + + W LL AC+ G++E R +A +L LDP + V LANI
Sbjct: 565 SDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIY 624
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIF 541
++ + VR M+ KGV K PG S +++ F+ D HPQSE+IY +L+
Sbjct: 625 SSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAV 684
Query: 542 LSSELEDYD 550
+E +D
Sbjct: 685 SGAEAHRFD 693
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 201/425 (47%), Gaps = 35/425 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYF--LRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV 59
W ++I+ Y A N + A F +R++ H V D LKAC + S GES+H
Sbjct: 74 WTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAY 133
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K S + V + L+ Y G + + VF E ++ VTWT + G +
Sbjct: 134 AVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEG 193
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ F+ M R + + T L AC+ + ++ G+ +H ++ + +L + N+L M
Sbjct: 194 LTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATM 253
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y +CG + LF+ M RDV SWTS++ Y + G
Sbjct: 254 YTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG------------------------ 289
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+ ++++ F +M + V P E S+ SAC LS L G +H + V+ G+
Sbjct: 290 -------QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN-VLSLGL 341
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ S++++N+++ MY+ CG++ +A+ +F + R+++SW+++I GY G ++ F
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
MR G KP D +LL+ + +I EG + + +G++ S +I++ + G
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460
Query: 420 LLKEA 424
+KEA
Sbjct: 461 SIKEA 465
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 34/302 (11%)
Query: 81 DRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD--VEPNEVTL 138
+ G L+ AR+VFD+ D+V+WT++ Y + N S+ A+ LF+ M D V P+ L
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 139 IAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET 198
VL AC Q +I G +H K ++ S+ + ++LLDMY + G + + +F M
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 199 RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM 258
R+ +WT+++ G G + KE L F EM
Sbjct: 172 RNAVTWTAIITGLVHAG-------------------------------RYKEGLTYFSEM 200
Query: 259 MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGS 318
+ + + + L AC L + G IH H VI +G ++ +AN++ MY +CG
Sbjct: 201 SRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH-VIVRGFVTTLCVANSLATMYTECGE 259
Query: 319 IEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
++ +F +SER++VSW S+I Y GQ +AV F +MR P++ TF ++ +A
Sbjct: 260 MQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSA 319
Query: 379 CS 380
C+
Sbjct: 320 CA 321
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM--M 259
F S + G+L AR+ D+ PH ++VSW++++ Y N E+L LF M +
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 260 GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI 319
V P+ L VL ACGQ S + G +H + ++ + SV + +++LDMY + G I
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHA-YAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 320 EAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTAC 379
+ + VF+ + RN V+W ++I G G+ K+ + F +M D TF L AC
Sbjct: 160 DKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC 219
Query: 380 S 380
+
Sbjct: 220 A 220
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 180/555 (32%), Positives = 285/555 (51%), Gaps = 34/555 (6%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCV 59
+WN M+ Y + +F F +M + + ++ LK C L GD E GE +H
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL-GDLELGEQIHSQ 515
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ K F V + LI YA G L A ++ + KDVV+WTTM GY N + A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ F ML + +EV L +SAC+ + ++ G+++H L NAL+ +
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y ++CG +E + +QT + ++W+A++
Sbjct: 636 Y-------------------------------SRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+G+ Q+ +E+L++F M G+ S + A + + + G +H + + G
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA-VITKTGY 723
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ NA++ MYAKCGSI A + F +S +N VSWN++I Y+ +G +A++ FDQ
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ 783
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M +P+ +T V +L+ACSH GL+ +G YF +M YG+ PK EHY C++D+L R G
Sbjct: 784 MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 843
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
LL A E I MP++P W LL+AC +H N+E+ +A +LL L+PEDS YVLL+N
Sbjct: 844 LLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 903
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
+ A +KW R M++KGVKK PG S +EV F V D++HP ++EI++ +
Sbjct: 904 LYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQD 963
Query: 540 IFLSSELEDYDTDIF 554
+ + Y D F
Sbjct: 964 LTKRASEIGYVQDCF 978
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 210/450 (46%), Gaps = 34/450 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NT+I G + A F RM +E D + + AC F G+ +H
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
KLGF S + L++ YA ++ A + F E+ +++VV W M Y + +
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F M ++ PN+ T ++L C ++GD+E+G ++H + K N + + + + L+DMY
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K G L A ++ R +DV SWT+M+ AG
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMI-------------------------------AG 565
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y+Q N ++L F +M+ G+ +E L + +SAC L L G IH + G
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACV-SGFSS 624
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ NA++ +Y++CG IE + F + ++WN++++G+ +G ++A+ VF +M
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G ++ TF + + A S + +G++ + + G + E + +I + + G +
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSI 743
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHG 451
+A + + + E +W A++NA HG
Sbjct: 744 SDAEKQFLEVSTKN-EVSWNAIINAYSKHG 772
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 205/459 (44%), Gaps = 42/459 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI G K A F M + +F L AC+++ GE +H +V
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
KLGF S+ V N L+ Y G L A +F S +D VT+ T+ +G + E AME
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF M +EP+ TL +++ ACS G + G+++H K + + ALL++Y
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KC + A + F E +V W M+ Y DL N
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN---------------------- 473
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
S ++F +M +VP ++ S+L C +L L LG IH +I+
Sbjct: 474 ---------SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ-IIKTNFQL 523
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ + + ++DMYAK G ++ A ++ + +++VSW +MIAGY +A+ F QM
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G + D++ N ++AC+ + EGQ+ + G + ++ L R G +
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 422 KEAYELITSMPMQPCEA----AWGALLNACRMHGNVELA 456
+E+Y + + EA AW AL++ + GN E A
Sbjct: 643 EESY-----LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 186/370 (50%), Gaps = 37/370 (10%)
Query: 41 LKACEELSGDF-EGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKD 99
L+ C + +G EG +H + KLG DS + L FY +G L A +VFDE +
Sbjct: 91 LEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT 150
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDI--EMGRRV 157
+ TW M ASRN LF M+ +V PNE T VL AC + G + ++ ++
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQI 209
Query: 158 HENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDL 217
H + + +R S + N L+D+Y + NG+ DL
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSR--------------------------NGFV---DL 240
Query: 218 ENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC 277
ARR D K+ SW AM++G S+N E+++LF +M G++P +A SVLSAC
Sbjct: 241 --ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 278 GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSW 337
++ L +G +H V++ G + NA++ +Y G++ +A +F+ +S+R+ V++
Sbjct: 299 KKIESLEIGEQLHG-LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 338 NSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE-YFYTME 396
N++I G + G ++A+ +F +M G +PD T +L+ ACS G + GQ+ + YT +
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 397 RNYGIKPKRE 406
+ K E
Sbjct: 418 LGFASNNKIE 427
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Query: 262 GVVPEEHALVSVLSACGQLS-CLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
G+ P L +L C + + L+ G +H +++ G+ + L+ + D Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQ-ILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 321 AAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS 380
A +VF+ + ER + +WN MI A+ + +F +M P++ TF +L AC
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 381 HGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAW 440
G + + E + G++ + +IDL R G + A + + ++ ++W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD-HSSW 256
Query: 441 GALLNA 446
A+++
Sbjct: 257 VAMISG 262
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 283/541 (52%), Gaps = 75/541 (13%)
Query: 70 LVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRG 129
++ LI Y ++G ++ AR +FDE +DVV WT M GYAS N + A E F+ M++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 130 DVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCG-SLVA 188
PNE TL +VL +C M + G VH + K M SL + NA+++MY C ++ A
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 189 ARELFDRMETRDVFSWTSMVNGYAKCGD------------LENAR-------------RF 223
A +F ++ ++ +WT+++ G+ GD LENA
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 224 LDQTPHKNVVSWSAMLAGYSQNNKP---------------KESLKLFHEM---------- 258
+D + S + G+ Q+N P E+ FHEM
Sbjct: 226 IDSVTTGKQIHASVIKRGF-QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 259 --------------------MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
G VP + S+++AC ++ LN G +H + +G
Sbjct: 285 LISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR-IFRRG 343
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISE-RNLVSWNSMIAGYAANGQAKQAVNVF 357
+ +V LANA++DMYAKCG+I + VF I + RNLVSW SM+ GY ++G +AV +F
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
D+M G +PD I F+ +L+AC H GL+ +G +YF ME YGI P R+ Y+C++DLLGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHG-NVELARLSACNLLSLDPEDSGIYVL 476
G + EAYEL+ MP +P E+ WGA+L AC+ H N ++RL+A ++ L P+ G YV+
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKV 536
L+ I A E KW D RVR +MR G KK G S + V+ + F V+D+ P + +Y V
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSV 583
Query: 537 L 537
L
Sbjct: 584 L 584
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 321 bits (822), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 293/544 (53%), Gaps = 35/544 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRM-LRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
W++M+ G+ K +P A +F RM + V D + + + AC +LS G VH V
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ GF ++L + N L++ YA K A +F + KDV++W+T+ Y + A+
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+FN M+ EPN T++ VL AC+ D+E GR+ HE +K + + + AL+DMY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+KC F E VFS + P K+VVSW A+++
Sbjct: 310 MKC---------FSPEEAYAVFS----------------------RIPRKDVVSWVALIS 338
Query: 241 GYSQNNKPKESLKLFHEMM-GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
G++ N S++ F M+ P+ +V VL +C +L L H +VI+ G
Sbjct: 339 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHS-YVIKYGF 397
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ + +++++Y++CGS+ A++VFN I+ ++ V W S+I GY +G+ +A+ F+
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 360 M-RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M + KP+++TF+++L+ACSH GLI EG F M +Y + P EHY+ ++DLLGR
Sbjct: 458 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRV 517
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G L A E+ MP P G LL ACR+H N E+A A L L+ +G Y+L++
Sbjct: 518 GDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMS 577
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
N+ + +W +V+++R+ ++ +G+KK SL+E+ + F+ DE HP+ E +Y +L
Sbjct: 578 NVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLK 637
Query: 539 EIFL 542
E+ L
Sbjct: 638 ELDL 641
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 217/454 (47%), Gaps = 37/454 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNT+++ + + +F M R + D + ALKAC EL GE +H V+
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 62 K-LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K + S+L V + LI+ Y G + A +FDE D+VTW++M G+ A+
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAV 147
Query: 121 ELFNLM-LRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
E F M + DV P+ VTLI ++SAC+++ + +GR VH + ++ L+L N+LL+
Sbjct: 148 EFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNC 207
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y K + A LF + +DV SW S ++
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISW-------------------------------STVI 236
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
A Y QN E+L +F++MM G P ++ VL AC L G H+ I KG+
Sbjct: 237 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGL 295
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V ++ A++DMY KC S E A VF+ I +++VSW ++I+G+ NG A +++ F
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 360 MRCM-GFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M +PD I V +L +CS G + + + F++ YG + +++L R
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRC 414
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
G L A ++ + ++ W +L+ +HG
Sbjct: 415 GSLGNASKVFNGIALKDT-VVWTSLITGYGIHGK 447
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 191/365 (52%), Gaps = 34/365 (9%)
Query: 88 AREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQ 147
AR++F E + + + W T+ + E + F+ M R + +P+ TL L AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 148 MGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM 207
+ ++ G +H ++K V GS D++ +S+
Sbjct: 73 LREVNYGEMIHGFVKKD----------------VTLGS--------------DLYVGSSL 102
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM-MGAGVVPE 266
+ Y KCG + A R D+ ++V+WS+M++G+ +N P ++++ F M M + V P+
Sbjct: 103 IYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 162
Query: 267 EHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF 326
L++++SAC +LS LG +H FVI +G ++L N++L+ YAK + + A +F
Sbjct: 163 RVTLITLVSACTKLSNSRLGRCVHG-FVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 327 NAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
I+E++++SW+++IA Y NG A +A+ VF+ M G +P+ T + +L AC+ +
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
+G++ + + G++ + + + ++D+ + +EAY + + +P + +W AL++
Sbjct: 282 QGRKT-HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDV-VSWVALISG 339
Query: 447 CRMHG 451
++G
Sbjct: 340 FTLNG 344
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 219 NARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACG 278
+AR+ + +++ W+ +L S+ + +E L F M P+ L L ACG
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 279 QLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWN 338
+L +N G IH + + + + ++++ MY KCG + A +F+ + + ++V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 339 SMIAGYAANGQAKQAVNVFDQM-RCMGFKPDDITFVNLLTACS 380
SM++G+ NG QAV F +M PD +T + L++AC+
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 321 bits (822), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 322/614 (52%), Gaps = 75/614 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W TMI G K ++ F +++ V D L AC L G+ +H +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ G + + + N LI Y G + A ++F+ K++++WTT+ GY + AME
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNM--------------- 166
LF M + ++P+ ++L++C+ + + G +VH K N+
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 167 RCS----------------LNLHNALLDMYVKCGS---LVAARELFDRMETR-------- 199
+C + L NA+++ Y + G+ L A +F M R
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 200 -------------------------------DVFSWTSMVNGYAKCGDLENARRFLDQTP 228
D+F+ +++++ Y+ C L+++R D+
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
K++V W++M AGY Q ++ +E+L LF E+ + P+E ++++A G L+ + LG
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG 348
H ++++G+ + + NA+LDMYAKCGS E A + F++ + R++V WNS+I+ YA +G
Sbjct: 577 FHCQ-LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHG 635
Query: 349 QAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY 408
+ K+A+ + ++M G +P+ ITFV +L+ACSH GL+ +G + F M R +GI+P+ EHY
Sbjct: 636 EGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHY 694
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP 468
CM+ LLGR G L +A ELI MP +P W +LL+ C GNVELA +A + DP
Sbjct: 695 VCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDP 754
Query: 469 EDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHP 528
+DSG + +L+NI A++ W + K+VR M+ +GV K PG S + ++ E FL D+SH
Sbjct: 755 KDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHC 814
Query: 529 QSEEIYKVLDEIFL 542
++ +IY+VLD++ +
Sbjct: 815 KANQIYEVLDDLLV 828
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 218/446 (48%), Gaps = 53/446 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRV----EMDCRSFVFALKACEELSGD-----FE 52
W+TM+ + FL R R E SF+ +AC L G F+
Sbjct: 113 WSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI---QACSGLDGRGRWMVFQ 169
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
+S + K GFD ++ V LI FY G + +AR VFD K VTWTTM G
Sbjct: 170 LQSF---LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL 172
S ++++LF ++ +V P+ L VLSACS + +E G+++H ++ + + +L
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 173 HNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV 232
N L+D YVKCG ++AA +LF+ M +++ SWT+
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTT-------------------------- 320
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
+L+GY QN KE+++LF M G+ P+ +A S+L++C L L G +H
Sbjct: 321 -----LLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA- 374
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG---Q 349
+ I+ + + N+++DMYAKC + A +VF+ + ++V +N+MI GY+ G +
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG-QEYFYTMERNYGIKPKREHY 408
+A+N+F MR +P +TFV+LL A + L S G + + + YG+
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASA--SLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQ 434
S +ID+ LK++ + M ++
Sbjct: 493 SALIDVYSNCYCLKDSRLVFDEMKVK 518
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 179/347 (51%), Gaps = 32/347 (9%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
VH + G + + + N LI+ Y+ G + +AR+VF++ +++V+W+TM
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 116 SELAMELFNLMLRGDVE-PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
E ++ +F R + PNE L + + ACS ++ + L +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS-------------GLDGRGRWMVFQLQS 172
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
L VK G FDR DV+ T +++ Y K G+++ AR D P K+ V+
Sbjct: 173 FL----VKSG--------FDR----DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT 216
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
W+ M++G + + SL+LF+++M VVP+ + L +VLSAC L L G IH H +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH-I 275
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
+ G+ +L N ++D Y KCG + AA ++FN + +N++SW ++++GY N K+A+
Sbjct: 276 LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAM 335
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG-QEYFYTMERNYG 400
+F M G KPD ++LT+C+ + G Q + YT++ N G
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN+M GY + A + FL + R D +F + A L+ G+ HC +
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL 581
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G + + N L+ YA G + A + FD ++ +DVV W ++ YA+ + A+
Sbjct: 582 LKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKAL 641
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
++ M+ +EPN +T + VLSACS G +E G + E M + + + ++ +
Sbjct: 642 QMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL 701
Query: 181 VKCGSLVAARELFDRMETRD-VFSWTSMVNGYAKCGDLENARRFLDQ---TPHKNVVSWS 236
+ G L AREL ++M T+ W S+++G AK G++E A + + K+ S++
Sbjct: 702 GRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFT 761
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPE 266
+ Y+ E+ K+ M GVV E
Sbjct: 762 MLSNIYASKGMWTEAKKVRERMKVEGVVKE 791
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 129/256 (50%), Gaps = 8/256 (3%)
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM 259
D + ++N Y++ G + AR+ ++ P +N+VSWS M++ + + +ESL +F E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 260 GAGV-VPEEHALVSVLSACGQLSCLNLGHWI---HQHFVIEKGMHPSVTLANAILDMYAK 315
P E+ L S + AC L G W+ Q F+++ G V + ++D Y K
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 316 CGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNL 375
G+I+ A VF+A+ E++ V+W +MI+G G++ ++ +F Q+ PD +
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 376 LTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQP 435
L+ACS + G++ + R YG++ + +ID + G + A++L MP +
Sbjct: 256 LSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 436 CEAAWGALLNACRMHG 451
+W LL+ + +
Sbjct: 315 I-ISWTTLLSGYKQNA 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
+I G+ L+N ++++Y++ G + A +VF + ERNLVSW++M++ +G +++
Sbjct: 70 IIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES 129
Query: 354 VNVFDQM-RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKP--KREHY-- 408
+ VF + R P++ + + ACS GL G+ + ++ ++ +K R+ Y
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQ-SFLVKSGFDRDVYVG 186
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
+ +ID + G + A + ++P + W +++ C G
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMG 228
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 321 bits (822), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 283/552 (51%), Gaps = 33/552 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NT+I GY K + FL+M + + +F LKA L G+ +H +
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
GF + V N ++ FY+ + R +FDE D V++ + Y+ + E ++
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
F M + +LS + + ++MGR++H L++ N+L+DMY
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY- 396
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
AKC E A P + VSW+A+++G
Sbjct: 397 ------------------------------AKCEMFEEAELIFKSLPQRTTVSWTALISG 426
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y Q LKLF +M G+ + ++ +VL A + L LG +H F+I G
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA-FIIRSGNLE 485
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+V + ++DMYAKCGSI+ A +VF + +RN VSWN++I+ +A NG + A+ F +M
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G +PD ++ + +LTACSH G + +G EYF M YGI PK++HY+CM+DLLGR G
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP-EDSGIYVLLANI 480
EA +L+ MP +P E W ++LNACR+H N LA +A L S++ D+ YV ++NI
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNI 665
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
A +W V+ V+ MR++G+KK+P +S VEV+ + F D++HP +EI + ++E+
Sbjct: 666 YAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINEL 725
Query: 541 FLSSELEDYDTD 552
E E Y D
Sbjct: 726 TAEIEREGYKPD 737
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 200/459 (43%), Gaps = 38/459 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHR--VEMDCRSFVFALKACEELSGDFEGESVHCV 59
W ++ Y + + + AF F +M R D +F L C + VH
Sbjct: 113 WTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAF 172
Query: 60 VRKLGFDSE--LLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
KLGFD+ L V N L+ Y + L A +F+E KD VT+ T+ GY
Sbjct: 173 AVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYT 232
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
++ LF M + +P++ T VL A + D +G+++H ++ N +L
Sbjct: 233 ESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQIL 292
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
D Y K ++ R LFD M D S+ NVV
Sbjct: 293 DFYSKHDRVLETRMLFDEMPELDFVSY--------------------------NVV---- 322
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
++ YSQ ++ + SL F EM G ++LS LS L +G +H ++
Sbjct: 323 -ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
+ + N+++DMYAKC E A +F ++ +R VSW ++I+GY G + +F
Sbjct: 382 A-DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
+MR + D TF +L A + + G++ + R+ ++ S ++D+ +
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAK 499
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
G +K+A ++ MP + +W AL++A +G+ E A
Sbjct: 500 CGSIKDAVQVFEEMPDRNA-VSWNALISAHADNGDGEAA 537
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 123/228 (53%), Gaps = 5/228 (2%)
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
RRV + K N +++ ++ G + AAR+++D M ++ S +M++G+ K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG--VVPEEHALVS 272
GD+ +AR D P + VV+W+ ++ Y++N+ E+ KLF +M + +P+ +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 273 VLSACGQLSCLNLGHWIHQHFVIEKGM--HPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
+L C N +H F ++ G +P +T++N +L Y + ++ A +F I
Sbjct: 153 LLPGCNDAVPQNAVGQVHA-FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
E++ V++N++I GY +G +++++F +MR G +P D TF +L A
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 172/436 (39%), Gaps = 79/436 (18%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE--------------------- 94
V + K GFD++ N ++ RG + AR+V+DE
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 95 -SSLKD---------VVTWTTMFDGYASRNCSELAMELFNLMLRGD--VEPNEVTLIAVL 142
SS +D VVTWT + YA + + A +LF M R P+ VT +L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCS--LNLHNALLDMYVKCGSLVAARELFDRMETRD 200
C+ +VH K + L + N LL Y + L A LF+ + +D
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 201 VFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
++ +++ GY K G ES+ LF +M
Sbjct: 215 SVTFNTLITGYEKDGLY-------------------------------TESIHLFLKMRQ 243
Query: 261 AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
+G P + VL A L LG +H + G ++ N ILD Y+K +
Sbjct: 244 SGHQPSDFTFSGVLKAVVGLHDFALGQQLHA-LSVTTGFSRDASVGNQILDFYSKHDRVL 302
Query: 321 AAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS 380
+F+ + E + VS+N +I+ Y+ Q + +++ F +M+CMGF + F +L+ +
Sbjct: 303 ETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAA 362
Query: 381 HGGLISEG-----QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQP 435
+ + G Q T + + + ++D+ + + +EA + S+P Q
Sbjct: 363 NLSSLQMGRQLHCQALLATADSILHVG------NSLVDMYAKCEMFEEAELIFKSLP-QR 415
Query: 436 CEAAWGALLNACRMHG 451
+W AL++ G
Sbjct: 416 TTVSWTALISGYVQKG 431
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 283/514 (55%), Gaps = 33/514 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFL--RMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV 59
WNT++ GY K++ + L RM RH +D + VFA+KAC L G +H +
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K G D + V L+ YA G ++ A++VFDE +++ V W + GY +
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
LF LM + + +TLI ++ AC + ++G+ VH
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH--------------------- 233
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
+ R D+ + + S+++ Y KC L+NAR+ + + +NVV W+ ++
Sbjct: 234 -----GVSIRRSFIDQSD----YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLI 284
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+G+++ + E+ LF +M+ ++P + L ++L +C L L G +H ++I G+
Sbjct: 285 SGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHG-YMIRNGI 343
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ +DMYA+CG+I+ A VF+ + ERN++SW+SMI + NG ++A++ F +
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M+ P+ +TFV+LL+ACSH G + EG + F +M R+YG+ P+ EHY+CM+DLLGR G
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAG 463
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
+ EA I +MP++P +AWGALL+ACR+H V+LA A LLS++PE S +YVLL+N
Sbjct: 464 EIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSN 523
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
I A+ W V VR M KG +K G S EV
Sbjct: 524 IYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 221/489 (45%), Gaps = 61/489 (12%)
Query: 54 ESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL--KDVVTWTTMFDGYA 111
+ VH V GF+ E+++ + L + Y L A F+ ++ +W T+ GY+
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 112 SRN--CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS 169
C + L+N M R + L+ + AC +G +E G +H
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIH----------G 133
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPH 229
L + N L +D + S+V YA+ G +E+A++ D+ P
Sbjct: 134 LAMKNGL---------------------DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPV 172
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
+N V W ++ GY + +K E +LF M G+ + L+ ++ ACG + +G +
Sbjct: 173 RNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCV 232
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQ 349
H + + S L +I+DMY KC ++ A ++F +RN+V W ++I+G+A +
Sbjct: 233 HGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCER 292
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYS 409
A +A ++F QM P+ T +L +CS G + G+ M RN GI+ +++
Sbjct: 293 AVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFT 351
Query: 410 CMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA-----RLSACNLL 464
ID+ R G ++ A + MP + +W +++NA ++G E A ++ + N++
Sbjct: 352 SFIDMYARCGNIQMARTVFDMMPERNV-ISWSSMINAFGINGLFEEALDCFHKMKSQNVV 410
Query: 465 SLDPEDSGIYVLLANICANERKWGDV----KRVRSLMRDKGVKKIPGHSLVEVD------ 514
+S +V L + C++ G+V K+ S+ RD GV H VD
Sbjct: 411 ----PNSVTFVSLLSACSHS---GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAG 463
Query: 515 --GEFKEFL 521
GE K F+
Sbjct: 464 EIGEAKSFI 472
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 186/410 (45%), Gaps = 40/410 (9%)
Query: 1 MWNTMIRGYRK-ARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV 59
+W +++GY K +++P + F F M + +D + + +KAC + G+ VH V
Sbjct: 177 LWGVLMKGYLKYSKDPEV-FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 60 -VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
+R+ D ++ +I Y L +AR++F+ S ++VV WTT+ G+A +
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A +LF MLR + PN+ TL A+L +CS +G + G+ VH M + + + +D
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY +CG++ AR +FD M R+V SW+SM+N + G E
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE-------------------- 395
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
E+L FH+M VVP VS+LSAC + G + + G
Sbjct: 396 -----------EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYG 444
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS-WNSMIAGYAANGQAKQAVNVF 357
+ P ++D+ + G I A + + + + S W ++++ + + A +
Sbjct: 445 VVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIA 504
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREH 407
+++ M + + +V L + G+ E + R GIK R+H
Sbjct: 505 EKLLSMEPEKSSV-YVLLSNIYADAGM----WEMVNCVRRKMGIKGYRKH 549
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
V AL+++LS Q LN +H +I G V L +++ + Y + ++ A
Sbjct: 4 VNRARALLTILS---QAKTLNHTQQVHAKVIIH-GFEDEVVLGSSLTNAYIQSNRLDFAT 59
Query: 324 EVFNAIS--ERNLVSWNSMIAGYAANGQA--KQAVNVFDQMR--CMGFKPDDITFVNLLT 377
FN I +RN SWN++++GY+ + + ++++MR C G D V +
Sbjct: 60 SSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGV--DSFNLVFAIK 117
Query: 378 ACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE 437
AC GL+ G + + G+ ++++ + G ++ A ++ +P++
Sbjct: 118 ACVGLGLLENGI-LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRN-S 175
Query: 438 AAWGALLNA 446
WG L+
Sbjct: 176 VLWGVLMKG 184
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/545 (33%), Positives = 285/545 (52%), Gaps = 12/545 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +I Y K + + RM+ + D ++ LKAC E G VH +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ S L V N LI Y + AR +FD +D V+W + + YAS A E
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF+ M VE + +T + C Q G+ + M +N SL+ ++ +
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRM--RNFPTSLDPVAMIIGL-- 287
Query: 182 KCGSLVAARELFDRMETRDVFSW--------TSMVNGYAKCGDLENARRFLDQTPHKNVV 233
K SL+ A L + + S +++ Y+KC DL +A QT ++
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLC 347
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
+W+++++GY+Q NK +E+ L EM+ AG P L S+L C +++ L G H +
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
+ K L N+++D+YAK G I AA +V + +S+R+ V++ S+I GY G+ A
Sbjct: 408 LRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVA 467
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMID 413
+ +F +M G KPD +T V +L+ACSH L+ EG+ F M+ YGI+P +H+SCM+D
Sbjct: 468 LALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVD 527
Query: 414 LLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI 473
L GR G L +A ++I +MP +P A W LLNAC +HGN ++ + +A LL + PE+ G
Sbjct: 528 LYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGY 587
Query: 474 YVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEI 533
YVL+AN+ A W + VR++MRD GVKK PG + ++ D F F V D S P++
Sbjct: 588 YVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNT 647
Query: 534 YKVLD 538
Y +LD
Sbjct: 648 YPLLD 652
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 206/446 (46%), Gaps = 12/446 (2%)
Query: 41 LKACEELSGDFEGESVH--CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK 98
L AC ++ G VH C+ + + S L+ + L+ FY+ A+ + + S +
Sbjct: 50 LSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPK--LVTFYSAFNLHNEAQSIIENSDIL 107
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
+ W + YA E + + M+ + P+ T +VL AC + D+ GR VH
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVH 167
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLE 218
++E + + SL + NAL+ MY + ++ AR LFDRM RD SW +++N YA G
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 219 NARRFLDQT----PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVL 274
A D+ +V++W+ + G Q +L L M + A++ L
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 275 SACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL 334
AC + + LG IH I + N ++ MY+KC + A VF E +L
Sbjct: 288 KACSLIGAIRLGKEIHG-LAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 335 VSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYT 394
+WNS+I+GYA ++++A ++ +M GF+P+ IT ++L C+ + G+E+
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 395 MERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC--RMHGN 452
+ R K ++ ++D+ ++G + A ++ M + E + +L++ + G
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRD-EVTYTSLIDGYGNQGEGG 465
Query: 453 VELARLSACNLLSLDPEDSGIYVLLA 478
V LA + P+ + +L+
Sbjct: 466 VALALFKEMTRSGIKPDHVTVVAVLS 491
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 82/218 (37%), Gaps = 34/218 (15%)
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
H+ S+LSAC + G +H H I G+ L ++ Y+ A +
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAH-CISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIE 102
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS------- 380
+ + WN +IA YA N ++ + + +M G +PD T+ ++L AC
Sbjct: 103 NSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAF 162
Query: 381 ----HGGL-ISEGQEYFYTME---------RNYGIKPK---------REHYSCMIDLLGR 417
HG + +S + Y RN GI + ++ +I+
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 418 TGLLKEAYELITSMPMQPCEAA---WGALLNACRMHGN 452
G+ EA+EL M E + W + C GN
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 283/521 (54%), Gaps = 38/521 (7%)
Query: 23 LRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADR 82
+R+L +++ + C S + VH + G D + + LI Y+D
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
G + +AR+VFD++ + + W +F E + L+ M R VE + T VL
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 143 SAC----SQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET 198
AC + + G+ +H ++ ++ +
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGY-------------------------------S 214
Query: 199 RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM 258
V+ T++V+ YA+ G ++ A P +NVVSWSAM+A Y++N K E+L+ F EM
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 259 M--GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
M P +VSVL AC L+ L G IH +++ +G+ + + +A++ MY +C
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHG-YILRRGLDSILPVISALVTMYGRC 333
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G +E VF+ + +R++VSWNS+I+ Y +G K+A+ +F++M G P +TFV++L
Sbjct: 334 GKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVL 393
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
ACSH GL+ EG+ F TM R++GIKP+ EHY+CM+DLLGR L EA +++ M +P
Sbjct: 394 GACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPG 453
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
WG+LL +CR+HGNVELA ++ L +L+P+++G YVLLA+I A + W +VKRV+ L
Sbjct: 454 PKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKL 513
Query: 497 MRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
+ +G++K+PG +EV + F+ DE +P E+I+ L
Sbjct: 514 LEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 4/225 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRS--FVFALKACEELSGDFEGESVHCV 59
W+ MI Y K A F M+R + S V L+AC L+ +G+ +H
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ + G DS L V + L+ Y G L+ + VFD +DVV+W ++ Y + A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN-MRCSLNLHNALLD 178
+++F ML P VT ++VL ACS G +E G+R+ E M + + ++ + + ++D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 179 MYVKCGSLVAARELFDRMETRDVFS-WTSMVNGYAKCGDLENARR 222
+ + L A ++ M T W S++ G++E A R
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 318 bits (815), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 270/483 (55%), Gaps = 35/483 (7%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
+V + +F G+ + + ++EL+ MLR V P+ T +++ A S G +
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQ 892
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV---------- 208
++ K + + L+D Y G + AR++FD M RD +WT+MV
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 952
Query: 209 ---------------------NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNK 247
NGY G+LE A +Q P K+++SW+ M+ GYSQN +
Sbjct: 953 SANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR 1012
Query: 248 PKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLAN 307
+E++ +F++MM G++P+E + +V+SAC L L +G +H + ++ G V + +
Sbjct: 1013 YREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM-YTLQNGFVLDVYIGS 1071
Query: 308 AILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKP 367
A++DMY+KCGS+E A VF + ++NL WNS+I G AA+G A++A+ +F +M KP
Sbjct: 1072 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 1131
Query: 368 DDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYEL 427
+ +TFV++ TAC+H GL+ EG+ + +M +Y I EHY M+ L + GL+ EA EL
Sbjct: 1132 NAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALEL 1191
Query: 428 ITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKW 487
I +M +P WGALL+ CR+H N+ +A ++ L+ L+P +SG Y LL ++ A + +W
Sbjct: 1192 IGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW 1251
Query: 488 GDVKRVRSLMRDKGVKKI-PGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSEL 546
DV +R MR+ G++KI PG S + +D F AD+SH S+E+ +LDEI+ L
Sbjct: 1252 RDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGL 1311
Query: 547 EDY 549
Y
Sbjct: 1312 AGY 1314
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 171/406 (42%), Gaps = 96/406 (23%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
++N + +G+ +P + ++RMLR V ++ +KA + F GES+ +
Sbjct: 838 VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA-SSFASRF-GESLQAHI 895
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGY---------- 110
K GF + ++ LI FY+ G ++ AR+VFDE +D + WTTM Y
Sbjct: 896 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSAN 955
Query: 111 -----------ASRNC----------SELAMELFNLMLRGD------------------- 130
A+ NC E A LFN M D
Sbjct: 956 SLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYRE 1015
Query: 131 ------------VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
+ P+EVT+ V+SAC+ +G +E+G+ VH + + + +AL+D
Sbjct: 1016 AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 1075
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY KCGSL A +F + +++F W S++ G A
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAA------------------------- 1110
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
G++Q E+LK+F +M V P VSV +AC ++ G I++ + +
Sbjct: 1111 -HGFAQ-----EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYS 1164
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVF-NAISERNLVSWNSMIAG 343
+ +V ++ +++K G I A E+ N E N V W +++ G
Sbjct: 1165 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 146/354 (41%), Gaps = 77/354 (21%)
Query: 217 LENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSA 276
L+ A + Q NV ++A+ G+ + P SL+L+ M+ V P + S++ A
Sbjct: 821 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA 880
Query: 277 CGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS 336
S G + H + + G V + ++D Y+ G I A +VF+ + ER+ ++
Sbjct: 881 SSFAS--RFGESLQAH-IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIA 937
Query: 337 WNSMIA-------------------------------GYAANGQAKQAVNVFDQMRCM-- 363
W +M++ GY G +QA ++F+QM
Sbjct: 938 WTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDI 997
Query: 364 -----------------------------GFKPDDITFVNLLTACSHGGLISEGQE-YFY 393
G PD++T +++AC+H G++ G+E + Y
Sbjct: 998 ISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1057
Query: 394 TMERNYGIKPKREHY--SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
T++ + + + Y S ++D+ + G L+ A + ++P + W +++ HG
Sbjct: 1058 TLQNGFVL----DVYIGSALVDMYSKCGSLERALLVFFNLPKKNL-FCWNSIIEGLAAHG 1112
Query: 452 NVE--LARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRV-RSLMRDKGV 502
+ L + + S+ P ++ +V + C + + +R+ RS++ D +
Sbjct: 1113 FAQEALKMFAKMEMESVKP-NAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSI 1165
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 272/522 (52%), Gaps = 36/522 (6%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADR--GWLKHAREVFDESSLKDVVTWTTMFDGYASR 113
+H + K G D++ LI A L +AR + D + T+ GY+
Sbjct: 24 IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSES 83
Query: 114 NCSELAMELFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL 172
+ ++ +F M+R G V P+ + V+ A + G ++H K + L +
Sbjct: 84 DEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFV 143
Query: 173 HNALLDMYVKCG---------------SLVA----------------ARELFDRMETRDV 201
L+ MY CG +LVA ARE+FD+M R+
Sbjct: 144 GTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNH 203
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
SW M+ GY K G+LE+A+R + PH++ VSWS M+ G + N ES F E+ A
Sbjct: 204 TSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA 263
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
G+ P E +L VLSAC Q G +H FV + G V++ NA++DMY++CG++
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHG-FVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 322 AAEVFNAISE-RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS 380
A VF + E R +VSW SMIAG A +GQ ++AV +F++M G PD I+F++LL ACS
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 381 HGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAW 440
H GLI EG++YF M+R Y I+P+ EHY CM+DL GR+G L++AY+ I MP+ P W
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 441 GALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDK 500
LL AC HGN+ELA L LDP +SG VLL+N A KW DV +R M +
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 501 GVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFL 542
+KK SLVEV +F ++ E ++ L EI L
Sbjct: 503 RIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIIL 544
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 179/429 (41%), Gaps = 102/429 (23%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFEGESVHCV 59
M+NT++RGY ++ P+ + + F+ M+R V D SF F +KA E G +HC
Sbjct: 72 MFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQ 131
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K G +S L V LI Y G ++ AR+VFDE ++V W + N A
Sbjct: 132 ALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGA 191
Query: 120 MELF-----------NLMLRGDVEPNEV-------------------TLI---------- 139
E+F N+ML G ++ E+ T+I
Sbjct: 192 REIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFN 251
Query: 140 ----------------------AVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
VLSACSQ G E G+ +H +EK ++++NAL+
Sbjct: 252 ESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALI 311
Query: 178 DMYVKCGSLVAARELFDRM-ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
DMY +CG++ AR +F+ M E R + SWTSM+
Sbjct: 312 DMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI---------------------------- 343
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
AG + + + +E+++LF+EM GV P+ + +S+L AC + G
Sbjct: 344 ---AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRV 400
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANG------Q 349
+ P + ++D+Y + G ++ A + + + W +++ +++G Q
Sbjct: 401 YHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQ 460
Query: 350 AKQAVNVFD 358
KQ +N D
Sbjct: 461 VKQRLNELD 469
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 295/499 (59%), Gaps = 10/499 (2%)
Query: 44 CEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYA--DRGWLKHAREVFDESSLKDVV 101
C+ +S E +H ++ LG E + + F A G + +A + + S
Sbjct: 18 CKSMS---ELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNY 74
Query: 102 TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM 161
W + G+++ E ++ ++ MLR + P+ +T ++ + S++ + ++G +H ++
Sbjct: 75 GWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 162 EKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENAR 221
K + L + N L+ MY +AR+LFD M +++ +W S+++ YAK GD+ +AR
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 222 RFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV-PEEHALVSVLSACGQL 280
D+ ++VV+WS+M+ GY + + ++L++F +MM G E +VSV+ AC L
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 281 SCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF--NAISERNLVSWN 338
LN G +H+ ++++ + +V L +++DMYAKCGSI A VF ++ E + + WN
Sbjct: 255 GALNRGKTVHR-YILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 339 SMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERN 398
++I G A++G ++++ +F +MR PD+ITF+ LL ACSHGGL+ E +F +++ +
Sbjct: 314 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES 373
Query: 399 YGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARL 458
G +PK EHY+CM+D+L R GL+K+A++ I+ MP++P + GALLN C HGN+ELA
Sbjct: 374 -GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAET 432
Query: 459 SACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFK 518
L+ L P + G YV LAN+ A +++ + +R M KGVKKI GHS++++DG
Sbjct: 433 VGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRH 492
Query: 519 EFLVADESHPQSEEIYKVL 537
F+ D++H S++IY VL
Sbjct: 493 RFIAHDKTHFHSDKIYAVL 511
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 191/409 (46%), Gaps = 51/409 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +IRG+ +RNP + S +++MLR + D ++ F +K+ LS G S+HC V
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMF-------------- 107
K G + +L + N LIH Y AR++FDE K++VTW ++
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 108 -----------------DGYASRNCSELAMELFNLMLR-GDVEPNEVTLIAVLSACSQMG 149
DGY R A+E+F+ M+R G + NEVT+++V+ AC+ +G
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR--DVFSWTSM 207
+ G+ VH + ++ ++ L +L+DMY KCGS+ A +F R + D W ++
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 208 VNGYAKCGDLENARRFLDQTPHKNV----VSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
+ G A G + + + + + +++ +LA S KE+ F + +G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA 375
Query: 264 VPE-EH--ALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
P+ EH +V VLS G + + F+ E + P+ ++ A+L+ G++E
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAH-------DFISEMPIKPTGSMLGALLNGCINHGNLE 428
Query: 321 AAAEVFNAISE---RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFK 366
A V + E N + + YA N Q + A ++ + M G K
Sbjct: 429 LAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVK 477
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 284/550 (51%), Gaps = 33/550 (6%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N + G+ + R F RML D + L C+ + +H +
Sbjct: 125 NIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAIL 183
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMEL 122
G+D E+ V N LI Y G R VFD S ++V+T T + G E + L
Sbjct: 184 SGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRL 243
Query: 123 FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK 182
F+LM RG V PN VT ++ L+ACS I G+++H + K + L + +AL+DMY
Sbjct: 244 FSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMY-- 301
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
+KCG +E+A + T + VS + +L G
Sbjct: 302 -----------------------------SKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
+QN +E+++ F M+ AGV + + + +VL + L LG +H VI++ +
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHS-LVIKRKFSGN 391
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
+ N +++MY+KCG + + VF + +RN VSWNSMIA +A +G A+ ++++M
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT 451
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
+ KP D+TF++LL ACSH GLI +G+E M+ +GI+P+ EHY+C+ID+LGR GLLK
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLK 511
Query: 423 EAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICA 482
EA I S+P++P W ALL AC HG+ E+ +A L P+ S ++L+ANI +
Sbjct: 512 EAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYS 571
Query: 483 NERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFL 542
+ KW + + M+ GV K G S +E++ + F+V D+ HPQ+E IY VL +F
Sbjct: 572 SRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFP 631
Query: 543 SSELEDYDTD 552
E Y D
Sbjct: 632 VMVDEGYRPD 641
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 182/429 (42%), Gaps = 80/429 (18%)
Query: 69 LLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR 128
L+V N L+ YA G L A ++FDE ++DV++ +F G+ +E L ML
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRML- 148
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVA 188
G + TL VLS C + + +H +++ N L+ Y KCG V+
Sbjct: 149 GSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 189 ARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKP 248
R +FD M R NV++ +A+++G +N
Sbjct: 209 GRGVFDGMSHR-------------------------------NVITLTAVISGLIENELH 237
Query: 249 KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANA 308
++ L+LF M V P +S L+AC + G IH + + G+ + + +A
Sbjct: 238 EDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHA-LLWKYGIESELCIESA 296
Query: 309 ILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
++DMY+KCGSIE A +F + +E + VS ++ G A NG ++A+ F +M G + D
Sbjct: 297 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID 356
Query: 369 ---------------------------------DITFVN--LLTACSHGGLISEGQEYFY 393
TFVN L+ S G +++ Q F
Sbjct: 357 ANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 416
Query: 394 TMERNYGIKPKREHYS--CMIDLLGRTGLLKEA---YELITSMPMQPCEAAWGALLNACR 448
M PKR + S MI R G A YE +T++ ++P + + +LL+AC
Sbjct: 417 RM-------PKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACS 469
Query: 449 MHGNVELAR 457
G ++ R
Sbjct: 470 HVGLIDKGR 478
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 128/252 (50%), Gaps = 9/252 (3%)
Query: 184 GSLVAARELFDRMET----RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
S++ E F+ ++ + W S+++ YAKCG L +A + D+ P ++V+S + +
Sbjct: 69 ASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVF 128
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHA-LVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
G+ +N + + L M+G+G +HA L VLS C + IH I G
Sbjct: 129 YGFLRNRETESGFVLLKRMLGSGGF--DHATLTIVLSVCDTPEFCLVTKMIHA-LAILSG 185
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+++ N ++ Y KCG + VF+ +S RN+++ ++I+G N + + +F
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFS 245
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
MR P+ +T+++ L ACS I EGQ+ + + YGI+ + S ++D+ +
Sbjct: 246 LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ-IHALLWKYGIESELCIESALMDMYSKC 304
Query: 419 GLLKEAYELITS 430
G +++A+ + S
Sbjct: 305 GSIEDAWTIFES 316
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 315 bits (806), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 252/459 (54%), Gaps = 40/459 (8%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
G + A +VF E K+VV WT+M +GY L N
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGY-----------LLN------------------ 72
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVF 202
D+ RR + +++ + L N ++ Y++ G+++ AR LFD+M RDV
Sbjct: 73 ------KDLVSARRYFDLSPERD----IVLWNTMISGYIEMGNMLEARSLFDQMPCRDVM 122
Query: 203 SWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
SW +++ GYA GD+E R D P +NV SW+ ++ GY+QN + E L F M+ G
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 182
Query: 263 -VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
VVP + + VLSAC +L + G W+H++ V + NA++DMY KCG+IE
Sbjct: 183 SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEI 242
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
A EVF I R+L+SWN+MI G AA+G +A+N+F +M+ G PD +TFV +L AC H
Sbjct: 243 AMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKH 302
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWG 441
GL+ +G YF +M ++ I P+ EH C++DLL R G L +A E I MP++ W
Sbjct: 303 MGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWA 362
Query: 442 ALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKG 501
LL A +++ V++ ++ L+ L+P + +V+L+NI + ++ D R++ MRD G
Sbjct: 363 TLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTG 422
Query: 502 VKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
KK G S +E D +F + E HP++EE+ ++L E+
Sbjct: 423 FKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 65/315 (20%)
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS---------- 112
L + ++++ N +I Y + G + AR +FD+ +DV++W T+ +GYA+
Sbjct: 84 LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERV 143
Query: 113 ------RN----------------CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGD 150
RN SE+ ++ G V PN+ T+ VLSAC+++G
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 151 IEMGRRVHENMEKKNM-RCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
+ G+ VH+ E + +N+ NAL+DMY KCG++ A E+F ++ RD+ SW +M+N
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
G A G E+L LFHEM +G+ P++
Sbjct: 264 GLAAHG-------------------------------HGTEALNLFHEMKNSGISPDKVT 292
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
V VL AC + + G + + P + ++D+ ++ G + A E N +
Sbjct: 293 FVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKM 352
Query: 330 SER-NLVSWNSMIAG 343
+ + V W +++
Sbjct: 353 PVKADAVIWATLLGA 367
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRH-RVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN +I+GY + + F RM+ V + + L AC +L G+ VH
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 61 RKLGFDS-ELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
LG++ ++ V+N LI Y G ++ A EVF +D+++W TM +G A+ A
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEA 274
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLD 178
+ LF+ M + P++VT + VL AC MG +E G +M ++ + ++D
Sbjct: 275 LNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVD 334
Query: 179 MYVKCGSLVAARELFDRMETR-DVFSWTSMV 208
+ + G L A E ++M + D W +++
Sbjct: 335 LLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/587 (31%), Positives = 307/587 (52%), Gaps = 68/587 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W ++IR + + A + F+ M D F LK+C + GESVH +
Sbjct: 73 WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIV 132
Query: 62 KLGFDSELLVRNGLIHFYA-----------------------DRG-------------WL 85
+LG D +L N L++ YA + G +
Sbjct: 133 RLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI 192
Query: 86 KHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSAC 145
R VF+ KDVV++ T+ GYA E A+ + M D++P+ TL +VL
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 146 SQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWT 205
S+ D+ G+ +H + +K + DV+ +
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGI-------------------------------DSDVYIGS 281
Query: 206 SMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP 265
S+V+ YAK +E++ R + ++ +SW++++AGY QN + E+L+LF +M+ A V P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 266 EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
A SV+ AC L+ L+LG +H +V+ G ++ +A+A++DMY+KCG+I+AA ++
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHG-YVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 326 FNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
F+ ++ + VSW ++I G+A +G +AV++F++M+ G KP+ + FV +LTACSH GL+
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 386 SEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLN 445
E YF +M + YG+ + EHY+ + DLLGR G L+EAY I+ M ++P + W LL+
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Query: 446 ACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKI 505
+C +H N+ELA A + ++D E+ G YVL+ N+ A+ +W ++ ++R MR KG++K
Sbjct: 521 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK 580
Query: 506 PGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
P S +E+ + F+ D SHP ++I + L + E E Y D
Sbjct: 581 PACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVAD 627
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 191/385 (49%), Gaps = 12/385 (3%)
Query: 75 LIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPN 134
+I Y + L A +F V+ W ++ + ++ A+ F M P+
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 135 EVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC---GSLVAARE 191
+VL +C+ M D+ G VH + + M C L NAL++MY K GS ++
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 192 LFDRMETRDVFSWTSMVNGYAKC---GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKP 248
+FD M R S V C +++ RR + P K+VVS++ ++AGY+Q+
Sbjct: 165 VFDEMPQRTSNSGDEDVKA-ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223
Query: 249 KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANA 308
+++L++ EM + P+ L SVL + + G IH +VI KG+ V + ++
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG-YVIRKGIDSDVYIGSS 282
Query: 309 ILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
++DMYAK IE + VF+ + R+ +SWNS++AGY NG+ +A+ +F QM KP
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 369 DITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYEL 427
+ F +++ AC+H + G++ + Y + +G S ++D+ + G +K A ++
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG--SNIFIASALVDMYSKCGNIKAARKI 400
Query: 428 ITSMPMQPCEAAWGALLNACRMHGN 452
M + E +W A++ +HG+
Sbjct: 401 FDRMNVLD-EVSWTAIIMGHALHGH 424
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 298/584 (51%), Gaps = 75/584 (12%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHC-V 59
+W M+R Y + + +++H D F ALKAC EL G+ +HC +
Sbjct: 109 LWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL 168
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V+ FD+ +V GL+ YA G +K A +VF++ +L++VV WT+M GY + E
Sbjct: 169 VKVPSFDN--VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ LFN M +V NE T ++ AC+++ + G+ H + K + S L +LLDM
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 180 -------------------------------YVKCGSLVAARELFDRME----------- 197
Y GS+ A LF +M+
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 198 ----------------------TRDVFSW-----TSMVNGYAKCGDLENARRFLDQTPHK 230
+ V W ++V+ YAKC +A+ + K
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
++V+W+++++G+SQN E+L LFH M V P + S+ SAC L L +G +H
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 291 QHFVIEKGM--HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG 348
+ ++ G SV + A+LD YAKCG ++A +F+ I E+N ++W++MI GY G
Sbjct: 467 A-YSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525
Query: 349 QAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY 408
++ +F++M KP++ TF ++L+AC H G+++EG++YF +M ++Y P +HY
Sbjct: 526 DTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY 585
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP 468
+CM+D+L R G L++A ++I MP+QP +GA L+ C MH +L + +L L P
Sbjct: 586 TCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHP 645
Query: 469 EDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVE 512
+D+ YVL++N+ A++ +W K VR+LM+ +G+ KI GHS +E
Sbjct: 646 DDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 164/329 (49%), Gaps = 36/329 (10%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
H V+ G ++ + L+ Y G+ K AR VFD+ D W M Y S
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
++L++L+++ +++ L AC+++ D++ G+++H + K ++ L L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGL 182
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
LDMY KCG + +A ++F+ + R+V WTSM+
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI---------------------------- 214
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
AGY +N+ +E L LF+ M V+ E+ +++ AC +LS L+ G W H V +
Sbjct: 215 ---AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV-K 270
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
G+ S L ++LDMY KCG I A VFN S +LV W +MI GY NG +A+++
Sbjct: 271 SGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSL 330
Query: 357 FDQMRCMGFKPDDITFVNLLTACSHGGLI 385
F +M+ + KP+ +T ++L+ C GLI
Sbjct: 331 FQKMKGVEIKPNCVTIASVLSGC---GLI 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 273 VLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER 332
+LS C + L H + + G+ +++A ++ +Y G + A VF+ I E
Sbjct: 50 LLSKCTNIDSLRQSHGV----LTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 333 NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYF 392
+ W M+ Y N ++ + V ++D + GF+ DDI F L AC+ + G++
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 393 YTMERNYGIKPKREH--YSCMIDLLGRTGLLKEAYELITSMPMQ 434
+ + P ++ + ++D+ + G +K A+++ + ++
Sbjct: 166 CQLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR 205
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 312/606 (51%), Gaps = 73/606 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W+T++ + A F M+ VE D + + ++ C EL SVH +
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ FD + + N L+ Y+ G L + +F++ + K+ V+WT M Y SE A+
Sbjct: 230 RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 289
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH---------ENMEKKNMR----- 167
F+ M++ +EPN VTL +VLS+C +G I G+ VH N E ++
Sbjct: 290 SFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 168 --------CSLNLH----------NALLDMYVKCGSLVAARELFDRMETR---------- 199
C L N+L+ +Y G ++ A LF +M T+
Sbjct: 350 AECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLA 409
Query: 200 ----------------------------DVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
D F S+++ Y+K G +++A +Q H++
Sbjct: 410 SSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRS 469
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
VV+W++ML G+SQN E++ LF M + + E ++V+ AC + L G W+H
Sbjct: 470 VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH 529
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
+I G+ T A++DMYAKCG + AA VF A+S R++VSW+SMI Y +G+
Sbjct: 530 KLII-SGLKDLFT-DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIG 587
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
A++ F+QM G KP+++ F+N+L+AC H G + EG+ YF M +++G+ P EH++C
Sbjct: 588 SAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACF 646
Query: 412 IDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDS 471
IDLL R+G LKEAY I MP + WG+L+N CR+H +++ + +L + +D+
Sbjct: 647 IDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDT 706
Query: 472 GIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSE 531
G Y LL+NI A E +W + +R+RS M+ +KK+PG+S +E+D + F +E+ Q++
Sbjct: 707 GYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD 766
Query: 532 EIYKVL 537
EIY+ L
Sbjct: 767 EIYRFL 772
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 216/440 (49%), Gaps = 43/440 (9%)
Query: 18 AFSYFLRMLRHRVEMDCRSFVFALKAC----EELSGDFEGESVHCVVRKLGFDSELLVRN 73
A + R++ ++ F L+AC E LS G VH + K G D + ++
Sbjct: 84 AIDLYHRLVSETTQISKFVFPSVLRACAGSREHLS---VGGKVHGRIIKGGVDDDAVIET 140
Query: 74 GLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEP 133
L+ Y G L A +VFD ++D+V W+T+ A+ +F M+ VEP
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP 200
Query: 134 NEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELF 193
+ VT+I+V+ C+++G + + R VH + +K L N+LL MY
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY------------- 247
Query: 194 DRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLK 253
+KCGDL ++ R ++ KN VSW+AM++ Y++ +++L+
Sbjct: 248 ------------------SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 289
Query: 254 LFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSV-TLANAILDM 312
F EM+ +G+ P L SVLS+CG + + G +H F + + + P+ +L+ A++++
Sbjct: 290 SFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG-FAVRRELDPNYESLSLALVEL 348
Query: 313 YAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITF 372
YA+CG + V +S+RN+V+WNS+I+ YA G QA+ +F QM KPD T
Sbjct: 349 YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTL 408
Query: 373 VNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP 432
+ ++AC + GL+ G++ + R + + S +ID+ ++G + A + +
Sbjct: 409 ASSISACENAGLVPLGKQIHGHVIRT-DVSDEFVQNS-LIDMYSKSGSVDSASTVFNQIK 466
Query: 433 MQPCEAAWGALLNACRMHGN 452
+ W ++L +GN
Sbjct: 467 HRSV-VTWNSMLCGFSQNGN 485
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/625 (29%), Positives = 315/625 (50%), Gaps = 79/625 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN ++ ++ N A F M + + V L+ C G EG +H V
Sbjct: 57 WNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVF----------------------------- 92
+LG +S + + N LI Y+ G L+ +R+VF
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 93 --DESSL----KDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACS 146
DE + D+VTW ++ GYAS+ S+ A+ + M ++P+ ++ ++L A +
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 147 QMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTS 206
+ G +++G+ +H + + + + + L+DMY+K G L AR +FD M+ +++ +W S
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 207 MVNG-----------------------------------YAKCGDLENARRFLDQTPHK- 230
+V+G YA G E A + + K
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 231 ---NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
NVVSW+A+ +G S+N + +LK+F +M GV P + ++L G LS L+ G
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAAN 347
+H F + K + +A A++DMY K G +++A E+F I ++L SWN M+ GYA
Sbjct: 417 EVHG-FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMF 475
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREH 407
G+ ++ + F M G +PD ITF ++L+ C + GL+ EG +YF M YGI P EH
Sbjct: 476 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH 535
Query: 408 YSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLD 467
SCM+DLLGR+G L EA++ I +M ++P WGA L++C++H ++ELA ++ L L+
Sbjct: 536 CSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLE 595
Query: 468 PEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESH 527
P +S Y+++ N+ +N +W DV+R+R+LMR+ V+ S +++D F ++H
Sbjct: 596 PHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTH 655
Query: 528 PQSE----EIYKVLDEIFLSSELED 548
P E+YK++ E+ S + D
Sbjct: 656 PDEGDIYFELYKLVSEMKKSGYVPD 680
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 199/417 (47%), Gaps = 42/417 (10%)
Query: 51 FEGESVHCVVRKLGFD-SELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDG 109
F G ++H + K G D S+ V + + FY L A ++FDE +D + W +
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 110 YASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS 169
E A+ELF M + + T++ +L CS GR++H + + + +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP- 228
+++ N+L+ MY + G L +R++F+ M+ R++ SW S+++ Y K G +++A LD+
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 229 ---HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL 285
++V+W+++L+GY+ K+++ + M AG+ P ++ S+L A + L L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMI---- 341
G IH +++ + V + ++DMY K G + A VF+ + +N+V+WNS++
Sbjct: 244 GKAIHG-YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 342 -------------------------------AGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
+GYA G+ ++A++V +M+ G P+ +
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYEL 427
++ + + CS G + F M+ G+ P S ++ +LG LL E+
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKILGCLSLLHSGKEV 418
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 277/472 (58%), Gaps = 14/472 (2%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE 132
N +I YA G + A E+FDE +++V+W +M R + AM LF M R DV
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV- 202
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
V+ A++ ++ G ++ RR+ + M ++N+ NA++ Y + + A +L
Sbjct: 203 ---VSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS----WNAMITGYAQNNRIDEADQL 255
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
F M RD SW +M+ G+ + ++ A D+ P KNV+SW+ M+ GY +N + +E+L
Sbjct: 256 FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEAL 315
Query: 253 KLFHEMMGAGVV-PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH-PSVTLANAIL 310
+F +M+ G V P VS+LSAC L+ L G IHQ +I K +H + + +A+L
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ--LISKSVHQKNEIVTSALL 373
Query: 311 DMYAKCGSIEAAAEVFNA--ISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
+MY+K G + AA ++F+ + +R+L+SWNSMIA YA +G K+A+ +++QMR GFKP
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 369 DITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELI 428
+T++NLL ACSH GL+ +G E+F + R+ + + EHY+C++DL GR G LK+ I
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Query: 429 TSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWG 488
+ + +GA+L+AC +H V +A+ +L +D+G YVL++NI A K
Sbjct: 494 NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKRE 553
Query: 489 DVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
+ +R M++KG+KK PG S V+V + F+V D+SHPQ E + +L ++
Sbjct: 554 EAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 215/490 (43%), Gaps = 108/490 (22%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
G + AR++FD +DVVTWT + GY A ELF+ R D N VT A++
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD---RVDSRKNVVTWTAMV 116
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFD-------- 194
S + + + + + M ++N+ N ++D Y + G + A ELFD
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 195 -----------------------RMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
RM RDV SWT+MV+G AK G ++ ARR D P +N
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
++SW+AM+ GY+QNN+ E+ +LF V+PE + W
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQ------VMPER----------------DFASW--- 267
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
N ++ + + + A +F+ + E+N++SW +MI GY N + +
Sbjct: 268 ---------------NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENE 312
Query: 352 QAVNVFDQM-RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY-S 409
+A+NVF +M R KP+ T+V++L+ACS + EGQ+ + ++ + K E S
Sbjct: 313 EALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS--VHQKNEIVTS 370
Query: 410 CMIDLLGRTGLLKEAYELI-TSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP 468
++++ ++G L A ++ + Q +W +++ HG+ + A +
Sbjct: 371 ALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGF 430
Query: 469 EDSGI-YVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESH 527
+ S + Y+ L C++ LVE EF + LV DES
Sbjct: 431 KPSAVTYLNLLFACSHA------------------------GLVEKGMEFFKDLVRDESL 466
Query: 528 PQSEEIYKVL 537
P EE Y L
Sbjct: 467 PLREEHYTCL 476
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 150/331 (45%), Gaps = 61/331 (18%)
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQT-PHKNVVSWSAMLA 240
K G + AR+LFD + RDV +WT ++ GY K GD+ AR D+ KNVV+W+AM++
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVS 117
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
GY ++ + + LF EM PE N+ W
Sbjct: 118 GYLRSKQLSIAEMLFQEM------PER----------------NVVSW------------ 143
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
N ++D YA+ G I+ A E+F+ + ERN+VSWNSM+ G+ +A+N+F++M
Sbjct: 144 ------NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE--HYSCMIDLLGRT 418
+ D +++ ++ + G + E + F M P+R ++ MI +
Sbjct: 198 P----RRDVVSWTAMVDGLAKNGKVDEARRLFDCM-------PERNIISWNAMITGYAQN 246
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI--YVL 476
+ EA +L MP + A+W ++ N E+ + AC L PE + I +
Sbjct: 247 NRIDEADQLFQVMPERDF-ASWNTMITG--FIRNREMNK--ACGLFDRMPEKNVISWTTM 301
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPG 507
+ N+ + ++RD VK G
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRH-RVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
W TMI GY + + A + F +MLR V+ + ++V L AC +L+G EG+ +H ++
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLI 357
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL--KDVVTWTTMFDGYASRNCSEL 118
K +V + L++ Y+ G L AR++FD + +D+++W +M YA +
Sbjct: 358 SKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKE 417
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
A+E++N M + +P+ VT + +L ACS G +E G
Sbjct: 418 AIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
P V ++ K G I A ++F+ + ER++V+W +I GY G ++A +FD+
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR 102
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM-ERNYGIKPKREHYSCMIDLLGRT 418
+ + + +T+ +++ +S + F M ERN ++ MID ++
Sbjct: 103 VDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV------VSWNTMIDGYAQS 153
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
G + +A EL MP + +W +++ A G ++ A
Sbjct: 154 GRIDKALELFDEMPERNI-VSWNSMVKALVQRGRIDEA 190
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 280/511 (54%), Gaps = 33/511 (6%)
Query: 68 ELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLML 127
E++ + ++H Y G + AR +FD + ++V+TWT M DGY E LF M
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 128 R-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCG-- 184
+ GDV+ N TL + AC G ++H + + + L L N+L+ MY K G
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 185 -------------------SLVA----------ARELFDRMETRDVFSWTSMVNGYAKCG 215
SL+ A ELF++M +D+ SWT M+ G++ G
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKG 386
Query: 216 DLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLS 275
++ P K+ ++W+AM++ + N +E+L FH+M+ V P + SVLS
Sbjct: 387 EISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 276 ACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLV 335
A L+ L G IH V++ + +++ N+++ MY KCG+ A ++F+ ISE N+V
Sbjct: 447 ATASLADLIEGLQIHGR-VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM 395
S+N+MI+GY+ NG K+A+ +F + G +P+ +TF+ LL+AC H G + G +YF +M
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Query: 396 ERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVEL 455
+ +Y I+P +HY+CM+DLLGR+GLL +A LI++MP +P WG+LL+A + H V+L
Sbjct: 566 KSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Query: 456 ARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDG 515
A L+A L+ L+P+ + YV+L+ + + K D R+ ++ + K +KK PG S + + G
Sbjct: 626 AELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Query: 516 EFKEFLVADESHPQSEEIYKVLDEIFLSSEL 546
E FL DES EEI L I EL
Sbjct: 686 EVHNFLAGDESQLNLEEIGFTLKMIRKEMEL 716
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 164/356 (46%), Gaps = 24/356 (6%)
Query: 74 GLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS-ELAMELFNLMLRGDV- 131
+I YA+ G + A +VFDE ++ ++ M C A ELF D+
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELF-----CDIP 140
Query: 132 EPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARE 191
E N V+ +++ + G + ++ K R S+ N LL Y++ G A
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEAEFLYAETPVK-FRDSV-ASNVLLSGYLRAGKWNEAVR 198
Query: 192 LFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKES 251
+F M ++V S +SMV+GY K G + +AR D+ +NV++W+AM+ GY + ++
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 252 LKLFHEMMGAGVVP-EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAIL 310
LF M G V + L + AC G IH V + + L N+++
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH-GLVSRMPLEFDLFLGNSLM 317
Query: 311 DMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
MY+K G + A VF + ++ VSWNS+I G Q +A +F++M D +
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMV 373
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREH--YSCMIDLLGRTGLLKEA 424
++ +++ S G IS+ E F G+ P++++ ++ MI G +EA
Sbjct: 374 SWTDMIKGFSGKGEISKCVELF-------GMMPEKDNITWTAMISAFVSNGYYEEA 422
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 152/391 (38%), Gaps = 94/391 (24%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRH-RVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
W MI GY KA F FLRM + V+++ + KAC + EG +H +V
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
++ + +L + N L+ Y+ G++ A+ VF KD V+W ++ G R A
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 121 ELFNLMLRGDV---------------------------EPNEVTLIAVLS---------- 143
ELF M D+ E + +T A++S
Sbjct: 362 ELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEE 421
Query: 144 -------------------------ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A + + D+ G ++H + K N+ L++ N+L+
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY KCG+ A ++F + ++ S+ +M+
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMI------------------------------ 511
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+GYS N K++LKLF + +G P +++LSAC + ++LG +
Sbjct: 512 -SGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYN 570
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+ P ++D+ + G ++ A+ + + +
Sbjct: 571 IEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 21/268 (7%)
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
N+ + + + G+L A +F +M R + SW +M++ YA+ G + A + D+ P +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 234 SWSAMLAGYSQNN-KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
S++AM+ +N ++ +LF + +PE++A+ G + G +
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCD------IPEKNAVSYATMITG---FVRAGRFDEAE 164
Query: 293 FVIEKG---MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQ 349
F+ + SV +N +L Y + G A VF ++ + +VS +SM+ GY G+
Sbjct: 165 FLYAETPVKFRDSVA-SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGR 223
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYS 409
A ++FD+M + + IT+ ++ G +G F M + +K +
Sbjct: 224 IVDARSLFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLA 279
Query: 410 CMIDLLGRTGLLKEAYE---LITSMPMQ 434
M +E + L++ MP++
Sbjct: 280 VMFKACRDFVRYREGSQIHGLVSRMPLE 307
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 186/546 (34%), Positives = 295/546 (54%), Gaps = 33/546 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++I+GY + A +F M+ + D S + A LS G +H V
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 413
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G+DS L V N LI Y+ + F KD+++WTT+ GYA +C A+E
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF + + +E +E+ L ++L A S + + + + +H C + L LLD +
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH---------CHI-LRKGLLDTVI 523
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
+ +V+ Y KC ++ A R + K+VVSW++M++
Sbjct: 524 Q----------------------NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
+ N E+++LF M+ G+ + AL+ +LSA LS LN G IH +++ KG
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC-YLLRKGFCL 620
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
++A A++DMYA CG +++A VF+ I + L+ + SMI Y +G K AV +FD+MR
Sbjct: 621 EGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR 680
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
PD I+F+ LL ACSH GL+ EG+ + ME Y ++P EHY C++D+LGR +
Sbjct: 681 HENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 740
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
EA+E + M +P W ALL ACR H E+ ++A LL L+P++ G VL++N+
Sbjct: 741 VEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVF 800
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIF 541
A + +W DV++VR+ M+ G++K PG S +E+DG+ +F D+SHP+S+EIY+ L E+
Sbjct: 801 AEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVT 860
Query: 542 LSSELE 547
E E
Sbjct: 861 RKLERE 866
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 183/381 (48%), Gaps = 34/381 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI Y P A + + M V + SF LKAC +L G +H ++
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK-DVVTWTTMFDGYASRNCSELAM 120
KLG+ S + N L+ YA L AR +FD K D V W ++ Y++ S +
Sbjct: 210 KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETL 269
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS-LNLHNALLDM 179
ELF M PN T+++ L+AC ++G+ +H ++ K + S L + NAL+ M
Sbjct: 270 ELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAM 329
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y +CG + A + +M DV +W S++ GY
Sbjct: 330 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYV--------------------------- 362
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
QN KE+L+ F +M+ AG +E ++ S+++A G+LS L G +H +VI+ G
Sbjct: 363 ----QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA-YVIKHGW 417
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
++ + N ++DMY+KC F + +++L+SW ++IAGYA N +A+ +F
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 360 MRCMGFKPDDITFVNLLTACS 380
+ + D++ ++L A S
Sbjct: 478 VAKKRMEIDEMILGSILRASS 498
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 229/499 (45%), Gaps = 57/499 (11%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHC-V 59
+WN+++ Y + F M + + V AL AC+ S G+ +H V
Sbjct: 251 LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 310
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
++ SEL V N LI Y G + A + + + DVVTW ++ GY + A
Sbjct: 311 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 370
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+E F+ M+ + +EV++ ++++A ++ ++ G +H + K +L + N L+DM
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDM 430
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y KC F RM +D+ SWT+++
Sbjct: 431 YSKCNLTCYMGRAFLRMHDKDLISWTTVI------------------------------- 459
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
AGY+QN+ E+L+LF ++ + +E L S+L A L + + IH H ++ KG+
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH-ILRKGL 518
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+V + N ++D+Y KC ++ A VF +I +++VSW SMI+ A NG +AV +F +
Sbjct: 519 LDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPK-----REHYSCMID 413
M G D + + +L+A + +++G+E + Y + + + ++ + Y+C D
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 414 L---------LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE------LARL 458
L + R GLL+ +I + M C A L + R H NV LA L
Sbjct: 638 LQSAKAVFDRIERKGLLQYT-SMINAYGMHGCGKAAVELFDKMR-HENVSPDHISFLALL 695
Query: 459 SACNLLSLDPEDSGIYVLL 477
AC+ L E G ++
Sbjct: 696 YACSHAGLLDEGRGFLKIM 714
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 156/346 (45%), Gaps = 35/346 (10%)
Query: 36 SFVFALKACEELSGDFEGESVHCVVRKLGFDSEL-LVRNGLIHFYADRGWLKHAREVFDE 94
+F + L+ C + +G +H + K EL + L+ Y G L A +VFDE
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 95 SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
+ W TM Y S A+ L+ M V + A+L AC+++ DI G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
+H + K + + NAL+ MY AK
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMY-------------------------------AKN 230
Query: 215 GDLENARRFLDQTPHK-NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSV 273
DL ARR D K + V W+++L+ YS + K E+L+LF EM G P + +VS
Sbjct: 231 DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSA 290
Query: 274 LSACGQLSCLNLGHWIHQHFVIEKGMHPS-VTLANAILDMYAKCGSIEAAAEVFNAISER 332
L+AC S LG IH V++ H S + + NA++ MY +CG + A + ++
Sbjct: 291 LTACDGFSYAKLGKEIHAS-VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA 349
Query: 333 NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
++V+WNS+I GY N K+A+ F M G K D+++ +++ A
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 311 bits (797), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 287/517 (55%), Gaps = 33/517 (6%)
Query: 27 RHRVEMDCRSFVF-ALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWL 85
R+ E R+ V L+ C E ++ H + ++ + ++ + N LI+ Y+ G++
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 86 KHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSAC 145
+ AR+VFD + +V+W TM Y A+++F M + +E T+ +VLSAC
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 146 SQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWT 205
D +++H K + +L + ALLD+Y
Sbjct: 173 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLY------------------------- 207
Query: 206 SMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP 265
AKCG +++A + + K+ V+WS+M+AGY QN +E+L L+ +
Sbjct: 208 ------AKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 266 EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
+ L SV+ AC L+ L G +H + + G +V +A++ +DMYAKCGS+ + +
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHA-VICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 326 FNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
F+ + E+NL WN++I+G+A + + K+ + +F++M+ G P+++TF +LL+ C H GL+
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 386 SEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLN 445
EG+ +F M YG+ P HYSCM+D+LGR GLL EAYELI S+P P + WG+LL
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 446 ACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKI 505
+CR++ N+ELA ++A L L+PE++G +VLL+NI A ++W ++ + R L+RD VKK+
Sbjct: 441 SCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKV 500
Query: 506 PGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFL 542
G S +++ + F V + HP+ EI LD + +
Sbjct: 501 RGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVI 537
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 32/343 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI Y + R + A FL M + + L AC E + +HC+
Sbjct: 130 WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSV 189
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K D L V L+ YA G +K A +VF+ K VTW++M GY E A+
Sbjct: 190 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 249
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
L+ R +E N+ TL +V+ ACS + + G+++H + K ++ + ++ +DMY
Sbjct: 250 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 309
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KCGSL + +F ++ +++ W ++++G+AK
Sbjct: 310 KCGSLRESYIIFSEVQEKNLELWNTIISGFAK---------------------------- 341
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
+ +PKE + LF +M G+ P E S+LS CG + G + G+ P
Sbjct: 342 ---HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS-WNSMIAG 343
+V + ++D+ + G + A E+ +I S W S++A
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 289/541 (53%), Gaps = 50/541 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W +++GY ++A S F +M E + S+ L + G + C +
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQ-DGRIDDA---CKLY 164
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
++ D + + R +IH G + ARE+FDE S + V+TWTTM GY N + A +
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARK 224
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F++M E EV+ ++L MG YV
Sbjct: 225 IFDVM----PEKTEVSWTSML----------MG-------------------------YV 245
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
+ G + A ELF+ M + V + +M++G + G++ ARR D +N SW ++
Sbjct: 246 QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKI 305
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
+ +N E+L LF M GV P L+S+LS C L+ L+ G +H V
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV-RCQFDV 364
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
V +A+ ++ MY KCG + + +F+ ++++ WNS+I+GYA++G ++A+ VF +M
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 362 CMG-FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
G KP+++TFV L+ACS+ G++ EG + + +ME +G+KP HY+CM+D+LGR G
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGR 484
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
EA E+I SM ++P A WG+LL ACR H +++A A L+ ++PE+SG Y+LL+N+
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNM 544
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVAD-ESHPQSEEIYKVLDE 539
A++ +W DV +R LM+ + V+K PG S EV+ + F SHP+ E I K+LDE
Sbjct: 545 YASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDE 604
Query: 540 I 540
+
Sbjct: 605 L 605
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 156/312 (50%), Gaps = 27/312 (8%)
Query: 142 LSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDV 201
++ S++G I R++ ++ + K S++ N+++ Y AR+LFD M R++
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSK----SISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
SW +V+GY K G+++ AR+ D P +NVVSW+A++ GY N K + LF +M
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM--- 136
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
PE++ + + G L + + +I + + T +++ K G ++
Sbjct: 137 ---PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIART---SMIHGLCKEGRVDE 190
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
A E+F+ +SER++++W +M+ GY N + A +FD M + ++++ ++L
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQ 246
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSC--MIDLLGRTGLLKEAYELITSMPMQPCEAA 439
G I + +E F M P + +C MI LG+ G + +A + SM + +A+
Sbjct: 247 NGRIEDAEELFEVM-------PVKPVIACNAMISGLGQKGEIAKARRVFDSMK-ERNDAS 298
Query: 440 WGALLNACRMHG 451
W ++ +G
Sbjct: 299 WQTVIKIHERNG 310
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 191/439 (43%), Gaps = 86/439 (19%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
G + AR++FD K + +W +M GY + A +LF+ M + N ++ ++
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----PDRNIISWNGLV 86
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVF 202
S + G+I+ R+V + M ++N+ AL+ YV G + A LF +M ++
Sbjct: 87 SGYMKNGEIDEARKVFDLMPERNVVS----WTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 203 SW-------------------------------TSMVNGYAKCGDLENARRFLDQTPHKN 231
SW TSM++G K G ++ AR D+ ++
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPE--EHALVSVLSACGQLSCLNLGHWI 289
V++W+ M+ GY QNN+ ++ K+F V+PE E + S+L Q + +
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFD------VMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQ 349
+ ++ V NA++ + G I A VF+++ ERN SW ++I + NG
Sbjct: 257 FEVMPVK-----PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE--------------YFYTM 395
+A+++F M+ G +P T +++L+ C+ + G++ Y ++
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 396 ERNYGIK--------------PKRE--HYSCMIDLLGRTGLLKEAYELITSMPM----QP 435
IK P ++ ++ +I GL +EA ++ MP+ +P
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 436 CEAAWGALLNACRMHGNVE 454
E + A L+AC G VE
Sbjct: 432 NEVTFVATLSACSYAGMVE 450
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 306 ANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGF 365
AN + ++ G I A ++F++ +++ SWNSM+AGY AN + A +FD+M
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----- 74
Query: 366 KPDD--ITFVNLLTACSHGGLISEGQEYFYTM-ERNYGIKPKREHYSCMIDLLGRTGLLK 422
PD I++ L++ G I E ++ F M ERN ++ ++ G +
Sbjct: 75 -PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV------VSWTALVKGYVHNGKVD 127
Query: 423 EAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI 473
A L MP + + +W +L G ++ AC L + P+ I
Sbjct: 128 VAESLFWKMP-EKNKVSWTVMLIGFLQDGRID----DACKLYEMIPDKDNI 173
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 270/490 (55%), Gaps = 34/490 (6%)
Query: 54 ESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASR 113
+ +H +V + GF + + L+ G + +AR+VFDE + W T+F GY
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 114 NCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLH 173
++ L+ M V P+E T V+ A SQ+GD C LH
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFS---------------CGFALH 132
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
++ C +VA T +V Y K G+L +A + K++V
Sbjct: 133 AHVVKYGFGCLGIVA----------------TELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
+W+A LA Q +L+ F++M V + +VS+LSACGQL L +G I+
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
E+ + ++ + NA LDM+ KCG+ EAA +F + +RN+VSW++MI GYA NG +++A
Sbjct: 237 RKEE-IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREA 295
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM--ERNYGIKPKREHYSCM 411
+ +F M+ G +P+ +TF+ +L+ACSH GL++EG+ YF M + ++P++EHY+CM
Sbjct: 296 LTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACM 355
Query: 412 IDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDS 471
+DLLGR+GLL+EAYE I MP++P WGALL AC +H ++ L + A L+ P+
Sbjct: 356 VDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIG 415
Query: 472 GIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSE 531
+VLL+NI A KW V +VRS MR G KK+ +S VE +G+ F D+SHPQS+
Sbjct: 416 SYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSK 475
Query: 532 EIYKVLDEIF 541
IY+ LDEI
Sbjct: 476 AIYEKLDEIL 485
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 166/351 (47%), Gaps = 36/351 (10%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCV 59
+WNT+ +GY + + P + + +M V D ++ F +KA +L GDF G ++H
Sbjct: 76 LWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL-GDFSCGFALHAH 134
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V K GF +V L+ Y G L A +F+ +KD+V W S +A
Sbjct: 135 VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+E FN M V+ + T++++LSAC Q+G +E+G +++ K+ + C++ + NA LDM
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDM 254
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
++KCG+ AAR LF+ M+ R+V SW++M+ GYA GD
Sbjct: 255 HLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD----------------------- 291
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI--EK 297
+E+L LF M G+ P + VLSAC +N G V +K
Sbjct: 292 --------SREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDK 343
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAAN 347
+ P ++D+ + G +E A E + E + W +++ A +
Sbjct: 344 NLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 271/516 (52%), Gaps = 36/516 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI GY + N A F M+ V++D + V L C L G +VH +V
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE 245
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ ++ V+N L++ Y G + AR VFD +DV+TWT M +GY E A+E
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE 305
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
L LM V PN VT+ +++S C + G+ +H
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH----------------------- 342
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
++++ D+ TS+++ YAKC ++ R + WSA++AG
Sbjct: 343 ---GWAVRQQVYS-----DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
QN ++L LF M V P L S+L A L+ L IH ++ + G
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC-YLTKTGFMS 453
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVF 357
S+ A ++ +Y+KCG++E+A ++FN I E+ ++V W ++I+GY +G A+ VF
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVF 513
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
+M G P++ITF + L ACSH GL+ EG F M +Y + HY+C++DLLGR
Sbjct: 514 MEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGR 573
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLL 477
G L EAY LIT++P +P WGALL AC H NV+L ++A L L+PE++G YVLL
Sbjct: 574 AGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLL 633
Query: 478 ANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
ANI A +W D+++VRS+M + G++K PGHS +E+
Sbjct: 634 ANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 226/456 (49%), Gaps = 38/456 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEM--DCRSFVFALKACEELSGDFEGESVHCV 59
+N +IR Y + + A S F+RM+ V+ D ++ F KA EL G VH
Sbjct: 83 YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGR 142
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ + F + V+N L+ Y + G ++ AR+VFD +DV++W TM GY A
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDA 202
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ +F+ M+ V+ + T++++L C + D+EMGR VH+ +E+K + + + NAL++M
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y+KCG + AR +FDRME RDV +WT M+NGY + GD+ENA
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA------------------- 303
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
L+L M GV P + S++S CG +N G +H + + + +
Sbjct: 304 ------------LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG-WAVRQQV 350
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ + + +++ MYAKC ++ VF+ S+ + W+++IAG N A+ +F +
Sbjct: 351 YSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
MR +P+ T +LL A + + + + + G + + ++ + + G
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCG 469
Query: 420 LLKEAYELITSMPMQPCE---AAWGALLNACRMHGN 452
L+ A+++ + + WGAL++ MHG+
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 152/313 (48%), Gaps = 34/313 (10%)
Query: 79 YADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE--PNEV 136
YA G + +AR++F+E ++++ + Y A+ +F M+ V+ P+
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 137 TLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM 196
T V A ++ +++G VH + + + NALL MY+ G + AR
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR------ 172
Query: 197 ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFH 256
DVF D +++V+SW+ M++GY +N ++L +F
Sbjct: 173 ---DVF----------------------DVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
M+ V + +VS+L CG L L +G +H+ V EK + + + NA+++MY KC
Sbjct: 208 WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLKC 266
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G ++ A VF+ + R++++W MI GY +G + A+ + M+ G +P+ +T +L+
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326
Query: 377 TACSHGGLISEGQ 389
+ C +++G+
Sbjct: 327 SVCGDALKVNDGK 339
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 156/335 (46%), Gaps = 13/335 (3%)
Query: 165 NMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS---WTSMVNGYAKCGDLENAR 221
N S+ + +LL+ + S+ + L + T S +++ YA CG + AR
Sbjct: 10 NALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYAR 69
Query: 222 RFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV--VPEEHALVSVLSACGQ 279
+ ++ P +++S++ ++ Y + +++ +F M+ GV VP+ + V A G+
Sbjct: 70 KLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129
Query: 280 LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNS 339
L + LG +H ++ + NA+L MY G +E A +VF+ + R+++SWN+
Sbjct: 130 LKSMKLGLVVHGR-ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNT 188
Query: 340 MIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNY 399
MI+GY NG A+ +FD M D T V++L C H + G+ +E
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248
Query: 400 GIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLS 459
+ K E + ++++ + G + EA + M + W ++N G+VE A L
Sbjct: 249 -LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDV-ITWTCMINGYTEDGDVENA-LE 305
Query: 460 ACNLLSLD---PEDSGIYVLLANICANERKWGDVK 491
C L+ + P I L++ +C + K D K
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVS-VCGDALKVNDGK 339
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 297/539 (55%), Gaps = 19/539 (3%)
Query: 24 RMLRHRVEMDCR-------SFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLI 76
++LR V++ R ++ ++ C + EG+ VH +R GF +++ N L+
Sbjct: 68 KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 77 HFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEV 136
YA G L AR+VFDE +D+ +W M +GYA E A +LF+ M E +
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSY 183
Query: 137 TLIAVLSACSQMGDIEMGRRVHENMEK-KNMR-----CSLNLHNALLDMYVKCGSLVAAR 190
+ A+++ + E ++ M++ N R S+ + A ++ G +
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 191 ELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKE 250
+ +++ +V W+S+++ Y KCG ++ AR D+ K+VVSW++M+ Y ++++ +E
Sbjct: 244 IVRAGLDSDEVL-WSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 251 SLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAIL 310
LF E++G+ P E+ VL+AC L+ LG +H ++ G P +++++
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG-YMTRVGFDPYSFASSSLV 361
Query: 311 DMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
DMY KCG+IE+A V + + +LVSW S+I G A NGQ +A+ FD + G KPD +
Sbjct: 362 DMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHV 421
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITS 430
TFVN+L+AC+H GL+ +G E+FY++ + + +HY+C++DLL R+G ++ +I+
Sbjct: 422 TFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISE 481
Query: 431 MPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDV 490
MPM+P + W ++L C +GN++LA +A L ++PE+ YV +ANI A KW +
Sbjct: 482 MPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEE 541
Query: 491 KRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDY 549
++R M++ GV K PG S E+ + F+ AD SHP +I + L E+ + E Y
Sbjct: 542 GKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGY 600
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 173/403 (42%), Gaps = 75/403 (18%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE----GESVH 57
W M+ GY K P A L L RV + R +F + + + G+ +H
Sbjct: 185 WTAMVTGYVKKDQPEEAL--VLYSLMQRVP-NSRPNIFTVSIAVAAAAAVKCIRRGKEIH 241
Query: 58 CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
+ + G DS+ ++ + L+ Y G + AR +FD+ KDVV+WT+M D Y +
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
LF+ ++ PNE T VL+AC+ + E+G++VH M + ++L+
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLV 361
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
DMY KCG++ +A+ + D D+ SWTS++ G A
Sbjct: 362 DMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCA------------------------- 396
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLG----------- 286
QN +P E+LK F ++ +G P+ V+VLSAC + G
Sbjct: 397 ------QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH 450
Query: 287 -------HWI--------------HQHFVIEKGMHPSVTLANAILDMYAKCGSI----EA 321
H+ + + E M PS L ++L + G+I EA
Sbjct: 451 RLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEA 510
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG 364
A E+F I N V++ +M YAA G+ ++ + +M+ +G
Sbjct: 511 AQELFK-IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 5/268 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W +MI Y K+ FS F ++ + +F L AC +L+ + G+ VH +
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
++GFD + L+ Y G ++ A+ V D D+V+WT++ G A + A++
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALK 406
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLDMY 180
F+L+L+ +P+ VT + VLSAC+ G +E G ++ EK + + + + L+D+
Sbjct: 407 YFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLL 466
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDL---ENARRFLDQTPHKNVVSWS 236
+ G + + M + F W S++ G + G++ E A + L + +N V++
Sbjct: 467 ARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYV 526
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVV 264
M Y+ K +E K+ M GV
Sbjct: 527 TMANIYAAAGKWEEEGKMRKRMQEIGVT 554
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 260/437 (59%), Gaps = 2/437 (0%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE 132
+ LI YA+ G + +R +FD S + V+ W +M GY + N A+ LFN M R +
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETR 315
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
+ TL AV++AC +G +E G+++H + K + + + + LLDMY KCGS + A +L
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
F +E+ D SM+ Y CG +++A+R ++ +K+++SW++M G+SQN E+L
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 253 KLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDM 312
+ FH+M + +E +L SV+SAC +S L LG + I G+ ++++++D+
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI-VGLDSDQVVSSSLIDL 494
Query: 313 YAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITF 372
Y KCG +E VF+ + + + V WNSMI+GYA NGQ +A+++F +M G +P ITF
Sbjct: 495 YCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITF 554
Query: 373 VNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP 432
+ +LTAC++ GL+ EG++ F +M+ ++G P +EH+SCM+DLL R G ++EA L+ MP
Sbjct: 555 MVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
Query: 433 MQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKR 492
+ W ++L C +G + + +A ++ L+PE+S YV L+ I A W
Sbjct: 615 FDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSAL 674
Query: 493 VRSLMRDKGVKKIPGHS 509
VR LMR+ V K PG S
Sbjct: 675 VRKLMRENNVTKNPGSS 691
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 205/410 (50%), Gaps = 38/410 (9%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE 132
N ++ +A G L AR +F+ KDVVT ++ GY +E A+ LF + +
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFS 184
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
+ +TL VL AC+++ ++ G+++H + + C ++++L+++Y KCG L A +
Sbjct: 185 ADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYM 244
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
+++ D S +++++GYA CG + +R D+ ++ V+ W++M++GY NN E+L
Sbjct: 245 LEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEAL 304
Query: 253 KLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDM 312
LF+EM + L +V++AC L L G +H H + G+ + +A+ +LDM
Sbjct: 305 VLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCH-ACKFGLIDDIVVASTLLDM 362
Query: 313 YAKCGS-------------------------------IEAAAEVFNAISERNLVSWNSMI 341
Y+KCGS I+ A VF I ++L+SWNSM
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 342 AGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGI 401
G++ NG + + F QM + D+++ ++++AC+ + G++ F G+
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGL 481
Query: 402 KPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
+ S +IDL + G ++ + +M ++ E W ++++ +G
Sbjct: 482 DSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 162/380 (42%), Gaps = 64/380 (16%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN+MI GY A N + +R+ D R+ + AC L G+ +HC
Sbjct: 286 LWNSMISGY-IANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 61 RKLGFDSELLVR-------------------------------NGLIHFYADRGWLKHAR 89
K G +++V N +I Y G + A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 90 EVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
VF+ K +++W +M +G++ C+ +E F+ M + D+ +EV+L +V+SAC+ +
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
+E+G +V + + ++L+D+Y KCG + R +FD M D W SM++
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
GYA N + E++ LF +M AG+ P +
Sbjct: 525 GYA-------------------------------TNGQGFEAIDLFKKMSVAGIRPTQIT 553
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+ VL+AC + G + + ++ G P + ++D+ A+ G +E A + +
Sbjct: 554 FMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Query: 330 S-ERNLVSWNSMIAGYAANG 348
+ + W+S++ G ANG
Sbjct: 614 PFDVDGSMWSSILRGCVANG 633
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 153/353 (43%), Gaps = 67/353 (18%)
Query: 139 IAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL-HNALLDMYVKCGSLVAARELFDRME 197
+ +L +CS + R+ + + KK S+ + N LL MY + G + AR LFD M
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 198 TRDVFSWTSMVNGY-------------------------------AKCGDLENARRFLDQ 226
R+ FSW +M+ GY AK G+L ARR +
Sbjct: 90 DRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNA 149
Query: 227 TPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLG 286
P K+VV+ +++L GY N +E+L+LF E+ + L +VL AC +L L G
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCG 206
Query: 287 HWIHQHFVI------------------------------EKGMHPSVTLANAILDMYAKC 316
IH +I E+ P +A++ YA C
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G + + +F+ S R ++ WNSMI+GY AN +A+ +F++MR + D T ++
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVI 325
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELIT 429
AC G + G++ + +G+ S ++D+ + G EA +L +
Sbjct: 326 NACIGLGFLETGKQ-MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFS 377
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN+M G+ + YF +M + + D S + AC +S GE V
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+G DS+ +V + LI Y G+++H R VFD D V W +M GYA+ A++
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAID 537
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLH-NALLDMY 180
LF M + P ++T + VL+AC+ G +E GR++ E+M+ + H + ++D+
Sbjct: 538 LFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLL 597
Query: 181 VKCGSLVAARELFDRME-TRDVFSWTSMV-----NGYAKCGDLENARRFLDQTPHKNV-- 232
+ G + A L + M D W+S++ NGY G + A + ++ P +V
Sbjct: 598 ARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGK-KAAEKIIELEPENSVAY 656
Query: 233 VSWSAMLA 240
V SA+ A
Sbjct: 657 VQLSAIFA 664
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/549 (32%), Positives = 285/549 (51%), Gaps = 34/549 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELS-GDFEGESVHCVV 60
WN++I G + A F+++LR ++ D + LKA L G + VH
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K+ S+ V LI Y+ +K A +F+ + D+V W M GY + +
Sbjct: 444 IKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTL 502
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+LF LM + ++ TL V C + I G++VH K L + + +LDMY
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY 562
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
VK CGD+ A+ D P + V+W+ M++
Sbjct: 563 VK-------------------------------CGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
G +N + + + +F +M GV+P+E + ++ A L+ L G IH + ++
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN-ALKLNCT 650
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+ +++DMYAKCGSI+ A +F I N+ +WN+M+ G A +G+ K+ + +F QM
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
+ +G KPD +TF+ +L+ACSH GL+SE ++ +M +YGIKP+ EHYSC+ D LGR GL
Sbjct: 711 KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGL 770
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
+K+A LI SM M+ + + LL ACR+ G+ E + A LL L+P DS YVLL+N+
Sbjct: 771 VKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 830
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
A KW ++K R++M+ VKK PG S +EV + F+V D S+ Q+E IY+ + ++
Sbjct: 831 YAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDM 890
Query: 541 FLSSELEDY 549
+ E Y
Sbjct: 891 IRDIKQEGY 899
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 242/567 (42%), Gaps = 67/567 (11%)
Query: 2 WNTMIRGYRKARN---PNIAFSYFL-RMLRHRVEMDCR-SFVFALKACEELSGDFEGESV 56
WN+++ Y ++ NI ++ L R+LR V R + LK C + ES
Sbjct: 108 WNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESF 167
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
H K+G D + V L++ Y G +K + +F+E +DVV W M Y
Sbjct: 168 HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFK 227
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAV----------------------------------L 142
E A++L + + PNE+TL + L
Sbjct: 228 EEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGL 287
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL--------FD 194
S G + +M + ++ C +L VK SL +++ D
Sbjct: 288 SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLD 347
Query: 195 RMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKL 254
M T S++N Y K AR D ++++SW++++AG +QN E++ L
Sbjct: 348 LMLTVS----NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 255 FHEMMGAGVVPEEHALVSVLSACGQLS-CLNLGHWIHQHFVIEKGMHPSVTLANAILDMY 313
F +++ G+ P+++ + SVL A L L+L +H H + + S ++ A++D Y
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF-VSTALIDAY 462
Query: 314 AKCGSIEAAAEVFNAISER---NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
++ ++ A +F ER +LV+WN+M+AGY + + + +F M G + DD
Sbjct: 463 SRNRCMKEAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518
Query: 371 TFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELIT 429
T + C I++G++ + Y ++ Y + S ++D+ + G + A
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFD 576
Query: 430 SMPMQPCEAAWGALLNACRMHGNVELA--RLSACNLLSLDPEDSGIYVLL-ANICANERK 486
S+P+ P + AW +++ C +G E A S L+ + P++ I L A+ C +
Sbjct: 577 SIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 635
Query: 487 WGDVKRVRSLMRDKGVKKIPGHSLVEV 513
G +L + G SLV++
Sbjct: 636 QGRQIHANALKLNCTNDPFVGTSLVDM 662
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 44/371 (11%)
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYA- 111
G+ H + + E + N LI Y+ G L +AR VFD+ +D+V+W ++ YA
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 112 SRNCS----ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
S C + A LF ++ + V + +TL +L C G + H K +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCG------DLENAR 221
+ AL+++Y+K G + + LF+ M RDV W M+ Y + G DL +A
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 222 RFLDQTPHKNVVSWSAMLAG--------------------------------YSQNNKPK 249
P++ + A ++G Y + +
Sbjct: 238 HSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYS 297
Query: 250 ESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAI 309
LK F +M+ + V ++ + +L+ ++ L LG +H ++ G+ +T++N++
Sbjct: 298 ALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC-MALKLGLDLMLTVSNSL 356
Query: 310 LDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDD 369
++MY K A VF+ +SER+L+SWNS+IAG A NG +AV +F Q+ G KPD
Sbjct: 357 INMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 370 ITFVNLLTACS 380
T ++L A S
Sbjct: 417 YTMTSVLKAAS 427
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
L NA+ + G AR + E + F ++++ Y+KCG L ARR D+ P ++
Sbjct: 46 LRNAITSSDLMLGKCTHAR-ILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 232 VVSWSAMLAGYSQNNK-----PKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLG 286
+VSW+++LA Y+Q+++ +++ LF + V L +L CL+ G
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKL-----CLHSG 159
Query: 287 H-WIHQHF---VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIA 342
+ W + F + G+ +A A++++Y K G ++ +F + R++V WN M+
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 343 GYAANGQAKQAVNVFDQMRCMGFKPDDITF 372
Y G ++A+++ G P++IT
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA-----KQAV 354
+P L N ++ MY+KCGS+ A VF+ + +R+LVSWNS++A YA + + +QA
Sbjct: 71 NPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAF 130
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
+F +R +T +L C H G + E F+ G+ ++++
Sbjct: 131 LLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 415 LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA--RLSACNLLSLDPEDSG 472
+ G +KE L MP + W +L A G E A SA + L+P +
Sbjct: 190 YLKFGKVKEGKVLFEEMPYRDV-VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Query: 473 IYVLLANICANERKWGDVK 491
+ LLA I ++ G VK
Sbjct: 249 LR-LLARISGDDSDAGQVK 266
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 297/554 (53%), Gaps = 35/554 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYF-LRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN +I G+ + R+ AF L ++ V MD +F L ++ + VH V
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKV 229
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE-SSLKDVVTWTTMFDGYASRNCSELA 119
KLG E+ + N +I YAD G + A+ VFD KD+++W +M G++ E A
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESA 289
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
ELF M R VE + T +LSACS G+ +H + KK + + NAL+ M
Sbjct: 290 FELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISM 349
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y++ + G +E+A + K+++SW++++
Sbjct: 350 YIQFPT-----------------------------GTMEDALSLFESLKSKDLISWNSII 380
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
G++Q ++++K F + + + +++A ++L +C L+ L LG IH + G
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA-LATKSGF 439
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAANGQAKQAVNVFD 358
+ + ++++ MY+KCG IE+A + F IS + + V+WN+MI GYA +G + ++++F
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFS 499
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
QM K D +TF +LTACSH GLI EG E ME Y I+P+ EHY+ +DLLGR
Sbjct: 500 QMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRA 559
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
GL+ +A ELI SMP+ P L CR G +E+A A +LL ++PED YV L+
Sbjct: 560 GLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLS 619
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
++ ++ +KW + V+ +M+++GVKK+PG S +E+ + K F D S+P ++IY ++
Sbjct: 620 HMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIK 679
Query: 539 EIFLSSELEDYDTD 552
+ L+ E++ D+D
Sbjct: 680 D--LTQEMQWLDSD 691
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 203/454 (44%), Gaps = 37/454 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI GY A+ F M R ++D SF LK + GE VH +V
Sbjct: 69 WNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G++ + V + L+ YA ++ A E F E S + V+W + G+ + A
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188
Query: 122 LFNLM-LRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
L LM ++ V + T +L+ + ++VH + K ++ + + NA++ Y
Sbjct: 189 LLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSY 248
Query: 181 VKCGSLVAARELFDRM-ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
CGS+ A+ +FD + ++D+ SW SM+
Sbjct: 249 ADCGSVSDAKRVFDGLGGSKDLISWNSMI------------------------------- 277
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
AG+S++ + + +LF +M V + + +LSAC G +H VI+KG+
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHG-MVIKKGL 336
Query: 300 HPSVTLANAILDMYAK--CGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
+ NA++ MY + G++E A +F ++ ++L+SWNS+I G+A G ++ AV F
Sbjct: 337 EQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF 396
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
+R K DD F LL +CS + GQ+ + + G S +I + +
Sbjct: 397 SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ-IHALATKSGFVSNEFVISSLIVMYSK 455
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
G+++ A + + + AW A++ HG
Sbjct: 456 CGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 186/561 (33%), Positives = 289/561 (51%), Gaps = 45/561 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI + P A +FL M+ E D + AC EL G+ +H
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 62 KLGFDSELLVRNGLIHFYAD---RGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
+ G + V L+ YA G + R+VFD V++WT + GY +NC+ L
Sbjct: 297 RSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM-KNCN-L 352
Query: 119 AMELFNL----MLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
A E NL + +G VEPN T + AC + D +G++V K+ + + ++ N
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVAN 412
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
+++ M+VK DRME +A+R + KN+VS
Sbjct: 413 SVISMFVKS----------DRME---------------------DAQRAFESLSEKNLVS 441
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
++ L G +N +++ KL E+ + S+LS + + G IH V
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ-V 500
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
++ G+ + + NA++ MY+KCGSI+ A+ VFN + RN++SW SMI G+A +G A + +
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
F+QM G KP+++T+V +L+ACSH GL+SEG +F +M ++ IKPK EHY+CM+DL
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620
Query: 415 LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIY 474
L R GLL +A+E I +MP Q W L ACR+H N EL +L+A +L LDP + Y
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAY 680
Query: 475 VLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIY 534
+ L+NI A KW + +R M+++ + K G S +EV + +F V D +HP + +IY
Sbjct: 681 IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIY 740
Query: 535 KVLDEIFLSSELEDY--DTDI 553
LD + + Y DTD+
Sbjct: 741 DELDRLITEIKRCGYVPDTDL 761
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 212/459 (46%), Gaps = 47/459 (10%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGE---SVHC 58
W+ M+ Y A F+ L + + + ++AC + DF G ++
Sbjct: 134 WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS--NSDFVGVGRVTLGF 191
Query: 59 VVRKLGFDSELLVRNGLIH-FYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
+++ F+S++ V LI F ++A +VFD+ S +VVTWT M
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ F M+ E ++ TL +V SAC+++ ++ +G+++H S + + L+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH----------SWAIRSGLV 301
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC---GDLENARRFLDQTPHKNVVS 234
D V+C S+V+ YAKC G +++ R+ D+ +V+S
Sbjct: 302 D-DVEC----------------------SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 235 WSAMLAGYSQN-NKPKESLKLFHEMMGAG-VVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
W+A++ GY +N N E++ LF EM+ G V P S ACG LS +G +
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
++G+ + ++AN+++ M+ K +E A F ++SE+NLVS+N+ + G N +Q
Sbjct: 399 -AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 353 AVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
A + ++ TF +LL+ ++ G I +G++ ++ G+ + + +I
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ-IHSQVVKLGLSCNQPVCNALI 516
Query: 413 DLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
+ + G + A + M + +W +++ HG
Sbjct: 517 SMYSKCGSIDTASRVFNFMENRNV-ISWTSMITGFAKHG 554
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 178/361 (49%), Gaps = 46/361 (12%)
Query: 32 MDCRSFVFALKACEELSGDFE-GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHARE 90
MD +F LK+C + DF G+ VH + + + + ++ N LI Y+ G A +
Sbjct: 60 MDSVTFSSLLKSCIR-ARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 91 VFDES---SLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQ 147
VF+ +DVV+W+ M Y + A+++F L + PN+ AV+ ACS
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 148 MGDIEMGR-RVHENMEKKNMRCSLNLHNALLDMYVKC-GSLVAARELFDRMETRDVFSWT 205
+ +GR + M+ + + + +L+DM+VK S A ++FD+M +V +WT
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 206 SMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP 265
M+ +C M G+ P+E+++ F +M+ +G
Sbjct: 239 LMI---TRC-----------------------MQMGF-----PREAIRFFLDMVLSGFES 267
Query: 266 EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC---GSIEAA 322
++ L SV SAC +L L+LG +H + I G+ V +++DMYAKC GS++
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHS-WAIRSGLVDDVEC--SLVDMYAKCSADGSVDDC 324
Query: 323 AEVFNAISERNLVSWNSMIAGYAAN-GQAKQAVNVFDQMRCMG-FKPDDITFVNLLTACS 380
+VF+ + + +++SW ++I GY N A +A+N+F +M G +P+ TF + AC
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 381 H 381
+
Sbjct: 385 N 385
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 138/275 (50%), Gaps = 32/275 (11%)
Query: 119 AMELFNLMLRGDVEP-NEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ +LM R + P + VT ++L +C + D +G+ VH + + ++ L+N+L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
+Y K G A ++F+ M RRF ++VVSWSA
Sbjct: 105 SLYSKSGDSAKAEDVFETM------------------------RRF----GKRDVVSWSA 136
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
M+A Y N + +++K+F E + G+VP ++ +V+ AC + +G + F+++
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGR-VTLGFLMKT 195
Query: 298 GMHPS-VTLANAILDMYAKC-GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
G S V + +++DM+ K S E A +VF+ +SE N+V+W MI G ++A+
Sbjct: 196 GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 356 VFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
F M GF+ D T ++ +AC+ +S G++
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 280/554 (50%), Gaps = 34/554 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W ++I G + + + A F M R V + +F A KA L G+ +H +
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G ++ V Y AR++FDE +++ TW + A+E
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
F R D PN +T A L+ACS + +G ++H + + +++ N L+D Y
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY- 254
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KC + ++ + KN VSW +++A
Sbjct: 255 ------------------------------GKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y QN++ +++ L+ V + + SVLSAC ++ L LG IH H ++ +
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH-AVKACVER 343
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM- 360
++ + +A++DMY KCG IE + + F+ + E+NLV+ NS+I GYA GQ A+ +F++M
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 361 -RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
R G P+ +TFV+LL+ACS G + G + F +M YGI+P EHYSC++D+LGR G
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
+++ AYE I MP+QP + WGAL NACRMHG +L L+A NL LDP+DSG +VLL+N
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSN 523
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
A +W + VR ++ G+KK G+S + V + F D SH ++EI L +
Sbjct: 524 TFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAK 583
Query: 540 IFLSSELEDYDTDI 553
+ E Y D+
Sbjct: 584 LRNEMEAAGYKPDL 597
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 170/385 (44%), Gaps = 42/385 (10%)
Query: 53 GESVHC-VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYA 111
G VH +V+ L + N LI+ Y+ + AR V + ++VV+WT++ G A
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 112 SRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLN 171
A+ F M R V PN+ T A + + G+++H
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA------------ 132
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
+ VKCG ++ DVF S + Y K ++AR+ D+ P +N
Sbjct: 133 -------LAVKCGRIL------------DVFVGCSAFDMYCKTRLRDDARKLFDEIPERN 173
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
+ +W+A ++ + +P+E+++ F E P + L+AC LNLG +H
Sbjct: 174 LETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHG 233
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
V+ G V++ N ++D Y KC I ++ +F + +N VSW S++A Y N + +
Sbjct: 234 -LVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDE 292
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY--- 408
+A ++ + R + D ++L+AC+ + G+ + +K E
Sbjct: 293 KASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI-----HAHAVKACVERTIFV 347
Query: 409 -SCMIDLLGRTGLLKEAYELITSMP 432
S ++D+ G+ G ++++ + MP
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMP 372
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 131/277 (47%), Gaps = 3/277 (1%)
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPH 229
L L NA+ ++ G +V AR + F ++N Y+K E+AR L TP
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
+NVVSW+++++G +QN +L F EM GVVP + A L G I
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQ 349
H ++ G V + + DMY K + A ++F+ I ERNL +WN+ I+ +G+
Sbjct: 131 HA-LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYS 409
++A+ F + R + P+ ITF L ACS ++ G + + R+ G +
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS-GFDTDVSVCN 248
Query: 410 CMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
+ID G+ ++ + + T M + +W +L+ A
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNA-VSWCSLVAA 284
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 287/537 (53%), Gaps = 36/537 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+ T+I+GY + + A F M + ++ + + AC L G ++ + +
Sbjct: 141 YTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAI 200
Query: 62 KLGFDSELLVRNGLIHFY-------------------------------ADRGWLKHARE 90
KL + + V L+H Y + G ++ A E
Sbjct: 201 KLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEE 260
Query: 91 VFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGD 150
+FD+ + KD+V+W TM DG +N + A+ + MLR ++P+EV ++ +LSA ++
Sbjct: 261 LFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVG 320
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNG 210
G ++H + K+ C L ++ Y + A + F+ + S +++ G
Sbjct: 321 SSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAG 380
Query: 211 YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV-PEEHA 269
+ K G +E AR DQT K++ SW+AM++GY+Q+ P+ +L LF EM+ + V P+
Sbjct: 381 FVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAIT 440
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA- 328
+VSV SA L L G H + + P+ L AI+DMYAKCGSIE A +F+
Sbjct: 441 MVSVFSAISSLGSLEEGKRAHDYLNFST-IPPNDNLTAAIIDMYAKCGSIETALNIFHQT 499
Query: 329 --ISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
IS + WN++I G A +G AK A++++ ++ + KP+ ITFV +L+AC H GL+
Sbjct: 500 KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVE 559
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
G+ YF +M+ ++GI+P +HY CM+DLLG+ G L+EA E+I MP++ WG LL+A
Sbjct: 560 LGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA 619
Query: 447 CRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVK 503
R HGNVE+A L+A L ++DP G V+L+N+ A+ +W DV VR MR + V+
Sbjct: 620 SRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/491 (29%), Positives = 223/491 (45%), Gaps = 75/491 (15%)
Query: 35 RSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVF-- 92
R+ V AL +C + G +HC V K G DS + N +++ YA L A VF
Sbjct: 42 RALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRD 101
Query: 93 -----------------------DESSLKDV------VTWTTMFDGYASRNCSELAMELF 123
D L DV V++TT+ GYA N AMELF
Sbjct: 102 HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELF 161
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC 183
M + NEVTL V+SACS +G I R + K + + + LL MY C
Sbjct: 162 REMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 184 GSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYS 243
L AR+LFD M R++ +W M+NGY+K G +E A DQ K++VSW M+ G
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCL 281
Query: 244 QNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV--------- 294
+ N+ E+L + EM+ G+ P E +V +LSA + + G +H V
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 341
Query: 295 ---------------------IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERN 333
E + + NA++ + K G +E A EVF+ +++
Sbjct: 342 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKD 401
Query: 334 LVSWNSMIAGYAANGQAKQAVNVFDQM-RCMGFKPDDITFVNLLTACSHGGLISEGQEYF 392
+ SWN+MI+GYA + + A+++F +M KPD IT V++ +A S G + EG+
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 393 YTMERNYGIKPKREHYS-CMIDLLGRTGLLKEAYEL------ITSMPMQPCEAAWGALLN 445
+ N+ P ++ + +ID+ + G ++ A + I+S + P W A++
Sbjct: 462 DYL--NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP----WNAIIC 515
Query: 446 ACRMHGNVELA 456
HG+ +LA
Sbjct: 516 GSATHGHAKLA 526
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 15/294 (5%)
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVA 188
G+ E L++ L +C+ D+ GR++H + K + + + N++L+MY KC L
Sbjct: 35 GESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLAD 94
Query: 189 ARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKP 248
A +F D S+ MV+GY + L +A + D P ++ VS++ ++ GY+QNN+
Sbjct: 95 AESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQW 154
Query: 249 KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW---IHQHFVIEKGMHPSVTL 305
E+++LF EM G++ E L +V+SAC L G W + Q I+ + V +
Sbjct: 155 SEAMELFREMRNLGIMLNEVTLATVISACSHLG----GIWDCRMLQSLAIKLKLEGRVFV 210
Query: 306 ANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGF 365
+ +L MY C ++ A ++F+ + ERNLV+WN M+ GY+ G +QA +FDQ+
Sbjct: 211 STNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT---- 266
Query: 366 KPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
+ D +++ ++ C + E Y+ M R G+KP M+DLL +
Sbjct: 267 EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR-CGMKPSE---VMMVDLLSASA 316
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/622 (30%), Positives = 298/622 (47%), Gaps = 75/622 (12%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN MI G+ + + ++ + V++ SF AL AC + G +HC V
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K+G ++ V L+ Y+ G + A VF K + W M YA + A+
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+LF M + V P+ TL V+S CS +G G+ VH + K+ ++ + + +ALL +Y
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFL-----DQTPHK----- 230
KCG A +F ME +D+ +W S+++G K G + A + D K
Sbjct: 419 SKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDI 478
Query: 231 -------------------------------NVVSWSAMLAGYSQNNKPKESLKLFHE-- 257
NV S+++ YS+ P+ +LK+F
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS 538
Query: 258 -----------------------------MMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
M+ G+ P+ ++ SVL A + L G
Sbjct: 539 TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS 598
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG 348
+H + + G+ L NA++DMY KCG + A +F + ++L++WN MI GY ++G
Sbjct: 599 LHG-YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG 657
Query: 349 QAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY 408
A+++FD+M+ G PDD+TF++L++AC+H G + EG+ F M+++YGI+P EHY
Sbjct: 658 DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHY 717
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP 468
+ M+DLLGR GLL+EAY I +MP++ + W LL+A R H NVEL LSA LL ++P
Sbjct: 718 ANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEP 777
Query: 469 EDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHP 528
E YV L N+ + ++ LM++KG+ K PG S +EV F S P
Sbjct: 778 ERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSP 837
Query: 529 QSEEIYKVLDEIFLSSELEDYD 550
EI+ VL+ L S + D D
Sbjct: 838 MKAEIFNVLNR--LKSNMVDED 857
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 222/493 (45%), Gaps = 47/493 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKA-CEELSGDF---EGESV 56
+WN+MI GY K R F RML V D S + C+E G+F EG+ +
Sbjct: 135 VWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE--GNFRREEGKQI 192
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK-DVVTWTTMFDGYASRNC 115
H + + D++ ++ LI Y G A VF E K +VV W M G+
Sbjct: 193 HGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGI 252
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
E +++L+ L V+ + L ACSQ + GR++H ++ K + + +
Sbjct: 253 CESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTS 312
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
LL MY KCG + A +F + + + W
Sbjct: 313 LLSMYSKCGMVGEAETVFSCVVDKRLEIW------------------------------- 341
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
+AM+A Y++N+ +L LF M V+P+ L +V+S C L N G +H +
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE-LF 400
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
++ + + T+ +A+L +Y+KCG A VF ++ E+++V+W S+I+G NG+ K+A+
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 356 VFDQMR--CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMID 413
VF M+ KPD ++ AC+ + G + +M + G+ S +ID
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLID 519
Query: 414 LLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLL---SLDPED 470
L + GL + A ++ TSM + AW +++ +C N+ + NL+ + P+
Sbjct: 520 LYSKCGLPEMALKVFTSMSTENM-VAWNSMI-SCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 471 SGIYVLLANICAN 483
I +L I +
Sbjct: 578 VSITSVLVAISST 590
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 203/460 (44%), Gaps = 47/460 (10%)
Query: 36 SFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFD-- 93
+F LKAC L+ G+++H V LG+ + + L++ Y G+L +A +VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 94 -----ESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQM 148
S +DV W +M DGY + + F ML V P+ +L V+S +
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 149 GDI--EMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTS 206
G+ E G+++H M + ++ L AL+DMY K G + A +F +E +
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK------- 234
Query: 207 MVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPE 266
NVV W+ M+ G+ + + SL L+ V
Sbjct: 235 -----------------------SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 267 EHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF 326
+ L AC Q G IH V++ G+H + ++L MY+KCG + A VF
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCD-VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVF 330
Query: 327 NAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
+ + ++ L WN+M+A YA N A+++F MR PD T N+++ CS GL +
Sbjct: 331 SCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYN 390
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
G+ + + I+ S ++ L + G +AY + SM + AWG+L++
Sbjct: 391 YGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDM-VAWGSLISG 448
Query: 447 CRMHGNVELARLSACNLL----SLDPEDSGIYVLLANICA 482
+G + A ++ SL P DS I + N CA
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKP-DSDIMTSVTNACA 487
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 280/509 (55%), Gaps = 35/509 (6%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N MI + +++ P A F RML+ + D S L + L+ G+ VH K
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN---LGKQVHGYTLK 478
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMEL 122
G +L V + L Y+ G L+ + ++F KD W +M G+ A+ L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 123 FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK 182
F+ ML P+E TL AVL+ CS + G+ +H + + ++L +AL++MY K
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
CGSL AR+++DR+ D S +S+++GY++ G +++ FL
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG--FL------------------ 638
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
LF +M+ +G + A+ S+L A +LG +H ++ + G+
Sbjct: 639 -----------LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA-YITKIGLCTE 686
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
++ +++L MY+K GSI+ + F+ I+ +L++W ++IA YA +G+A +A+ V++ M+
Sbjct: 687 PSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
GFKPD +TFV +L+ACSHGGL+ E + +M ++YGI+P+ HY CM+D LGR+G L+
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLR 806
Query: 423 EAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICA 482
EA I +M ++P WG LL AC++HG VEL +++A + L+P D+G Y+ L+NI A
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILA 866
Query: 483 NERKWGDVKRVRSLMRDKGVKKIPGHSLV 511
+W +V+ R LM+ GV+K PG S V
Sbjct: 867 EVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 237/509 (46%), Gaps = 50/509 (9%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N MI GY++ R + +F +M E + S+ + AC L E V C K
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMEL 122
+G+ +V + LI ++ + A +VF +S +V W T+ G +L
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 123 FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK 182
F+ M G +P+ T +VL+AC+ + + G+ V + +K
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARV-------------------IK 279
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
CG+ DVF T++V+ YAKCG + A + P+ +VVSW+ ML+GY
Sbjct: 280 CGA-------------EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGY 326
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
+++N +L++F EM +GV + SV+SACG+ S + +H +V + G +
Sbjct: 327 TKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHA-WVFKSGFYLD 385
Query: 303 VTLANAILDMYAKCGSIEAAAEVF---NAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
++A A++ MY+K G I+ + +VF + I +N+V N MI ++ + + +A+ +F +
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTR 443
Query: 360 MRCMGFKPDDITFVNLLTA--CSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
M G + D+ + +LL+ C + G Q + YT++ G+ S + L +
Sbjct: 444 MLQEGLRTDEFSVCSLLSVLDCLNLG----KQVHGYTLKS--GLVLDLTVGSSLFTLYSK 497
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLL--SLDPEDSGIYV 475
G L+E+Y+L +P + A W ++++ +G + A +L P++S +
Sbjct: 498 CGSLEESYKLFQGIPFKD-NACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 476 LLANICANERKWGDVKRVRSLMRDKGVKK 504
+L +C++ K + G+ K
Sbjct: 557 VL-TVCSSHPSLPRGKEIHGYTLRAGIDK 584
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 236/525 (44%), Gaps = 56/525 (10%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W M+ GY K+ + A F M VE++ + + AC S E VH V
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVF---DESSLKDVVTWTTMFDGYASRNCSEL 118
K GF + V LI Y+ G + + +VF D+ +++V M ++
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK 436
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+ LF ML+ + +E ++ ++LS + + +G++VH K + L + ++L
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFT 493
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
+Y KCGSL + +LF + +D W SM++G+ + G L
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL--------------------- 532
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+E++ LF EM+ G P+E L +VL+ C L G IH + + G
Sbjct: 533 ----------REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG-YTLRAG 581
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ + L +A+++MY+KCGS++ A +V++ + E + VS +S+I+GY+ +G + +F
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEG-QEYFYTMERNYGIKPKREHYSCMIDLLGR 417
M GF D ++L A + S G Q + Y + +P S ++ + +
Sbjct: 642 DMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSK 699
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLL---SLDPEDSGIY 474
G + + + + + P AW AL+ + HG A L NL+ P D +
Sbjct: 700 FGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHGKANEA-LQVYNLMKEKGFKP-DKVTF 756
Query: 475 VLLANICANERKWGDVKR----VRSLMRDKGVKKIPGHSLVEVDG 515
V + + C++ G V+ + S+++D G++ H + VD
Sbjct: 757 VGVLSACSH---GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDA 798
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 12/251 (4%)
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM 259
DVF S+++ Y+ G + +A + D P +VVS + M++GY Q+ +ESL+ F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 260 GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI 319
G E + SV+SAC L + H I+ G + +A++D+++K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCH-TIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 320 EAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGF-KPDDITFVNLLTA 378
E A +VF N+ WN++IAG N ++F +M C+GF KPD T+ ++L A
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPDSYTYSSVLAA 260
Query: 379 CSHGGLISEGQEYFYTMERNYGIKPKREHY---SCMIDLLGRTGLLKEAYELITSMPMQP 435
C+ S + F + + IK E + ++DL + G + EA E+ + +P P
Sbjct: 261 CA-----SLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NP 314
Query: 436 CEAAWGALLNA 446
+W +L+
Sbjct: 315 SVVSWTVMLSG 325
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 146/351 (41%), Gaps = 32/351 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W +MI G+ + A F ML D + L C G+ +H
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ G D + + + L++ Y+ G LK AR+V+D D V+ +++ GY+ +
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL 638
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF M+ + + ++L A + + +G +VH + K + ++ ++LL MY
Sbjct: 639 LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYS 698
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K GS+ + F ++ D+ +WT A++A
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWT-------------------------------ALIAS 727
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y+Q+ K E+L++++ M G P++ V VLSAC + ++ V + G+ P
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEP 787
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQAK 351
++D + G + A N + + + + W +++A +G+ +
Sbjct: 788 ENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 288/547 (52%), Gaps = 40/547 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKAC-EELSGDF--EGESVHC 58
WN++I GY + + +M R + + + LKAC L+ F +G ++HC
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGY-----ASR 113
KLG + +++VR L+ YA G LK A ++F K+VVT+ M G+ +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 114 NCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLH 173
S A +LF M R +EP+ T VL ACS +E GR++H + K N +
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ------ 390
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
D F ++++ YA G E+ + T +++
Sbjct: 391 -------------------------SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIA 425
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
SW++M+ + QN + + + LF ++ + + PEE+ + ++SAC + L+ G I Q +
Sbjct: 426 SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI-QGY 484
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
I+ G+ ++ + + MYAK G++ A +VF + ++ ++++MI+ A +G A +A
Sbjct: 485 AIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMID 413
+N+F+ M+ G KP+ F+ +L AC HGGL+++G +YF M+ +Y I P +H++C++D
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 414 LLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI 473
LLGRTG L +A LI S Q W ALL++CR++ + + + A L+ L+PE SG
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 664
Query: 474 YVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEI 533
YVLL NI + + VR LMRD+GVKK P S + + + F VAD SHP S+ I
Sbjct: 665 YVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMI 724
Query: 534 YKVLDEI 540
Y +L+ +
Sbjct: 725 YTMLETM 731
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 206/462 (44%), Gaps = 40/462 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+N++I GY + A FL +++D ++ AL C E GE +H +V
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVV 175
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G ++ + N LI Y+ G L A +FD +D V+W ++ GY +E +
Sbjct: 176 VNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLN 235
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACS---QMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
L M R + L +VL AC G IE G +H K M + + ALLD
Sbjct: 236 LLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLD 295
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY K GSL A +LF M +++V ++ +M++G+ + ++
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI--------------------- 334
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+ E+ KLF +M G+ P VL AC L G IH + +
Sbjct: 335 -----TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHA-LICKNN 388
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ +A++++YA GS E + F + S++++ SW SMI + N Q + A ++F
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM----IDL 414
Q+ +P++ T +++AC+ +S G++ + Y IK + ++ + I +
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISM 503
Query: 415 LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
++G + A ++ + P A + A++++ HG+ A
Sbjct: 504 YAKSGNMPLANQVFIEV-QNPDVATYSAMISSLAQHGSANEA 544
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 175/373 (46%), Gaps = 50/373 (13%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L AR++FD ++++++ ++ GY E AMELF +++ ++ T L
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
C + D+++G +H + + + L N L+DMY KCG L A LFDR + RD SW
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
S+++GY + G E E L L +M G+
Sbjct: 218 NSLISGYVRVGAAE-------------------------------EPLNLLAKMHRDGLN 246
Query: 265 PEEHALVSVLSACGQLSCLNL-------GHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
+AL SVL AC C+NL G IH + + GM + + A+LDMYAK G
Sbjct: 247 LTTYALGSVLKAC----CINLNEGFIEKGMAIH-CYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 318 SIEAAAEVFNAISERNLVSWNSMIAGY-----AANGQAKQAVNVFDQMRCMGFKPDDITF 372
S++ A ++F+ + +N+V++N+MI+G+ + + +A +F M+ G +P TF
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361
Query: 373 VNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP 432
+L ACS + G++ + +N + S +I+L G ++ + S
Sbjct: 362 SVVLKACSAAKTLEYGRQIHALICKN-NFQSDEFIGSALIELYALMGSTEDGMQCFASTS 420
Query: 433 MQPCEAAWGALLN 445
Q A+W ++++
Sbjct: 421 KQDI-ASWTSMID 432
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 126/226 (55%), Gaps = 7/226 (3%)
Query: 211 YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
Y KC +L AR+ D+ P +N++S++++++GY+Q +++++LF E A + ++
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
L CG+ L+LG +H V+ G+ V L N ++DMY+KCG ++ A +F+
Sbjct: 152 AGALGFCGERCDLDLGELLH-GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS---HGGLISE 387
ER+ VSWNS+I+GY G A++ +N+ +M G ++L AC + G I +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 388 GQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP 432
G + YT + G++ + ++D+ + G LKEA +L + MP
Sbjct: 271 GMAIHCYTAK--LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP 314
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 266/469 (56%), Gaps = 8/469 (1%)
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
G+ +H + K GF +L + L+ + G L +AR+VFDE + + M GY
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDI-----EMGRRVHENMEKKNMR 167
+ + L M + + TL VL A + G + R VH + K ++
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQT 227
L AL+D YVK G L +AR +F+ M+ +V TSM++GY G +E+A + T
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 228 PHKNVVSWSAMLAGYSQNNKP-KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLG 286
K++V ++AM+ G+S++ + K S+ ++ M AG P SV+ AC L+ +G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 287 HWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAA 346
+H +++ G++ + + +++LDMYAKCG I A VF+ + E+N+ SW SMI GY
Sbjct: 293 QQVHAQ-IMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGK 351
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE 406
NG ++A+ +F +M+ +P+ +TF+ L+ACSH GL+ +G E F +M+R+Y +KPK E
Sbjct: 352 NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 407 HYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSL 466
HY+C++DL+GR G L +A+E +MP +P W ALL++C +HGNVELA ++A L L
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKL 471
Query: 467 DPED-SGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVD 514
+ + G Y+ L+N+ A+ KW +V ++R +M+ + + K G S D
Sbjct: 472 NADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 7/254 (2%)
Query: 1 MWNTMIRGY-RKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV 59
++N M+ G+ R + ++ M R + +F + AC L+ G+ VH
Sbjct: 239 VYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQ 298
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ K G + + + + L+ YA G + AR VFD+ K+V +WT+M DGY E A
Sbjct: 299 IMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEA 358
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLD 178
+ELF M +EPN VT + LSACS G ++ G + E+M++ +M+ + + ++D
Sbjct: 359 LELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVD 418
Query: 179 MYVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLE----NARRFLDQTPHKNVV 233
+ + G L A E M R D W ++++ G++E A K
Sbjct: 419 LMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPG 478
Query: 234 SWSAMLAGYSQNNK 247
++ A+ Y+ N+K
Sbjct: 479 AYLALSNVYASNDK 492
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 276/515 (53%), Gaps = 37/515 (7%)
Query: 28 HRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKH 87
H ++ + S + A+K+C + +HC V K + + L+ Y G
Sbjct: 28 HSLDANVSSLIAAVKSCVSIE---LCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVC 84
Query: 88 AREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDV--EPNEVTLIAVLSAC 145
A ++FDE +D+V+W ++ GY+ R E+ + M+ +V PNEVT ++++SAC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 146 SQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWT 205
G E GR +H LV + + ++ + F
Sbjct: 145 VYGGSKEEGRCIH--------------------------GLVMKFGVLEEVKVVNAF--- 175
Query: 206 SMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP 265
+N Y K GDL ++ + + KN+VSW+ M+ + QN ++ L F+ G P
Sbjct: 176 --INWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP 233
Query: 266 EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
++ ++VL +C + + L IH ++ G + + A+LD+Y+K G +E ++ V
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHG-LIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 326 FNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
F+ I+ + ++W +M+A YA +G + A+ F+ M G PD +TF +LL ACSH GL+
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 386 SEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLN 445
EG+ YF TM + Y I P+ +HYSCM+DLLGR+GLL++AY LI MPM+P WGALL
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 446 ACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKI 505
ACR++ + +L +A L L+P D YV+L+NI + W D R+R+LM+ KG+ +
Sbjct: 413 ACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRA 472
Query: 506 PGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
G S +E + +F+V D SHP+SE+I K L EI
Sbjct: 473 SGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 507
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 1/196 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI + + +YF R E D +F+ L++CE++ + +H ++
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
GF + L+ Y+ G L+ + VF E + D + WT M YA+ A++
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMY 180
F LM+ + P+ VT +L+ACS G +E G+ E M K+ + L+ ++ ++D+
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 181 VKCGSLVAARELFDRM 196
+ G L A L M
Sbjct: 383 GRSGLLQDAYGLIKEM 398
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 279/534 (52%), Gaps = 77/534 (14%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N ++RG ++ P S + M + V D +F F LKAC +L G + H V +
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMEL 122
GF V+N LI F+A+ G L A E+FD+S+ V W++M GYA R + AM L
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 123 FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK 182
F+ M D +V +++ C +K
Sbjct: 201 FDEMPYKD----QVAWNVMITGC-----------------------------------LK 221
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
C + +ARELFDR +DV +W +M++GY CG
Sbjct: 222 CKEMDSARELFDRFTEKDVVTWNAMISGYVNCG--------------------------- 254
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV----IEKG 298
PKE+L +F EM AG P+ ++S+LSAC L L G +H + + +
Sbjct: 255 ----YPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
++ + NA++DMYAKCGSI+ A EVF + +R+L +WN++I G A + A+ ++ +F+
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFE 369
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M+ + P+++TF+ ++ ACSH G + EG++YF M Y I+P +HY CM+D+LGR
Sbjct: 370 EMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRA 429
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G L+EA+ + SM ++P W LL AC+++GNVEL + + LLS+ ++SG YVLL+
Sbjct: 430 GQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLS 489
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGE--FKEFLVADESHPQS 530
NI A+ +W V++VR + D VKK G SL+E D + +L++ E +S
Sbjct: 490 NIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESRS 543
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCVV 60
WN MI GY P A F M D + + L AC L GD E G+ +H +
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL-GDLETGKRLHIYI 301
Query: 61 RKLGFDSELL-----VRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
+ S + + N LI YA G + A EVF +D+ TW T+ G A +
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH- 360
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHN 174
+E ++E+F M R V PNEVT I V+ ACS G ++ GR+ M + N+ ++ +
Sbjct: 361 AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYG 420
Query: 175 ALLDMYVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLE 218
++DM + G L A + M+ + W +++ G++E
Sbjct: 421 CMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVE 465
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 285/543 (52%), Gaps = 36/543 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NT+I GY AR A F RM + E+D + + AC + + +HC
Sbjct: 108 YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSV 165
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVF---DESSLKDVVTWTTMFDGYASRNCSEL 118
GFDS V N + +Y+ G L+ A VF DE L+D V+W +M Y
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE--LRDEVSWNSMIVAYGQHKEGAK 223
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+ L+ M+ + + TL +VL+A + + + GR+ H + K + ++ + L+D
Sbjct: 224 ALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLID 283
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
Y KCG C + ++ + + ++V W+ M
Sbjct: 284 FYSKCGG----------------------------CDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 239 LAGYSQNNK-PKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
++GYS N + +E++K F +M G P++ + V V SAC LS + IH +
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
+++ NA++ +Y K G+++ A VF+ + E N VS+N MI GYA +G +A+ ++
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
+M G P+ ITFV +L+AC+H G + EGQEYF TM+ + I+P+ EHYSCMIDLLGR
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLL 477
G L+EA I +MP +P AW ALL ACR H N+ LA +A L+ + P + YV+L
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVML 555
Query: 478 ANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
AN+ A+ RKW ++ VR MR K ++K PG S +EV + F+ D SHP E+ + L
Sbjct: 556 ANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYL 615
Query: 538 DEI 540
+E+
Sbjct: 616 EEM 618
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 160/362 (44%), Gaps = 29/362 (8%)
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
D+ G+ +H K + S L N +++Y KCG L AR F E +VFS+ +V
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
YAK + AR+ D+ P + VS++ +++GY+ + ++ LF M G +
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 270 LVSVLSAC-------GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
L +++AC QL C F + G ++ NA + Y+K G + A
Sbjct: 143 LSGLIAACCDRVDLIKQLHC----------FSVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 323 AEVFNAISE-RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
VF + E R+ VSWNSMI Y + + +A+ ++ +M GFK D T ++L A +
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAY--ELITSMPMQPCEAA 439
+ G+++ + + G S +ID + G Y E + + P
Sbjct: 253 LDHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 440 WGALLNACRMHGNVELARLSACNLLSLD-----PEDSGIYVLLANICANERKWGDVKRVR 494
W +++ M N EL+ + + + P+D +V + + C+N K++
Sbjct: 312 WNTMISGYSM--NEELSEEAVKSFRQMQRIGHRPDDCS-FVCVTSACSNLSSPSQCKQIH 368
Query: 495 SL 496
L
Sbjct: 369 GL 370
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 41/248 (16%)
Query: 1 MWNTMIRGYRKARNPNI---AFSYFLRMLR--HRVEMDCRSFVFALKACEELSGDFEGES 55
+WNTMI GY + N + A F +M R HR + DC SFV AC LS + +
Sbjct: 311 VWNTMISGY--SMNEELSEEAVKSFRQMQRIGHRPD-DC-SFVCVTSACSNLSSPSQCKQ 366
Query: 56 VHCVVRKLGFDSELL-VRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRN 114
+H + K S + V N LI Y G L+ AR VFD + V++ M GYA
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
A+ L+ ML + PN++T +AVLSAC+ G ++ G+ M
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM------------- 473
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK-NVV 233
+E F ++E + ++ M++ + G LE A RF+D P+K V
Sbjct: 474 ---------------KETF-KIEP-EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSV 516
Query: 234 SWSAMLAG 241
+W+A+L
Sbjct: 517 AWAALLGA 524
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 278/525 (52%), Gaps = 34/525 (6%)
Query: 31 EMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHARE 90
EM + L AC + +G+ VH + K + +R L+ FY L+ AR+
Sbjct: 49 EMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARK 108
Query: 91 VFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGD 150
V DE K+VV+WT M Y+ S A+ +F M+R D +PNE T VL++C +
Sbjct: 109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASG 168
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNG 210
+ +G+++H + K N + + ++LLDMY
Sbjct: 169 LGLGKQIHGLIVKWNYDSHIFVGSSLLDMY------------------------------ 198
Query: 211 YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
AK G ++ AR + P ++VVS +A++AGY+Q +E+L++FH + G+ P
Sbjct: 199 -AKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTY 257
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
S+L+A L+ L+ G H H V+ + + L N+++DMY+KCG++ A +F+ +
Sbjct: 258 ASLLTALSGLALLDHGKQAHCH-VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC-MGFKPDDITFVNLLTACSHGGLISEGQ 389
ER +SWN+M+ GY+ +G ++ + +F MR KPD +T + +L+ CSHG + G
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
Query: 390 EYFYTM-ERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACR 448
F M YG KP EHY C++D+LGR G + EA+E I MP +P G+LL ACR
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACR 436
Query: 449 MHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGH 508
+H +V++ L+ ++PE++G YV+L+N+ A+ +W DV VR++M K V K PG
Sbjct: 437 VHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR 496
Query: 509 SLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTDI 553
S ++ + F D +HP+ EE+ + EI + + Y D+
Sbjct: 497 SWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDL 541
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 155/333 (46%), Gaps = 33/333 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI Y + + + A + F M+R + + +F L +C SG G+ +H ++
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K +DS + V + L+ YA G +K ARE+F+ +DVV+ T + GYA E A+E
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F+ + + PN VT ++L+A S + ++ G++ H ++ ++ + L N+L+DMY
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYS 300
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KCG+L AR LFD M R SW +M L G
Sbjct: 301 KCGNLSYARRLFDNMPERTAISWNAM-------------------------------LVG 329
Query: 242 YSQNNKPKESLKLFHEMMGAG-VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI-EKGM 299
YS++ +E L+LF M V P+ L++VLS C + G I V E G
Sbjct: 330 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 389
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISER 332
P I+DM + G I+ A E + +
Sbjct: 390 KPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 284/554 (51%), Gaps = 24/554 (4%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNT++ + A Y M+ VE D + L AC L G+ +H
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 62 KLG-FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G D V + L+ Y + + R VFD + + W M GY+ + A+
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 121 ELF-NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
LF + + N T+ V+ AC + G +H + K+ + + N L+DM
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y + G + A +F +ME RD+ +W +M+ GY E+A L + + L
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN---------L 500
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+ SLK P L+++L +C LS L G IH + I+ +
Sbjct: 501 ERKVSKGASRVSLK-----------PNSITLMTILPSCAALSALAKGKEIHA-YAIKNNL 548
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V + +A++DMYAKCG ++ + +VF+ I ++N+++WN +I Y +G ++A+++
Sbjct: 549 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRM 608
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G KP+++TF+++ ACSH G++ EG FY M+ +YG++P +HY+C++DLLGR G
Sbjct: 609 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 668
Query: 420 LLKEAYELITSMPMQPCEA-AWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
+KEAY+L+ MP +A AW +LL A R+H N+E+ ++A NL+ L+P + YVLLA
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLA 728
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
NI ++ W VR M+++GV+K PG S +E E +F+ D SHPQSE++ L+
Sbjct: 729 NIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLE 788
Query: 539 EIFLSSELEDYDTD 552
++ E Y D
Sbjct: 789 TLWERMRKEGYVPD 802
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 214/469 (45%), Gaps = 55/469 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELS---GDFEGESVHC 58
WN++I +A F ML VE + V + AC L G G+ VH
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 59 V-VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
+RK +S + N L+ Y G L ++ + +D+VTW T+
Sbjct: 227 YGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 284
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE-NMEKKNMRCSLNLHNAL 176
A+E M+ VEP+E T+ +VL ACS + + G+ +H ++ ++ + + +AL
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
+DMY C +++ R +FD M R + W +M+
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI---------------------------- 376
Query: 237 AMLAGYSQNNKPKESLKLFHEM-MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
AGYSQN KE+L LF M AG++ + V+ AC + + IH FV+
Sbjct: 377 ---AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG-FVV 432
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
++G+ + N ++DMY++ G I+ A +F + +R+LV+WN+MI GY + + A+
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 356 VFDQMRCM-----------GFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKP 403
+ +M+ + KP+ IT + +L +C+ +++G+E + Y ++ N
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 404 KREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
S ++D+ + G L+ + ++ +P Q W ++ A MHGN
Sbjct: 553 AVG--SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 199/435 (45%), Gaps = 38/435 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W ++R ++ A ++ M+ ++ D +F LKA +L G+ +H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 62 KLGFDSE-LLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G+ + + V N L++ Y G +VFD S ++ V+W ++ S E+A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIE---MGRRVHENMEKKNMRCSLNLHNALL 177
E F ML +VEP+ TL++V++ACS + E MG++VH +K S + N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLV 243
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
MY K G L +++ L RD +V+W+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRD-------------------------------LVTWNT 272
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
+L+ QN + E+L+ EM+ GV P+E + SVL AC L L G +H + +
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
+ + + +A++DMY C + + VF+ + +R + WN+MIAGY+ N K+A+ +F
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 358 DQM-RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG 416
M G + T ++ AC G S +E + G+ R + ++D+
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 417 RTGLLKEAYELITSM 431
R G + A + M
Sbjct: 452 RLGKIDIAMRIFGKM 466
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 156/357 (43%), Gaps = 45/357 (12%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFEGESVHCV 59
+WN MI GY + + A F+ M + + + + AC E++H
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V K G D + V+N L+ Y+ G + A +F + +D+VTW TM GY E A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 120 MELFNLML-----------RGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRC 168
+ L + M R ++PN +TL+ +L +C+ + + G+ +H K N+
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 169 SLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP 228
+ + +AL+DMY KCG L +R++FD++ ++V +W ++ Y G+
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN------------ 598
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
+E++ L MM GV P E +SV +AC ++ G
Sbjct: 599 -------------------GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE--RNLVSWNSMIAG 343
I + G+ PS ++D+ + G I+ A ++ N + +W+S++
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 285/575 (49%), Gaps = 39/575 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTM+ Y + A + F ++ + D SF L C L G + +V
Sbjct: 38 WNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVI 97
Query: 62 KLGFDSELLVRNGLIHFYA---------------------DRGW------------LKHA 88
+ GF + L V N LI Y + W + A
Sbjct: 98 RSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAA 157
Query: 89 REVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACS-Q 147
+VF E + W M G+A E + LF ML + +P+ T ++++ACS
Sbjct: 158 LDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSAD 217
Query: 148 MGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM 207
++ GR VH M K ++ N++L Y K GS A + +E SW S+
Sbjct: 218 SSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
++ K G+ E A P KN+V+W+ M+ GY +N +++L+ F EMM +GV +
Sbjct: 278 IDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDH 337
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
A +VL AC L+ L G IH +I G + NA++++YAKCG I+ A F
Sbjct: 338 FAYGAVLHACSGLALLGHGKMIHG-CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG 396
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
I+ ++LVSWN+M+ + +G A QA+ ++D M G KPD++TF+ LLT CSH GL+ E
Sbjct: 397 DIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEE 456
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE----AAWGAL 443
G F +M ++Y I + +H +CMID+ GR G L EA +L T+ + ++W L
Sbjct: 457 GCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
Query: 444 LNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVK 503
L AC H + EL R + L +P + +VLL+N+ + +W + + VR M ++G+K
Sbjct: 517 LGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMK 576
Query: 504 KIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
K PG S +EV + F+V D SHP+ EE+ + L+
Sbjct: 577 KTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLN 611
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 203/454 (44%), Gaps = 69/454 (15%)
Query: 69 LLVR-NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLML 127
+LVR I A G + AR+VFD D V W TM Y+ + A+ LF +
Sbjct: 3 VLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLR 62
Query: 128 RGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLV 187
D +P++ + A+LS C+ +G+++ GR++ + + SL ++N+L+DMY KC +
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 188 AARELFDRM--ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQN 245
+A ++F M ++R+ +W S++ Y E A + P + +W+ M++G++
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 246 NKPKESLKLFHEMMGAGVVPEEHALVSVLSAC-GQLSCLNLGHWIHQHFVIEKGMHPSVT 304
K + L LF EM+ + P+ + S+++AC S + G +H +++ G +V
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHA-VMLKNGWSSAVE 241
Query: 305 LANAILDMYAKCGS-------------------------------IEAAAEVFNAISERN 333
N++L Y K GS E A EVF+ E+N
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 334 LVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS-----------HG 382
+V+W +MI GY NG +QA+ F +M G D + +L ACS HG
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 383 GLISEG-QEYFYT----------------MERNYGIKPKRE--HYSCMIDLLGRTGLLKE 423
LI G Q Y Y +R +G ++ ++ M+ G GL +
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 424 AYELITSM---PMQPCEAAWGALLNACRMHGNVE 454
A +L +M ++P + LL C G VE
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVE 455
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 285/542 (52%), Gaps = 34/542 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVF--ALKACEELSGDFEGESVHCV 59
W+++I G+ + A S+ ML V ++F +LKAC L G +H +
Sbjct: 237 WSSIIAGFSQLGFEFEALSHLKEMLSFGV-FHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K + L YA G+L AR VFD+ D +W + G A+ ++ A
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ +F+ M P+ ++L ++L A ++ + G ++H + K L + N+LL M
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y C L LF+ D N + + VSW+ +L
Sbjct: 416 YTFCSDLYCCFNLFE---------------------DFRN---------NADSVSWNTIL 445
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
Q+ +P E L+LF M+ + P+ + ++L C ++S L LG +H + ++ G+
Sbjct: 446 TACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC-YSLKTGL 504
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
P + N ++DMYAKCGS+ A +F+++ R++VSW+++I GYA +G ++A+ +F +
Sbjct: 505 APEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKE 564
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M+ G +P+ +TFV +LTACSH GL+ EG + + TM+ +GI P +EH SC++DLL R G
Sbjct: 565 MKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAG 624
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
L EA I M ++P W LL+AC+ GNV LA+ +A N+L +DP +S +VLL +
Sbjct: 625 RLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCS 684
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDE 539
+ A+ W + +RS M+ VKKIPG S +E++ + F D HP+ ++IY VL
Sbjct: 685 MHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHN 744
Query: 540 IF 541
I+
Sbjct: 745 IW 746
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 201/434 (46%), Gaps = 37/434 (8%)
Query: 35 RSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE 94
R+++ + AC +G +H + + ++ N ++ Y G L+ AREVFD
Sbjct: 68 RTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 95 SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
+++V++T++ GY+ A+ L+ ML+ D+ P++ +++ AC+ D+ +G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
+++H + K L NAL+ MYV+ + A +F + +D+ SW+S++
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSII------ 241
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV-PEEHALVSV 273
AG+SQ E+L EM+ GV P E+ S
Sbjct: 242 -------------------------AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 274 LSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERN 333
L AC L + G IH I+ + + ++ DMYA+CG + +A VF+ I +
Sbjct: 277 LKACSSLLRPDYGSQIHG-LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 334 LVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG-QEYF 392
SWN +IAG A NG A +AV+VF QMR GF PD I+ +LL A + +S+G Q +
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 393 YTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
Y ++ +G + ++ + L + L +W +L AC H
Sbjct: 396 YIIK--WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Query: 453 -VELARLSACNLLS 465
VE+ RL L+S
Sbjct: 454 PVEMLRLFKLMLVS 467
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 38/446 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+ ++I GY + A +L+ML+ + D +F +KAC S G+ +H V
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
KL S L+ +N LI Y + A VF +KD+++W+++ G++ A+
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 122 LFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
ML G PNE + L ACS + + G ++H K + + +L DMY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+CG L +AR +FD++E D SW NV+ +A
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASW--------------------------NVI-----IA 344
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
G + N E++ +F +M +G +P+ +L S+L A + L+ G IH ++I+ G
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS-YIIKWGFL 403
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAI-SERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+T+ N++L MY C + +F + + VSWN+++ + Q + + +F
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEG-QEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M +PD IT NLL C + G Q + Y+++ G+ P++ + +ID+ +
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT--GLAPEQFIKNGLIDMYAKC 521
Query: 419 GLLKEAYELITSMPMQPCEAAWGALL 444
G L +A + SM + +W L+
Sbjct: 522 GSLGQARRIFDSMDNRDV-VSWSTLI 546
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 176/537 (32%), Positives = 280/537 (52%), Gaps = 33/537 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNT+I + ++ A F RM E + S A+ AC L G+ +H
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K GF+ + V + L+ Y L+ AREVF + K +V W +M GY ++ S+ +E
Sbjct: 236 KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+ N M+ P++ TL ++L ACS+ ++ G+ +H + +R +N D+YV
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV----IRSVVNA-----DIYV 346
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
C S+++ Y KCG+ A +T SW+ M++
Sbjct: 347 NC----------------------SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y ++++++ +M+ GV P+ SVL AC QL+ L G IH + E +
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS-ISESRLET 443
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
L +A+LDMY+KCG+ + A +FN+I ++++VSW MI+ Y ++GQ ++A+ FD+M+
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G KPD +T + +L+AC H GLI EG ++F M YGI+P EHYSCMID+LGR G L
Sbjct: 504 KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Query: 422 KEAYELITSMPMQPCEAA-WGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
EAYE+I P A L +AC +H L A L+ P+D+ Y++L N+
Sbjct: 564 LEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNL 623
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
A+ W +RVR M++ G++K PG S +E+ + F D SH ++E +Y+ L
Sbjct: 624 YASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 258/538 (47%), Gaps = 41/538 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEM-DCRSFVFALKACEELSGDFEGESVHCV 59
+WN+++ GY K + F R+L + + D +F +KA L +F G +H +
Sbjct: 73 IWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTL 132
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V K G+ +++V + L+ YA +++ +VFDE +DV +W T+ + +E A
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA 192
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ELF M EPN V+L +SACS++ +E G+ +H KK +++AL+DM
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDM 252
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y KC L ARE+F +M + + +W SM+ GY GD
Sbjct: 253 YGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD----------------------- 289
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
K +++ + M+ G P + L S+L AC + L G +IH +VI +
Sbjct: 290 --------SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHG-YVIRSVV 340
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+ + + +++D+Y KCG A VF+ + SWN MI+ Y + G +AV V+DQ
Sbjct: 341 NADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQ 400
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M +G KPD +TF ++L ACS + +G++ ++ + ++ S ++D+ + G
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR-LETDELLLSALLDMYSKCG 459
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE--LARLSACNLLSLDPEDSGIYVLL 477
KEA+ + S+P + +W +++A HG L + L P+ + +L
Sbjct: 460 NEKEAFRIFNSIPKKDV-VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 478 ANICANERKWGDVKRVRSLMRDK-GVKKIPGH--SLVEVDGEFKEFLVADESHPQSEE 532
+ C + + + S MR K G++ I H ++++ G L A E Q+ E
Sbjct: 519 S-ACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 158/340 (46%), Gaps = 44/340 (12%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFY---ADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
VH + LG ++++ LI+ Y D +H E FD S DV W ++ GY+
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS--DVYIWNSLMSGYSK 83
Query: 113 RNCSELAMELFNLMLRGDV-EPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLN 171
+ +E+F +L + P+ T V+ A +G +GR +H + K C +
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
+ ++L+ MY K + ++FD M RDV SW ++++ + + G+ E A
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA----------- 192
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
L+LF M +G P +L +SAC +L L G IH+
Sbjct: 193 --------------------LELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHR 232
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
++KG + +A++DMY KC +E A EVF + ++LV+WNSMI GY A G +K
Sbjct: 233 K-CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSK 291
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACS------HGGLI 385
V + ++M G +P T ++L ACS HG I
Sbjct: 292 SCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 138/256 (53%), Gaps = 5/256 (1%)
Query: 199 RDVFSWTSMVNGYAKCGDLENARR-FLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHE 257
RDV S++N Y C D +AR F + +V W+++++GYS+N+ ++L++F
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 258 MMGAGV-VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
++ + VP+ +V+ A G L LG IH V++ G V +A++++ MYAK
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHT-LVVKSGYVCDVVVASSLVGMYAKF 155
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
E + +VF+ + ER++ SWN++I+ + +G+A++A+ +F +M GF+P+ ++ +
Sbjct: 156 NLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAI 215
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
+ACS + G+E + G + S ++D+ G+ L+ A E+ MP +
Sbjct: 216 SACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274
Query: 437 EAAWGALLNACRMHGN 452
AW +++ G+
Sbjct: 275 -VAWNSMIKGYVAKGD 289
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 301 bits (771), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 177/586 (30%), Positives = 290/586 (49%), Gaps = 76/586 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W+ MIR Y A + +ML V ++ F LKAC L +G+ +H V
Sbjct: 71 WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVN 130
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
F +++ V L+ FYA G L+ A +VFDE +D+V W M G++ C +
Sbjct: 131 CSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIG 190
Query: 122 LFNLMLRGD-VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
LF M R D + PN T++ + A + G + G+ VH + L + +LD+Y
Sbjct: 191 LFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVY 250
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGY----------------------------- 211
K ++ AR +FD ++ +W++M+ GY
Sbjct: 251 AKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA 310
Query: 212 --------AKCGDLENAR----------RFLDQTPHKNVV-------------------- 233
A+ GDL R LD T ++
Sbjct: 311 IGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG 370
Query: 234 -----SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
S+++++ G N +P+ES +LFHEM +G+ P+ L+ VL+AC L+ L G
Sbjct: 371 LKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSS 430
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG 348
H + V+ G + ++ NA++DMY KCG ++ A VF+ + +R++VSWN+M+ G+ +G
Sbjct: 431 CHGYCVVH-GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 349 QAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMER-NYGIKPKREH 407
K+A+++F+ M+ G PD++T + +L+ACSH GL+ EG++ F +M R ++ + P+ +H
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH 549
Query: 408 YSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLD 467
Y+CM DLL R G L EAY+ + MP +P G LL+AC + N EL + + SL
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG 609
Query: 468 PEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
E + VLL+N + +W D R+R + + +G+ K PG+S V+V
Sbjct: 610 -ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 180/401 (44%), Gaps = 50/401 (12%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDV--VTWTTMFDGYASRN 114
H + R L S ++ N L YA ++ AR VFDE + + W M YAS +
Sbjct: 24 HLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASND 82
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
+E A++L+ ML V P + T VL AC+ + I+ G+ +H ++ + + +
Sbjct: 83 FAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCT 142
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
AL+D Y KCG L A ++FD M RD+ +W
Sbjct: 143 ALVDFYAKCGELEMAIKVFDEMPKRDMVAW------------------------------ 172
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGA-GVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
+AM++G+S + + + LF +M G+ P +V + A G+ L G +H +
Sbjct: 173 -NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHG-Y 230
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
G + + ILD+YAK I A VF+ ++N V+W++MI GY N K+A
Sbjct: 231 CTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEA 290
Query: 354 VNVFDQMRCMGFKPDDITFVN------LLTACSHGGLISEGQ-EYFYTMERNYGIKPKRE 406
VF QM D++ V +L C+ G +S G+ + Y ++ + + +
Sbjct: 291 GEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQ 346
Query: 407 HYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
+ +I + G L +A+ + + ++ ++ +L+ C
Sbjct: 347 N--TIISFYAKYGSLCDAFRQFSEIGLKDV-ISYNSLITGC 384
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 121/223 (54%), Gaps = 9/223 (4%)
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVF--SWTSMVNG---YAKCGDLENARRFLDQTPH 229
+LL+ ++ +LV + + + R + S T +VN YA C ++E AR D+ PH
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 230 K--NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
N ++W M+ Y+ N+ +++L L+++M+ +GV P ++ VL AC L ++ G
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAAN 347
IH H V + + A++D YAKCG +E A +VF+ + +R++V+WN+MI+G++ +
Sbjct: 124 LIHSH-VNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 348 GQAKQAVNVF-DQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
+ +F D R G P+ T V + A G + EG+
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+S+L C + L LG IHQH + S T+ + +YA C +E A VF+ I
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 330 SER--NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
N ++W+ MI YA+N A++A++++ +M G +P T+ +L AC+ I +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 388 GQEYFYTMERNYGIKPKREHYSC--MIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLN 445
G+ + + + Y C ++D + G L+ A ++ MP + AW A+++
Sbjct: 122 GKLIHSHVNCS---DFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD-MVAWNAMIS 177
Query: 446 ACRMH 450
+H
Sbjct: 178 GFSLH 182
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 278/542 (51%), Gaps = 37/542 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDF--EGESVHCV 59
WN+++ + A M+ ++ +F AL AC + DF +G +H +
Sbjct: 330 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC--FTPDFFEKGRILHGL 387
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V G ++ N L+ Y G + +R V + +DVV W + GYA + A
Sbjct: 388 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 447
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDI-EMGRRVHENMEKKNMRCSLNLHNALLD 178
+ F M V N +T+++VLSAC GD+ E G+ +H + ++ N+L+
Sbjct: 448 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 507
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY AKCGDL +++ + ++N+++W+AM
Sbjct: 508 MY-------------------------------AKCGDLSSSQDLFNGLDNRNIITWNAM 536
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
LA + + +E LKL +M GV ++ + LSA +L+ L G +H ++ G
Sbjct: 537 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG-LAVKLG 595
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ NA DMY+KCG I ++ R+L SWN +I+ +G ++ F
Sbjct: 596 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 655
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M MG KP +TFV+LLTACSHGGL+ +G Y+ + R++G++P EH C+IDLLGR+
Sbjct: 656 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 715
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G L EA I+ MPM+P + W +LL +C++HGN++ R +A NL L+PED +YVL +
Sbjct: 716 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 775
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
N+ A +W DV+ VR M K +KK S V++ + F + D +HPQ+ EIY L+
Sbjct: 776 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 835
Query: 539 EI 540
+I
Sbjct: 836 DI 837
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 206/456 (45%), Gaps = 39/456 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++ Y + + +F F M R E++ + L + G +H +V
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K+GFDS + V N L+ YA G A VF + KD+++W ++ + + S A+
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
L M+ N VT + L+AC E GR +H + + + + NAL+ MY
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K G + +R + +M RDV +W +++ GYA
Sbjct: 409 KIGEMSESRRVLLQMPRRDVVAWNALIGGYA----------------------------- 439
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC---GQLSCLNLGHWIHQHFVIEKG 298
++ P ++L F M GV +VSVLSAC G L L G +H +++ G
Sbjct: 440 --EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHA-YIVSAG 494
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ N+++ MYAKCG + ++ ++FN + RN+++WN+M+A A +G ++ + +
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 554
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+MR G D +F L+A + ++ EGQ+ + + G + ++ D+ +
Sbjct: 555 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE 454
G + E +++ + +W L++A HG E
Sbjct: 614 GEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFE 648
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 39/448 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFA--LKACEELSGDF-EGESVHC 58
WNTM+ G + +F +M + + SFV A + AC F EG VH
Sbjct: 26 WNTMMSGIVRVGLYLEGMEFFRKMCD--LGIKPSSFVIASLVTACGRSGSMFREGVQVHG 83
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
V K G S++ V ++H Y G + +R+VF+E ++VV+WT++ GY+ + E
Sbjct: 84 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
++++ M V NE ++ V+S+C + D +GR++ + K + L + N+L+
Sbjct: 144 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 203
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
M G++ A +FD+M RD SW S+ YA+ G +E + R
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL------------ 251
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
++ FH+ + + V ++LS G + G IH V++ G
Sbjct: 252 -------------MRRFHDEVNSTTVS------TLLSVLGHVDHQKWGRGIHG-LVVKMG 291
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
V + N +L MYA G A VF + ++L+SWNS++A + +G++ A+ +
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 351
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M G + +TF + L AC +G+ + + G+ + + ++ + G+
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKI 410
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNA 446
G + E+ ++ MP + AW AL+
Sbjct: 411 GEMSESRRVLLQMPRRDV-VAWNALIGG 437
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 151/304 (49%), Gaps = 33/304 (10%)
Query: 79 YADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTL 138
Y G +K AR +FD +++ V+W TM G ME F M ++P+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 139 IAVLSACSQMGDI-EMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRME 197
++++AC + G + G +VH + K + L D+YV
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGL---------LSDVYVS--------------- 97
Query: 198 TRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHE 257
T++++ Y G + +R+ ++ P +NVVSW++++ GYS +P+E + ++
Sbjct: 98 -------TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 150
Query: 258 MMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
M G GV E+++ V+S+CG L +LG I V++ G+ + + N+++ M G
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ-VVKSGLESKLAVENSLISMLGSMG 209
Query: 318 SIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLT 377
+++ A +F+ +SER+ +SWNS+ A YA NG +++ +F MR + + T LL+
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 378 ACSH 381
H
Sbjct: 270 VLGH 273
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 130/248 (52%), Gaps = 10/248 (4%)
Query: 211 YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
Y K G ++ AR D P +N VSW+ M++G + E ++ F +M G+ P +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 271 VSVLSACGQL-SCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
S+++ACG+ S G +H FV + G+ V ++ AIL +Y G + + +VF +
Sbjct: 62 ASLVTACGRSGSMFREGVQVHG-FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE-- 387
+RN+VSW S++ GY+ G+ ++ ++++ MR G ++ + ++++C GL+ +
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 388 -GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
G++ + ++ G++ K + +I +LG G + A + M + +W ++ A
Sbjct: 178 LGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT-ISWNSIAAA 235
Query: 447 CRMHGNVE 454
+G++E
Sbjct: 236 YAQNGHIE 243
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 312 MYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDIT 371
MY K G ++ A +F+ + RN VSWN+M++G G + + F +M +G KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 372 FVNLLTACSH-GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITS 430
+L+TAC G + EG + + ++ G+ + ++ L G GL+ + ++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 431 MPMQPCEAAWGALL 444
MP + +W +L+
Sbjct: 120 MPDRNV-VSWTSLM 132
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 278/542 (51%), Gaps = 37/542 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDF--EGESVHCV 59
WN+++ + A M+ ++ +F AL AC + DF +G +H +
Sbjct: 313 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC--FTPDFFEKGRILHGL 370
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V G ++ N L+ Y G + +R V + +DVV W + GYA + A
Sbjct: 371 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 430
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDI-EMGRRVHENMEKKNMRCSLNLHNALLD 178
+ F M V N +T+++VLSAC GD+ E G+ +H + ++ N+L+
Sbjct: 431 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 490
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY AKCGDL +++ + ++N+++W+AM
Sbjct: 491 MY-------------------------------AKCGDLSSSQDLFNGLDNRNIITWNAM 519
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
LA + + +E LKL +M GV ++ + LSA +L+ L G +H ++ G
Sbjct: 520 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG-LAVKLG 578
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ NA DMY+KCG I ++ R+L SWN +I+ +G ++ F
Sbjct: 579 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 638
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M MG KP +TFV+LLTACSHGGL+ +G Y+ + R++G++P EH C+IDLLGR+
Sbjct: 639 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 698
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G L EA I+ MPM+P + W +LL +C++HGN++ R +A NL L+PED +YVL +
Sbjct: 699 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 758
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
N+ A +W DV+ VR M K +KK S V++ + F + D +HPQ+ EIY L+
Sbjct: 759 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 818
Query: 539 EI 540
+I
Sbjct: 819 DI 820
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 206/456 (45%), Gaps = 39/456 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++ Y + + +F F M R E++ + L + G +H +V
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K+GFDS + V N L+ YA G A VF + KD+++W ++ + + S A+
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
L M+ N VT + L+AC E GR +H + + + + NAL+ MY
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K G + +R + +M RDV +W +++ GYA
Sbjct: 392 KIGEMSESRRVLLQMPRRDVVAWNALIGGYA----------------------------- 422
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC---GQLSCLNLGHWIHQHFVIEKG 298
++ P ++L F M GV +VSVLSAC G L L G +H +++ G
Sbjct: 423 --EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHA-YIVSAG 477
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ N+++ MYAKCG + ++ ++FN + RN+++WN+M+A A +G ++ + +
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 537
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+MR G D +F L+A + ++ EGQ+ + + G + ++ D+ +
Sbjct: 538 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE 454
G + E +++ + +W L++A HG E
Sbjct: 597 GEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFE 631
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 39/448 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFA--LKACEELSGDF-EGESVHC 58
WNTM+ G + +F +M + + SFV A + AC F EG VH
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCD--LGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
V K G S++ V ++H Y G + +R+VF+E ++VV+WT++ GY+ + E
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
++++ M V NE ++ V+S+C + D +GR++ + K + L + N+L+
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
M G++ A +FD+M RD SW S+ YA+ G +E + R
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL------------ 234
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
++ FH+ + + V ++LS G + G IH V++ G
Sbjct: 235 -------------MRRFHDEVNSTTVS------TLLSVLGHVDHQKWGRGIHG-LVVKMG 274
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
V + N +L MYA G A VF + ++L+SWNS++A + +G++ A+ +
Sbjct: 275 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 334
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M G + +TF + L AC +G+ + + G+ + + ++ + G+
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKI 393
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNA 446
G + E+ ++ MP + AW AL+
Sbjct: 394 GEMSESRRVLLQMPRRDV-VAWNALIGG 420
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 33/286 (11%)
Query: 97 LKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDI-EMGR 155
+++ V+W TM G ME F M ++P+ + ++++AC + G + G
Sbjct: 3 VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 62
Query: 156 RVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCG 215
+VH + K + L D+YV T++++ Y G
Sbjct: 63 QVHGFVAKSGL---------LSDVYVS----------------------TAILHLYGVYG 91
Query: 216 DLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLS 275
+ +R+ ++ P +NVVSW++++ GYS +P+E + ++ M G GV E+++ V+S
Sbjct: 92 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVIS 151
Query: 276 ACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLV 335
+CG L +LG I V++ G+ + + N+++ M G+++ A +F+ +SER+ +
Sbjct: 152 SCGLLKDESLGRQIIGQ-VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 210
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
SWNS+ A YA NG +++ +F MR + + T LL+ H
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 122/231 (52%), Gaps = 10/231 (4%)
Query: 228 PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQL-SCLNLG 286
P +N VSW+ M++G + E ++ F +M G+ P + S+++ACG+ S G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 287 HWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAA 346
+H FV + G+ V ++ AIL +Y G + + +VF + +RN+VSW S++ GY+
Sbjct: 62 VQVHG-FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE---GQEYFYTMERNYGIKP 403
G+ ++ ++++ MR G ++ + ++++C GL+ + G++ + ++ G++
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKS-GLES 176
Query: 404 KREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE 454
K + +I +LG G + A + M + +W ++ A +G++E
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDT-ISWNSIAAAYAQNGHIE 226
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 296/547 (54%), Gaps = 8/547 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRML-RHRVEMDCRSFVFALKACEELSGDFEGESVHC-V 59
WN +I GY AF F ++ + V D + + L C +L+ G+ +H +
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+R + V N LI FYA G A F S KD+++W + D +A
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNM---RCSLNLHNAL 176
+ L + +L + + VT++++L C + I + VH K + L NAL
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNAL 476
Query: 177 LDMYVKCGSLVAARELFDRM-ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
LD Y KCG++ A ++F + E R + S+ S+++GY G ++A+ + ++ +W
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTW 536
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
S M+ Y+++ P E++ +F E+ G+ P ++++L C QL+ L+L H + +
Sbjct: 537 SLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYII- 595
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
+G + L +LD+YAKCGS++ A VF + + R+LV + +M+AGYA +G+ K+A+
Sbjct: 596 -RGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 356 VFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLL 415
++ M KPD + +LTAC H GLI +G + + ++ +G+KP E Y+C +DL+
Sbjct: 655 IYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLI 714
Query: 416 GRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYV 475
R G L +AY +T MP++P WG LL AC + ++L A +LL + +D+G +V
Sbjct: 715 ARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHV 774
Query: 476 LLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYK 535
L++N+ A + KW V +R+LM+ K +KK G S +EVDG+ F+ D SHP+ + I+
Sbjct: 775 LISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFD 834
Query: 536 VLDEIFL 542
+++ ++L
Sbjct: 835 LVNALYL 841
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 216/472 (45%), Gaps = 79/472 (16%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDF---EGESVHC 58
WN +I G+ + AF F ML+ E + + L C + + G +H
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS 251
Query: 59 -VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
VV++ + + V N L+ FY G ++ A +F KD+V+W + GYAS NC
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS-NCEW 310
Query: 118 L-AMELF-NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN-MRCSLNLHN 174
A +LF NL+ +GDV P+ VT+I++L C+Q+ D+ G+ +H + + + + ++ N
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
AL+ Y + G AA F M T+D+ SW ++++ +A ++ ++F
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA-----DSPKQF----------- 414
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
+ L L H ++ + + ++S+L C + + +H + V
Sbjct: 415 ---------------QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSV 459
Query: 295 IEKGMH--PSVTLANAILDMYAKCGSIEAAAEVFNAISE-RNLVSWNSMIAGYAANGQ-- 349
+H L NA+LD YAKCG++E A ++F +SE R LVS+NS+++GY +G
Sbjct: 460 KAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHD 519
Query: 350 -----------------------------AKQAVNVFDQMRCMGFKPDDITFVNLLTACS 380
+A+ VF +++ G +P+ +T +NLL C+
Sbjct: 520 DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCA 579
Query: 381 H-GGLISEGQEYFYTMERNYG-IKPKREHYSCMIDLLGRTGLLKEAYELITS 430
L Q + Y + G I+ K ++D+ + G LK AY + S
Sbjct: 580 QLASLHLVRQCHGYIIRGGLGDIRLK----GTLLDVYAKCGSLKHAYSVFQS 627
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 188/420 (44%), Gaps = 39/420 (9%)
Query: 33 DCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVF 92
D R F+ +KAC +S G ++H V KLG + V +++ YA + +++F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 93 DESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD-VEPNEVTLIAVLSACSQMGDI 151
+ D V W + G S +C M F M D +P+ VT VL C ++GD
Sbjct: 80 RQMDSLDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 152 EMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGY 211
G+ +H + K + + NAL+ MY K G +
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI------------------------- 173
Query: 212 AKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
+A D K+VVSW+A++AG+S+NN ++ + F M+ P +
Sbjct: 174 -----FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIA 228
Query: 272 SVLSACGQ----LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
+VL C ++C + G IH + V + V + N+++ Y + G IE AA +F
Sbjct: 229 NVLPVCASMDKNIACRS-GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFT 287
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG-FKPDDITFVNLLTACSHGGLIS 386
+ ++LVSWN +IAGYA+N + +A +F + G PD +T +++L C+ ++
Sbjct: 288 RMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLA 347
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
G+E + R+ + + +I R G AY + M + +W A+L+A
Sbjct: 348 SGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI-ISWNAILDA 406
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 286/542 (52%), Gaps = 40/542 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACE--ELSGDFEGESVHCV 59
+N +I G+ +P A + M + + D +F LK + ELS + + VH +
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS---DVKKVHGL 185
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE-SSLKDVVTWTTMFDGYASRNCSEL 118
KLGFDS+ V +GL+ Y+ ++ A++VFDE D V W + +GY+ E
Sbjct: 186 AFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFED 245
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+ +F+ M V + T+ +VLSA + GDI+ GR +H K + + NAL+D
Sbjct: 246 ALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALID 305
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY K L A +F+ M+ RD+F+W S++ + CGD +
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDG------------------- 346
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+L LF M+ +G+ P+ L +VL CG+L+ L G IH + ++
Sbjct: 347 ------------TLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL 394
Query: 299 MHPSVT---LANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
++ + + N+++DMY KCG + A VF+++ ++ SWN MI GY + A++
Sbjct: 395 LNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALD 454
Query: 356 VFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLL 415
+F M G KPD+ITFV LL ACSH G ++EG+ + ME Y I P +HY+C+ID+L
Sbjct: 455 MFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDML 514
Query: 416 GRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYV 475
GR L+EAYEL S P+ W ++L++CR+HGN +LA ++ L L+PE G YV
Sbjct: 515 GRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYV 574
Query: 476 LLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYK 535
L++N+ K+ +V VR MR + VKK PG S + + F +++HP+ + I+
Sbjct: 575 LMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHD 634
Query: 536 VL 537
L
Sbjct: 635 WL 636
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 160/364 (43%), Gaps = 46/364 (12%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCV 59
+WN ++ GY + A F +M V + + L A +SGD + G S+H +
Sbjct: 229 LWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAF-TVSGDIDNGRSIHGL 287
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K G S+++V N LI Y WL+ A +F+ +D+ TW ++ + +
Sbjct: 288 AVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGT 347
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNM--RCSLN--LHNA 175
+ LF ML + P+ VTL VL C ++ + GR +H M + R S N +HN+
Sbjct: 348 LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNS 407
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYA--KCGDLENARRFLDQTPHKNVV 233
L+DMYVKCG L AR +FD M +D SW M+NGY CG+L
Sbjct: 408 LMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGEL---------------- 451
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
+L +F M AGV P+E V +L AC LN G
Sbjct: 452 -----------------ALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE---RNLVSWNSMIAGYAANGQA 350
+ P+ ++DM + +E A E+ AIS+ N V W S+++ +G
Sbjct: 495 ETVYNILPTSDHYACVIDMLGRADKLEEAYEL--AISKPICDNPVVWRSILSSCRLHGNK 552
Query: 351 KQAV 354
A+
Sbjct: 553 DLAL 556
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 138/299 (46%), Gaps = 35/299 (11%)
Query: 134 NEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELF 193
N T IA L C+Q D G+++H M +K LD + G
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRK----------GFLDDSPRAG--------- 99
Query: 194 DRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLK 253
TS+VN YAKCG + A + ++V ++A+++G+ N P ++++
Sbjct: 100 -----------TSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAME 147
Query: 254 LFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMY 313
+ EM G++P+++ S+L + ++ +H + G + + ++ Y
Sbjct: 148 TYREMRANGILPDKYTFPSLLKGSDAMELSDVKK-VHG-LAFKLGFDSDCYVGSGLVTSY 205
Query: 314 AKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITF 372
+K S+E A +VF+ + +R + V WN+++ GY+ + + A+ VF +MR G T
Sbjct: 206 SKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTI 265
Query: 373 VNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
++L+A + G I G+ + + G + +ID+ G++ L+EA + +M
Sbjct: 266 TSVLSAFTVSGDIDNGRS-IHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 282/551 (51%), Gaps = 33/551 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NTMI GY K + FL L + + D + L+AC L + ++ +
Sbjct: 276 YNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K GF E VRN LI YA G + AR+VF+ KD V+W ++ GY AM+
Sbjct: 335 KAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF +M+ + + + +T + ++S +++ D++ G+ +H N K + L++ NAL+DMY
Sbjct: 395 LFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY- 453
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
AKCG++ ++ + + V+W+ +++
Sbjct: 454 ------------------------------AKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
+ L++ +M + VVP+ + L C L+ LG IH ++ G
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIH-CCLLRFGYES 542
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ + NA+++MY+KCG +E ++ VF +S R++V+W MI Y G+ ++A+ F M
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G PD + F+ ++ ACSH GL+ EG F M+ +Y I P EHY+C++DLL R+ +
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
+A E I +MP++P + W ++L ACR G++E A + ++ L+P+D G +L +N
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIF 541
A RKW V +R ++DK + K PG+S +EV F D+S PQSE IYK L+ ++
Sbjct: 723 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILY 782
Query: 542 LSSELEDYDTD 552
E Y D
Sbjct: 783 SLMAKEGYIPD 793
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 230/452 (50%), Gaps = 35/452 (7%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN++IR + K A ++ ++ +V D +F +KAC L G+ V+ +
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+GF+S+L V N L+ Y+ G L AR+VFDE ++D+V+W ++ GY+S E A+
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
E+++ + + P+ T+ +VL A + ++ G+ +H K + + ++N L+ MY
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+K AR +FD M+ RD S+ +M+ GY K +E
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE---------------------- 290
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
ES+++F E + P+ + SVL ACG L L+L +I+ +++++ G
Sbjct: 291 ---------ESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIY-NYMLKAGFV 339
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
T+ N ++D+YAKCG + A +VFN++ ++ VSWNS+I+GY +G +A+ +F M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
M + D IT++ L++ + + G+ ++ GI + +ID+ + G
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKG-LHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
+ ++ ++ +SM W +++AC G+
Sbjct: 459 VGDSLKIFSSMGTGDT-VTWNTVISACVRFGD 489
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 207/448 (46%), Gaps = 45/448 (10%)
Query: 39 FALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE-SSL 97
F +A S E +H +V LG DS LI Y+ + VF S
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA 68
Query: 98 KDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRV 157
K+V W ++ ++ A+E + + V P++ T +V+ AC+ + D EMG V
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 158 HENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDL 217
+E + L + NAL+DMY ++ G L
Sbjct: 129 YEQILDMGFESDLFVGNALVDMY-------------------------------SRMGLL 157
Query: 218 ENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC 277
AR+ D+ P +++VSW+++++GYS + +E+L+++HE+ + +VP+ + SVL A
Sbjct: 158 TRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAF 217
Query: 278 GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSW 337
G L + G +H F ++ G++ V + N ++ MY K A VF+ + R+ VS+
Sbjct: 218 GNLLVVKQGQGLHG-FALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 338 NSMIAGYAANGQAKQAVNVF----DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFY 393
N+MI GY +++V +F DQ FKPD +T ++L AC H +S + Y Y
Sbjct: 277 NTMICGYLKLEMVEESVRMFLENLDQ-----FKPDLLTVSSVLRACGHLRDLSLAK-YIY 330
Query: 394 TMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNV 453
G + + +ID+ + G + A ++ SM + +W ++++ G++
Sbjct: 331 NYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT-VSWNSIISGYIQSGDL 389
Query: 454 -ELARLSACNLLSLDPEDSGIYVLLANI 480
E +L ++ + D Y++L ++
Sbjct: 390 MEAMKLFKMMMIMEEQADHITYLMLISV 417
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 295 bits (754), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 274/502 (54%), Gaps = 33/502 (6%)
Query: 51 FEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGY 110
+G +H V K G LV N LI+FY+ +R F++S K TW+++ +
Sbjct: 32 IKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCF 91
Query: 111 ASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSL 170
A +++E M+ G++ P++ L + +C+ + ++GR VH
Sbjct: 92 AQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVH------------ 139
Query: 171 NLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK 230
C S+ + DVF +S+V+ YAKCG++ AR+ D+ P +
Sbjct: 140 ------------CLSMKTGYDA-------DVFVGSSLVDMYAKCGEIVYARKMFDEMPQR 180
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
NVV+WS M+ GY+Q + +E+L LF E + + +++ SV+S C + L LG IH
Sbjct: 181 NVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIH 240
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
I+ S + ++++ +Y+KCG E A +VFN + +NL WN+M+ YA +
Sbjct: 241 G-LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHT 299
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSC 410
++ + +F +M+ G KP+ ITF+N+L ACSH GL+ EG+ YF M+ + I+P +HY+
Sbjct: 300 QKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYAS 358
Query: 411 MIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPED 470
++D+LGR G L+EA E+IT+MP+ P E+ WGALL +C +H N ELA +A + L P
Sbjct: 359 LVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVS 418
Query: 471 SGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQS 530
SG+++ L+N A + ++ D + R L+RD+G KK G S VE + F + H +S
Sbjct: 419 SGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKS 478
Query: 531 EEIYKVLDEIFLSSELEDYDTD 552
+EIY+ L E+ E Y D
Sbjct: 479 KEIYEKLAELGEEMEKAGYIAD 500
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 152/313 (48%), Gaps = 32/313 (10%)
Query: 15 PNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNG 74
P ++ + +M+ + D A K+C LS G SVHC+ K G+D+++ V +
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 75 LIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPN 134
L+ YA G + +AR++FDE ++VVTW+ M GYA +E A+ LF L ++ N
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 135 EVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFD 194
+ + +V+S C+ +E+GR++H K + S + ++L+ +Y KCG A ++F+
Sbjct: 217 DYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFN 276
Query: 195 RMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKL 254
+ +++ W +AML Y+Q++ ++ ++L
Sbjct: 277 EVPVKNLGIW-------------------------------NAMLKAYAQHSHTQKVIEL 305
Query: 255 FHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYA 314
F M +G+ P ++VL+AC ++ G + + E + P+ +++DM
Sbjct: 306 FKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQ-MKESRIEPTDKHYASLVDMLG 364
Query: 315 KCGSIEAAAEVFN 327
+ G ++ A EV
Sbjct: 365 RAGRLQEALEVIT 377
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 256/468 (54%), Gaps = 32/468 (6%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
+ +AR +F+ S D+V + +M GY+ LF +L + P+ T ++L A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
C+ +E GR++H L++ L D +V+
Sbjct: 139 CAVAKALEEGRQLH----------CLSMKLGLDD---------------------NVYVC 167
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
+++N Y +C D+++AR D+ VV ++AM+ GY++ N+P E+L LF EM G +
Sbjct: 168 PTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK 227
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAE 324
P E L+SVLS+C L L+LG WIH+ + + V + A++DM+AKCGS++ A
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHK-YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 325 VFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
+F + ++ +W++MI YA +G+A++++ +F++MR +PD+ITF+ LL ACSH G
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGR 346
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALL 444
+ EG++YF M +GI P +HY M+DLL R G L++AYE I +P+ P W LL
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 445 NACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKK 504
AC H N++LA + + LD G YV+L+N+ A +KW V +R +M+D+ K
Sbjct: 407 AACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVK 466
Query: 505 IPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
+PG S +EV+ EF D + ++++ LDE+ +L Y D
Sbjct: 467 VPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPD 514
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 187/385 (48%), Gaps = 48/385 (12%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
++N+M RGY + NP FS F+ +L + D +F LKAC EG +HC+
Sbjct: 96 IFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLS 155
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
KLG D + V LI+ Y + + AR VFD VV + M GYA RN A+
Sbjct: 156 MKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEAL 215
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
LF M ++PNE+TL++VLS+C+ +G +++G+ +H+ +K + + ++ AL+DM+
Sbjct: 216 SLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMF 275
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCGSL A +F++M +D +W++M+ YA G
Sbjct: 276 AKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG------------------------- 310
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
K ++S+ +F M V P+E + +L+AC + G V + G+
Sbjct: 311 ------KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFN--AISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
PS+ +++D+ ++ G++E A E + IS ++ W ++A +++ A V +
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPML-WRILLAACSSHNNLDLAEKVSE 423
Query: 359 QMRCMGFKPDDITFVNLLTACSHGG 383
++ F+ DD SHGG
Sbjct: 424 RI----FELDD----------SHGG 434
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 170/352 (48%), Gaps = 17/352 (4%)
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFD------RMETRDVFSWTSMVNGYA 212
E K + ++N N +L + KC SL REL + DV ++N
Sbjct: 16 ETFTKHSKIDTVNTQNPIL-LISKCNSL---RELMQIQAYAIKSHIEDVSFVAKLINFCT 71
Query: 213 KC---GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
+ + AR + ++V +++M GYS+ P E LF E++ G++P+ +
Sbjct: 72 ESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYT 131
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
S+L AC L G +H ++ G+ +V + +++MY +C +++A VF+ I
Sbjct: 132 FPSLLKACAVAKALEEGRQLHC-LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI 190
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
E +V +N+MI GYA + +A+++F +M+ KP++IT +++L++C+ G + G+
Sbjct: 191 VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGK 250
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRM 449
+ + + + + + +ID+ + G L +A + M + + AW A++ A
Sbjct: 251 -WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ-AWSAMIVAYAN 308
Query: 450 HGNVELARLSACNLLSLDPEDSGIYVL-LANICANERKWGDVKRVRSLMRDK 500
HG E + L + S + + I L L N C++ + + ++ S M K
Sbjct: 309 HGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 285/539 (52%), Gaps = 18/539 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN ++ GY K R A + F M E + S+ +K + E ES+ +
Sbjct: 82 WNGLVSGYIKNRMIVEARNVFELM----PERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ S ++ GLI D G + AR+++D +KDVV T M G + A
Sbjct: 138 ERNEVSWTVMFGGLI----DDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARL 193
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F+ M E N VT +++ Q +++ R++ E M +K ++ + LL Y
Sbjct: 194 IFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT---EVSWTSMLLG-YT 245
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
G + A E F+ M + V + +M+ G+ + G++ ARR D ++ +W M+
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y + E+L LF +M GV P +L+S+LS C L+ L G +H H V
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV-RCQFDD 364
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
V +A+ ++ MY KCG + A VF+ S ++++ WNS+I+GYA++G ++A+ +F +M
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G P+ +T + +LTACS+ G + EG E F +ME + + P EHYSC +D+LGR G +
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
+A ELI SM ++P WGALL AC+ H ++LA ++A L +P+++G YVLL++I
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSIN 544
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVAD-ESHPQSEEIYKVLDE 539
A+ KWGDV VR MR V K PG S +EV + F ++HP+ I +L++
Sbjct: 545 ASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEK 603
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 44/337 (13%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDV----------- 131
G + AR+ FD K + +W ++ GY S + A +LF+ M +V
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 132 ----------------EPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
E N V+ A++ Q G + + M ++N +
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGG 150
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
L+D G + AR+L+D M +DV + T+M+ G + G ++ AR D+ +NVV+W
Sbjct: 151 LID----DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTW 206
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH--QHF 293
+ M+ GY QNN+ + KLF V+PE+ + +S L L I + F
Sbjct: 207 TTMITGYRQNNRVDVARKLFE------VMPEK----TEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
M P V NA++ + + G I A VF+ + +R+ +W MI Y G +A
Sbjct: 257 FEVMPMKP-VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEA 315
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
+++F QM+ G +P + +++L+ C+ + G++
Sbjct: 316 LDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 27/312 (8%)
Query: 142 LSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDV 201
+S S++G I R+ ++++ K ++ N+++ Y G AR+LFD M R+V
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFK----AIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV 79
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
SW +V+GY K + AR + P +NVVSW+AM+ GY Q E+ LF M
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM--- 136
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
PE + VS G L ++ G + + V + ++ + G ++
Sbjct: 137 ---PERNE-VSWTVMFGGL--IDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDE 190
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
A +F+ + ERN+V+W +MI GY N + A +F+ M + ++++ ++L +
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTL 246
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSC--MIDLLGRTGLLKEAYELITSMPMQPCEAA 439
G I + +E+F M P + +C MI G G + +A + M + A
Sbjct: 247 SGRIEDAEEFFEVM-------PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD-NAT 298
Query: 440 WGALLNACRMHG 451
W ++ A G
Sbjct: 299 WRGMIKAYERKG 310
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 294/542 (54%), Gaps = 35/542 (6%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFEGESVHCV 59
+WNTMI Y + + FL + + + D +++ A A L G H
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V K + +++ N L+ Y+ G + + VF +DVV+W TM + +
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ L M + + + +T+ A+LSA S + + E+G++ H + ++ ++ +++ L+DM
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDM 462
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y K G + +++LF+ +GYA+ ++ +W++M+
Sbjct: 463 YSKSGLIRISQKLFEG-------------SGYAE----------------RDQATWNSMI 493
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+GY+QN +++ +F +M+ + P + S+L AC Q+ ++LG +H F I + +
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH-GFSIRQYL 552
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+V +A+A++DMY+K G+I+ A ++F+ ERN V++ +MI GY +G ++A+++F
Sbjct: 553 DQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLS 612
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M+ G KPD ITFV +L+ACS+ GLI EG + F M Y I+P EHY C+ D+LGR G
Sbjct: 613 MQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVG 672
Query: 420 LLKEAYELITSMPMQPCEAA-WGALLNACRMHGNVELARLSACNLLSLDPED--SGIYVL 476
+ EAYE + + + A WG+LL +C++HG +ELA + L D SG VL
Sbjct: 673 RVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVL 732
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKV 536
L+N+ A E+KW V +VR MR+KG+KK G S +E+ G F+ D+ HP S EIY V
Sbjct: 733 LSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDV 792
Query: 537 LD 538
+D
Sbjct: 793 ID 794
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 234/464 (50%), Gaps = 42/464 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFA--LKACEELSGDFEGESVHC 58
+WNT+I G+ P+ A ++ RM + +C ++ ++ LKAC E G++VHC
Sbjct: 72 LWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHC 131
Query: 59 VVRKLGFDSELLVRNGLIHFYA------DRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
+ + +S +V N L++ Y D R+VFD K+VV W T+ Y
Sbjct: 132 HLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVK 191
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL 172
+ A F +M+R +V+P+ V+ + V A S + +++K N+ L L
Sbjct: 192 TGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS----------ISRSIKKANVFYGLML 241
Query: 173 HNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV 232
L D YVK D+F +S ++ YA+ GD+E++RR D +N+
Sbjct: 242 K--LGDEYVK-----------------DLFVVSSAISMYAELGDIESSRRVFDSCVERNI 282
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAG-VVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
W+ M+ Y QN+ ES++LF E +G+ +V +E + SA L + LG H
Sbjct: 283 EVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH- 341
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
FV + + + N+++ MY++CGS+ + VF ++ ER++VSWN+MI+ + NG
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
+ + + +M+ GFK D IT LL+A S+ G++ + R GI+ + + S +
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ-GIQFEGMN-SYL 459
Query: 412 IDLLGRTGLLKEAYELIT-SMPMQPCEAAWGALLNACRMHGNVE 454
ID+ ++GL++ + +L S + +A W ++++ +G+ E
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 142/322 (44%), Gaps = 20/322 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN+MI GY + + F F +ML + + + L AC ++ G+ +H
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ D + V + L+ Y+ G +K+A ++F ++ ++ VT+TTM GY E A+
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLDMY 180
LF M ++P+ +T +AVLSACS G I+ G ++ E M E N++ S + + DM
Sbjct: 609 LFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Query: 181 VKCGSLVAARELFDRM--ETRDVFSWTSMVNGYAKCGDLENA----RRFLDQTPHKNVVS 234
+ G + A E + E W S++ G+LE A R KN
Sbjct: 669 GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSG 728
Query: 235 WSAMLAG-YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
+ +L+ Y++ K K K+ M G+ E S + G ++C F
Sbjct: 729 YEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGR--SGIEIAGYVNC----------F 776
Query: 294 VIEKGMHPSVTLANAILDMYAK 315
V HP + ++D AK
Sbjct: 777 VSRDQEHPHSSEIYDVIDGLAK 798
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 174/380 (45%), Gaps = 55/380 (14%)
Query: 88 AREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPN--EVTLIAVLSAC 145
AR++FD V W T+ G+ N A+ ++ M + N T + L AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 146 SQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLV------AARELFDRMETR 199
++ +++ G+ VH ++ + S +HN+L++MYV C + R++FD M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 200 DVFSWTSMVNGYAKCG-DLENARRF---LDQTPHKNVVSWSAMLAGYSQNNKPKESLKLF 255
+V +W ++++ Y K G + E R+F + + VS+ + S + K++ +F
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA-NVF 236
Query: 256 HEMMGAGVVPEEHALVSVLSACGQLSCLNLG-HWIHQHFVIEKGMHPSVTLANAILDMYA 314
+ +M L LG ++ FV+ ++ + MYA
Sbjct: 237 YGLM-----------------------LKLGDEYVKDLFVV-----------SSAISMYA 262
Query: 315 KCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFK---PDDIT 371
+ G IE++ VF++ ERN+ WN+MI Y N +++ +F + +G K D++T
Sbjct: 263 ELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSDEVT 320
Query: 372 FVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
++ +A S + G+++ + +N+ P S M+ + R G + +++ + SM
Sbjct: 321 YLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSM 379
Query: 432 PMQPCEAAWGALLNACRMHG 451
+ +W +++A +G
Sbjct: 380 RERDV-VSWNTMISAFVQNG 398
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP--EEHALVS 272
G+ + AR+ D P V W+ ++ G+ NN P E+L + M + + S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 273 VLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGS------IEAAAEVF 326
L AC + L G +H H +I + S + N++++MY C + + +VF
Sbjct: 113 TLKACAETKNLKAGKAVHCH-LIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 327 NAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
+ + +N+V+WN++I+ Y G+ +A F M M KP ++FVN+ A S I
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 387 EGQEYFYTM 395
+ ++ M
Sbjct: 232 KANVFYGLM 240
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 274/477 (57%), Gaps = 10/477 (2%)
Query: 79 YADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTL 138
+ D +++A +VFDE DV++ T + + + A + F +L + PNE T
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 139 IAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET 198
V+ + + D+++G+++H K + ++ + +A+L+ YVK +L AR FD
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 199 RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM 258
+V S T++++GY K + E A P ++VV+W+A++ G+SQ + +E++ F +M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 259 MGAGVV-PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
+ GVV P E ++A ++ G IH + G +V + N+++ Y+KCG
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 318 SIEAAAEVFNAISE--RNLVSWNSMIAGYAANGQAKQAVNVFDQM-RCMGFKPDDITFVN 374
++E + FN + E RN+VSWNSMI GYA NG+ ++AV +F++M + +P+++T +
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 336
Query: 375 LLTACSHGGLISEGQEYFYTMERNYGIKP---KREHYSCMIDLLGRTGLLKEAYELITSM 431
+L AC+H GLI EG YF +Y P + EHY+CM+D+L R+G KEA ELI SM
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Query: 432 PMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVK 491
P+ P W ALL C++H N LA+L+A +L LDP D YV+L+N + W +V
Sbjct: 396 PLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVS 455
Query: 492 RVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELED 548
+R M++ G+K+ G S +EV + + F+ AD+++ +E+Y++L +S LE+
Sbjct: 456 LIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML--ALVSQHLEE 510
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 22/306 (7%)
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
G+ +HC K+G S + V + +++ Y L AR FD++ +VV+ T + GY
Sbjct: 112 GKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLK 171
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM--------EKK 164
++ E A+ LF M V VT AV+ SQ G E +M +
Sbjct: 172 KHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNES 227
Query: 165 NMRCSLN-LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRF 223
C++ + N K A + L R +VF W S+++ Y+KCG++E++
Sbjct: 228 TFPCAITAISNIASHGAGKSIHACAIKFLGKRF---NVFVWNSLISFYSKCGNMEDSLLA 284
Query: 224 LD--QTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM-GAGVVPEEHALVSVLSACGQL 280
+ + +N+VSW++M+ GY+ N + +E++ +F +M+ + P ++ VL AC
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344
Query: 281 SCLNLGHWIHQHFVIEKGMHPSVTLAN--AILDMYAKCGSIEAAAEVFNAIS-ERNLVSW 337
+ G+ V + + L + ++DM ++ G + A E+ ++ + + W
Sbjct: 345 GLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFW 404
Query: 338 NSMIAG 343
+++ G
Sbjct: 405 KALLGG 410
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRS-FVFALKACEELSGDFEGESVH-CV 59
WN +I G+ + A + F+ MLR V + S F A+ A ++ G+S+H C
Sbjct: 193 WNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACA 252
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFD--ESSLKDVVTWTTMFDGYASRNCSE 117
++ LG + V N LI FY+ G ++ + F+ E +++V+W +M GYA E
Sbjct: 253 IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGE 312
Query: 118 LAMELFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMG----RRVHENMEKKNMRCSLNL 172
A+ +F M++ ++ PN VT++ VL AC+ G I+ G + + + N+ L
Sbjct: 313 EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNL-LELEH 371
Query: 173 HNALLDMYVKCGSLVAARELFDRMETRD-VFSWTSMVNG 210
+ ++DM + G A EL M + W +++ G
Sbjct: 372 YACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG 410
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 281/543 (51%), Gaps = 38/543 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W+ ++ G+ + + S F M R + + +F LKAC L+ +G +H
Sbjct: 75 WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL 134
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K+GF+ + V N L+ Y+ G + A +VF + +++W M G+ A++
Sbjct: 135 KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALD 194
Query: 122 LFNLMLRGDVE--PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRC--SLNLHNALL 177
F +M +++ P+E TL ++L ACS G I G+++H + + C S + +L+
Sbjct: 195 TFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLV 254
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
D+YVK CG L +AR+ DQ K ++SWS+
Sbjct: 255 DLYVK-------------------------------CGYLFSARKAFDQIKEKTMISWSS 283
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV-IE 296
++ GY+Q + E++ LF + + AL S++ + L G + V +
Sbjct: 284 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 343
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
G+ SV N+++DMY KCG ++ A + F + ++++SW +I GY +G K++V +
Sbjct: 344 SGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRI 401
Query: 357 FDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG 416
F +M +PD++ ++ +L+ACSH G+I EG+E F + +GIKP+ EHY+C++DLLG
Sbjct: 402 FYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 461
Query: 417 RTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVL 476
R G LKEA LI +MP++P W LL+ CR+HG++EL + LL +D ++ YV+
Sbjct: 462 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVM 521
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKV 536
++N+ W + R L KG+KK G S VE++ E F ++SHP + I +
Sbjct: 522 MSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQET 581
Query: 537 LDE 539
L E
Sbjct: 582 LKE 584
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 192/421 (45%), Gaps = 38/421 (9%)
Query: 35 RSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE 94
++ V L+ C +G VHC + K G L+ N LI Y A +VFD
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 95 SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
++VV+W+ + G+ + ++ LF+ M R + PNE T L AC + +E G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
++H K + + N+L+DMY +KC
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMY-------------------------------SKC 155
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV--PEEHALVS 272
G + A + + ++++SW+AM+AG+ ++L F M A + P+E L S
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 273 VLSACGQLSCLNLGHWIHQHFVIEKGMH--PSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
+L AC + G IH F++ G H S T+ +++D+Y KCG + +A + F+ I
Sbjct: 216 LLKACSSTGMIYAGKQIHG-FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
E+ ++SW+S+I GYA G+ +A+ +F +++ + + D +++ + L+ +G++
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 391 YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMH 450
+ + + ++D+ + GL+ EA + M ++ +W ++ H
Sbjct: 335 -MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDV-ISWTVVITGYGKH 392
Query: 451 G 451
G
Sbjct: 393 G 393
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 43/319 (13%)
Query: 133 PNE-VTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARE 191
PN+ L+++L C++ G + G +VH + K +L N L+DMY KC + A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 192 LFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKES 251
+F D P +NVVSWSA+++G+ N K S
Sbjct: 63 VF-------------------------------DSMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 252 LKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILD 311
L LF EM G+ P E + L ACG L+ L G IH F ++ G V + N+++D
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG-FCLKIGFEMMVEVGNSLVD 150
Query: 312 MYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFK--PDD 369
MY+KCG I A +VF I +R+L+SWN+MIAG+ G +A++ F M+ K PD+
Sbjct: 151 MYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 370 ITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLL---KEAY 425
T +LL ACS G+I G++ + + + + ++DL + G L ++A+
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 426 ELITSMPMQPCEAAWGALL 444
+ I M +W +L+
Sbjct: 271 DQIKEKTM----ISWSSLI 285
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 270/516 (52%), Gaps = 44/516 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W +M+ GY + A F+ M+ ++ + + A+KAC EL G H VV
Sbjct: 131 WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVI 190
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
GF+ + + L + Y AR VFDE DV+ WT + ++ + E A+
Sbjct: 191 THGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALG 250
Query: 122 LFNLMLRGD-VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
LF M RG + P+ T VL+AC + ++ G+ +H + + ++ + ++LLDMY
Sbjct: 251 LFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMY 310
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCG + AR+ + KN VSWSA+L
Sbjct: 311 -------------------------------GKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALV---SVLSACGQLSCLNLGHWIHQHFVIEK 297
GY QN + ++++++F EM EE L +VL AC L+ + LG IH +V +
Sbjct: 340 GYCQNGEHEKAIEIFREM-------EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYV-RR 391
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
G +V + +A++D+Y K G I++A+ V++ +S RN+++WN+M++ A NG+ ++AV+ F
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
+ M G KPD I+F+ +LTAC H G++ EG+ YF M ++YGIKP EHYSCMIDLLGR
Sbjct: 452 NDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGR 511
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNV-ELARLSACNLLSLDPEDSGIYVL 476
GL +EA L+ + + WG LL C + + +A A ++ L+P+ YVL
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVL 571
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVE 512
L+N+ + GD +R LM +GV K G S ++
Sbjct: 572 LSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 224/476 (47%), Gaps = 63/476 (13%)
Query: 28 HRVEMDCRSFVFA--LKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRG-W 84
H E+ ++A L+ C ++ G H V K G +++ V N L+ Y G
Sbjct: 53 HSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG 112
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
++ R VFD +KD ++WT+M GY + A+E+F M+ ++ NE TL + + A
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
CS++G++ +GR H + + + + L +Y V AR +FD M DV W
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW 232
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM-MGAGV 263
T A+L+ +S+N+ +E+L LF+ M G G+
Sbjct: 233 T-------------------------------AVLSAFSKNDLYEEALGLFYAMHRGKGL 261
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
VP+ +VL+ACG L L G IH +I G+ +V + +++LDMY KCGS+ A
Sbjct: 262 VPDGSTFGTVLTACGNLRRLKQGKEIHGK-LITNGIGSNVVVESSLLDMYGKCGSVREAR 320
Query: 324 EVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGG 383
+VFN +S++N VSW++++ GY NG+ ++A+ +F +M + D F +L AC+
Sbjct: 321 QVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLA 376
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
+ G+E R G S +IDL G++G + A + + M ++ W A+
Sbjct: 377 AVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM-ITWNAM 434
Query: 444 LNACRMHGNVE---------------------LARLSACNLLSLDPEDSGIYVLLA 478
L+A +G E +A L+AC + E +VL+A
Sbjct: 435 LSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMA 490
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 249/459 (54%), Gaps = 38/459 (8%)
Query: 87 HAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRG---DVEPNEVTLIAVLS 143
+A +FD + + + TM + + L + F LM++ D+ P+ +T ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
AC + +G+++H + K + S D +V+ G L R+ D
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLS--------DGHVQTGVL--------RIYVEDKL- 167
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
L +AR+ D+ P +VV W ++ GY + E L++F EM+ G+
Sbjct: 168 -------------LFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI 214
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
P+E ++ + L+AC Q+ L G WIH+ ++ + V + A++DMYAKCG IE A
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 324 EVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM-RCMGFKPDDITFVNLLTACSHG 382
EVF ++ RN+ SW ++I GYAA G AK+A D++ R G KPD + + +L AC+HG
Sbjct: 275 EVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHG 334
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGA 442
G + EG+ ME YGI PK EHYSC++DL+ R G L +A +LI MPM+P + WGA
Sbjct: 335 GFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGA 394
Query: 443 LLNACRMHGNVELARLSACNLLSLDP----EDSGIYVLLANICANERKWGDVKRVRSLMR 498
LLN CR H NVEL L+ NLL L+ E+ V L+NI + ++ + +VR ++
Sbjct: 395 LLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIE 454
Query: 499 DKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
+G++K PG SL+EVDG +F+ D SHP +I+ ++
Sbjct: 455 QRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 36/349 (10%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFV---FALKACEELSGDFEGESVH 57
+++TMIR ++ P++ YFL M++ E S++ F + AC + G+ +H
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 58 CVVRKLG-FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
C V K G F S+ V+ G++ Y + L AR+VFDE DVV W + +GY
Sbjct: 140 CWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN-MRCSLNLHNA 175
+E+F ML +EP+E ++ L+AC+Q+G + G+ +HE ++KK + + + A
Sbjct: 200 SEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTA 259
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
L+DMY KCG + A E+F+++ R+VFSW +++ GYA G + A LD+ ++
Sbjct: 260 LVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED---- 315
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
G+ P+ L+ VL+AC L G + ++
Sbjct: 316 --------------------------GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS-WNSMIAG 343
G+ P + I+D+ + G ++ A ++ + + L S W +++ G
Sbjct: 350 RYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 280/535 (52%), Gaps = 35/535 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLR--HRVEMDCRSFVFALKACEELSGDFEGESVHCV 59
WNTM+ G+ + + F +ML V+ D + + A+ C S + +HC
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K F LV N + YA G L +A+ VF K V +W + G+A N L+
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
++ M + P+ T+ ++LSACS++ + +G+ VH + N L
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH----------GFIIRNWL--- 527
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
RD+F + S+++ Y CG+L + D K++VSW+ ++
Sbjct: 528 ------------------ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
GY QN P +L +F +M+ G+ +++ V AC L L LG H + ++ +
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA-YALKHLL 628
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+A +++DMYAK GSI +++VFN + E++ SWN+MI GY +G AK+A+ +F++
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M+ G PDD+TF+ +LTAC+H GLI EG Y M+ ++G+KP +HY+C+ID+LGR G
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 420 LLKEAYELIT-SMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
L +A ++ M + W +LL++CR+H N+E+ A L L+PE YVLL+
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 808
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEI 533
N+ A KW DV++VR M + ++K G S +E++ + F+V + EEI
Sbjct: 809 NLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 863
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 193/409 (47%), Gaps = 47/409 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEM-DCRSFVFALKACEELSGDFEGESVHCVV 60
WN +I Y + + F+ M+ + D ++ +KAC +S G +VH +V
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G ++ V N L+ FY G++ A ++FD +++V+W +M ++ SE +
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 121 ELFNLMLR----GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
L M+ G P+ TL+ VL C++ +I +G+ VH K + L L+NAL
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
+DMY KCG + A+ +F ++V SW +MV G++ GD L Q
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ---------- 383
Query: 237 AMLAGYSQNNKPKESLKL------FHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
MLAG ++ K E L FHE S L + +L C +L
Sbjct: 384 -MLAG-GEDVKADEVTILNAVPVCFHE--------------SFLPSLKELHCYSL----K 423
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
Q FV + +ANA + YAKCGS+ A VF+ I + + SWN++I G+A +
Sbjct: 424 QEFVYNE------LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNY 399
+ +++ QM+ G PD T +LL+ACS + G+E + RN+
Sbjct: 478 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 165/358 (46%), Gaps = 45/358 (12%)
Query: 53 GESVHCVVR---KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDG 109
G +H +V +L D L R +I YA G +R VFD K++ W +
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTR--IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISS 160
Query: 110 YASRNCSELAMELFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRC 168
Y+ + +E F M+ D+ P+ T V+ AC+ M D+ +G VH + K +
Sbjct: 161 YSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE 220
Query: 169 SLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP 228
+ + NAL+ Y G + A +LFD M R++ SW SM+
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR------------------- 261
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMM---GAGV-VPEEHALVSVLSACGQLSCLN 284
+S N +ES L EMM G G +P+ LV+VL C + +
Sbjct: 262 ------------VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 285 LGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGY 344
LG +H + ++ + + L NA++DMY+KCG I A +F + +N+VSWN+M+ G+
Sbjct: 310 LGKGVHG-WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 345 AANGQAKQAVNVFDQMRCMG--FKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNY 399
+A G +V QM G K D++T +N + C H + +E + Y++++ +
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 36/254 (14%)
Query: 141 VLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRD 200
+L A + DIEMGR++H+ LV+ R+ D
Sbjct: 90 LLQASGKRKDIEMGRKIHQ--------------------------LVSGST---RLRNDD 120
Query: 201 VFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
V T ++ YA CG +++R D KN+ W+A+++ YS+N E L+ F EM+
Sbjct: 121 VLC-TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 179
Query: 261 -AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI 319
++P+ V+ AC +S + +G +H V++ G+ V + NA++ Y G +
Sbjct: 180 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHG-LVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 320 EAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR----CMGFKPDDITFVNL 375
A ++F+ + ERNLVSWNSMI ++ NG ++++ + +M F PD T V +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 376 LTACSHGGLISEGQ 389
L C+ I G+
Sbjct: 299 LPVCAREREIGLGK 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 8/231 (3%)
Query: 269 ALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
AL +L A G+ + +G IHQ + L I+ MYA CGS + + VF+A
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 329 ISERNLVSWNSMIAGYAANGQAKQAVNVFDQM-RCMGFKPDDITFVNLLTACSHGGLISE 387
+ +NL WN++I+ Y+ N + + F +M PD T+ ++ AC+ +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
G + + G+ + ++ G G + +A +L MP + +W +++
Sbjct: 206 GLA-VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL-VSWNSMIRVF 263
Query: 448 RMHGNVELARLSACNLLSLDPE-----DSGIYVLLANICANERKWGDVKRV 493
+G E + L ++ + + D V + +CA ER+ G K V
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 284/554 (51%), Gaps = 47/554 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMD--CRSFVFALKA----CEELS---GDFE 52
+ +I G + A F M V++D C S + ++ A C+ LS G+
Sbjct: 208 YTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNEL 267
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
G+ +HC+ +LGF +L + N L+ YA + A +F E +VV+W M G+
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHEN------------ 160
S+ ++E M +PNEVT I+VL AC + GD+E GRR+ +
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAM 387
Query: 161 -------------------MEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDV 201
M+ +N++ + +L + L +++ + ++
Sbjct: 388 LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEI 447
Query: 202 FSWTSMVNG----YAKCGDLENARRFLDQTPHK-NVVSWSAMLAGYSQNNKPKESLKLFH 256
+ +V+G Y++C +E + D ++ ++ W++M++G+ N ++L LF
Sbjct: 448 SKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFR 507
Query: 257 EMMGAGVV-PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAK 315
M V+ P E + +VLS+C +L L G H V++ G + A+ DMY K
Sbjct: 508 RMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHG-LVVKSGYVSDSFVETALTDMYCK 566
Query: 316 CGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNL 375
CG I++A + F+A+ +N V WN MI GY NG+ +AV ++ +M G KPD ITFV++
Sbjct: 567 CGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSV 626
Query: 376 LTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQP 435
LTACSH GL+ G E +M+R +GI+P+ +HY C++D LGR G L++A +L + P +
Sbjct: 627 LTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKS 686
Query: 436 CEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRS 495
W LL++CR+HG+V LAR A L+ LDP+ S YVLL+N ++ R+W D ++
Sbjct: 687 SSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQG 746
Query: 496 LMRDKGVKKIPGHS 509
LM V K PG S
Sbjct: 747 LMNKNRVHKTPGQS 760
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 198/437 (45%), Gaps = 48/437 (10%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI + A + RM+ + L AC ++ G H V
Sbjct: 106 WNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAV 165
Query: 62 KLGFDSELLVRNGLIHFYADRGWL-KHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G D + V N L+ YA G++ + VF+ S + V++T + G A N A+
Sbjct: 166 KTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAV 225
Query: 121 ELFNLMLRGDVEPNEVTLIAVLS------ACSQMGDI---EMGRRVHENMEKKNMRCSLN 171
++F LM V+ + V L +LS C + +I E+G+++H + L+
Sbjct: 226 QMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLH 285
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYA------------------- 212
L+N+LL++Y K + A +F M +V SW M+ G+
Sbjct: 286 LNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSG 345
Query: 213 ----------------KCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFH 256
+ GD+E RR P +V +W+AML+GYS +E++ F
Sbjct: 346 FQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
+M + P++ L +LS+C +L L G IH VI + + + + ++ +Y++C
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHG-VVIRTEISKNSHIVSGLIAVYSEC 464
Query: 317 GSIEAAAEVF-NAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM-RCMGFKPDDITFVN 374
+E + +F + I+E ++ WNSMI+G+ N +A+ +F +M + P++ +F
Sbjct: 465 EKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFAT 524
Query: 375 LLTACSHGGLISEGQEY 391
+L++CS + G+++
Sbjct: 525 VLSSCSRLCSLLHGRQF 541
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 193/440 (43%), Gaps = 79/440 (17%)
Query: 51 FEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTT----- 105
G+ +H + ++G S+ + N L+ Y + G +AR+VFDE S++DV +W
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 106 -----------MFDGYASRNC---------------SELAMELFNLMLRGDVEPNEVTLI 139
+FDG R+ E A+ ++ M+ P+ TL
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 140 AVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR 199
+VLSACS++ D G R H K + ++ + NALL MY KCG +V
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV------------ 190
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM 259
+ R + N VS++A++ G ++ NK E++++F M
Sbjct: 191 ------------------DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMC 232
Query: 260 GAGVVPEEHALVSVLS------ACGQLSCL---NLGHWIHQHFVIEKGMHPSVTLANAIL 310
GV + L ++LS C LS + LG IH + G + L N++L
Sbjct: 233 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH-CLALRLGFGGDLHLNNSLL 291
Query: 311 DMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
++YAK + A +F + E N+VSWN MI G+ ++ ++V +MR GF+P+++
Sbjct: 292 EIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEV 351
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITS 430
T +++L AC G + G+ F ++ +P ++ M+ +EA
Sbjct: 352 TCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 431 MPMQ---PCEAAWGALLNAC 447
M Q P + +L++C
Sbjct: 407 MQFQNLKPDKTTLSVILSSC 426
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 269/490 (54%), Gaps = 40/490 (8%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
H +V G LL + LI + + +F L D + ++ +
Sbjct: 31 HLIVTGYGRSRSLLTK--LITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLP 88
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
+ + ML +V P+ T +V+ +C+ + + +G+ VH
Sbjct: 89 LHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVH------------------ 130
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
C ++V+ L D + ++V Y+KCGD+E AR+ D+ P K++V+W+
Sbjct: 131 ------CHAVVSGFGL-------DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
++++G+ QN E++++F++M +G P+ VS+LSAC Q ++LG W+HQ ++I
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQ-YIIS 236
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
+G+ +V L A++++Y++CG + A EVF+ + E N+ +W +MI+ Y +G +QAV +
Sbjct: 237 EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVEL 296
Query: 357 FDQMR--CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
F++M C G P+++TFV +L+AC+H GL+ EG+ + M ++Y + P EH+ CM+D+
Sbjct: 297 FNKMEDDC-GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDM 355
Query: 415 LGRTGLLKEAYELITSMPMQ---PCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDS 471
LGR G L EAY+ I + A W A+L AC+MH N +L A L++L+P++
Sbjct: 356 LGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNP 415
Query: 472 GIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSE 531
G +V+L+NI A K +V +R M ++K G+S++EV+ + F + DESH ++
Sbjct: 416 GHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETG 475
Query: 532 EIYKVLDEIF 541
EIY+ L+ +
Sbjct: 476 EIYRYLETLI 485
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 177/374 (47%), Gaps = 38/374 (10%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
++N++I+ K R P +Y+ RML V +F +K+C +LS G+ VHC
Sbjct: 74 LFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHA 133
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
GF + V+ L+ FY+ G ++ AR+VFD K +V W ++ G+ ++ A+
Sbjct: 134 VVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAI 193
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
++F M EP+ T +++LSAC+Q G + +G VH+ + + + ++ L AL+++Y
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+CG + ARE+FD+M+ +V +WT+M++ Y
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGT--------------------------H 287
Query: 241 GYSQNNKPKESLKLFHEMM-GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
GY Q ++++LF++M G +P V+VLSAC + G +++ +
Sbjct: 288 GYGQ-----QAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRL 342
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS----WNSMIAGYAANGQAKQAVN 355
P V ++DM + G ++ A + + + + W +M+ + V
Sbjct: 343 IPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVE 402
Query: 356 VFDQMRCMGFKPDD 369
+ R + +PD+
Sbjct: 403 I--AKRLIALEPDN 414
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 248/441 (56%), Gaps = 4/441 (0%)
Query: 75 LIHFYADRGWLK---HAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDV 131
L HF + G L +A VF +V+ + M Y+ ++ F+ M +
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 132 EPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARE 191
+E T +L +CS + D+ G+ VH + + + ++++Y G + A++
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 192 LFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKES 251
+FD M R+V W M+ G+ GD+E Q +++VSW++M++ S+ + +E+
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 252 LKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILD 311
L+LF EM+ G P+E +V+VL L L+ G WIH +T+ NA++D
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 312 MYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG-FKPDDI 370
Y K G +EAA +F + RN+VSWN++I+G A NG+ + +++FD M G P++
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITS 430
TF+ +L CS+ G + G+E F M + ++ + EHY M+DL+ R+G + EA++ + +
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKN 398
Query: 431 MPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDV 490
MP+ A WG+LL+ACR HG+V+LA ++A L+ ++P +SG YVLL+N+ A E +W DV
Sbjct: 399 MPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDV 458
Query: 491 KRVRSLMRDKGVKKIPGHSLV 511
++VR+LM+ ++K G S +
Sbjct: 459 EKVRTLMKKNRLRKSTGQSTI 479
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 158/387 (40%), Gaps = 65/387 (16%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
++N MI+ Y P + S+F M + D ++ LK+C LS G+ VH +
Sbjct: 69 VFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGEL 128
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL-- 118
+ GF +R G++ Y G + A++VFDE S ++VV W M G+ E
Sbjct: 129 IRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGL 188
Query: 119 -----------------------------AMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
A+ELF M+ +P+E T++ VL + +G
Sbjct: 189 HLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLG 248
Query: 150 DIEMGRRVHENMEKKNM-RCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV 208
++ G+ +H E + + + + NAL+D Y K G L AA +F +M+ R+V SW +++
Sbjct: 249 VLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLI 308
Query: 209 NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG-VVPEE 267
+G A N K + + LF M+ G V P E
Sbjct: 309 SGSA-------------------------------VNGKGEFGIDLFDAMIEEGKVAPNE 337
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF- 326
+ VL+ C + G + + + A++D+ ++ G I A +
Sbjct: 338 ATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLK 397
Query: 327 NAISERNLVSWNSMIAGYAANGQAKQA 353
N N W S+++ ++G K A
Sbjct: 398 NMPVNANAAMWGSLLSACRSHGDVKLA 424
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 247/459 (53%), Gaps = 38/459 (8%)
Query: 87 HAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRG---DVEPNEVTLIAVLS 143
+A +FD + + + TM + + L + F LM++ D+ P+ +T ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
AC + +G+++H + K + S D +V+ G L R+ D
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLS--------DSHVQTGVL--------RIYVEDKL- 167
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
L +AR+ D+ P +VV W ++ GY + E L++F EM+ G+
Sbjct: 168 -------------LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGL 214
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
P+E ++ + L+AC Q+ L G WIH+ + + V + A++DMYAKCG IE A
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 324 EVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM-RCMGFKPDDITFVNLLTACSHG 382
EVF ++ RN+ SW ++I GYAA G AK+A+ +++ R G KPD + + +L AC+HG
Sbjct: 275 EVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHG 334
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGA 442
G + EG+ ME Y I PK EHYSC++DL+ R G L +A LI MPM+P + WGA
Sbjct: 335 GFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGA 394
Query: 443 LLNACRMHGNVELARLSACNLLSLDP----EDSGIYVLLANICANERKWGDVKRVRSLMR 498
LLN CR H NVEL L+ NLL L+ E+ V L+NI + ++ + +VR ++
Sbjct: 395 LLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIE 454
Query: 499 DKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
+GV+K PG S++EVDG +F+ D SHP +I+ V+
Sbjct: 455 QRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 170/349 (48%), Gaps = 36/349 (10%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFV---FALKACEELSGDFEGESVH 57
+++TMIR ++ P++ YFL M++ E S++ F + AC + G+ +H
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 58 CVVRKLG-FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
C V K G F S+ V+ G++ Y + L AR+VFDE DVV W + +GY
Sbjct: 140 CWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN-MRCSLNLHNA 175
+E+F ML +EP+E ++ L+AC+Q+G + G+ +HE ++KK+ + + + A
Sbjct: 200 SEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTA 259
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
L+DMY KCG + A E+F ++ R+VFSW +++ GYA G + A L++ ++
Sbjct: 260 LVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED---- 315
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
G+ P+ L+ VL+AC L G + ++
Sbjct: 316 --------------------------GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS-WNSMIAG 343
+ P + I+D+ + G ++ A + + + L S W +++ G
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 182/528 (34%), Positives = 282/528 (53%), Gaps = 30/528 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI GY K R A F +M R + + + C+ + E +S + R
Sbjct: 139 WNTMISGYAKNRRIGEALLLFEKM-PERNAVSWSAMITGF--CQ----NGEVDSAVVLFR 191
Query: 62 KLGF-DSELL--VRNGLI--HFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
K+ DS L + GLI ++ W+ V + T+ GY R
Sbjct: 192 KMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQV 251
Query: 117 ELAMELFNLM--LRGDVEPNE---------VTLIAVLSACSQMGDIEMGRRVHENMEKKN 165
E A LF+ + L GD E V+ +++ A ++GD+ R + + M+ ++
Sbjct: 252 EAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD 311
Query: 166 MRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLD 225
N ++D YV + A LF M RD SW MV+GYA G++E AR + +
Sbjct: 312 TIS----WNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFE 367
Query: 226 QTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL 285
+TP K+ VSW++++A Y +N KE++ LF M G P+ H L S+LSA L L L
Sbjct: 368 KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRL 427
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGY 344
G +HQ ++ K + P V + NA++ MY++CG I + +F+ + +R +++WN+MI GY
Sbjct: 428 GMQMHQ--IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGY 485
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK 404
A +G A +A+N+F M+ G P ITFV++L AC+H GL+ E + F +M Y I+P+
Sbjct: 486 AFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQ 545
Query: 405 REHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLL 464
EHYS ++++ G +EA +ITSMP +P + WGALL+ACR++ NV LA ++A +
Sbjct: 546 MEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMS 605
Query: 465 SLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVE 512
L+PE S YVLL N+ A+ W + +VR M K +KK G S V+
Sbjct: 606 RLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 167/394 (42%), Gaps = 103/394 (26%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
G++ AR++F++ ++ VTW TM GY R A +LF++M + DV VT
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV----VTW---- 105
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGS---LVAARELFDRMETR 199
N ++ YV CG L AR+LFD M +R
Sbjct: 106 -------------------------------NTMISGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM 259
D FSW +M++GYAK + A ++ P +N VSWSAM+ G+ QN + ++ LF +M
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM- 193
Query: 260 GAGVVPEEHALVSVLSACGQLSCLNLGHWI-HQHFVIEKGMHPSVTLANAILDMYAKCGS 318
V + L ++++ + L+ W+ Q+ + G V N ++ Y + G
Sbjct: 194 ---PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ 250
Query: 319 IEAAAEVFNAISE---------------RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCM 363
+EAA +F+ I + +N+VSWNSMI Y G A +FDQM+
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK-- 308
Query: 364 GFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKE 423
D I+ ++ MID +++
Sbjct: 309 --DRDTIS------------------------------------WNTMIDGYVHVSRMED 330
Query: 424 AYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
A+ L + MP + +W +++ GNVELAR
Sbjct: 331 AFALFSEMPNRDAH-SWNMMVSGYASVGNVELAR 363
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 56/256 (21%)
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
N L+ ++ G + AR++F+++E R+ +W +M++GY K ++ AR+ D P ++VV
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 234 SWSAMLAGYSQNNKPK---ESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
+W+ M++GY + E+ KLF EM P + W
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEM------PSRDSF----------------SW-- 139
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
N ++ YAK I A +F + ERN VSW++MI G+ NG+
Sbjct: 140 ----------------NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEV 183
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLL----------TACSHGGLISEGQEYFY---TMER 397
AV +F +M P L+ +G L+S ++ Y T+
Sbjct: 184 DSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIV 243
Query: 398 NYGIKPKREHYSCMID 413
YG + + E C+ D
Sbjct: 244 GYGQRGQVEAARCLFD 259
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/578 (29%), Positives = 289/578 (50%), Gaps = 43/578 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN ++ GY + A F M + VE + L A + G EG+ H +
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI 301
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G + + ++ L++FY G +++A VFD KDVVTW + GY + E A+
Sbjct: 302 VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+ LM ++ + VTL ++SA ++ ++++G+ V + + + L + ++DMY
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRF-----LDQTPHK------ 230
KCGS+V A+++FD +D+ W +++ YA+ G A R L+ P
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 231 ----------------------------NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
N++SW+ M+ G QN +E++ +M +G
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS-VTLANAILDMYAKCGSIEA 321
+ P ++ LSAC L+ L++G IH ++I H S V++ +++DMYAKCG I
Sbjct: 542 LRPNAFSITVALSACAHLASLHIGRTIH-GYIIRNLQHSSLVSIETSLVDMYAKCGDINK 600
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
A +VF + L N+MI+ YA G K+A+ ++ + +G KPD+IT N+L+AC+H
Sbjct: 601 AEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNH 660
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWG 441
G I++ E F + +KP EHY M+DLL G ++A LI MP +P
Sbjct: 661 AGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQ 720
Query: 442 ALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKG 501
+L+ +C EL + LL +PE+SG YV ++N A E W +V ++R +M+ KG
Sbjct: 721 SLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKG 780
Query: 502 VKKIPGHSLVEVDGE--FKEFLVADESHPQSEEIYKVL 537
+KK PG S +++ GE F+ D++H + EI +L
Sbjct: 781 LKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 222/479 (46%), Gaps = 45/479 (9%)
Query: 22 FLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYAD 81
F+ ML + + D KAC L G VH V K G + + V + L Y
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 82 RGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAV 141
G L A +VFDE ++ V W + GY +E A+ LF+ M + VEP VT+
Sbjct: 221 CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 142 LSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDV 201
LSA + MG +E G++ H M L +LL+ Y K G + A +FDRM +DV
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
+W +++GY + G +E+A ++ Q + + +
Sbjct: 341 VTWNLIISGYVQQGLVEDA-IYMCQLMRLEKLKYDCV----------------------- 376
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
L +++SA + L LG + Q + I + LA+ ++DMYAKCGSI
Sbjct: 377 -------TLATLMSAAARTENLKLGKEV-QCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
A +VF++ E++L+ WN+++A YA +G + +A+ +F M+ G P+ IT+ ++ +
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP---MQPCEA 438
G + E ++ F M+ + GI P ++ M++ + + G +EA + M ++P
Sbjct: 489 NGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 439 AWGALLNACRMHGNVELAR---------LSACNLLSLDPEDSGIYVLLANICANERKWG 488
+ L+AC ++ + R L +L+S++ +Y +I E+ +G
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 151/340 (44%), Gaps = 34/340 (10%)
Query: 53 GESVHCVVRKLG--FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGY 110
G+ +H + K G + + L+ FYA L+ A +F + +++V +W +
Sbjct: 89 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVK 148
Query: 111 ASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSL 170
E A+ F ML ++ P+ + V AC + GR VH + K + +
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 171 NLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK 230
+ ++L DMY KCG L A ++FD + R+ +W +++ GY
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV------------------ 250
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
QN K +E+++LF +M GV P + + LSA + + G H
Sbjct: 251 -------------QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
I GM L ++L+ Y K G IE A VF+ + E+++V+WN +I+GY G
Sbjct: 298 A-IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLV 356
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
+ A+ + MR K D +T L++A + + G+E
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 229/408 (56%), Gaps = 32/408 (7%)
Query: 103 WTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENME 162
W + Y A++++ M+R V P+ +L V+ A Q+ D +G+ +H
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS--- 141
Query: 163 KKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARR 222
VA R F D F + + Y K G+ ENAR+
Sbjct: 142 ------------------------VAVRLGF----VGDEFCESGFITLYCKAGEFENARK 173
Query: 223 FLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSC 282
D+ P + + SW+A++ G + + E++++F +M +G+ P++ +VSV ++CG L
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGD 233
Query: 283 LNLGHWIHQHFVIEKGMHPS-VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMI 341
L+L +H+ + K S + + N+++DMY KCG ++ A+ +F + +RN+VSW+SMI
Sbjct: 234 LSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMI 293
Query: 342 AGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGI 401
GYAANG +A+ F QMR G +P+ ITFV +L+AC HGGL+ EG+ YF M+ + +
Sbjct: 294 VGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFEL 353
Query: 402 KPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSAC 461
+P HY C++DLL R G LKEA +++ MPM+P WG L+ C G+VE+A A
Sbjct: 354 EPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAP 413
Query: 462 NLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHS 509
++ L+P + G+YV+LAN+ A W DV+RVR LM+ K V KIP +S
Sbjct: 414 YMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 167/356 (46%), Gaps = 34/356 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN ++R Y + +P A +L M+R V D S +KA ++ G+ +H V
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+LGF + +G I Y G ++AR+VFDE+ + + +W + G + A+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM--EKKNMRCSLNLHNALLD 178
E+F M R +EP++ T+++V ++C +GD+ + ++H+ + K + + + N+L+D
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY KCG + A +F+ M R+V SW+SM+ GYA
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYA-------------------------- 297
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
N E+L+ F +M GV P + V VLSAC + G E
Sbjct: 298 -----ANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFE 352
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAANGQAKQA 353
+ P ++ I+D+ ++ G ++ A +V + + N++ W ++ G G + A
Sbjct: 353 LEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 267/517 (51%), Gaps = 32/517 (6%)
Query: 36 SFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDES 95
+F ALKA L + VH + K + + V GL+ Y G + A +VF+E
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 96 SLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGR 155
DVV W+ M + A++LF M V PNE TL ++L+ C+ +G
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 156 RVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCG 215
++H + K + + NAL+D+Y AKC
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVY-------------------------------AKCE 397
Query: 216 DLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLS 275
++ A + + KN VSW+ ++ GY + ++ +F E + V E S L
Sbjct: 398 KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALG 457
Query: 276 ACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLV 335
AC L+ ++LG +H I+ V ++N+++DMYAKCG I+ A VFN + ++
Sbjct: 458 ACASLASMDLGVQVHG-LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVA 516
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM 395
SWN++I+GY+ +G +QA+ + D M+ KP+ +TF+ +L+ CS+ GLI +GQE F +M
Sbjct: 517 SWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Query: 396 ERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVEL 455
R++GI+P EHY+CM+ LLGR+G L +A +LI +P +P W A+L+A N E
Sbjct: 577 IRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEF 636
Query: 456 ARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDG 515
AR SA +L ++P+D YVL++N+ A ++W +V +R M++ GVKK PG S +E G
Sbjct: 637 ARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQG 696
Query: 516 EFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
+ F V HP + I +L+ + + + Y D
Sbjct: 697 DVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPD 733
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 197/449 (43%), Gaps = 40/449 (8%)
Query: 4 TMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKL 63
T+ +GY ++P + R+ R E++ F LK L +H + KL
Sbjct: 120 TLAQGY-ACQDP---IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKL 175
Query: 64 GFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELF 123
G+DS V LI+ Y+ G + AR VF+ KD+V W + Y E +++L
Sbjct: 176 GYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLL 235
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC 183
+ M PN T L A +G + + VH + K + LL +Y +
Sbjct: 236 SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL 295
Query: 184 GSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYS 243
G + A ++F+ M DV V WS M+A +
Sbjct: 296 GDMSDAFKVFNEMPKNDV-------------------------------VPWSFMIARFC 324
Query: 244 QNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSV 303
QN E++ LF M A VVP E L S+L+ C C LG +H V++ G +
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHG-LVVKVGFDLDI 383
Query: 304 TLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCM 363
++NA++D+YAKC ++ A ++F +S +N VSWN++I GY G+ +A ++F +
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443
Query: 364 GFKPDDITFVNLLTACSHGGLISEG-QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
++TF + L AC+ + G Q + ++ N K + +ID+ + G +K
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN--SLIDMYAKCGDIK 501
Query: 423 EAYELITSMPMQPCEAAWGALLNACRMHG 451
A + M A+W AL++ HG
Sbjct: 502 FAQSVFNEMETIDV-ASWNALISGYSTHG 529
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNT+I GY AFS F LR++V + +F AL AC L+ G VH +
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K ++ V N LI YA G +K A+ VF+E DV +W + GY++ A+
Sbjct: 477 KTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALR 536
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN-MRCSLNLHNALLDMY 180
+ ++M D +PN +T + VLS CS G I+ G+ E+M + + + L + ++ +
Sbjct: 537 ILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLL 596
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENARR 222
+ G L A +L + + V W +M++ + E ARR
Sbjct: 597 GRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARR 639
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 113/249 (45%), Gaps = 20/249 (8%)
Query: 191 ELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKE 250
++ + D+F+ ++N Y K G ++A D+ P +N VS+ + GY+ ++
Sbjct: 74 DILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQD 129
Query: 251 SLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAIL 310
+ L+ + G H S L L + W+H +++ G + + A++
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP-IVKLGYDSNAFVGAALI 188
Query: 311 DMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
+ Y+ CGS+++A VF I +++V W +++ Y NG + ++ + MR GF P++
Sbjct: 189 NAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248
Query: 371 TFVNLLTACSHGGLIS-----EGQ--EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKE 423
TF L A G GQ + Y ++ G+ ++ L + G + +
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG--------LLQLYTQLGDMSD 300
Query: 424 AYELITSMP 432
A+++ MP
Sbjct: 301 AFKVFNEMP 309
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/514 (32%), Positives = 272/514 (52%), Gaps = 35/514 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI + + A F M R V+ + ++ LK+C++L EG +H V
Sbjct: 81 WTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE 140
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K L+VR+ L+ YA G ++ AR FD +D+V+W M DGY + C++ +
Sbjct: 141 KGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFS 200
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF LML +P+ T ++L A + +E+ +H + +
Sbjct: 201 LFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELH-------------------GLAI 241
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K G F R S+VN Y KCG L NA + + T ++++S +A++ G
Sbjct: 242 KLG--------FGRSSAL----IRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 242 YSQ-NNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
+SQ NN ++ +F +M+ +E + S+L C ++ + +G IH + +
Sbjct: 290 FSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIR 349
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
V L N+++DMYAK G IE A F + E+++ SW S+IAGY +G ++A++++++M
Sbjct: 350 FDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
KP+D+TF++LL+ACSH G G + + TM +GI+ + EH SC+ID+L R+G
Sbjct: 410 EHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGY 469
Query: 421 LKEAYELITSMP--MQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
L+EAY LI S + + WGA L+ACR HGNV+L++++A LLS++P Y+ LA
Sbjct: 470 LEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLA 529
Query: 479 NICANERKWGDVKRVRSLMRDKG-VKKIPGHSLV 511
++ A W + R LM++ G K PG+SLV
Sbjct: 530 SVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 191/394 (48%), Gaps = 34/394 (8%)
Query: 64 GFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELF 123
GF S L +++ LI Y +G +KHAR++FD S +DVV+WT M ++ A+ LF
Sbjct: 42 GFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLF 101
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC 183
M R DV+ N+ T +VL +C +G ++ G ++H ++EK N +L + +ALL +Y +C
Sbjct: 102 KEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARC 161
Query: 184 GSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYS 243
G + AR FD M+ RD+ SW +M++ GY+
Sbjct: 162 GKMEEARLQFDSMKERDLVSWNAMID-------------------------------GYT 190
Query: 244 QNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSV 303
N S LF M+ G P+ S+L A + CL + +H I+ G S
Sbjct: 191 ANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG-LAIKLGFGRSS 249
Query: 304 TLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYA-ANGQAKQAVNVFDQMRC 362
L ++++ Y KCGS+ A ++ +R+L+S ++I G++ N A ++F M
Sbjct: 250 ALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIR 309
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
M K D++ ++L C+ ++ G++ ++ I+ + +ID+ ++G ++
Sbjct: 310 MKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIE 369
Query: 423 EAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
+A M + +W +L+ HGN E A
Sbjct: 370 DAVLAFEEMKEKDVR-SWTSLIAGYGRHGNFEKA 402
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 273/540 (50%), Gaps = 35/540 (6%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKA-CEELSGDFEGESVHCVVR 61
TMI Y + + A F ML + + LK+ + DF G +H V
Sbjct: 153 TTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDF-GRQIHAHVI 211
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ G S + G+++ Y GWL A+ VFD+ ++K V T + GY + A++
Sbjct: 212 RAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALK 271
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF ++ VE + VL AC+ + ++ +G+++H + K + +++ L+D Y+
Sbjct: 272 LFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYI 331
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K C E+A R + N VSWSA+++G
Sbjct: 332 K-------------------------------CSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 242 YSQNNKPKESLKLFHEMMGAGV-VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
Y Q ++ +E++K F + + S+ AC L+ N+G +H I++ +
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD-AIKRSLI 419
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
S +A++ MY+KCG ++ A EVF ++ ++V+W + I+G+A G A +A+ +F++M
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
G KP+ +TF+ +LTACSH GL+ +G+ TM R Y + P +HY CMID+ R+GL
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
L EA + + +MP +P +W L+ C H N+EL ++ L LDPED+ YVL N+
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
KW + + LM ++ +KK S ++ G+ F+V D+ HPQ++EIY+ L E
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 207/461 (44%), Gaps = 47/461 (10%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N + K R N AF + M + V + S+ +AC EL G +H +R
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMEL 122
+ +L++N ++ Y + L+ A ++FDE S + V+ TTM YA + + A+ L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 123 FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK 182
F+ ML +P +L + ++ GR++H ++ + + + ++ +++MYVK
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
CG LV A+ +FD+M + + T + + GY
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGL-------------------------------MVGY 260
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
+Q + +++LKLF +++ GV + VL AC L LNLG IH V + G+
Sbjct: 261 TQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHA-CVAKLGLESE 319
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
V++ ++D Y KC S E+A F I E N VSW+++I+GY Q ++AV F +R
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 363 MGFKP-DDITFVNLLTACSH------GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLL 415
+ T+ ++ ACS GG + + YG S +I +
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG-------ESALITMY 432
Query: 416 GRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
+ G L +A E+ SM P AW A ++ +GN A
Sbjct: 433 SKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEA 472
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/490 (31%), Positives = 258/490 (52%), Gaps = 36/490 (7%)
Query: 87 HAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACS 146
++ +F S ++ + G E ++ F LMLR V+P+ +T VL + S
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 147 QMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDR----------- 195
++G +GR +H K + C + +L+DMY K G L A ++F+
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 196 ------------------------METRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
M R+ SW++++ GY G+L A++ + P KN
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN 257
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
VVSW+ ++ G+SQ + ++ + EM+ G+ P E+ + +VLSAC + L G IH
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHG 317
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
++++ G+ + A++DMYAKCG ++ AA VF+ ++ ++++SW +MI G+A +G+
Sbjct: 318 -YILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFH 376
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
QA+ F QM G KPD++ F+ +LTAC + + G +F +M +Y I+P +HY +
Sbjct: 377 QAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV 436
Query: 412 IDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDS 471
+DLLGR G L EA+EL+ +MP+ P W AL AC+ H A + NLL LDPE
Sbjct: 437 VDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELC 496
Query: 472 GIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSE 531
G Y+ L A++ DV++ R ++ + ++ G S +E+DG+ +F D SH ++
Sbjct: 497 GSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQ 556
Query: 532 EIYKVLDEIF 541
EI LDEI
Sbjct: 557 EIGLKLDEII 566
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 174/421 (41%), Gaps = 98/421 (23%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N +IRG + + +F+ MLR V+ D +F F LK+ +L + G ++H K
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRNCSEL 118
D + VR L+ YA G LKHA +VF+ES + ++ W + +GY +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 119 AMELFNLM-----------LRGDVEPNEV-------------------TLI--------- 139
A LF M ++G V+ E+ TLI
Sbjct: 215 ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY 274
Query: 140 -----------------------AVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
AVLSACS+ G + G R+H + ++ + AL
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
+DMY KCG L A +F M +D+ SWT+M+ G+A G RF
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHG------RF------------- 375
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
++++ F +MM +G P+E ++VL+AC S ++LG ++
Sbjct: 376 ------------HQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLD 423
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAE-VFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
+ P++ ++D+ + G + A E V N +L +W ++ A+ ++A +
Sbjct: 424 YAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAES 483
Query: 356 V 356
V
Sbjct: 484 V 484
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W T+I G+ + + A S + ML ++ + + L AC + G +H +
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G + + L+ YA G L A VF + KD+++WT M G+A A++
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQ 380
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENME-KKNMRCSLNLHNALLDMY 180
F M+ +P+EV +AVL+AC ++++G ++M + +L + ++D+
Sbjct: 381 CFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENARR 222
+ G L A EL + M D+ +W ++ Y C + RR
Sbjct: 441 GRAGKLNEAHELVENMPINPDLTTWAAL---YRACKAHKGYRR 480
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
KPK S + P+E +S++ AC + L H H I + S +A
Sbjct: 9 KPKSSPAKIYFPADRQASPDESHFISLIHACKDTASLR-----HVHAQILRRGVLSSRVA 63
Query: 307 NAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFK 366
++ + S + + +F ERN N++I G N + + +V F M +G K
Sbjct: 64 AQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVK 123
Query: 367 PDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYE 426
PD +TF +L + S G G+ +N+ + ++D+ +TG LK A++
Sbjct: 124 PDRLTFPFVLKSNSKLGFRWLGRALHAATLKNF-VDCDSFVRLSLVDMYAKTGQLKHAFQ 182
Query: 427 LITSMPMQPCEAA---WGALLNA-CR---MHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
+ P + + + W L+N CR MH L R S+ +SG + L
Sbjct: 183 VFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFR-------SMPERNSGSWSTLIK 235
Query: 480 ICANERKWGDVKRVRSLMRDKGV 502
+ + K++ LM +K V
Sbjct: 236 GYVDSGELNRAKQLFELMPEKNV 258
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 284/524 (54%), Gaps = 59/524 (11%)
Query: 38 VFAL-KACEELSGDFEGESVHCVVRKLGFDSE---LLVRNGLIHFYADRGWLKHAREVFD 93
+F+L + C ++S + + +H + + E L + ++ + + +A VFD
Sbjct: 51 IFSLAETCSDMS---QLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 94 ESSLKDVVTWTTMFDGYA---SRNCSELAMELFNLML-RGDVEPNEVTLIAVLSACSQMG 149
W T+ A SR E A L+ ML RG+ P++ T VL AC+ +
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRK--EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
G++VH C + H D+YV G +++
Sbjct: 166 GFSEGKQVH---------CQIVKHGFGGDVYVNNG----------------------LIH 194
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
Y CG L+ AR+ D+ P +++VSW++M+ + + +L+LF EM + P+ +
Sbjct: 195 LYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYT 253
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEK---GMHPSVTLANAILDMYAKCGSIEAAAEVF 326
+ SVLSAC L L+LG W H F++ K + V + N++++MY KCGS+ A +VF
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHA-FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVF 312
Query: 327 NAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM--RCMGFKPDDITFVNLLTACSHGGL 384
+ +R+L SWN+MI G+A +G+A++A+N FD+M + +P+ +TFV LL AC+H G
Sbjct: 313 QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGF 372
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALL 444
+++G++YF M R+Y I+P EHY C++DL+ R G + EA +++ SMPM+P W +LL
Sbjct: 373 VNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Query: 445 NACRMHG-NVELARLSACNLLSLDPED-------SGIYVLLANICANERKWGDVKRVRSL 496
+AC G +VEL+ A N++ ++ SG YVLL+ + A+ +W DV VR L
Sbjct: 433 DACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKL 492
Query: 497 MRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
M + G++K PG S +E++G EF D SHPQ+++IY+ L I
Sbjct: 493 MSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVI 536
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 170/356 (47%), Gaps = 36/356 (10%)
Query: 1 MWNTMIRG-YRKARNPNIAFSYFLRML-RHRVEMDCRSFVFALKACEELSGDFEGESVHC 58
MWNT+IR AF + +ML R D +F F LKAC + G EG+ VHC
Sbjct: 116 MWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHC 175
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
+ K GF ++ V NGLIH Y G L AR+VFDE + +V+W +M D +
Sbjct: 176 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS 235
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK---NMRCSLNLHNA 175
A++LF M R EP+ T+ +VLSAC+ +G + +G H + +K ++ + + N+
Sbjct: 236 ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 294
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
L++MY KCGSL A ++F M+ RD+ SW +M+ G+A G E A F D+ K
Sbjct: 295 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK----- 349
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
+E+++ P V +L AC +N G V
Sbjct: 350 -------------RENVR-----------PNSVTFVGLLIACNHRGFVNKGRQYFDMMVR 385
Query: 296 EKGMHPSVTLANAILDMYAKCGSI-EAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
+ + P++ I+D+ A+ G I EA V + + + V W S++ G +
Sbjct: 386 DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGAS 441
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 293/554 (52%), Gaps = 46/554 (8%)
Query: 2 WNTMIRGYRKARNPNI-AFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN+++ G + A F M+R VE+D SF + C + +H +
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 302
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G++S L V N L+ Y+ G L+ + VF + S ++VV+WTTM S N +
Sbjct: 303 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI----SSNKDDAVS 358
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
N+ G V PNEVT + +++A I+ G ++H K ++ N+ + +Y
Sbjct: 359 IFLNMRFDG-VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 417
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
AK LE+A++ + + ++SW+AM++
Sbjct: 418 -------------------------------AKFEALEDAKKAFEDITFREIISWNAMIS 446
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL--GHWIHQHFVIEKG 298
G++QN E+LK+F A +P E+ SVL+A +++ G H H +++ G
Sbjct: 447 GFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAH-LLKLG 504
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
++ +++A+LDMYAK G+I+ + +VFN +S++N W S+I+ Y+++G + +N+F
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFH 564
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M PD +TF+++LTAC+ G++ +G E F M Y ++P EHYSCM+D+LGR
Sbjct: 565 KMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRA 624
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G LKEA EL++ +P P E+ ++L +CR+HGNV++ A + + PE SG YV +
Sbjct: 625 GRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMY 684
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV-DGE----FKEFLVADESHPQSEEI 533
NI A + +W +R MR K V K G S ++V D E + F D+SHP+S+EI
Sbjct: 685 NIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEI 744
Query: 534 YKVLDEIFLSSELE 547
Y++++ I L LE
Sbjct: 745 YRMVEIIGLEMNLE 758
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 217/456 (47%), Gaps = 46/456 (10%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNT++ G+ + IA ++ +RM V D ++ AL C G G + V
Sbjct: 145 WNTILSGFD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL-AM 120
K G +S+L+V N I Y+ G + AR VFDE S KD+++W ++ G + A+
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+F M+R VE + V+ +V++ C D+++ R++H K+ L + N L+ Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCG L A + +F +M R+V SWT+M++
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVVSWTTMIS------------------------------- 350
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
+NK +++ +F M GV P E V +++A + G IH I+ G
Sbjct: 351 ----SNK-DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHG-LCIKTGFV 404
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
++ N+ + +YAK ++E A + F I+ R ++SWN+MI+G+A NG + +A+ +F
Sbjct: 405 SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 361 RCMGFKPDDITFVNLLTACSHGGLIS--EGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
P++ TF ++L A + IS +GQ + + G+ S ++D+ +
Sbjct: 465 AAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKR 522
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE 454
G + E+ ++ M Q + W ++++A HG+ E
Sbjct: 523 GNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFE 557
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 206/480 (42%), Gaps = 81/480 (16%)
Query: 16 NIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCVVRKLGFDSELLVRNG 74
N+ YF R MD + ALKAC GD + G +H GF S + V N
Sbjct: 66 NLQLGYFGR------HMDEVTLCLALKACR---GDLKRGCQIHGFSTTSGFTSFVCVSNA 116
Query: 75 LIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPN 134
++ Y G +A +F+ DVV+W T+ G+ + +++A+ M V +
Sbjct: 117 VMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFD 173
Query: 135 EVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFD 194
T LS C +G ++ + K + L + N+ + MY + GS AR +FD
Sbjct: 174 AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 233
Query: 195 RMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKL 254
M +D+ SW S+++G ++ G G+ E++ +
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTF-----------------------GF-------EAVVI 263
Query: 255 FHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYA 314
F +MM GV + + SV++ C + L L IH I++G + + N ++ Y+
Sbjct: 264 FRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHG-LCIKRGYESLLEVGNILMSRYS 322
Query: 315 KCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVN 374
KCG +EA VF+ +SERN+VSW +MI+ AV++F MR G P+++TFV
Sbjct: 323 KCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVG 377
Query: 375 LLTA----------------CSHGGLISE---GQEYFYTMERNYGIKPKREHY------- 408
L+ A C G +SE G + + ++ ++ +
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 409 ----SCMIDLLGRTGLLKEAYELITSMPMQ--PCEAAWGALLNACRMHGNVELARLSACN 462
+ MI + G EA ++ S + P E +G++LNA ++ + + C+
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCH 497
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 42/299 (14%)
Query: 88 AREVFDESSLKDVVTWTT-MFDGYASRNCSELAMELF--NLML-RGDVEPNEVTLIAVLS 143
A ++FD SS ++ T RN A+ +F NL L +EVTL L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
AC GD++ G ++H + + NA++ MY
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMY----------------------- 121
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
K G +NA + +VVSW+ +L+G+ N + +L M AGV
Sbjct: 122 --------RKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGV 170
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
V + + LS C LG + Q V++ G+ + + N+ + MY++ GS A
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQL-QSTVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 324 EVFNAISERNLVSWNSMIAGYAANGQ-AKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
VF+ +S ++++SWNS+++G + G +AV +F M G + D ++F +++T C H
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 16/239 (6%)
Query: 220 ARRFLDQTPHKN-VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP---EEHALVSVLS 275
A + D + +N S + ++ + N P +L +F E + G +E L L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 276 ACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLV 335
AC L G IH F G V ++NA++ MY K G + A +F + + ++V
Sbjct: 87 AC--RGDLKRGCQIHG-FSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTAC--SHGGLISEGQEYFY 393
SWN++++G+ N + A+N +M+ G D T+ L+ C S G L+ G +
Sbjct: 144 SWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL--GLQLQS 198
Query: 394 TMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
T+ + G++ + I + R+G + A + M + +W +LL+ G
Sbjct: 199 TVVKT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDM-ISWNSLLSGLSQEGT 255
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 280/513 (54%), Gaps = 12/513 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W ++R + R ++ M + + L+AC ++ +G+ +H
Sbjct: 72 WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQAL 131
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G + V+ GL+ Y+ G+++ A++ FD+ + K+ V+W ++ GY + A
Sbjct: 132 KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARR 191
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F+ + E + V+ ++S+ ++ GD+ + M K S N L+ YV
Sbjct: 192 VFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK----SPASWNILIGGYV 243
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
C + AR FD M ++ SW +M++GY K GD+++A K+ + + AM+A
Sbjct: 244 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 242 YSQNNKPKESLKLFHEMM--GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
Y+QN KPK++LKLF +M+ + + P+E L SV+SA QL + G W+ + ++ E G+
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESYITEHGI 362
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
L+ +++D+Y K G A ++F+ +++++ VS+++MI G NG A +A ++F
Sbjct: 363 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTA 422
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M P+ +TF LL+A SH GL+ EG + F +M +++ ++P +HY M+D+LGR G
Sbjct: 423 MIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAG 481
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLAN 479
L+EAYELI SMPMQP WGALL A +H NVE ++ + + L+ + +G LA
Sbjct: 482 RLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAM 541
Query: 480 ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVE 512
I ++ +W D + VR +++K + K G S VE
Sbjct: 542 IYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 202/424 (47%), Gaps = 31/424 (7%)
Query: 39 FALKACEELSGDFEGESVHC--VVRKLGFDSELLVRNGLIHFYAD--RGWLKHAREVFDE 94
F L+ C L + + VH VV + +LV L HF + R + + + +
Sbjct: 8 FFLQRCVVLE---QAKQVHAQLVVNRYNHLEPILVHQTL-HFTKEFSRNIVTYVKRILKG 63
Query: 95 SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
+ D +W + + + ++++ M + P+ + +VL AC +M ++ G
Sbjct: 64 FNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDG 123
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
+ +H K + + + L+ +Y + G + A++ FD + ++ SW S+++GY +
Sbjct: 124 KPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLES 183
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVL 274
G+L+ ARR D+ P K+ VSW+ +++ Y++ + LF M P + +
Sbjct: 184 GELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM------PLKSPASWNI 237
Query: 275 SACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAI-----LDMYAKCGSIEAAAEVFNAI 329
G ++C + + + ++ N + + Y K G +++A E+F +
Sbjct: 238 LIGGYVNC--------REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLM 289
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQM--RCMGFKPDDITFVNLLTACSHGGLISE 387
S+++ + +++MIA Y NG+ K A+ +F QM R +PD+IT ++++A S G S
Sbjct: 290 SKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSF 349
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
G + + +GIK + +IDL + G +A+++ +++ + ++ A++ C
Sbjct: 350 GT-WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDT-VSYSAMIMGC 407
Query: 448 RMHG 451
++G
Sbjct: 408 GING 411
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 182/624 (29%), Positives = 292/624 (46%), Gaps = 108/624 (17%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +I GY K+ + AF+ F M ++ + + L+ C L GE +H
Sbjct: 93 WNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE-SSLKDVVTWTTMFDGYASRNCSELAM 120
K GFD ++ V NGL+ YA + A +F+ K+ VTWT+M GY+ + A+
Sbjct: 153 KTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAI 212
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
E F + R + N+ T +VL+AC+ + +G +VH + K + ++ + +AL+DMY
Sbjct: 213 ECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMY 272
Query: 181 VKC-------------------------------GSLVAARELFDRMETRDV----FSWT 205
KC G + A +F RM RD+ F+
Sbjct: 273 AKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 206 SMVNG------------------------------------YAKCGDLENARRFLDQTPH 229
S++N YAK G +++A + +
Sbjct: 333 SILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
K+V+SW+A++ G + N E+LKLF M G+ P++ SVLSA +L+ L G +
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQ 349
H ++ I+ G S+++ N+++ MY KCGS+E A +FN++ R+L++W +I GYA N
Sbjct: 453 HGNY-IKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN-- 509
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYS 409
GL+ + Q YF +M YGI P EHY+
Sbjct: 510 ---------------------------------GLLEDAQRYFDSMRTVYGITPGPEHYA 536
Query: 410 CMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPE 469
CMIDL GR+G + +L+ M ++P W A+L A R HGN+E +A L+ L+P
Sbjct: 537 CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPN 596
Query: 470 DSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQ 529
++ YV L+N+ + + + VR LM+ + + K PG S VE G+ F+ D HP+
Sbjct: 597 NAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPR 656
Query: 530 SEEIYKVLDEIFLSSELEDYDTDI 553
EIY +DE+ L + Y D+
Sbjct: 657 MVEIYSKVDEMMLLIKEAGYFADM 680
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 143/279 (51%), Gaps = 4/279 (1%)
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
N LL K G + AR++FD+M RD F+W +M+ Y+ L +A + P KN +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
SW+A+++GY ++ E+ LF EM G+ P E+ L SVL C L L G IH H
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH- 150
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI-SERNLVSWNSMIAGYAANGQAKQ 352
I+ G V + N +L MYA+C I A +F + E+N V+W SM+ GY+ NG A +
Sbjct: 151 TIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFK 210
Query: 353 AVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
A+ F +R G + + TF ++LTAC+ G + + ++ G K S +I
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALI 269
Query: 413 DLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
D+ + ++ A L+ M + +W +++ C G
Sbjct: 270 DMYAKCREMESARALLEGMEVDDV-VSWNSMIVGCVRQG 307
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 180/392 (45%), Gaps = 34/392 (8%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE 132
N +I Y++ L A ++F + +K+ ++W + GY A LF M ++
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
PNE TL +VL C+ + + G ++H + K +N+ N LL MY +C + A L
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 193 FDRME-TRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKES 251
F+ ME ++ +WTSM L GYSQN ++
Sbjct: 183 FETMEGEKNNVTWTSM-------------------------------LTGYSQNGFAFKA 211
Query: 252 LKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILD 311
++ F ++ G ++ SVL+AC +S +G +H +++ G ++ + +A++D
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH-CCIVKSGFKTNIYVQSALID 270
Query: 312 MYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDIT 371
MYAKC +E+A + + ++VSWNSMI G G +A+++F +M K DD T
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 372 FVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
++L + + + + G + + ++D+ + G++ A ++ M
Sbjct: 331 IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Query: 432 PMQPCEAAWGALLNACRMHGNVELARLSACNL 463
++ +W AL+ +G+ + A CN+
Sbjct: 391 -IEKDVISWTALVTGNTHNGSYDEALKLFCNM 421
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 279/544 (51%), Gaps = 37/544 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN+MI G + A + M RH + + + +L +C L G+ +H
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYA--SRNCSELA 119
KLG D + V N L+ YA+ G+L R++F D V+W ++ A R+ E
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ N R + N +T +VLSA S + E+G+++H K N+ NAL+
Sbjct: 503 VCFLNAQ-RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIAC 561
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y KCG + ++F RM R ++ V+W++M+
Sbjct: 562 YGKCGEMDGCEKIFSRMAER------------------------------RDNVTWNSMI 591
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+GY N ++L L M+ G + +VLSA ++ L G +H + +
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA-CSVRACL 650
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V + +A++DMY+KCG ++ A FN + RN SWNSMI+GYA +GQ ++A+ +F+
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 360 MRCMG-FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M+ G PD +TFV +L+ACSH GL+ EG ++F +M +YG+ P+ EH+SCM D+LGR
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNA-CRMHG-NVELARLSACNLLSLDPEDSGIYVL 476
G L + + I MPM+P W +L A CR +G EL + +A L L+PE++ YVL
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 830
Query: 477 LANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKV 536
L N+ A +W D+ + R M+D VKK G+S V + F+ D+SHP ++ IYK
Sbjct: 831 LGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKK 890
Query: 537 LDEI 540
L E+
Sbjct: 891 LKEL 894
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 207/456 (45%), Gaps = 46/456 (10%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELS--GDFEGESVHCV 59
W ++ GY + A + M++ + + +FV L+AC+E+ G G +H +
Sbjct: 70 WACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129
Query: 60 VRKLGFDSELLVRNGLIHFYAD-RGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
+ KL + + +V N LI Y G + +A F + +K+ V+W ++ Y+
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189
Query: 119 AMELFNLMLRGDVEPNEVTLIA-VLSACSQM-GDIEMGRRVHENMEKKNMRCSLNLHNAL 176
A +F+ M P E T + V +ACS D+ + ++ ++K + L + + L
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL 249
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
+ + K GSL AR++F++METR N V+ +
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETR-------------------------------NAVTLN 278
Query: 237 AMLAGYSQNNKPKESLKLFHEMMG-AGVVPEEHALVSVLSACGQLSC-----LNLGHWIH 290
++ G + +E+ KLF +M V PE + + +LS+ + S L G +H
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVH 336
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
H + + V + N +++MYAKCGSI A VF +++++ VSWNSMI G NG
Sbjct: 337 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSC 410
+AV + MR P T ++ L++C+ GQ+ + GI +
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ-IHGESLKLGIDLNVSVSNA 455
Query: 411 MIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
++ L TG L E ++ +SMP + +W +++ A
Sbjct: 456 LMTLYAETGYLNECRKIFSSMPEHD-QVSWNSIIGA 490
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 44/381 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSF-VFALKACEELSGDFEG-ESVHCV 59
WN++I Y +A + AF F M +F AC D E + C
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
++K G ++L V +GL+ +A G L +AR+VF++ ++ VT + G + E A
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293
Query: 120 MELF---NLMLRGDVEPNE-VTLIAVLSACSQMGDIEM--GRRVHENMEKKNM-RCSLNL 172
+LF N M+ DV P V L++ S ++ + GR VH ++ + + +
Sbjct: 294 TKLFMDMNSMI--DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGI 351
Query: 173 HNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV 232
N L++MY KCGS+ AR +F M +D SW SM+ G LD
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG-------------LD------- 391
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
QN E+++ + M ++P L+S LS+C L LG IH
Sbjct: 392 -----------QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA-K 351
++ G+ +V+++NA++ +YA+ G + ++F+++ E + VSWNS+I A + ++
Sbjct: 441 -SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP 499
Query: 352 QAVNVFDQMRCMGFKPDDITF 372
+AV F + G K + ITF
Sbjct: 500 EAVVCFLNAQRAGQKLNRITF 520
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 110/193 (56%), Gaps = 5/193 (2%)
Query: 192 LFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKES 251
L+ +DV+ +++N Y + GD +AR+ D+ P +N VSW+ +++GYS+N + KE+
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 252 LKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL--GHWIHQHFVIEKGMHPSVTLANAI 309
L +M+ G+ ++A VSVL AC ++ + + G IH + + ++N +
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHG-LMFKLSYAVDAVVSNVL 145
Query: 310 LDMYAKC-GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
+ MY KC GS+ A F I +N VSWNS+I+ Y+ G + A +F M+ G +P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 369 DITFVNLL-TACS 380
+ TF +L+ TACS
Sbjct: 206 EYTFGSLVTTACS 218
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 166/370 (44%), Gaps = 53/370 (14%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
H + K D ++ + N LI+ Y + G AR+VFDE L++ V+W + GY+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEM--GRRVHENMEKKNMRCSLNLHN 174
+ A+ M++ + N+ ++VL AC ++G + + GR++H M K + + N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 175 ALLDMYVKC-GSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
L+ MY KC GS+ A F +E ++ SW S+++ Y++ GD +A R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR----------- 192
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
+F M G P E+ S+++ L+ ++
Sbjct: 193 --------------------IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMC 232
Query: 294 VIEK-GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
I+K G+ + + + ++ +AK GS+ A +VFN + RN V+ N ++ G ++
Sbjct: 233 TIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE 292
Query: 353 AVNVFDQMRCM-GFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
A +F M M P+ ++V LL++ Y++ G+K RE + +
Sbjct: 293 ATKLFMDMNSMIDVSPE--SYVILLSSFPE-----------YSLAEEVGLKKGREVHGHV 339
Query: 412 IDLLGRTGLL 421
I TGL+
Sbjct: 340 IT----TGLV 345
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 264/506 (52%), Gaps = 38/506 (7%)
Query: 49 GDFEGE-SVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMF 107
GDF +V+ +RK + S N LI+ Y G L +AR+VFDE + + TW M
Sbjct: 8 GDFPSAVAVYGRMRKKNYMSS----NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 108 DGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
G +E + LF M P+E TL +V S + + + +G+++H K +
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQT 227
L ++++L MY++ G L ++ +
Sbjct: 124 LDLVVNSSLAHMYMRNGKL-------------------------------QDGEIVIRSM 152
Query: 228 PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
P +N+V+W+ ++ G +QN P+ L L+ M +G P + V+VLS+C L+ G
Sbjct: 153 PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAAN 347
IH I+ G V + ++++ MY+KCG + AA+ F+ + + V W+SMI+ Y +
Sbjct: 213 QIHAE-AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFH 271
Query: 348 GQAKQAVNVFDQM-RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE 406
GQ +A+ +F+ M + +++ F+NLL ACSH GL +G E F M YG KP +
Sbjct: 272 GQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLK 331
Query: 407 HYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSL 466
HY+C++DLLGR G L +A +I SMP++ W LL+AC +H N E+A+ +L +
Sbjct: 332 HYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 391
Query: 467 DPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADES 526
DP DS YVLLAN+ A+ ++W DV VR MRDK VKK G S E GE +F + D S
Sbjct: 392 DPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRS 451
Query: 527 HPQSEEIYKVLDEIFLSSELEDYDTD 552
+S+EIY L E+ L +L+ Y D
Sbjct: 452 QSKSKEIYSYLKELTLEMKLKGYKPD 477
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 146/276 (52%), Gaps = 3/276 (1%)
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
+ MY K G +A ++ RM ++ S ++NGY + GDL NAR+ D+ P + + +W+
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
AM+AG Q +E L LF EM G G P+E+ L SV S L +++G IH + I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHG-YTIK 119
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
G+ + + +++ MY + G ++ V ++ RNLV+WN++I G A NG + + +
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 357 FDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG 416
+ M+ G +P+ ITFV +L++CS + +GQ+ + G S +I +
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ-IHAEAIKIGASSVVAVVSSLISMYS 238
Query: 417 RTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
+ G L +A + + + E W ++++A HG
Sbjct: 239 KCGCLGDAAKAFSEREDED-EVMWSSMISAYGFHGQ 273
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 151/370 (40%), Gaps = 35/370 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI G + S F M D + L G+ +H
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G + +L+V + L H Y G L+ V ++++V W T+ G A C E +
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
L+ +M PN++T + VLS+CS + G+++H K + + ++L+ MY
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KCG L A + F E D W+SM++ Y G
Sbjct: 239 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG-------------------------- 272
Query: 242 YSQNNKPKESLKLFHEMM-GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
+ E+++LF+ M + E A +++L AC + G + V + G
Sbjct: 273 -----QGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
P + ++D+ + G ++ A + ++ + ++V W ++++ + A+ A VF +
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 360 MRCMGFKPDD 369
+ + P+D
Sbjct: 388 I--LQIDPND 395
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 269/521 (51%), Gaps = 47/521 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
M+NTMIRGY + P AFS F ++ + +D SF+ LK+C GE +H +
Sbjct: 92 MFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIA 151
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK-DVVTWTTMFDGYASRNCSELA 119
+ GF +RN LIHFY G + AR+VFDE D VT++T+ +GY + LA
Sbjct: 152 LRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALA 211
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
++LF +M + +V N TL++ LSA S +GD+ H K + L+L AL+ M
Sbjct: 212 LDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM 271
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y K G + +ARR D K+VV+W+ M+
Sbjct: 272 Y-------------------------------GKTGGISSARRIFDCAIRKDVVTWNCMI 300
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
Y++ +E + L +M + P V +LS+C +G + + E+ +
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV-ADLLEEERI 359
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
L A++DMYAK G +E A E+FN + ++++ SW +MI+GY A+G A++AV +F++
Sbjct: 360 ALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNK 419
Query: 360 MR---CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG 416
M C +P++ITF+ +L ACSHGGL+ EG F M Y PK EHY C++DLLG
Sbjct: 420 MEEENC-KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLG 478
Query: 417 RTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVL 476
R G L+EAYELI ++P+ AW ALL ACR++GN +L L + +L
Sbjct: 479 RAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAIL 538
Query: 477 LAN---ICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVD 514
LA + N K D + +KG +K G+S +E++
Sbjct: 539 LAGTHAVAGNPEKSLDNE------LNKG-RKEAGYSAIEIE 572
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 190/419 (45%), Gaps = 39/419 (9%)
Query: 34 CRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFD 93
C+ + L++C + E +H + K G D + + L+ F + +++A +F+
Sbjct: 28 CQKLINDLRSCRD---TVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLD-IRYASSIFE 83
Query: 94 ESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEM 153
S ++ + TM GY+ + E A +FN + + + + I L +CS+ + +
Sbjct: 84 HVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSI 143
Query: 154 GRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM-ETRDVFSWTSMVNGYA 212
G +H + +L NAL+ Y CG + AR++FD M ++ D ++++++NGY
Sbjct: 144 GEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 213 KCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVS 272
Q +K +L LF M + VV L+S
Sbjct: 204 -------------------------------QVSKKALALDLFRIMRKSEVVVNVSTLLS 232
Query: 273 VLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER 332
LSA L L+ H I+ G+ + L A++ MY K G I +A +F+ +
Sbjct: 233 FLSAISDLGDLSGAESAHV-LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRK 291
Query: 333 NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYF 392
++V+WN MI YA G ++ V + QM+ KP+ TFV LL++C++ G+
Sbjct: 292 DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 393 YTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
+E I + ++D+ + GLL++A E+ M + + +W A+++ HG
Sbjct: 352 DLLEEER-IALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVK-SWTAMISGYGAHG 408
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 293/589 (49%), Gaps = 43/589 (7%)
Query: 2 WNTMIRGYRKARN-PNIAFSYFLRMLRHR---VEMDCRSFVFALKACEELSGDFEGESVH 57
+NT++ G+ K + A F M R + +D + +K +L+ F GE +H
Sbjct: 89 YNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH 148
Query: 58 CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDES---------------------- 95
V+ K G D + LIH Y+ G K +F+ S
Sbjct: 149 GVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGD 208
Query: 96 ------------SLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLS 143
L D ++W T+ GYA E A+++ M ++ +E + AVL+
Sbjct: 209 IDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLN 268
Query: 144 ACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
S + +++G+ VH + K + + + ++D+Y KCG++ A +++S
Sbjct: 269 VLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYS 328
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
+SM+ GY+ G + A+R D KN+V W+AM GY +P L+L +
Sbjct: 329 ASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANET 388
Query: 264 -VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
P+ +VSVL AC + + G IH H + G+ L A +DMY+KCG++E A
Sbjct: 389 NTPDSLVMVSVLGACSLQAYMEPGKEIHGH-SLRTGILMDKKLVTAFVDMYSKCGNVEYA 447
Query: 323 AEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
+F++ ER+ V +N+MIAG A +G ++ F+ M GFKPD+ITF+ LL+AC H
Sbjct: 448 ERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHR 507
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAA-WG 441
GL+ EG++YF +M Y I P+ HY+CMIDL G+ L +A EL+ + +A G
Sbjct: 508 GLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILG 567
Query: 442 ALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKG 501
A LNAC + N EL + LL ++ + Y+ +AN A+ +W +++R+R MR K
Sbjct: 568 AFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKE 627
Query: 502 VKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYD 550
++ G S +D +F F +D SH ++E IY +L F++ +L + D
Sbjct: 628 LEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLH--FVTKDLSEID 674
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 202/451 (44%), Gaps = 74/451 (16%)
Query: 73 NGLIHFYADRGWLKHAREVFDE--------------------------------SSLKDV 100
N L++ Y+ G L+ AR VFDE + +D+
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDL 86
Query: 101 VTWTTMFDGYASRN-CSELAMELFNLMLR---GDVEPNEVTLIAVLSACSQMGDIEMGRR 156
+T+ T+ G+A + C A+E+F M R D+ ++ T+ ++ +++ ++ G +
Sbjct: 87 ITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQ 146
Query: 157 VHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDR--METRDVFSWTSMVNGYAKC 214
+H + K + ++L+ MY KCG +F+ +E D + +M+ Y +
Sbjct: 147 LHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCRE 206
Query: 215 GDLENARRFLDQTPHKN-VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSV 273
GD++ A + P N +SW+ ++AGY+QN +E+LK+ M G+ +EH+ +V
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAV 266
Query: 274 LSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERN 333
L+ L L +G +H V++ G + + +++ I+D+Y KCG+++ A N
Sbjct: 267 LNVLSSLKSLKIGKEVHAR-VLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN 325
Query: 334 LVSWNSMIAGYAANGQAKQAVNVFDQMR----------CMGF------------------ 365
L S +SMI GY++ G+ +A +FD + +G+
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA 385
Query: 366 ----KPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
PD + V++L ACS + G+E + GI ++ + +D+ + G +
Sbjct: 386 NETNTPDSLVMVSVLGACSLQAYMEPGKE-IHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGN 452
+ A E I + + A++ C HG+
Sbjct: 445 EYA-ERIFDSSFERDTVMYNAMIAGCAHHGH 474
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 2/199 (1%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEM-DCRSFVFALKACEELSGDFEGESVHCV 59
+W M GY R P+ + + D V L AC + G+ +H
Sbjct: 359 VWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGH 418
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ G + + + Y+ G +++A +FD S +D V + M G A +
Sbjct: 419 SLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKS 478
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLD 178
+ F M G +P+E+T +A+LSAC G + G + ++M E N+ + ++D
Sbjct: 479 FQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMID 538
Query: 179 MYVKCGSLVAARELFDRME 197
+Y K L A EL + ++
Sbjct: 539 LYGKAYRLDKAIELMEGID 557
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 280 LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNS 339
+ CL G ++H I+ G + +N ++++Y+K G + A VF+ + ERN+ SWN+
Sbjct: 1 MKCLKDG-FLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNA 59
Query: 340 MIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH-GGLISEGQEYFYTMER 397
+IA Y K+A +F+ C + D IT+ LL+ + G SE E F M R
Sbjct: 60 VIAAYVKFNNVKEARELFESDNC---ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHR 115
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 258/477 (54%), Gaps = 37/477 (7%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE 132
N ++H Y G + A ++F + K+V++WTTM G S A++LF MLR ++
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
V++AC+ MG +VH + +K G L
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVH-------------------GLIIKLGFLY----- 258
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
+ + S++ YA C + ++R+ D+ H+ V W+A+L+GYS N K +++L
Sbjct: 259 -------EEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDAL 311
Query: 253 KLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDM 312
+F M+ ++P + S L++C L L+ G +H ++ G+ + N+++ M
Sbjct: 312 SIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHG-VAVKLGLETDAFVGNSLVVM 370
Query: 313 YAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITF 372
Y+ G++ A VF I ++++VSWNS+I G A +G+ K A +F QM + +PD+ITF
Sbjct: 371 YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430
Query: 373 VNLLTACSHGGLISEGQEYFYTMERNYG-IKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
LL+ACSH G + +G++ FY M I K +HY+CM+D+LGR G LKEA ELI M
Sbjct: 431 TGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
Query: 432 PMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVK 491
++P E W ALL+ACRMH +V+ +A + +LD + S YVLL+NI A+ +W +V
Sbjct: 491 VVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVS 550
Query: 492 RVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELED 548
++R M+ G+ K PG S V + G+ EF D+ P IY+ L+ FL +L++
Sbjct: 551 KLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLE--FLREKLKE 603
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 202/419 (48%), Gaps = 17/419 (4%)
Query: 66 DSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNL 125
+ E+L+ N L+ D AREVF++ V +T M GY N A+ LF+
Sbjct: 37 NREVLICNHLLSRRID-----EAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDE 91
Query: 126 MLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGS 185
M DV V+ +++S C + GD+ ++ + M ++ S+ A+++ + G
Sbjct: 92 MPVRDV----VSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSWTAMVNGCFRSGK 143
Query: 186 LVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQN 245
+ A LF +M +D +W SMV+GY + G +++A + Q P KNV+SW+ M+ G QN
Sbjct: 144 VDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQN 203
Query: 246 NKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTL 305
+ E+L LF M+ + V++AC ++G +H +I+ G +
Sbjct: 204 ERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHG-LIIKLGFLYEEYV 262
Query: 306 ANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGF 365
+ +++ YA C I + +VF+ + W ++++GY+ N + + A+++F M
Sbjct: 263 SASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI 322
Query: 366 KPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAY 425
P+ TF + L +CS G + G+E + + G++ + ++ + +G + +A
Sbjct: 323 LPNQSTFASGLNSCSALGTLDWGKE-MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAV 381
Query: 426 ELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPE-DSGIYVLLANICAN 483
+ + + +W +++ C HG + A + ++ L+ E D + L + C++
Sbjct: 382 SVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSH 439
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 151/343 (44%), Gaps = 40/343 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W TMI G + A F MLR ++ R F + AC G VH ++
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
KLGF E V LI FYA+ + +R+VFDE + V WT + GY+ E A+
Sbjct: 253 KLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALS 312
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F+ MLR + PN+ T + L++CS +G ++ G+ +H K + + N+L+ MY
Sbjct: 313 IFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
G++ A +F ++ + + SW S++ G A
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCA----------------------------- 403
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH- 300
Q+ + K + +F +M+ P+E +LSAC L G + + + G++
Sbjct: 404 --QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL--FYYMSSGINH 459
Query: 301 --PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMI 341
+ ++D+ +CG ++ A E+ ER +V N M+
Sbjct: 460 IDRKIQHYTCMVDILGRCGKLKEAEELI----ERMVVKPNEMV 498
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+W ++ GY + A S F MLR+ + + +F L +C L G+ +H V
Sbjct: 293 VWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVA 352
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
KLG +++ V N L+ Y+D G + A VF + K +V+W ++ G A + A
Sbjct: 353 VKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAF 412
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEK--KNMRCSLNLHNALLD 178
+F M+R + EP+E+T +LSACS G +E GR++ M ++ + + ++D
Sbjct: 413 VIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVD 472
Query: 179 MYVKCGSLVAARELFDRMETR 199
+ +CG L A EL +RM +
Sbjct: 473 ILGRCGKLKEAEELIERMVVK 493
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 269/526 (51%), Gaps = 31/526 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI GY N + RM + D ++F +L + G +HC +
Sbjct: 213 WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIV 272
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K GFD ++ ++ LI Y G + + V + KDVV WT M G +E A+
Sbjct: 273 KTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALI 332
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F+ ML+ + + + +V+++C+Q+G ++G VH + + N+L+ MY
Sbjct: 333 VFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYA 392
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KCG L + +F+RM RD+ SW ++++GYA+ DL A ++ K V
Sbjct: 393 KCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQ------- 445
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
+ +VS+L AC L +G IH VI + P
Sbjct: 446 -----------------------VDSFTVVSLLQACSSAGALPVGKLIHC-IVIRSFIRP 481
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ A++DMY+KCG +EAA F++IS +++VSW +IAGY +G+ A+ ++ +
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G +P+ + F+ +L++CSH G++ +G + F +M R++G++P EH +C++DLL R +
Sbjct: 542 HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRI 601
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
++A++ +P G +L+ACR +G E+ + +++ L P D+G YV L +
Sbjct: 602 EDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSF 661
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESH 527
A ++W DV + MR G+KK+PG S +E++G+ F + SH
Sbjct: 662 AAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 206/441 (46%), Gaps = 41/441 (9%)
Query: 18 AFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIH 77
S F ML +++ D +F LKAC L G S+H V GF S+ + + L++
Sbjct: 30 VLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVN 89
Query: 78 FYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVT 137
YA G L HAR+VF+E +DVV WT M Y+ A L N M ++P VT
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 138 LIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRME 197
L+ +LS ++ ++ +H+ C + + N++L++Y KC + A++LFD+ME
Sbjct: 150 LLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME 206
Query: 198 TRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHE 257
RD+ SW +M++GYA G++ E LKL +
Sbjct: 207 QRDMVSWNTMISGYASVGNMS-------------------------------EILKLLYR 235
Query: 258 MMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
M G G+ P++ + LS G + L +G +H +++ G + L A++ MY KCG
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ-IVKTGFDVDMHLKTALITMYLKCG 294
Query: 318 SIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLT 377
EA+ V I +++V W MI+G G+A++A+ VF +M G +++
Sbjct: 295 KEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVA 354
Query: 378 ACSHGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
+C+ G G + Y + Y + + +I + + G L ++ + M +
Sbjct: 355 SCAQLGSFDLGASVHGYVLRHGYTLDTPA--LNSLITMYAKCGHLDKSLVIFERMNERDL 412
Query: 437 EAAWGALLNACRMHGNVELAR 457
+W A+++ NV+L +
Sbjct: 413 -VSWNAIISGYAQ--NVDLCK 430
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 47/260 (18%)
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
S + K+ L F M+ ++P+ S+L AC L L+ G IHQ V+ G
Sbjct: 22 SSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQ-VLVNGFSSD 80
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
++++++++YAK G + A +VF + ER++V W +MI Y+ G +A ++ ++MR
Sbjct: 81 FYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF 140
Query: 363 MGFKPDDITFVNLLTA-----------------------------------CSHGGLISE 387
G KP +T + +L+ C H G +
Sbjct: 141 QGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG---D 197
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM---PMQPCEAAWGALL 444
++ F ME+ + ++ MI G + E +L+ M ++P + +GA L
Sbjct: 198 AKDLFDQMEQRDMVS-----WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASL 252
Query: 445 NACRMHGNVELARLSACNLL 464
+ ++E+ R+ C ++
Sbjct: 253 SVSGTMCDLEMGRMLHCQIV 272
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 224/381 (58%), Gaps = 9/381 (2%)
Query: 181 VKCGSLVAARELFDRMET----RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
+K G L+ ++ ++ + D T++++ Y+ C + +A + D+ P ++ VSW+
Sbjct: 124 IKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWN 183
Query: 237 AMLAGYSQNNKPKESLKLFHEM---MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
+ + Y +N + ++ L LF +M + V P+ + L AC L L+ G +H F
Sbjct: 184 VLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD-F 242
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
+ E G+ ++ L+N ++ MY++CGS++ A +VF + ERN+VSW ++I+G A NG K+A
Sbjct: 243 IDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEA 302
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERN-YGIKPKREHYSCMI 412
+ F++M G P++ T LL+ACSH GL++EG +F M + IKP HY C++
Sbjct: 303 IEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVV 362
Query: 413 DLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSG 472
DLLGR LL +AY LI SM M+P W LL ACR+HG+VEL +L+ L E++G
Sbjct: 363 DLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAG 422
Query: 473 IYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEE 532
YVLL N + KW V +RSLM++K + PG S +E+ G EF+V D SHP+ EE
Sbjct: 423 DYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEE 482
Query: 533 IYKVLDEIFLSSELEDYDTDI 553
IYK+L EI ++ Y +I
Sbjct: 483 IYKMLAEINQQLKIAGYVAEI 503
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 39/283 (13%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCR--SFVFALKACEELSGDFEGE-SVHCV 59
NTMIR + ++ P F F R LR + S FALK C + SGD G +H
Sbjct: 81 NTMIRAFSLSQTPCEGFRLF-RSLRRNSSLPANPLSSSFALKCCIK-SGDLLGGLQIHGK 138
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ GF S+ L+ L+ Y+ A +VFDE +D V+W +F Y +
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 120 MELFNLM---LRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
+ LF+ M + G V+P+ VT + L AC+ +G ++ G++VH+ +++ + +LNL N L
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
+ MY +CGS+ A ++F M R+V SWT++++G A
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA------------------------ 294
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQ 279
N KE+++ F+EM+ G+ PEE L +LSAC
Sbjct: 295 -------MNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSH 330
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 6/231 (2%)
Query: 2 WNTMIRGY---RKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHC 58
WN + Y ++ R+ + F + V+ D + + AL+AC L G+ VH
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
+ + G L + N L+ Y+ G + A +VF ++VV+WT + G A +
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN--AL 176
A+E FN ML+ + P E TL +LSACS G + G + M + NLH+ +
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCV 361
Query: 177 LDMYVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENARRFLDQ 226
+D+ + L A L ME + D W +++ GD+E R +
Sbjct: 362 VDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISH 412
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 252/475 (53%), Gaps = 36/475 (7%)
Query: 85 LKHAREVFDE---SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAV 141
L AR++FD+ SSL W M GY+ A+ ++ ML +EP ++
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 142 LSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDV 201
L AC + D+ +GR +H + K+ + ++N LL +Y++ G LFD
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESG-------LFD------- 288
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
+AR+ D +NVV+W+++++ S+ + E LF +M
Sbjct: 289 -----------------DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
+ L ++L AC +++ L G IH +++ P V L N+++DMY KCG +E
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQ-ILKSKEKPDVPLLNSLMDMYGKCGEVEY 390
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
+ VF+ + ++L SWN M+ YA NG ++ +N+F+ M G PD ITFV LL+ CS
Sbjct: 391 SRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD 450
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWG 441
GL G F M+ + + P EHY+C++D+LGR G +KEA ++I +MP +P + WG
Sbjct: 451 TGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWG 510
Query: 442 ALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKG 501
+LLN+CR+HGNV + ++A L L+P + G YV+++NI A+ + W +V ++R +M+ +G
Sbjct: 511 SLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRG 570
Query: 502 VKKIPGHSLVEVDGEFKEFLV-ADESHPQSEEIYKVLDEIFLSSELEDYDTDIFV 555
VKK G S V+V + + F+ S+E KV E+ + E Y + V
Sbjct: 571 VKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSV 625
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 153/342 (44%), Gaps = 32/342 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+W M GY + +P A ++ ML +E S ALKAC +L G +H +
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K + +V N L+ Y + G AR+VFD S ++VVTW ++ + +
Sbjct: 263 VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMF 322
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
LF M + + TL +L ACS++ + G+ +H + K + + L N+L+DMY
Sbjct: 323 NLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMY 382
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCG + +R +FD M T+D+ SW M+N YA G++E
Sbjct: 383 GKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIE---------------------- 420
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
E + LF M+ +GV P+ V++LS C G + + E +
Sbjct: 421 ---------EVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVS 471
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS-WNSMI 341
P++ ++D+ + G I+ A +V + + S W S++
Sbjct: 472 PALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 253/478 (52%), Gaps = 36/478 (7%)
Query: 80 ADRGW---LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEV 136
A GW + +A +F + TM GY + E A+ +N M++ EP+
Sbjct: 74 AHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNF 133
Query: 137 TLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM 196
T +L AC+++ I G+++H + K +
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEA---------------------------- 165
Query: 197 ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFH 256
DVF S++N Y +CG++E + ++ K SWS+M++ + E L LF
Sbjct: 166 ---DVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 257 EMMG-AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAK 315
M + EE +VS L AC LNLG IH F++ ++ + +++DMY K
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSIHG-FLLRNISELNIIVQTSLVDMYVK 281
Query: 316 CGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNL 375
CG ++ A +F + +RN +++++MI+G A +G+ + A+ +F +M G +PD + +V++
Sbjct: 282 CGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSV 341
Query: 376 LTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQP 435
L ACSH GL+ EG+ F M + ++P EHY C++DLLGR GLL+EA E I S+P++
Sbjct: 342 LNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEK 401
Query: 436 CEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRS 495
+ W L+ CR+ N+EL +++A LL L + G Y+L++N+ + + W DV R R+
Sbjct: 402 NDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRT 461
Query: 496 LMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTDI 553
+ KG+K+ PG S+VE+ G+ F+ D SHP+ +EIYK+L ++ + E Y D+
Sbjct: 462 EIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDL 519
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 164/343 (47%), Gaps = 33/343 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NTMIRGY + A ++ M++ E D ++ LKAC L EG+ +H V
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
KLG ++++ V+N LI+ Y G ++ + VF++ K +W++M A +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 122 LFNLML-RGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
LF M +++ E +++ L AC+ G + +G +H + + ++ + +L+DMY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
VKCG L A +F +ME R+ ++++M++G A G+ E+A
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA-------------------- 319
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
L++F +M+ G+ P+ VSVL+AC + G + + E +
Sbjct: 320 -----------LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVE 368
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIA 342
P+ ++D+ + G +E A E +I E+N V W + ++
Sbjct: 369 PTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/588 (29%), Positives = 278/588 (47%), Gaps = 77/588 (13%)
Query: 41 LKACEELSGDFEGESVHC---VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL 97
LK C S GES+H V + + N LI+ Y AR++FD
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 98 KDVVTWTTMFDGYASRNCSELAMELFNLML-RGDVEPNEVTLIAVLSACSQMGDIEMGRR 156
++VV+W M GY + ++LF M G+ PNE V +CS G IE G++
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 157 VHENMEKKNM-------------------------------RCSLNLHNALLDMYVKCGS 185
H K + C L++ ++ L Y++CG+
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217
Query: 186 LVAARELFDRMETRDVFSWT---------------------------------------- 205
++ + D F W
Sbjct: 218 FKEGLDVLRKTANED-FVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 206 SMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP 265
+++N Y KCG + A+R D T +N+ + ++ Y Q+ +E+L LF +M V P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 266 EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
E+ +L++ +LS L G +H V++ G V + NA+++MYAK GSIE A +
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHG-LVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395
Query: 326 FNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
F+ ++ R++V+WN+MI+G + +G ++A+ FD+M G P+ ITF+ +L ACSH G +
Sbjct: 396 FSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFV 455
Query: 386 SEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLN 445
+G YF + + + ++P +HY+C++ LL + G+ K+A + + + P++ AW LLN
Sbjct: 456 EQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLN 515
Query: 446 ACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKI 505
AC + N L + A + P DSG+YVLL+NI A R+W V +VRSLM ++GVKK
Sbjct: 516 ACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE 575
Query: 506 PGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTDI 553
PG S + + + FL D HP+ IY + E+ + Y D+
Sbjct: 576 PGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDV 623
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVI--EKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
L +L C S L +G IH H ++ + N+++++Y KC A ++F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG-FKPDDITFVNLLTACSHGGLIS 386
+ ERN+VSW +M+ GY +G + + +F M G +P++ + +CS+ G I
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 387 EGQEY 391
EG+++
Sbjct: 154 EGKQF 158
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 224/397 (56%), Gaps = 8/397 (2%)
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACS--QMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
F M R V P+ T V AC+ + GD+ + + +H + + L N L+ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y + +A +LFD RDV ++ +++G K ++ AR D P +++VSW++++
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+GY+Q N +E++KLF EM+ G+ P+ A+VS LSAC Q G IH + K +
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHD-YTKRKRL 280
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
LA ++D YAKCG I+ A E+F S++ L +WN+MI G A +G + V+ F +
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G KPD +TF+++L CSH GL+ E + F M Y + + +HY CM DLLGR G
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAG 400
Query: 420 LLKEAYELITSMPMQPCE----AAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYV 475
L++EA E+I MP AW LL CR+HGN+E+A +A + +L PED G+Y
Sbjct: 401 LIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYK 460
Query: 476 LLANICANERKWGDVKRVRSLM-RDKGVKKIPGHSLV 511
++ + AN +W +V +VR ++ RDK VKK G S V
Sbjct: 461 VMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 170/394 (43%), Gaps = 85/394 (21%)
Query: 21 YFLRMLRHRVEMDCRSFVFALKACE-ELSGDFE-GESVHCVVRKLGFDSELLVRNGLIHF 78
+F+ M R V D +F F KAC + +GD +++HC + G S+L N LI
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 79 YADRGWLKHAREVFDESSLKDVVT-------------------------------WTTMF 107
Y+ + A ++FDE+ +DVVT W ++
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 108 DGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
GYA N A++LF+ M+ ++P+ V +++ LSAC+Q GD + G+ +H+ ++K +
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQT 227
L L+D Y KCG + A E+F+ + +F+W +M+ G A G+ E
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGE--------- 332
Query: 228 PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL---- 283
++ F +M+ +G+ P+ +SVL C +
Sbjct: 333 ----------------------LTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEAR 370
Query: 284 NLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE-----RNLVSWN 338
NL + + + + M +A D+ + G IE AAE+ + + L++W+
Sbjct: 371 NLFDQMRSLYDVNREMKHYGCMA----DLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWS 426
Query: 339 SMIAGYAANGQ---AKQAVNVFDQMRCMGFKPDD 369
++ G +G A++A N R P+D
Sbjct: 427 GLLGGCRIHGNIEIAEKAAN-----RVKALSPED 455
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 8/228 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCVV 60
WN++I GY + + A F M+ ++ D + V L AC + SGD++ G+++H
Sbjct: 217 WNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ-SGDWQKGKAIHDYT 275
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
++ + + GL+ FYA G++ A E+F+ S K + TW M G A EL +
Sbjct: 276 KRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTV 335
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEK-KNMRCSLNLHNALLDM 179
+ F M+ ++P+ VT I+VL CS G ++ R + + M ++ + + + D+
Sbjct: 336 DYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADL 395
Query: 180 YVKCGSLVAARELFDRMET-----RDVFSWTSMVNGYAKCGDLENARR 222
+ G + A E+ ++M + +W+ ++ G G++E A +
Sbjct: 396 LGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 282/553 (50%), Gaps = 36/553 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++I K R A + M+ + V D + KA +LS + E + H +
Sbjct: 133 WNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAV 192
Query: 62 KLGFD-SELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
LG + S + V + L+ Y G + A+ V D KDVV T + GY+ + A+
Sbjct: 193 ILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAV 252
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+ F ML V+PNE T +VL +C + DI G+ +H M K +L +LL MY
Sbjct: 253 KAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMY 312
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
++ C ++++ R + N VSW+++++
Sbjct: 313 LR-------------------------------CSLVDDSLRVFKCIEYPNQVSWTSLIS 341
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
G QN + + +L F +MM + P L S L C L+ G IH V + G
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHG-IVTKYGFD 400
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+ ++D+Y KCG + A VF+ +SE +++S N+MI YA NG ++A+++F++M
Sbjct: 401 RDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
+G +P+D+T +++L AC++ L+ EG E F + ++ I +HY+CM+DLLGR G
Sbjct: 461 INLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGR 519
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
L+EA E++T+ + P W LL+AC++H VE+A +L ++P D G +L++N+
Sbjct: 520 LEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNL 578
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADE-SHPQSEEIYKVLDE 539
A+ KW V ++S M+D +KK P S VE++ E F+ D SHP SE+I + L+E
Sbjct: 579 YASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEE 638
Query: 540 IFLSSELEDYDTD 552
+ S+ Y D
Sbjct: 639 LIKKSKDLGYVED 651
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 175/367 (47%), Gaps = 35/367 (9%)
Query: 54 ESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASR 113
+++ + K GF +E+ + L+ G + +AR+VFD S + +VTW ++
Sbjct: 85 KTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 114 NCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS-LNL 172
S+ A+E++ LM+ +V P+E TL +V A S + + +R H + S + +
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 173 HNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV 232
+AL+DMYVK G A+ + DR+E +DV T+++
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI------------------------ 239
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
GYSQ + E++K F M+ V P E+ SVL +CG L + G IH
Sbjct: 240 -------VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHG- 291
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
+++ G ++ ++L MY +C ++ + VF I N VSW S+I+G NG+ +
Sbjct: 292 LMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM 351
Query: 353 AVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
A+ F +M KP+ T + L CS+ + EG++ + + YG + S +I
Sbjct: 352 ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ-IHGIVTKYGFDRDKYAGSGLI 410
Query: 413 DLLGRTG 419
DL G+ G
Sbjct: 411 DLYGKCG 417
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 158/319 (49%), Gaps = 7/319 (2%)
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
S + +V+ KCGD++ AR+ D +++V+W++++A ++ + KE+++++ M+
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
V+P+E+ L SV A LS H VI +V + +A++DMY K G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
A V + + E+++V ++I GY+ G+ +AV F M +P++ T+ ++L +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWG 441
I G+ M ++ G + + ++ + R L+ ++ + + P + +W
Sbjct: 280 LKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWT 337
Query: 442 ALLNACRMHGNVELARLSACNLL--SLDPEDSGIYVLLANICANERKWGDVKRVRSLMRD 499
+L++ +G E+A + ++ S+ P + L C+N + + +++ ++
Sbjct: 338 SLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG-CSNLAMFEEGRQIHGIVTK 396
Query: 500 KGV--KKIPGHSLVEVDGE 516
G K G L+++ G+
Sbjct: 397 YGFDRDKYAGSGLIDLYGK 415
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
H +L C ++ I H + K P+ + ++D KCG I+ A +VF+
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHML--KSGFPAEISGSKLVDASLKCGDIDYARQVFD 123
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
+SER++V+WNS+IA + ++K+AV ++ M PD+ T ++ A S L E
Sbjct: 124 GMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 388 GQ 389
Q
Sbjct: 184 AQ 185
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 227/411 (55%), Gaps = 34/411 (8%)
Query: 130 DVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAA 189
VEP T +L C Q + G+R+H M + L LL +Y G L A
Sbjct: 105 QVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 190 RELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPK 249
LF ++ RD ++ W+AM++GY Q +
Sbjct: 163 GILFRSLKIRD-------------------------------LIPWNAMISGYVQKGLEQ 191
Query: 250 ESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAI 309
E L ++++M +VP+++ SV AC L L G H +I++ + ++ + +A+
Sbjct: 192 EGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA-VMIKRCIKSNIIVDSAL 250
Query: 310 LDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDD 369
+DMY KC S VF+ +S RN+++W S+I+GY +G+ + + F++M+ G +P+
Sbjct: 251 VDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNP 310
Query: 370 ITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELIT 429
+TF+ +LTAC+HGGL+ +G E+FY+M+R+YGI+P+ +HY+ M+D LGR G L+EAYE +
Sbjct: 311 VTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVM 370
Query: 430 SMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGD 489
P + WG+LL ACR+HGNV+L L+A L LDP + G YV+ AN A+
Sbjct: 371 KSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREA 430
Query: 490 VKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
+VR M + GVKK PG+S +E+ GE F+ D SH SE+IYK + E+
Sbjct: 431 ASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 151/326 (46%), Gaps = 38/326 (11%)
Query: 30 VEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAR 89
++++ ++ L+ C++ +G+ +H + +GF ++ L+ YA G L+ A
Sbjct: 104 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 90 EVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
+F ++D++ W M GY + + + ++ M + + P++ T +V ACS +
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
+E G+R H M K+ ++ ++ + +AL+DMY KC S +FD++ TR+V +WTS+++
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 210 GYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
GY GY + K E LK F +M G P
Sbjct: 284 GY-----------------------------GY--HGKVSEVLKCFEKMKEEGCRPNPVT 312
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEK---GMHPSVTLANAILDMYAKCGSIEAAAE-V 325
+ VL+AC ++ G W +HF K G+ P A++D + G ++ A E V
Sbjct: 313 FLVVLTACNHGGLVDKG-W--EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFV 369
Query: 326 FNAISERNLVSWNSMIAGYAANGQAK 351
+ + + W S++ +G K
Sbjct: 370 MKSPCKEHPPVWGSLLGACRIHGNVK 395
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 9/269 (3%)
Query: 2 WNTMIRGY-RKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN MI GY +K F Y+ M ++R+ D +F +AC L G+ H V+
Sbjct: 177 WNAMISGYVQKGLEQEGLFIYY-DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM 235
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K S ++V + L+ Y VFD+ S ++V+TWT++ GY +
Sbjct: 236 IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVL 295
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDM 179
+ F M PN VT + VL+AC+ G ++ G +M++ + + A++D
Sbjct: 296 KCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDT 355
Query: 180 YVKCGSLVAARELFDRMETRD-VFSWTSMVNGYAKCGDLE----NARRFLDQTPHKNVVS 234
+ G L A E + ++ W S++ G+++ A +FL+ P N +
Sbjct: 356 LGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDP-TNGGN 414
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
+ GY+ + + K+ +M AGV
Sbjct: 415 YVVFANGYASCGLREAASKVRRKMENAGV 443
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 8/216 (3%)
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH-QHFVIEK 297
L G + KE++ L G V PE +A++ L C Q G IH Q FV+
Sbjct: 83 LKGLCVTGRLKEAVGLLWSS-GLQVEPETYAVL--LQECKQRKEYTKGKRIHAQMFVV-- 137
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVF 357
G + L +L +YA G ++ A +F ++ R+L+ WN+MI+GY G ++ + ++
Sbjct: 138 GFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIY 197
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
MR PD TF ++ ACS + G+ M + IK S ++D+ +
Sbjct: 198 YDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFK 256
Query: 418 TGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNV 453
+ + + + + W +L++ HG V
Sbjct: 257 CSSFSDGHRVFDQLSTRNV-ITWTSLISGYGYHGKV 291
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 259/464 (55%), Gaps = 17/464 (3%)
Query: 53 GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS 112
G+ +H K G S+++V + LI Y G + AR+VFDE ++V TW M GY S
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM--EKKNMRCSL 170
+ LA LF + V N VT I ++ + +IE R + E M E KN++
Sbjct: 125 NGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKA-- 179
Query: 171 NLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK 230
+ +L +YV + AR+ F+ + ++ F W+ M++GY + GD+ AR + +
Sbjct: 180 --WSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR 237
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
++V W+ ++AGY+QN +++ F M G G P+ + S+LSAC Q L++G +H
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
+ +G+ + ++NA++DMYAKCG +E A VF +IS R++ NSMI+ A +G+
Sbjct: 298 S-LINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKG 356
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSC 410
K+A+ +F M + KPD+ITF+ +LTAC HGG + EG + F M + +KP +H+ C
Sbjct: 357 KEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGC 415
Query: 411 MIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPED 470
+I LLGR+G LKEAY L+ M ++P + GALL AC++H + E+A ++
Sbjct: 416 LIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSI 474
Query: 471 SGIY-----VLLANICANERKWGDVKRVRSLMRDKGVKKIPGHS 509
+ Y ++N+ A+ +W + +R M +G++K PG S
Sbjct: 475 TNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCV 59
+WNT+I GY + + A F M E D + L AC + SG + G VH +
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ-SGRLDVGREVHSL 299
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ G + V N LI YA G L++A VF+ S++ V +M A + A
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEA 359
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+E+F+ M D++P+E+T IAVL+AC G + G ++ M+ ++++ ++ L+ +
Sbjct: 360 LEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHL 419
Query: 180 YVKCGSLVAARELFDRMETR 199
+ G L A L M +
Sbjct: 420 LGRSGKLKEAYRLVKEMHVK 439
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 255/488 (52%), Gaps = 36/488 (7%)
Query: 52 EGESVHCVVRKLGFDSELLVRNGLIHFYA---DRGWLKHAREVFDESSLKDVVTWTTMFD 108
E + H + K G + + L+ F A + + +A + + + T ++
Sbjct: 54 EIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIR 113
Query: 109 GYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRC 168
YA+ + E+A+ +F ML G V P++ + VL AC+ E GR++H K +
Sbjct: 114 AYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVT 173
Query: 169 SLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTS---------------------- 206
+ + N L+++Y + G AR++ DRM RD SW S
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 207 ---------MVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHE 257
M++GYA G ++ A+ D P ++VVSW+AM+ Y+ E L++F++
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNK 293
Query: 258 MMGAGV-VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
M+ P+ LVSVLSAC L L+ G W+H ++ + G+ LA A++DMY+KC
Sbjct: 294 MLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV-YIDKHGIEIEGFLATALVDMYSKC 352
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G I+ A EVF A S+R++ +WNS+I+ + +G K A+ +F +M GFKP+ ITF+ +L
Sbjct: 353 GKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVL 412
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
+AC+H G++ + ++ F M Y ++P EHY CM+DLLGR G ++EA EL+ +P
Sbjct: 413 SACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA 472
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
+LL AC+ G +E A A LL L+ DS Y ++N+ A++ +W V R
Sbjct: 473 SILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRN 532
Query: 497 MRDKGVKK 504
MR + V +
Sbjct: 533 MRAERVNR 540
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/511 (30%), Positives = 262/511 (51%), Gaps = 39/511 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI Y ++ A + F M VE+ + + LS E +HC+V
Sbjct: 220 WNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII------NLLSAHVSHEPLHCLVV 273
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G +++ V L+ Y+ G L A ++ + +V T++ YA + ++A+
Sbjct: 274 KCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVV 333
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
F+ + ++ + V L+ +L C + I++G +H K + + N L+ MY
Sbjct: 334 YFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYS 393
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K FD D+E +Q ++SW+++++G
Sbjct: 394 K----------FD---------------------DVETVLFLFEQLQETPLISWNSVISG 422
Query: 242 YSQNNKPKESLKLFHEMM-GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
Q+ + + ++FH+MM G++P+ + S+L+ C QL CLNLG +H + +
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG-YTLRNNFE 481
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+ A++DMYAKCG+ A VF +I +WNSMI+GY+ +G +A++ + +M
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
R G KPD+ITF+ +L+AC+HGG + EG+ F M + +GI P +HY+ M+ LLGR L
Sbjct: 542 REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACL 601
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
EA LI M ++P A WGALL+AC +H +E+ A + LD ++ G+YVL++N+
Sbjct: 602 FTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNL 661
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLV 511
A E W DV RVR++M+D G G S +
Sbjct: 662 YATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 174/410 (42%), Gaps = 42/410 (10%)
Query: 48 SGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMF 107
S + E V + K G D + V+ L++ Y +G + A+ +FDE +D V W +
Sbjct: 64 SFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALI 123
Query: 108 DGYASRNCSEL-AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNM 166
GY SRN E A +LF +ML+ P+ TL+ +L C Q G + GR VH K +
Sbjct: 124 CGY-SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGL 182
Query: 167 RCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQ 226
+ NAL+ Y KC L +A LF M+ + SW +M+ Y
Sbjct: 183 ELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAY--------------- 227
Query: 227 TPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLG 286
SQ+ +E++ +F M V ++++LSA ++
Sbjct: 228 ----------------SQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA-------HVS 264
Query: 287 HWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAA 346
H V++ GM +++ +++ Y++CG + +A ++ + + ++V S+++ YA
Sbjct: 265 HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAE 324
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE 406
G AV F + R + K D + V +L C I G + G+ K
Sbjct: 325 KGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS-LHGYAIKSGLCTKTL 383
Query: 407 HYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
+ +I + + ++ L + P +W ++++ C G A
Sbjct: 384 VVNGLITMYSKFDDVETVLFLFEQLQETPL-ISWNSVISGCVQSGRASTA 432
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 18/255 (7%)
Query: 227 TPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACG-QLSCLNL 285
T ++++ + ++L + +F +++ + + P + L A + L
Sbjct: 8 TLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKL 67
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYA 345
Q + + G+ V + ++L++Y K G + +A +F+ + ER+ V WN++I GY+
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
NG A +F M GF P T VNLL C G +S+G+ + + G++
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS-VHGVAAKSGLELDS 186
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG-------------- 451
+ + +I + L A L M + +W ++ A G
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKS-TVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 452 -NVELARLSACNLLS 465
NVE++ ++ NLLS
Sbjct: 246 KNVEISPVTIINLLS 260
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 252/471 (53%), Gaps = 43/471 (9%)
Query: 37 FVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESS 96
F L+ C L G VH ++ + L + + L+ YA G+ + A EVFD S
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 97 LKD--VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
+D W ++ GYA E AM L+ M V+P+ T VL AC +G +++G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
+H ++ K+ + + NAL+ MY AKC
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMY-------------------------------AKC 243
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVL 274
GD+ AR D PHK+ VSW++ML GY + E+L +F M+ G+ P++ A+ SVL
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303
Query: 275 SACGQLSCLNLGHWIHQH-FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERN 333
+ L+ H H +VI +GM +++ANA++ +Y+K G + A +F+ + ER+
Sbjct: 304 A-----RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERD 358
Query: 334 LVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFY 393
VSWN++I+ ++ N + F+QM KPD ITFV++L+ C++ G++ +G+ F
Sbjct: 359 TVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFS 415
Query: 394 TMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITS-MPMQPCEAAWGALLNACRMHGN 452
M + YGI PK EHY+CM++L GR G+++EAY +I M ++ WGALL AC +HGN
Sbjct: 416 LMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGN 475
Query: 453 VELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVK 503
++ ++A L L+P++ + LL I + ++ DV+RVR +M D+G++
Sbjct: 476 TDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 150/321 (46%), Gaps = 37/321 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN++I GY + A + + +M V+ D +F LKAC + GE++H +
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLV 222
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K GF ++ V N L+ YA G + AR VFD KD V+W +M GY A++
Sbjct: 223 KEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALD 282
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F LM++ +EP++V + +VL +++ + GR++H + ++ M L++ NAL+ +Y
Sbjct: 283 IFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYS 339
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K G L A +FD+M RD SW ++++ ++K +
Sbjct: 340 KRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN------------------------- 374
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
LK F +M A P+ VSVLS C + G + E G+ P
Sbjct: 375 ---------GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 302 SVTLANAILDMYAKCGSIEAA 322
+ ++++Y + G +E A
Sbjct: 426 KMEHYACMVNLYGRAGMMEEA 446
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 257/472 (54%), Gaps = 13/472 (2%)
Query: 49 GDFEGE-SVHCVVRKLGFDSELLVRNGLIHFYADRG-WLKHAREVFDESSLKDVVTWTTM 106
GD EG +HC+ K GF+ E+ V L+ Y+ G W+ AR +F++ K VVT+
Sbjct: 143 GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAAR-MFEKVPHKSVVTYNAF 201
Query: 107 FDGYASRNCSELAMELFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN 165
G L +FNLM + EPN+VT + ++AC+ + +++ GR++H + KK
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 166 MRCSLNLHNALLDMYVKCGSLVAARELFDRM-ETRDVFSWTSMVNGYAKCGDLENARRFL 224
+ + AL+DMY KC +A +F + +TR++ SW S+++G G E A
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 225 DQTPHKNV----VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQL 280
++ + + +W+++++G+SQ K E+ K F M+ +VP L S+LSAC +
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDI 381
Query: 281 SCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI--SERNLVSWN 338
L G IH H VI+ + + +++DMY KCG A +F+ ++ V WN
Sbjct: 382 WTLKNGKEIHGH-VIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWN 440
Query: 339 SMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERN 398
MI+GY +G+ + A+ +F+ +R +P TF +L+ACSH G + +G + F M+
Sbjct: 441 VMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEE 500
Query: 399 YGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARL 458
YG KP EH CMIDLLGR+G L+EA E+I M +LL +CR H + L
Sbjct: 501 YGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEE 559
Query: 459 SACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSL 510
+A L L+PE+ +V+L++I A +W DV+ +R ++ K + K+PG SL
Sbjct: 560 AAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 163/362 (45%), Gaps = 37/362 (10%)
Query: 36 SFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDES 95
+F LK+C +L +G +H V K GF ++ L+ Y + A +V DE
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 96 SLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGR 155
+ + + G A +F N VT+ +VL C GDIE G
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGM 149
Query: 156 RVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCG 215
++H K + + +L+ MY +CG V A +F+++
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKV------------------- 190
Query: 216 DLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG-AGVVPEEHALVSVL 274
PHK+VV+++A ++G +N +F+ M + P + V+ +
Sbjct: 191 ------------PHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAI 238
Query: 275 SACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE-RN 333
+AC L L G +H V++K + A++DMY+KC ++A VF + + RN
Sbjct: 239 TACASLLNLQYGRQLH-GLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRN 297
Query: 334 LVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFY 393
L+SWNS+I+G NGQ + AV +F+++ G KPD T+ +L++ S G + E ++F
Sbjct: 298 LISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFE 357
Query: 394 TM 395
M
Sbjct: 358 RM 359
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 153/337 (45%), Gaps = 10/337 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVE-MDCRSFVFALKACEELSGDFEGESVHCVV 60
+N I G + N+ S F M + E + +FV A+ AC L G +H +V
Sbjct: 198 YNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLV 257
Query: 61 RKLGFDSELLVRNGLIHFYAD-RGWLKHAREVFDE-SSLKDVVTWTTMFDGYASRNCSEL 118
K F E +V LI Y+ R W K A VF E +++++W ++ G E
Sbjct: 258 MKKEFQFETMVGTALIDMYSKCRCW-KSAYIVFTELKDTRNLISWNSVISGMMINGQHET 316
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+ELF + ++P+ T +++S SQ+G + + E M M SL +LL
Sbjct: 317 AVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLS 376
Query: 179 MYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARRFLD--QTPHKNV 232
+L +E+ + RD+F TS+++ Y KCG ARR D + K+
Sbjct: 377 ACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDP 436
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
V W+ M++GY ++ + + ++++F + V P +VLSAC + G I +
Sbjct: 437 VFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRL 496
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
E G PS ++D+ + G + A EV + +
Sbjct: 497 MQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 293/553 (52%), Gaps = 42/553 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRH-RVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
W+ +IR Y +++ P + F M+ + E DC + LKAC + G SVH
Sbjct: 193 WSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFS 252
Query: 61 RKLGFD-SELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ GFD +++ V N LI Y+ + A VFDE++ +++V+W ++ G+ + A
Sbjct: 253 IRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEA 312
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+E+F+LM++ VE +EVT++++L C ++ + C ++H ++
Sbjct: 313 LEMFHLMVQEAVEVDEVTVVSLLRVC--------------KFFEQPLPCK-SIHGVII-- 355
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
R ++ E + +S+++ Y C +++A LD +K+VVS S M+
Sbjct: 356 ----------RRGYESNEV----ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
+G + + E++ +F M P ++S+L+AC + L W H +
Sbjct: 402 SGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLA 458
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+++ +I+D YAKCG+IE A F+ I+E+N++SW +I+ YA NG +A+ +FD+
Sbjct: 459 INDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDE 518
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM-ERNYGIKPKREHYSCMIDLLGRT 418
M+ G+ P+ +T++ L+AC+HGGL+ +G F +M E ++ KP +HYSC++D+L R
Sbjct: 519 MKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH--KPSLQHYSCIVDMLSRA 576
Query: 419 GLLKEAYELITSMP--MQPCEAAWGALLNACR-MHGNVELARLSACNLLSLDPEDSGIYV 475
G + A ELI ++P ++ +AWGA+L+ CR + + +L L+P S Y+
Sbjct: 577 GEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYL 636
Query: 476 LLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYK 535
L ++ A E+ W DV +R L++++ V+ + G+S+V K FL D+ E+
Sbjct: 637 LASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELND 696
Query: 536 VLDEIFLSSELED 548
V+ + +L+D
Sbjct: 697 VVQSLHRCMKLDD 709
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 201/488 (41%), Gaps = 98/488 (20%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W ++ GY + + + F+ D F KAC +LS F+G
Sbjct: 25 WREVVSGYSEIQRAGVQFN------------DPFVFPIVFKACAKLSWLFQG-------- 64
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
N + FY G L FD + +D V+W + G E +
Sbjct: 65 -----------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
F+ + EPN TL+ V+ AC + G ++H + + ++ N++L MY
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYA 171
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
SL +AR+LFD M ++V+SWS ++
Sbjct: 172 DSDSL-SARKLFDEMS-------------------------------ERDVISWSVVIRS 199
Query: 242 YSQNNKPKESLKLFHEMMG-AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
Y Q+ +P LKLF EM+ A P+ + SVL AC + +++G +H F I +G
Sbjct: 200 YVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHG-FSIRRGFD 258
Query: 301 -PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
V + N+++DMY+K +++A VF+ + RN+VSWNS++AG+ N + +A+ +F
Sbjct: 259 LADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHL 318
Query: 360 MRCMGFKPDDITFVNLLTACS-----------HGGLISEGQEY----------FYT---M 395
M + D++T V+LL C HG +I G E YT +
Sbjct: 319 MVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSL 378
Query: 396 ERNYGIKPKREHY------SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRM 449
+ G Y S MI L G EA + M P +LLNAC +
Sbjct: 379 VDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSV 438
Query: 450 HGNVELAR 457
++ ++
Sbjct: 439 SADLRTSK 446
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 30/163 (18%)
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGV-VPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
S+ + S + K +E + + E+ AGV + V AC +LS W+ Q
Sbjct: 13 SSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLS------WLFQ--- 63
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
N+I D Y KCG + + F+ ++ R+ VSWN ++ G G ++ +
Sbjct: 64 -----------GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGL 112
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACS---------HGGLISEG 388
F ++R GF+P+ T V ++ AC HG +I G
Sbjct: 113 WWFSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSG 155
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 262/512 (51%), Gaps = 44/512 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W+ MI Y +A + A S F M+R ++ + + L+ C ++ G+S+HC
Sbjct: 369 WSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI 428
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K +SEL +I YA G A + F+ +KD V + + GY + A +
Sbjct: 429 KADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFD 488
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
++ M V P+ T++ +L C+ D G V+ + K ++ +AL++M+
Sbjct: 489 VYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFT 548
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KC +L AA LFD KCG K+ VSW+ M+ G
Sbjct: 549 KCDALAAAIVLFD------------------KCG------------FEKSTVSWNIMMNG 578
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y + + +E++ F +M P V+++ A +LS L +G +H +I+ G
Sbjct: 579 YLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS-LIQCGFCS 637
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
+ N+++DMYAKCG IE++ + F IS + +VSWN+M++ YAA+G A AV++F M+
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
KPD ++F+++L+AC H GL+ EG+ F M + I+ + EHY+CM+DLLG+ GL
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLF 757
Query: 422 KEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANIC 481
EA E++ M ++ WGALLN+ RMH N+ L+ + C L+ L+P + Y
Sbjct: 758 GEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY------- 810
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
+ +R+ G+V V +KK+P S +EV
Sbjct: 811 SQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 218/436 (50%), Gaps = 38/436 (8%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFE-GESVHC 58
+WN+MIRGY +A A +F M + ++ D SF FALKAC S DF+ G +H
Sbjct: 66 LWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG-SMDFKKGLRIHD 124
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
++ ++G +S++ + L+ Y L AR+VFD+ +KDVVTW TM G A CS
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+ LF+ M V+ + V+L ++ A S++ ++ R +H + KK + + + L+D
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLID 242
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
MY C L AA +F+ + +D SW +M
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTM------------------------------- 271
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+A Y+ N +E L+LF M V + A S L A + L G IH + +++G
Sbjct: 272 MAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHD-YAVQQG 330
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
+ V++A +++ MY+KCG +E A ++F I +R++VSW++MIA Y GQ +A+++F
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
M + KP+ +T ++L C+ G S + + I+ + E + +I + +
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCA-GVAASRLGKSIHCYAIKADIESELETATAVISMYAKC 449
Query: 419 GLLKEAYELITSMPMQ 434
G A + +P++
Sbjct: 450 GRFSPALKAFERLPIK 465
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 136/296 (45%), Gaps = 35/296 (11%)
Query: 67 SELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLM 126
S L N LI+ Y+ +R +FD VV W +M GY A+ F M
Sbjct: 31 SGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYM 90
Query: 127 LR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGS 185
++P++ + L AC+ D + G R+H+
Sbjct: 91 SEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD-------------------------- 124
Query: 186 LVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQN 245
L+A L DV+ T++V Y K DL +AR+ D+ K+VV+W+ M++G +QN
Sbjct: 125 LIAEMGL-----ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQN 179
Query: 246 NKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTL 305
+L LFH+M V + +L +++ A +L ++ +H VI+KG
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHG-LVIKKGF--IFAF 236
Query: 306 ANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
++ ++DMY C + AA VF + ++ SW +M+A YA NG ++ + +FD MR
Sbjct: 237 SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 35/240 (14%)
Query: 162 EKKNMRCSLNLHNALLDMYVKC-GSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENA 220
E KN RC L +H +L+ +K L+ A LF R + +
Sbjct: 14 ECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDL---------------------S 52
Query: 221 RRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG-AGVVPEEHALVSVLSACGQ 279
R D VV W++M+ GY++ +E+L F M G+ P++++ L AC
Sbjct: 53 RVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG 112
Query: 280 LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNS 339
G IH + E G+ V + A+++MY K + +A +VF+ + +++V+WN+
Sbjct: 113 SMDFKKGLRIHD-LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 340 MIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA-----------CSHGGLISEG 388
M++G A NG + A+ +F MR D ++ NL+ A C HG +I +G
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 213/352 (60%), Gaps = 7/352 (1%)
Query: 207 MVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG-AGVVP 265
++ K G+ A++ L +NV++W+ M+ GY +N + +E+LK M+ + P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 266 EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
+ + S L+AC +L L+ W+H +I+ G+ + L++A++D+YAKCG I + EV
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHS-LMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 326 FNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
F ++ ++ WN+MI G+A +G A +A+ VF +M PD ITF+ LLT CSH GL+
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 386 SEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLN 445
EG+EYF M R + I+PK EHY M+DLLGR G +KEAYELI SMP++P W +LL+
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Query: 446 ACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKI 505
+ R + N EL ++ N L SG YVLL+NI ++ +KW ++VR LM +G++K
Sbjct: 343 SSRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Query: 506 PGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDY--DTDIFV 555
G S +E G F D SH +++ IYKVL+ + ++ + + DTD+ +
Sbjct: 400 KGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVL 451
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 33/257 (12%)
Query: 88 AREVFDESSLKDVVTWTTMFDGYASRNCSELAME-LFNLMLRGDVEPNEVTLIAVLSACS 146
A++V +S ++V+TW M GY E A++ L N++ D++PN+ + + L+AC+
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 147 QMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTS 206
++GD+ + VH M + + L +AL+D+Y KCG + +RE+F ++ DV W +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 207 MVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPE 266
M+ G+A G LA E++++F EM V P+
Sbjct: 237 MITGFATHG-----------------------LA--------TEAIRVFSEMEAEHVSPD 265
Query: 267 EHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF 326
+ +L+ C L G + P + A++D+ + G ++ A E+
Sbjct: 266 SITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELI 325
Query: 327 NAIS-ERNLVSWNSMIA 342
++ E ++V W S+++
Sbjct: 326 ESMPIEPDVVIWRSLLS 342
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 11/215 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEM-DCR----SFVFALKACEELSGDFEGESV 56
WN MI GY + N+ + L+ L++ + D + SF +L AC L + V
Sbjct: 132 WNLMIGGYVR----NVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWV 187
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
H ++ G + ++ + L+ YA G + +REVF DV W M G+A+ +
Sbjct: 188 HSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLA 247
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNA 175
A+ +F+ M V P+ +T + +L+ CS G +E G+ M ++ +++ L + A
Sbjct: 248 TEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGA 307
Query: 176 LLDMYVKCGSLVAARELFDRMETR-DVFSWTSMVN 209
++D+ + G + A EL + M DV W S+++
Sbjct: 308 MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/519 (34%), Positives = 273/519 (52%), Gaps = 55/519 (10%)
Query: 75 LIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE-- 132
+++ Y G ++ A +F E +++V+WT M G+A A+ LF L ++ DV+
Sbjct: 237 MVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLF-LEMKKDVDAV 295
Query: 133 -PNEVTLIAVLSACSQMGDIEMGRRVHENMEKK--------------------------- 164
PN TLI++ AC +G +E RR+ E + +
Sbjct: 296 SPNGETLISLAYACGGLG-VEF-RRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSG 353
Query: 165 ---------NMRCSLNLHNALLDMYVKCGSLVAARELFDRMET-RDVFSWTSMVNGYAKC 214
N L N +++ Y+K G L A LF+R+++ D SWTSM++GY +
Sbjct: 354 LIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEA 413
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVL 274
GD+ A + K+ V+W+ M++G QN E+ L +M+ G+ P +L
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 275 SACGQLSCLNLGHWIHQHFVIEKGM---HPSVTLANAILDMYAKCGSIEAAAEVFNAISE 331
S+ G S L+ G H H VI K P + L N+++ MYAKCG+IE A E+F + +
Sbjct: 474 SSAGATSNLDQGK--HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 332 RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEY 391
++ VSWNSMI G + +G A +A+N+F +M G KP+ +TF+ +L+ACSH GLI+ G E
Sbjct: 532 KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 392 FYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
F M+ Y I+P +HY MIDLLGR G LKEA E I+++P P +GALL C ++
Sbjct: 592 FKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNW 651
Query: 452 NVE----LARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPG 507
+ +A +A LL LDP ++ +V L N+ A + K +R M KGVKK PG
Sbjct: 652 RDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPG 711
Query: 508 HSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSEL 546
S V V+G FL D+S + E +++ IF +E+
Sbjct: 712 CSWVVVNGRANVFLSGDKS---ASEAAQMVLPIFCGNEM 747
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 199/415 (47%), Gaps = 42/415 (10%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE 132
N ++ Y + A +F E K+VV+WT M SE A+ELF+ M E
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEM----PE 166
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
N V+ +++ + GD+E ++V + M +++ NA++ Y++ + A+ L
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS----WNAMIKGYIENDGMEEAKLL 222
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
F M ++V +WTSMV GY + GD+ A R + P +N+VSW+AM++G++ N +E+L
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 282
Query: 253 KLFHEMMG--AGVVPEEHALVSVLSACGQLSC--LNLGHWIHQHFVIEKGMHP---SVTL 305
LF EM V P L+S+ ACG L LG +H VI G L
Sbjct: 283 MLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQ-VISNGWETVDHDGRL 341
Query: 306 ANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGF 365
A +++ MYA G I +A + N +L S N +I Y NG ++A +F++++ +
Sbjct: 342 AKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKSL-- 397
Query: 366 KPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAY 425
D +++ +++ G +S F + G+ ++ MI L + L EA
Sbjct: 398 -HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMISGLVQNELFAEAA 451
Query: 426 ELITSM---PMQPCEAAWGALLNACRMHGNVE--------LARLSACNLLSLDPE 469
L++ M ++P + + LL++ N++ +A+ +AC DP+
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTAC----YDPD 502
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 161 MEKKNMRCSLN---LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDL 217
++K R S+N +LL Y K G L AR LF+ M R++ + +M+ GY KC +
Sbjct: 65 LDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRM 124
Query: 218 ENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC 277
A + P KNVVSW+ ML + + +++++LF EM VV + LV+ L
Sbjct: 125 NEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV-SWNTLVTGLIRN 182
Query: 278 GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSW 337
G + V + V NA++ Y + +E A +F +SE+N+V+W
Sbjct: 183 GDME--------KAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTW 234
Query: 338 NSMIAGYAANGQAKQAVNVFDQM 360
SM+ GY G ++A +F +M
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEM 257
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 55/267 (20%)
Query: 184 GSLVAARELFDRMETRD----VFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
G LV AR L D++ R V WTS+++ YAK G L+ AR + P +N+V+ +AML
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
GY + + E+ LF EM P+ N+ W
Sbjct: 116 TGYVKCRRMNEAWTLFREM------PK-----------------NVVSW----------- 141
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+L G E A E+F+ + ERN+VSWN+++ G NG ++A VFD
Sbjct: 142 -------TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDA 194
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M D +++ ++ + E + F M + ++ M+ R G
Sbjct: 195 MP----SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVT-----WTSMVYGYCRYG 245
Query: 420 LLKEAYELITSMPMQPCEAAWGALLNA 446
++EAY L MP + +W A+++
Sbjct: 246 DVREAYRLFCEMPERNI-VSWTAMISG 271
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI G + A S M+R ++ ++ L + S +G+ +HCV+
Sbjct: 434 WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIA 493
Query: 62 KLG--FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K +D +L+++N L+ YA G ++ A E+F + KD V+W +M G + ++ A
Sbjct: 494 KTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKA 553
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLD 178
+ LF ML +PN VT + VLSACS G I G + + M E +++ ++ + +++D
Sbjct: 554 LNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMID 613
Query: 179 MYVKCGSLVAARELFDRM 196
+ + G L A E +
Sbjct: 614 LLGRAGKLKEAEEFISAL 631
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 283 LNLGHWIHQHFVIEK----GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWN 338
L+ G +H +++K G V ++L YAK G ++ A +F + ERN+V+ N
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 339 SMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM-ER 397
+M+ GY + +A +F +M + +++ +LTA G + E F M ER
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPER 167
Query: 398 NYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
N ++ ++ L R G +++A ++ +MP + +W A++ + +E A+
Sbjct: 168 NV------VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV-VSWNAMIKGYIENDGMEEAK 220
Query: 458 L 458
L
Sbjct: 221 L 221
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 248/463 (53%), Gaps = 39/463 (8%)
Query: 52 EGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVF---DESSLKDVVTWTTMFD 108
+G++ H V + F + V N L+ Y L A ++F E K+ W TM
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKE--AWNTMLK 406
Query: 109 GYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRC 168
GY C +ELF + +E + + +V+S+CS +G + +G+ +H + K ++
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 169 SLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP 228
++++ N+L+D+Y K GDL A R +
Sbjct: 467 TISVVNSLIDLY-------------------------------GKMGDLTVAWRMFCEAD 495
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
NV++W+AM+A Y + ++++ LF M+ P LV++L AC L G
Sbjct: 496 -TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQM 554
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG 348
IH+ ++ E +++L+ A++DMYAKCG +E + E+F+A ++++ V WN MI+GY +G
Sbjct: 555 IHR-YITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHG 613
Query: 349 QAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY 408
+ A+ +FDQM KP TF+ LL+AC+H GL+ +G++ F M + Y +KP +HY
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHY 672
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP 468
SC++DLL R+G L+EA + SMP P WG LL++C HG E+ A ++ DP
Sbjct: 673 SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDP 732
Query: 469 EDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLV 511
++ G Y++LAN+ + KW + +R R +MR+ GV K GHS+V
Sbjct: 733 QNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 144/286 (50%), Gaps = 8/286 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTM++GY K + F ++ +E+D S + +C + G+S+HC V
Sbjct: 401 WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV 460
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K D + V N LI Y G L A +F E+ +V+TW M Y SE A+
Sbjct: 461 KTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIA 519
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF+ M+ + +P+ +TL+ +L AC G +E G+ +H + + +L+L AL+DMY
Sbjct: 520 LFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYA 579
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV----VSWSA 237
KCG L +RELFD +D W M++GY GD+E+A DQ +V ++ A
Sbjct: 580 KCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLA 639
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPE-EH--ALVSVLSACGQL 280
+L+ + ++ KLF +M V P +H LV +LS G L
Sbjct: 640 LLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNL 685
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 203/455 (44%), Gaps = 52/455 (11%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN++I+ + + + +F ML D + + AC EL G VH +V
Sbjct: 92 LWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 61 RKLG-FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
K G FD V ++FY+ G+L+ A VFDE +DVV WT + G+ SE
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 120 MELFNLMLRG--DVE-PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
+ M DV+ PN TL ACS +G ++ GR +H K + S + +++
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWS 236
Y K G+ A F + D+FSWTS++ A+ GD+E
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDME------------------ 313
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
ES +F EM G+ P+ + +++ G++ + G H FVI
Sbjct: 314 -------------ESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHG-FVIR 359
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAANGQAKQAVN 355
T+ N++L MY K + A ++F ISE N +WN+M+ GY + +
Sbjct: 360 HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE 419
Query: 356 VFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDL 414
+F +++ +G + D + +++++CSH G + G+ + Y ++ + + + +IDL
Sbjct: 420 LFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV--VNSLIDL 477
Query: 415 LGRTGLLKEAYELITSMPMQPCEA-----AWGALL 444
G+ G L A+ + CEA W A++
Sbjct: 478 YGKMGDLTVAWRMF-------CEADTNVITWNAMI 505
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 8/268 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI Y A + F RM+ + + V L AC G+ +H +
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ + L + LI YA G L+ +RE+FD + KD V W M GY E A+
Sbjct: 561 ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIA 620
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF+ M DV+P T +A+LSAC+ G +E G+++ M + +++ +L ++ L+D+
Sbjct: 621 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLS 680
Query: 182 KCGSLVAARELFDRME-TRDVFSWTSMVNGYAKCGDLE----NARRFLDQTPHKNVVSWS 236
+ G+L A M + D W ++++ G+ E A R + P + +
Sbjct: 681 RSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND--GYY 738
Query: 237 AMLAG-YSQNNKPKESLKLFHEMMGAGV 263
MLA YS K +E+ + M +GV
Sbjct: 739 IMLANMYSAAGKWEEAERAREMMRESGV 766
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 30/329 (9%)
Query: 64 GFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELF 123
G + V + LI YA G + VF + +D+ W ++ + S ++ F
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMYVK 182
ML P+ T V+SAC+++ +G VH + K + + + + Y K
Sbjct: 114 FSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSK 173
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGY 242
CG L A +FD M RDV +WT++++G+ + G+ E +L + M +
Sbjct: 174 CGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK-----------MHSAG 222
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
S +KP L AC L L G +H F ++ G+ S
Sbjct: 223 SDVDKPN-----------------PRTLECGFQACSNLGALKEGRCLHG-FAVKNGLASS 264
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
+ +++ Y+K G+ A F + + ++ SW S+IA A +G +++ ++F +M+
Sbjct: 265 KFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN 324
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEY 391
G PD + L+ L+ +G+ +
Sbjct: 325 KGMHPDGVVISCLINELGKMMLVPQGKAF 353
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 140/304 (46%), Gaps = 23/304 (7%)
Query: 126 MLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRC-SLNLHNALLDMYVKCG 184
MLR ++PN V + LS+ S + R + + +++ SL HNAL + G
Sbjct: 1 MLRRLLKPNLVVTLRKLSSSSAS---YVDRHISVILCDQSLSLESLRKHNAL----IITG 53
Query: 185 SLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQ 244
L + ++F + +++ YA G + R +++ W++++ +
Sbjct: 54 GL-----------SENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFS 102
Query: 245 NNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVT 304
N SL F M+ +G P+ V+SAC +L ++G ++H + G +
Sbjct: 103 NGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTA 162
Query: 305 LANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG 364
+ + + Y+KCG ++ A VF+ + +R++V+W ++I+G+ NG+++ + +M G
Sbjct: 163 VGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAG 222
Query: 365 F---KPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
KP+ T ACS+ G + EG+ +N G+ + S M ++G
Sbjct: 223 SDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN-GLASSKFVQSSMFSFYSKSGNP 281
Query: 422 KEAY 425
EAY
Sbjct: 282 SEAY 285
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 213/339 (62%), Gaps = 3/339 (0%)
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM 259
DV+ +S+V Y G++ENA + ++ P +NVVSW+AM++G++Q + LKL+ +M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 260 GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI 319
+ P ++ ++LSAC L G +H + G+ + ++N+++ MY KCG +
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQ-TLHMGLKSYLHISNSLISMYCKCGDL 272
Query: 320 EAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD-QMRCMGFKPDDITFVNLLTA 378
+ A +F+ S +++VSWNSMIAGYA +G A QA+ +F+ M G KPD IT++ +L++
Sbjct: 273 KDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 379 CSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEA 438
C H GL+ EG+++F M +G+KP+ HYSC++DLLGR GLL+EA ELI +MPM+P
Sbjct: 333 CRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 439 AWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMR 498
WG+LL +CR+HG+V +A L L+P+ + +V LAN+ A+ W + VR LM+
Sbjct: 392 IWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMK 451
Query: 499 DKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
DKG+K PG S +E++ F D S+ + EI VL
Sbjct: 452 DKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVL 490
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 164/332 (49%), Gaps = 38/332 (11%)
Query: 40 ALKACEELSGDFE-GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK 98
A+++C L+ DF G HC+ K GF S++ + + L+ Y D G +++A +VF+E +
Sbjct: 126 AVRSCG-LNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER 184
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
+VV+WT M G+A ++ ++L++ M + +PN+ T A+LSAC+ G + GR VH
Sbjct: 185 NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLE 218
++ L++ N+L+ MY KCG L A +FD+ +DV SW SM+
Sbjct: 245 CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI---------- 294
Query: 219 NARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM-GAGVVPEEHALVSVLSAC 277
AGY+Q+ ++++LF MM +G P+ + VLS+C
Sbjct: 295 ---------------------AGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 278 GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF-NAISERNLVS 336
+ G + + E G+ P + + ++D+ + G ++ A E+ N + N V
Sbjct: 334 RHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVI 392
Query: 337 WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
W S++ +G + ++ R M +PD
Sbjct: 393 WGSLLFSCRVHGDVWTGIRAAEE-RLM-LEPD 422
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 2/209 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI G+ + +I + +M + + + +F L AC +G SVHC
Sbjct: 189 WTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTL 248
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+G S L + N LI Y G LK A +FD+ S KDVV+W +M GYA + A+E
Sbjct: 249 HMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIE 308
Query: 122 LFNLML-RGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
LF LM+ + +P+ +T + VLS+C G ++ GR+ M + ++ LN ++ L+D+
Sbjct: 309 LFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLL 368
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMV 208
+ G L A EL + M + + W S++
Sbjct: 369 GRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 15/260 (5%)
Query: 266 EEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
+ + L S + +CG G H ++ G V L ++++ +Y G +E A +V
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHC-LALKGGFISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 326 FNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
F + ERN+VSW +MI+G+A + + ++ +MR P+D TF LL+AC+ G +
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 386 SEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLN 445
+G+ + + G+K + +I + + G LK+A+ + + +W +++
Sbjct: 238 GQGRS-VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV-VSWNSMIA 295
Query: 446 ACRMHGNVELARLSACNLLSLDPEDSGIY---VLLANICANERKWGDVKRVR---SLMRD 499
HG LA + A L L SG + + ++ R G VK R +LM +
Sbjct: 296 GYAQHG---LA-MQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 500 KGVKKIPGH--SLVEVDGEF 517
G+K H LV++ G F
Sbjct: 352 HGLKPELNHYSCLVDLLGRF 371
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 248/492 (50%), Gaps = 39/492 (7%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
+H + KLGF S+ N L+ Y + AR++FDE +VV+WT++ GY
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 116 SELAMELFNLMLRG-DVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
+ A+ +F M V PNE T +V ACS + + +G+ +H +E +R
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR------- 163
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPH--KNV 232
R++ +S+V+ Y KC D+E ARR D +NV
Sbjct: 164 ------------------------RNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV--PEEHALVSVLSACGQLSCLNLGHWIH 290
VSW++M+ Y+QN + E+++LF A + L SV+SAC L L G H
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
V G + +A ++LDMYAKCGS+ A ++F I +++S+ SMI A +G
Sbjct: 260 G-LVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLG 318
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSC 410
+ AV +FD+M P+ +T + +L ACSH GL++EG EY M YG+ P HY+C
Sbjct: 319 EAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTC 378
Query: 411 MIDLLGRTGLLKEAYELITSMPMQPCEAA--WGALLNACRMHGNVELARLSACNLLSLDP 468
++D+LGR G + EAYEL ++ + + A WGALL+A R+HG VE+ ++ L+ +
Sbjct: 379 VVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQ 438
Query: 469 EDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHP 528
+ + Y+ L+N A W D + +R M+ G K S +E F D S
Sbjct: 439 QVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCD 498
Query: 529 QSEEIYKVLDEI 540
+S EI + L ++
Sbjct: 499 ESGEIERFLKDL 510
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 159/359 (44%), Gaps = 41/359 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFEGESVHCVV 60
W ++I GY P A S F +M R V + +F KAC L+ G+++H +
Sbjct: 98 WTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARL 157
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE--SSLKDVVTWTTMFDGYASRNCSEL 118
G ++V + L+ Y ++ AR VFD ++VV+WT+M YA
Sbjct: 158 EISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHE 217
Query: 119 AMEL---FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
A+EL FN L D N+ L +V+SACS +G ++ G+ H + + + + +
Sbjct: 218 AIELFRSFNAALTSD-RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATS 276
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
LLDMY KCGSL A ++F R+ V S+TSM+ AK G E A
Sbjct: 277 LLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAA--------------- 321
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
+KLF EM+ + P L+ VL AC +N G
Sbjct: 322 ----------------VKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAE 365
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI---SERNLVSWNSMIAGYAANGQAK 351
+ G+ P ++DM + G ++ A E+ I +E+ + W ++++ +G+ +
Sbjct: 366 KYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVE 424
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFA--LKACEELSGDFEGESVHCV 59
W +MI Y + + A F F+ A + AC L G+ H +
Sbjct: 202 WTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGL 261
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
V + G++S +V L+ YA G L A ++F V+++T+M A E A
Sbjct: 262 VTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAA 321
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLD 178
++LF+ M+ G + PN VTL+ VL ACS G + G M EK + + ++D
Sbjct: 322 VKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVD 381
Query: 179 MYVKCGSLVAARELFDRMET---RDVFSWTSMVNGYAKCGDLE---NARRFLDQTPHKNV 232
M + G + A EL +E + W ++++ G +E A + L Q+ +
Sbjct: 382 MLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVT 441
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPE 266
++ A+ Y+ + ++S L EM +G V E
Sbjct: 442 SAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKE 475
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 241/455 (52%), Gaps = 40/455 (8%)
Query: 75 LIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPN 134
L+ FY + G + AR+VFDE +D+ M A + +++ F M + ++ +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 135 EVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFD 194
+ ++L A + D E G+ +H + K + + ++L+DMY K G + AR++F
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 195 RMETRDVFSWTSMVNGYAKCGDLENA------RRFLDQTP-------------------- 228
+ +D+ + +M++GYA + A + L P
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 229 -------------HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLS 275
+VVSW+++++G N + +++ F +M+ G+ P ++++L
Sbjct: 237 VSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 276 ACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLV 335
AC L+ + G IH + V+ G+ + +A+LDMY KCG I A +F ++ V
Sbjct: 297 ACTTLAYMKHGKEIHGYSVV-TGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM 395
++NSMI YA +G A +AV +FDQM G K D +TF +LTACSH GL GQ F M
Sbjct: 356 TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLM 415
Query: 396 ERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVEL 455
+ Y I P+ EHY+CM+DLLGR G L EAYE+I +M M+P WGALL ACR HGN+EL
Sbjct: 416 QNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMEL 475
Query: 456 ARLSACNLLSLDPEDSGIYVLLANICANERKWGDV 490
AR++A +L L+PE+SG +LL ++ AN W V
Sbjct: 476 ARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W ++I G AF F +ML H + + + + L AC L+ G+ +H
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV 315
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G + VR+ L+ Y G++ A +F ++ K VT+ +M YA+ ++ A+E
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVE 375
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMY 180
LF+ M + + +T A+L+ACS G ++G+ + M+ K + L + ++D+
Sbjct: 376 LFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLL 435
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENAR 221
+ G LV A E+ M D+F W +++ G++E AR
Sbjct: 436 GRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELAR 477
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 36/299 (12%)
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL----KDVVTWTTMFDGYASRNC 115
++ LG +++ N LI ++ + E+ + L DVV+WT++ G
Sbjct: 209 MKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQ 268
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
+E A + F ML + PN T+I +L AC+ + ++ G+ +H + + +A
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSA 328
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
LLDMY KCG + A LF + + ++ SM+ YA G + A
Sbjct: 329 LLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKA--------------- 373
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
++LF +M G + ++L+AC +LG +
Sbjct: 374 ----------------VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQN 417
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQAKQA 353
+ + P + ++D+ + G + A E+ A+ E +L W +++A +G + A
Sbjct: 418 KYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 150/506 (29%), Positives = 254/506 (50%), Gaps = 36/506 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +I G+ +P A + +RM R + +D + LKAC G+ +HC V
Sbjct: 207 WNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVV 265
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL---KDVVTWTTMFDGYASRNCSEL 118
K G +S + LI Y++ G L +A +VF + L V W +M G+ +E
Sbjct: 266 KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEA 325
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+ L + + D+ + TL L C ++ +G +VH +
Sbjct: 326 ALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV----------------- 368
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
+V+ EL D + +V+ +A G++++A + + P+K+++++S +
Sbjct: 369 -------VVSGYEL-------DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+ G ++ + LF E++ G+ ++ + ++L C L+ L G IH I+KG
Sbjct: 415 IRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHG-LCIKKG 473
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
A A++DMY KCG I+ +F+ + ER++VSW +I G+ NG+ ++A F
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M +G +P+ +TF+ LL+AC H GL+ E + TM+ YG++P EHY C++DLLG+
Sbjct: 534 KMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQA 593
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
GL +EA ELI MP++P + W +LL AC H N L + A LL P+D +Y L+
Sbjct: 594 GLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLS 653
Query: 479 NICANERKWGDVKRVRSLMRDKGVKK 504
N A W + +VR + G K+
Sbjct: 654 NAYATLGMWDQLSKVREAAKKLGAKE 679
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 238/499 (47%), Gaps = 31/499 (6%)
Query: 32 MDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREV 91
MD + L+ C ++ GES+ V K G + + N +I Y D L A +V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 92 FDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEP-NEVTLIAVLSACSQMGD 150
FDE S +++VTWTTM GY S A+EL+ ML + E NE AVL AC +GD
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNG 210
I++G V+E + K+N+R + L N+++DMYVK G L+ A F + SW ++++G
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 211 YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
Y K G ++ A + P NVVSW+ +++G+ P+ +L+ M G+V + AL
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFAL 241
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA-- 328
L AC L +G +H V++ G+ S +A++DMY+ CGS+ AA+VF+
Sbjct: 242 PCGLKACSFGGLLTMGKQLH-CCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 329 -ISERNLVSWNSMIAGYAANG----------QAKQAVNVFDQMRCMGFKPDDITFVNL-L 376
++ WNSM++G+ N Q Q+ FD G I +VNL L
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
H ++ G E Y + S ++DL G +++A++L +P +
Sbjct: 361 GLQVHSLVVVSGYELDYIVG------------SILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPE-DSGIYVLLANICANERKWGDVKRVRS 495
A+ L+ C G LA L+ L + D I + +C++ G K++
Sbjct: 409 -IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHG 467
Query: 496 LMRDKGVKKIPGHSLVEVD 514
L KG + P + VD
Sbjct: 468 LCIKKGYESEPVTATALVD 486
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 167/387 (43%), Gaps = 37/387 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN+M+ G+ A L++ + + D + ALK C G VH +V
Sbjct: 309 VWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
G++ + +V + L+ +A+ G ++ A ++F KD++ ++ + G + LA
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAF 428
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
LF +++ ++ ++ + +L CS + + G+++H KK AL+DMY
Sbjct: 429 YLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMY 488
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
VKCG + LFD M RDV SWT ++ G+
Sbjct: 489 VKCGEIDNGVVLFDGMLERDVVSWTGIIVGFG---------------------------- 520
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
QN + +E+ + FH+M+ G+ P + + +LSAC L + E G+
Sbjct: 521 ---QNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLE 577
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQAKQA--VNVF 357
P + ++D+ + G + A E+ N + E + W S++ A G K A V V
Sbjct: 578 PYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLL---TACGTHKNAGLVTVI 634
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGL 384
+ GF D + +L A + G+
Sbjct: 635 AEKLLKGFPDDPSVYTSLSNAYATLGM 661
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 214/522 (40%), Gaps = 97/522 (18%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFA--LKACEELSGDFE-GESVHC 58
W TM+ GY PN A + RML E F+++ LKAC L GD + G V+
Sbjct: 74 WTTMVSGYTSDGKPNKAIELYRRMLDSE-EEAANEFMYSAVLKAC-GLVGDIQLGILVYE 131
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGY-------- 110
+ K ++++ N ++ Y G L A F E +W T+ GY
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 111 -------------ASRNC---------SELAMELFNLMLRGDVEPNEVTLIAVLSACSQM 148
S NC S A+E M R + + L L ACS
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 149 GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV 208
G + MG+++H + K + S +AL+DMY CGSL+ A ++F + +
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL---------- 301
Query: 209 NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEH 268
+ +V W++ML+G+ N + + +L L ++ + + + +
Sbjct: 302 ------------------AVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSY 343
Query: 269 ALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
L L C L LG +H V+ G + + ++D++A G+I+ A ++F+
Sbjct: 344 TLSGALKICINYVNLRLGLQVHS-LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHR 402
Query: 329 ISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS-------- 380
+ +++++++ +I G +G A +F ++ +G D N+L CS
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 381 ---HGGLISEGQE------------YFYTMERNYGI-------KPKREHYSCMIDLLGRT 418
HG I +G E Y E + G+ + ++ +I G+
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN 522
Query: 419 GLLKEAYELITSM---PMQPCEAAWGALLNACRMHGNVELAR 457
G ++EA+ M ++P + + LL+ACR G +E AR
Sbjct: 523 GRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEAR 564
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 178/616 (28%), Positives = 294/616 (47%), Gaps = 84/616 (13%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHR----VEMDCRSFVFALKACEELSGDFEGESVH 57
+N + Y +RNP+ A SY + H V+ + +F ++ C L G S++
Sbjct: 166 YNALYSAY--SRNPDFA-SYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLN 222
Query: 58 CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
+ KLG+ ++V+ ++ Y+ G L+ AR +FD + +D V W TM G + E
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
+ F ML V+P + T VL+ CS++G +G+ +H + + L L NALL
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALL 342
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENA----RRFLD-QTPHKNV 232
DMY CG + A +F R+ ++ SW S+++G ++ G E A RR L TP +
Sbjct: 343 DMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDE 402
Query: 233 VSWSA-----------------------------------MLAGYSQNNKPKESLKLFHE 257
++SA +L+ Y +N + + + K+F
Sbjct: 403 YTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDV 462
Query: 258 MMGAGVV-------------------------------PEEHALVSVLSACGQLSCLNLG 286
M VV + +L SV+ AC ++ L G
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG 522
Query: 287 HWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAA 346
H I G +++ A++DMY K G E A +F+ S +L WNSM+ Y+
Sbjct: 523 EVFH-CLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQ 581
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE 406
+G ++A++ F+Q+ GF PD +T+++LL ACSH G +G+ + + + GIK +
Sbjct: 582 HGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK-FLWNQMKEQGIKAGFK 640
Query: 407 HYSCMIDLLGRTGLLKEAYELITSMPMQPCEAA-WGALLNACRMHGNVELARLSACNLLS 465
HYSCM++L+ + GL+ EA ELI P +A W LL+AC N+++ +A +L
Sbjct: 641 HYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILK 700
Query: 466 LDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKE-FLVAD 524
LDPED+ ++LL+N+ A +W DV +R +R K PG S +EV+ + F D
Sbjct: 701 LDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGD 760
Query: 525 ESHPQSEEIYKVLDEI 540
+S+P E + + DE+
Sbjct: 761 QSNP--EVVSQAQDEL 774
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 162/322 (50%), Gaps = 42/322 (13%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRN--CSELAMELFNLMLRGD 130
N LI Y G L+ AR+VFD+ ++VV++ ++ Y SRN + A L M
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY-SRNPDFASYAFPLTTHMAFEY 194
Query: 131 VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAR 190
V+PN T +++ C+ + D+ MG ++ + +K G
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQI-------------------IKLG------ 229
Query: 191 ELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKE 250
+ +V TS++ Y+ CGDLE+ARR D +++ V+W+ M+ G +N+K ++
Sbjct: 230 ------YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIED 283
Query: 251 SLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAIL 310
L F M+ +GV P + VL+ C +L +LG IH ++ + + L NA+L
Sbjct: 284 GLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL-ADLPLDNALL 342
Query: 311 DMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ-MRCMGFKPDD 369
DMY CG + A VF I NLVSWNS+I+G + NG +QA+ ++ + +R +PD+
Sbjct: 343 DMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDE 402
Query: 370 ITFVNLLTACS------HGGLI 385
TF ++A + HG L+
Sbjct: 403 YTFSAAISATAEPERFVHGKLL 424
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 189/418 (45%), Gaps = 40/418 (9%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTW---TTMFDGYASRNCS--ELAMELFNLML 127
N LI Y L+ AR+VFD+ +++VT + +F+ Y S S ++L + +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFE-YVSMGSSLHSQIIKLGSFQM 84
Query: 128 RGDVEPNEV--TLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGS 185
+ NE+ +++ + C + ++ R++H + + G+
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHA-------------------LVLTAGA 125
Query: 186 LVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQN 245
A T ++ ++++ Y +CG LE AR+ D+ PH+NVVS++A+ + YS+N
Sbjct: 126 GAA---------TESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRN 176
Query: 246 -NKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVT 304
+ + L M V P S++ C L + +G ++ +I+ G +V
Sbjct: 177 PDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQ-IIKLGYSDNVV 235
Query: 305 LANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG 364
+ ++L MY+ CG +E+A +F+ ++ R+ V+WN+MI G N + + + F M G
Sbjct: 236 VQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
Query: 365 FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEA 424
P T+ +L CS G S G+ + + + + ++D+ G ++EA
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD-NALLDMYCSCGDMREA 354
Query: 425 YELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICA 482
+ + + P +W ++++ C +G E A L LL + Y A I A
Sbjct: 355 FYVFGRI-HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+W MI G+ + N +A +F+ M R + D S + AC +++ +GE HC+
Sbjct: 470 LWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLA 529
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ GFD + V L+ Y G + A +F +S D+ W +M Y+ E A+
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
F +L P+ VT +++L+ACS G G+ + M+++ ++ ++ ++++
Sbjct: 590 SFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLV 649
Query: 181 VKCGSLVAARELFDR 195
K G + A EL ++
Sbjct: 650 SKAGLVDEALELIEQ 664
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 175/600 (29%), Positives = 289/600 (48%), Gaps = 54/600 (9%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV--V 60
N+++ Y K + A +F RM R R + S + A C+ +G E E+V V +
Sbjct: 220 NSILAVYAKCGELDFATKFFRRM-RERDVIAWNSVLLAY--CQ--NGKHE-EAVELVKEM 273
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL----KDVVTWTTMFDGYASRNCS 116
K G L+ N LI Y G A ++ + DV TWT M G
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
A+++F M V PN VT+++ +SACS + I G VH K + + N+L
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENA----RRFLDQTPHKNV 232
+DMY KCG L AR++FD ++ +DV++W SM+ GY + G A R D N+
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 233 VSWSAML------------------------------------AGYSQNNKPKESLKLFH 256
++W+ M+ AGY QN K E+L+LF
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
+M + +P ++S+L AC L + IH V+ + + + NA+ D YAK
Sbjct: 514 KMQFSRFMPNSVTILSLLPACANLLGAKMVREIHG-CVLRRNLDAIHAVKNALTDTYAKS 572
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G IE + +F + +++++WNS+I GY +G A+ +F+QM+ G P+ T +++
Sbjct: 573 GDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
A G + EG++ FY++ +Y I P EH S M+ L GR L+EA + I M +Q
Sbjct: 633 LAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSE 692
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
W + L CR+HG++++A +A NL SL+PE++ +++ I A K G
Sbjct: 693 TPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKP 752
Query: 497 MRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIF-LSSELEDYDTDIFV 555
RD +KK G S +EV F D+S ++ +Y +++++ L + + Y+ ++++
Sbjct: 753 RRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWI 812
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 227/500 (45%), Gaps = 65/500 (13%)
Query: 9 YRKARNPNI----AFSYFLR-------------MLRHRVEMDCRSFVFALKACEELSGDF 51
+ K + PNI F Y R + + ++ +++ L++C +
Sbjct: 39 FTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIH 98
Query: 52 EGESVHCVVRKLGFDSE--LLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDG 109
G +H + G +E + V L+ YA G + AR+VFD +++ TW+ M
Sbjct: 99 LGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGA 155
Query: 110 YASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS 169
Y+ N +LF LM++ V P++ +L C+ GD+E G+ +H + K M
Sbjct: 156 YSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC 215
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPH 229
L + N++L +Y KCG L A + F RM RDV +W S++ Y + G E A + +
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 230 K---------------------------------------NVVSWSAMLAGYSQNNKPKE 250
+ +V +W+AM++G N +
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 251 SLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAIL 310
+L +F +M AGVVP ++S +SAC L +N G +H ++ G V + N+++
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS-IAVKMGFIDDVLVGNSLV 394
Query: 311 DMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
DMY+KCG +E A +VF+++ +++ +WNSMI GY G +A +F +M+ +P+ I
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITS 430
T+ +++ G E + F ME++ ++ ++ +I + G EA EL
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 431 MPMQ---PCEAAWGALLNAC 447
M P +LL AC
Sbjct: 515 MQFSRFMPNSVTILSLLPAC 534
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 173/425 (40%), Gaps = 82/425 (19%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-GESVHCVV 60
W+ MI Y + F M++ V D F L+ C GD E G+ +H VV
Sbjct: 149 WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN-CGDVEAGKVIHSVV 207
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
KLG S L V N ++ YA G L A + F +DV+ W ++ Y E A+
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAV 267
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
EL M + + P VT ++ +Q+G + + + ME + + A++
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 181 VKCGSLVAARELFDRM---------------------------------------ETRDV 201
+ G A ++F +M DV
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
S+V+ Y+KCG LE+AR+ D +K+V +W++M+ GY Q ++ +LF M A
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
+ P N+ W N ++ Y K G
Sbjct: 448 NLRP------------------NIITW------------------NTMISGYIKNGDEGE 471
Query: 322 AAEVFNAIS-----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
A ++F + +RN +WN +IAGY NG+ +A+ +F +M+ F P+ +T ++LL
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 377 TACSH 381
AC++
Sbjct: 532 PACAN 536
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +I GY + + A F +M R + + + L AC L G +H V
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ D+ V+N L YA G ++++R +F KD++TW ++ GY A+
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALA 611
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMY 180
LFN M + PN TL +++ A MG+++ G++V ++ ++ +L +A++ +Y
Sbjct: 612 LFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY 671
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENA 220
+ L A + M + + W S + G GD++ A
Sbjct: 672 GRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA 712
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 235/420 (55%), Gaps = 8/420 (1%)
Query: 95 SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAV-LSACSQMGDIEM 153
SS +++ T YA++ E A+ LF M P + + ++ L +C+ +
Sbjct: 7 SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66
Query: 154 GRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAK 213
G VH + K N + + ALLDMY KC S+ AR+LFD + R+ W +M++ Y
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 214 CGDLENARRF---LDQTPHKNVVSWSAMLAGY-SQNNKPKESLKLFHEMMGAGVVPEEHA 269
CG ++ A +D P+++ S++A++ G + +++ + +M+ P
Sbjct: 127 CGKVKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLIT 184
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
L++++SAC + L IH + + P L + +++ Y +CGSI VF+++
Sbjct: 185 LLALVSACSAIGAFRLIKEIHS-YAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
+R++V+W+S+I+ YA +G A+ A+ F +M PDDI F+N+L ACSH GL E
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRM 449
YF M+ +YG++ ++HYSC++D+L R G +EAY++I +MP +P WGALL ACR
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 450 HGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHS 509
+G +ELA ++A LL ++PE+ YVLL I + + + +R+R M++ GVK PG S
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 157/373 (42%), Gaps = 66/373 (17%)
Query: 6 IRGYRKARNPNIAFSYFLRM-LRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLG 64
+ Y N A + FL+M + +D F ALK+C G SVH K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 65 FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMEL-- 122
F S V L+ Y + HAR++FDE ++ V W M Y + A+EL
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 123 ----------FNLMLRGDV---------------------EPNEVTLIAVLSACSQMGDI 151
FN +++G V +PN +TL+A++SACS +G
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 152 EMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGY 211
+ + +H + + L + L++ Y +CGS+V + +FD ME RDV +W+S+++ Y
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 212 AKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
A GD E+A LK F EM A V P++ A +
Sbjct: 259 ALHGDAESA-------------------------------LKTFQEMELAKVTPDDIAFL 287
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE 331
+VL AC + + + G+ S + ++D+ ++ G E A +V A+ E
Sbjct: 288 NVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPE 347
Query: 332 RNLV-SWNSMIAG 343
+ +W +++
Sbjct: 348 KPTAKTWGALLGA 360
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 122/269 (45%), Gaps = 8/269 (2%)
Query: 2 WNTMIRGYRKARNPNI-AFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+N +I+G + + A ++ +M+ R + + + + + AC + + +H
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ + +++GL+ Y G + + + VFD +DVV W+++ YA +E A+
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESAL 268
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDM 179
+ F M V P+++ + VL ACS G + + M+ +R S + ++ L+D+
Sbjct: 269 KTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDV 328
Query: 180 YVKCGSLVAARELFDRM-ETRDVFSWTSMVNGYAKCGDLE----NARRFLDQTPHKNVVS 234
+ G A ++ M E +W +++ G++E AR L P +N +
Sbjct: 329 LSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEP-ENPAN 387
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
+ + Y + +E+ +L +M +GV
Sbjct: 388 YVLLGKIYMSVGRQEEAERLRLKMKESGV 416
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 225/411 (54%), Gaps = 4/411 (0%)
Query: 106 MFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKN 165
+F Y + + A+ + +LR P+ T ++++S + ++ G+ H K
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 166 MRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLD 225
L + N+L+ MY CG+L A++LF + RD+ SW S++ G + GD+ A + D
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 226 QTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL 285
+ P KN++SW+ M++ Y N P S+ LF EM+ AG E LV +L+ACG+ + L
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYA 345
G +H +I ++ SV + A++DMY KC + A +F+++S RN V+WN MI +
Sbjct: 269 GRSVHAS-LIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
+G+ + + +F+ M +PD++TFV +L C+ GL+S+GQ Y+ M + IKP
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMP---MQPCEAAWGALLNACRMHGNVELARLSACN 462
H CM +L G +EA E + ++P + P W LL++ R GN L A +
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKS 447
Query: 463 LLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
L+ DP + Y LL NI + +W DV RVR +++++ + +IPG LV++
Sbjct: 448 LIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 150/364 (41%), Gaps = 62/364 (17%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N + + Y + +P A ++ +LR D +FV + E+ G+ H K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAR-------------------------------EV 91
G D L V+N L+H Y G L A+ ++
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 92 FDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDI 151
FDE K++++W M Y N +++ LF M+R + NE TL+ +L+AC + +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 152 EMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGY 211
+ GR VH ++ + + S+ + AL+DMY KC + AR +FD + R
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR------------ 314
Query: 212 AKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
N V+W+ M+ + + +P+ L+LF M+ + P+E V
Sbjct: 315 -------------------NKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE 331
VL C + ++ G + V E + P+ + ++Y+ G E A E + +
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 332 RNLV 335
++
Sbjct: 416 EDVT 419
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI Y A NP ++ S F M+R + + + V L AC + EG SVH +
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ +S +++ LI Y + AR +FD S+++ VTW M + E +E
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLNLHNALLDMY 180
LF M+ G + P+EVT + VL C++ G + G+ + M ++ ++ + + ++Y
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 181 VKCGSLVAARELFDRMETRDV 201
G A E + DV
Sbjct: 398 SSAGFPEEAEEALKNLPDEDV 418
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 153/506 (30%), Positives = 262/506 (51%), Gaps = 44/506 (8%)
Query: 54 ESVHCVVRKLGF------DSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMF 107
+S+ CV R GF + E + N ++ + G + AR +FDE +++ ++ ++
Sbjct: 137 KSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSII 196
Query: 108 DGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
G+ + A ELF +M + T +L A + +G I +G+++H
Sbjct: 197 SGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLH--------V 248
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQT 227
C+L L + + +V CG +++ Y+KCGD+E+AR +
Sbjct: 249 CALKL-GVVDNTFVSCG----------------------LIDMYSKCGDIEDARCAFECM 285
Query: 228 PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
P K V+W+ ++AGY+ + +E+L L ++M +GV ++ L ++ +L+ L L
Sbjct: 286 PEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTK 345
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAAN 347
H +I G + A++D Y+K G ++ A VF+ + +N++SWN+++ GYA +
Sbjct: 346 QAHAS-LIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREH 407
G+ AV +F++M P+ +TF+ +L+AC++ GL +G E F +M +GIKP+ H
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464
Query: 408 YSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLD 467
Y+CMI+LLGR GLL EA I P++ W ALLNACRM N+EL R+ A L +
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMG 524
Query: 468 PEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESH 527
PE G YV++ N+ + K + V + KG+ +P + VEV + FL D
Sbjct: 525 PEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFD 584
Query: 528 PQSE----EIYKVLDEIFLSSELEDY 549
+E +IY+ +DE L E+ +Y
Sbjct: 585 SYNETVKRQIYQKVDE--LMEEISEY 608
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 163/364 (44%), Gaps = 36/364 (9%)
Query: 90 EVFDESSL-KDVVTWTTMFDGYASRNCSELAMELFNLM-LRGDVEPNEVTLIAVLSACSQ 147
++ D++ + K VT + + N A ELF ++ +R + T A++ AC +
Sbjct: 76 QILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIR 135
Query: 148 MGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM 207
+ I +RV+ M + N +L M+VKCG ++ AR LFD + R+++S+ S+
Sbjct: 136 LKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSI 195
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
++G+ G+ E+ +LF M E
Sbjct: 196 ISGFVNFGNY-------------------------------VEAFELFKMMWEELSDCET 224
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
H +L A L + +G +H ++ G+ + ++ ++DMY+KCG IE A F
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHV-CALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFE 283
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
+ E+ V+WN++IAGYA +G +++A+ + MR G D T ++ + +
Sbjct: 284 CMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLEL 343
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
++ ++ RN G + + + ++D + G + A + +P + +W AL+
Sbjct: 344 TKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNI-ISWNALMGGY 401
Query: 448 RMHG 451
HG
Sbjct: 402 ANHG 405
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 144/341 (42%), Gaps = 32/341 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+ ++I G+ N AF F M + + +F L+A L + G+ +H
Sbjct: 192 YYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCAL 251
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
KLG V GLI Y+ G ++ AR F+ K V W + GYA SE A+
Sbjct: 252 KLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALC 311
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
L M V ++ TL ++ +++ +E+ ++ H ++ + + + AL+D Y
Sbjct: 312 LLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS 371
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K G + AR +FD++ +++ SW +++ GYA G
Sbjct: 372 KWGRVDTARYVFDKLPRKNIISWNALMGGYANHG-------------------------- 405
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
+ +++KLF +M+ A V P ++VLSAC G I G+ P
Sbjct: 406 -----RGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 302 SVTLANAILDMYAKCGSI-EAAAEVFNAISERNLVSWNSMI 341
++++ + G + EA A + A + + W +++
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALL 501
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 258/520 (49%), Gaps = 53/520 (10%)
Query: 2 WNTMIRGYRKA-----RNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESV 56
WN +I G + ++ F Y R+L V +D SF+ ++ C + + G +
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL 164
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
HC++ K G +S L+HFY G + AR VF+ +D+V W + Y
Sbjct: 165 HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMI 224
Query: 117 ELAMELFNLM------LRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSL 170
+ A L LM RGD T ++LSAC IE G+++H + K + + +
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDY----FTFSSLLSACR----IEQGKQIHAILFKVSYQFDI 276
Query: 171 NLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK 230
+ ALL+MY AK L +AR + +
Sbjct: 277 PVATALLNMY-------------------------------AKSNHLSDARECFESMVVR 305
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
NVVSW+AM+ G++QN + +E+++LF +M+ + P+E SVLS+C + S + +
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV- 364
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQA 350
Q V +KG +++AN+++ Y++ G++ A F++I E +LVSW S+I A++G A
Sbjct: 365 QAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFA 424
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSC 410
++++ +F+ M +PD ITF+ +L+ACSHGGL+ EG F M Y I+ + EHY+C
Sbjct: 425 EESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC 483
Query: 411 MIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPED 470
+IDLLGR G + EA +++ SMP +P A A C +H E + A LL ++P
Sbjct: 484 LIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTK 543
Query: 471 SGIYVLLANICANERKWGDVKRVRSLMRDKGVK-KIPGHS 509
Y +L+N +E W +R R K PG S
Sbjct: 544 PVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 186/406 (45%), Gaps = 47/406 (11%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC- 115
H + K G + L ++N L+ Y A ++FDE L+++VTW + G R+
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 116 ----SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLN 171
+ L + +L DV + V+ + ++ C+ +++ G ++H M K+ + S
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS-- 176
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
F TS+V+ Y KCG + ARR + ++
Sbjct: 177 -----------------------------CFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAG---VVPEEHALVSVLSACGQLSCLNLGHW 288
+V W+A+++ Y N E+ L ++MG+ + S+LSAC + G
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLL-KLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQ 262
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANG 348
IH + + + +A A+L+MYAK + A E F ++ RN+VSWN+MI G+A NG
Sbjct: 263 IHA-ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 349 QAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY 408
+ ++A+ +F QM +PD++TF ++L++C+ I E ++ M G
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ-VQAMVTKKGSADFLSVA 380
Query: 409 SCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVE 454
+ +I R G L EA S+ +P +W +++ A HG E
Sbjct: 381 NSLISSYSRNGNLSEALLCFHSI-REPDLVSWTSVIGALASHGFAE 425
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 40/332 (12%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRML---RHRVEMDCRSFVFALKACEELSGDFEGESVH 57
+WN ++ Y + AF L+++ ++R D +F L AC +G+ +H
Sbjct: 210 LWNALVSSYVLNGMIDEAFG-LLKLMGSDKNRFRGDYFTFSSLLSACRIE----QGKQIH 264
Query: 58 CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSE 117
++ K+ + ++ V L++ YA L ARE F+ +++VV+W M G+A
Sbjct: 265 AILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGR 324
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
AM LF ML +++P+E+T +VLS+C++ I ++V + KK L++ N+L+
Sbjct: 325 EAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLI 384
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
Y + G+L A F + D+ SWTS++ A G E
Sbjct: 385 SSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAE------------------- 425
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
ESL++F M+ + P++ + VLSAC + G +
Sbjct: 426 ------------ESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFY 472
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+ ++D+ + G I+ A++V N++
Sbjct: 473 KIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 208/337 (61%), Gaps = 7/337 (2%)
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
T++++ Y+K GDL +A + D+ P ++V SW+A++AG N+ E+++L+ M G+
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAE 324
E +V+ L AC L + G I + + +V ++NA +DMY+KCG ++ A +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGY-----SNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 325 VFNAIS-ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGG 383
VF + ++++V+WN+MI G+A +G+A +A+ +FD++ G KPDD++++ LTAC H G
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
L+ G F M G++ +HY C++DLL R G L+EA+++I SM M P W +L
Sbjct: 323 LVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Query: 444 LNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVK 503
L A ++ +VE+A +++ + + + G +VLL+N+ A + +W DV RVR M K VK
Sbjct: 382 LGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVK 441
Query: 504 KIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
KIPG S +E G EF +D+SH Q EIY+ +DEI
Sbjct: 442 KIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 173/377 (45%), Gaps = 30/377 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRV------EMDCRSFVFALKACEELSGDFEGES 55
WN +IRG+ + +P++AFS++ ML+ +D + F LKAC +
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
+HC + + G ++ L+ L+ Y+ G L A ++FDE ++DV +W + G S N
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
+ AMEL+ M + +EVT++A L ACS +GD++ G + N+ S NA
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS----NA 246
Query: 176 LLDMYVKCGSLVAARELFDRME-TRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV-- 232
+DMY KCG + A ++F++ + V +W +M+ G+A G+ A D+ +
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 233 --VSWSAMLAGYSQNNKPKESLKLFHEMMGAGV---VPEEHALVSVLSACGQLSCLNLGH 287
VS+ A L + L +F+ M GV + +V +LS G+L
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLR------ 360
Query: 288 WIHQHFVI-EKGMHPSVTLANAIL---DMYAKCGSIEAAAEVFNAISERNLVSWNSMIAG 343
H +I M P L ++L ++Y+ E A+ + N + +
Sbjct: 361 --EAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNV 418
Query: 344 YAANGQAKQAVNVFDQM 360
YAA G+ K V D M
Sbjct: 419 YAAQGRWKDVGRVRDDM 435
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 112/248 (45%), Gaps = 12/248 (4%)
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVL 274
GDL A + P W+A++ G++ ++ P + + M+ V L
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 275 S------ACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
+ AC + C + +H + +G+ L +LD Y+K G + +A ++F+
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQ-INRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 329 ISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG 388
+ R++ SWN++IAG + +A +A+ ++ +M G + ++T V L ACSH G + EG
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 389 QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACR 448
+ F+ + I + ID+ + G + +AY++ + W ++
Sbjct: 230 ENIFHGYSNDNVIVS-----NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 449 MHGNVELA 456
+HG A
Sbjct: 285 VHGEAHRA 292
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 260/522 (49%), Gaps = 39/522 (7%)
Query: 35 RSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADR--GWLKHAREVF 92
R V L+ C + + +H V G + N L+ F A G L HA+ +F
Sbjct: 6 RVIVRMLQGCNSMK---KLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLF 62
Query: 93 DE-SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVE-PNEVTLIAVLSACSQMGD 150
D S W + G+++ + ++ +N ML V P+ T L +C ++
Sbjct: 63 DHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNG 210
I +H ++ + + LD D TS+V
Sbjct: 123 IPKCLEIHGSV----------IRSGFLD---------------------DAIVATSLVRC 151
Query: 211 YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
Y+ G +E A + D+ P +++VSW+ M+ +S ++L ++ M GV + + L
Sbjct: 152 YSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTL 211
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
V++LS+C +S LN+G +H+ + V ++NA++DMYAKCGS+E A VFN +
Sbjct: 212 VALLSSCAHVSALNMGVMLHR-IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR 270
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
+R++++WNSMI GY +G +A++ F +M G +P+ ITF+ LL CSH GL+ EG E
Sbjct: 271 KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE 330
Query: 391 YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMH 450
+F M + + P +HY CM+DL GR G L+ + E+I + W LL +C++H
Sbjct: 331 HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
Query: 451 GNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSL 510
N+EL ++ L+ L+ ++G YVL+ +I + +R L+R ++ +PG S
Sbjct: 391 RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSW 450
Query: 511 VEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELEDYDTD 552
+E+ + +F+V D+ HP+S IY L E+ + L Y +
Sbjct: 451 IEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPE 492
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 39/346 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEM-DCRSFVFALKACEELSGDFEGESVHCVV 60
WN +IRG+ + +P + ++ RML V D +F FALK+CE + + +H V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ GF + +V L+ Y+ G ++ A +VFDE ++D+V+W M ++ A+
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
++ M V + TL+A+LS+C+ + + MG +H + + NAL+DMY
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCGSL A +F+ M RDV +W SM+ GY G
Sbjct: 254 AKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG------------------------- 288
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG-- 298
E++ F +M+ +GV P + +L C + G +HF I
Sbjct: 289 ------HGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEG---VEHFEIMSSQF 339
Query: 299 -MHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMIA 342
+ P+V ++D+Y + G +E + E+ A S + V W +++
Sbjct: 340 HLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 155/368 (42%), Gaps = 41/368 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN MI + N A S + RM V D + V L +C +S G +H +
Sbjct: 176 WNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIAC 235
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
+ +S + V N LI YA G L++A VF+ +DV+TW +M GY A+
Sbjct: 236 DIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAIS 295
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCSLNLHNALLDMY 180
F M+ V PN +T + +L CS G ++ G E M + ++ ++ + ++D+Y
Sbjct: 296 FFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLY 355
Query: 181 VKCGSLVAARE-LFDRMETRDVFSWTSMVNGYAKCGDL---ENARRFLDQTPHKNVVSWS 236
+ G L + E ++ D W +++ +L E A + L Q N +
Sbjct: 356 GRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYV 415
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
M + YS N + F M + H L +V S + +G +H+ FV++
Sbjct: 416 LMTSIYSAANDAQA----FASMRK---LIRSHDLQTVPG----WSWIEIGDQVHK-FVVD 463
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
MHP + +Y++ G EV N +++AGY + A +
Sbjct: 464 DKMHPESAV------IYSELG------EVIN----------RAILAGYKPEDSNRTAPTL 501
Query: 357 FDQMRCMG 364
D RC+G
Sbjct: 502 SD--RCLG 507
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 240/458 (52%), Gaps = 38/458 (8%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L AR + SS TW + GY+S + ++ +++ M R ++PN++T +L A
Sbjct: 63 LAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKA 122
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSW 204
C+ + GR++ + K H D+YV
Sbjct: 123 CASFLGLTAGRQIQVEVLK---------HGFDFDVYVG---------------------- 151
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV 264
++++ Y C +AR+ D+ +NVVSW++++ +N K + F EM+G
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 265 PEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAE 324
P+E +V +LSACG L+LG +H ++ + + + L A++DMYAK G +E A
Sbjct: 212 PDETTMVVLLSACG--GNLSLGKLVHSQVMVRE-LELNCRLGTALVDMYAKSGGLEYARL 268
Query: 325 VFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM-RCMGFKPDDITFVNLLTACSHGG 383
VF + ++N+ +W++MI G A G A++A+ +F +M + +P+ +TF+ +L ACSH G
Sbjct: 269 VFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTG 328
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
L+ +G +YF+ ME+ + IKP HY M+D+LGR G L EAY+ I MP +P W L
Sbjct: 329 LVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTL 388
Query: 444 LNACRMHGNVE---LARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDK 500
L+AC +H + + + L+ L+P+ SG V++AN A R W + VR +M++
Sbjct: 389 LSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKET 448
Query: 501 GVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLD 538
+KKI G S +E+ G F F + + IY++LD
Sbjct: 449 KMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 170/381 (44%), Gaps = 70/381 (18%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN + RGY + +P + + M R ++ + +F F LKAC G G + V
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K GFD ++ V N LIH Y AR+VFDE + ++VV+W ++ L E
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
F M+ P+E T++ +LSAC G++ +G+ VH + + + + L AL+DMY
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYA 258
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
K G L AR +F+RM ++V++W++M+ G A+ G E
Sbjct: 259 KSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAE----------------------- 295
Query: 242 YSQNNKPKESLKLFHEMMG-AGVVPEEHALVSVLSACGQLSCLNLGH-WIHQHFVIEKGM 299
E+L+LF +MM + V P + VL AC ++ G+ + H+ I K +
Sbjct: 296 --------EALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHK-I 346
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
P + A++D+ + G + A +D
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEA----------------------------------YDF 372
Query: 360 MRCMGFKPDDITFVNLLTACS 380
++ M F+PD + + LL+ACS
Sbjct: 373 IKKMPFEPDAVVWRTLLSACS 393
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 118/250 (47%), Gaps = 7/250 (2%)
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
V+ + DL AR L + +W+ + GYS ++ P ES+ ++ EM G+ P +
Sbjct: 54 VSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNK 113
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
+L AC L G I Q V++ G V + N ++ +Y C A +VF+
Sbjct: 114 LTFPFLLKACASFLGLTAGRQI-QVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFD 172
Query: 328 AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
++ERN+VSWNS++ NG+ F +M F PD+ T V LL+AC GG +S
Sbjct: 173 EMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSL 230
Query: 388 GQ-EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
G+ + M R + + + ++D+ ++G L+ A L+ + W A++
Sbjct: 231 GKLVHSQVMVRELELNCRLG--TALVDMYAKSGGLEYA-RLVFERMVDKNVWTWSAMIVG 287
Query: 447 CRMHGNVELA 456
+G E A
Sbjct: 288 LAQYGFAEEA 297
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 277/547 (50%), Gaps = 44/547 (8%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEEL-SGDFEGESVHCV 59
+W +++ G+ + A FL M ++ + ++ L C + S DF G+ +H
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF-GKQIHSQ 350
Query: 60 VRKLGFDSELLVRNGLIHFYAD-RGWLKHAREVFDESSLKDVVTWTTMFDGYAS----RN 114
K+GF+ V N L+ Y A VF +VV+WTT+ G ++
Sbjct: 351 TIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
C L ME M++ +VEPN VTL VL ACS++ + +H + ++++ + + N
Sbjct: 411 CFGLLME----MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGN 466
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
+L+D Y + A + M+ RD ++TS+V + + G E A
Sbjct: 467 SLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMA-------------- 512
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
L + + M G G+ ++ +L +SA L L G +H +
Sbjct: 513 -----------------LSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC-YS 554
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
++ G + ++ N+++DMY+KCGS+E A +VF I+ ++VSWN +++G A+NG A+
Sbjct: 555 VKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSAL 614
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
+ F++MR +PD +TF+ LL+ACS+G L G EYF M++ Y I+P+ EHY ++ +
Sbjct: 615 SAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGI 674
Query: 415 LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIY 474
LGR G L+EA ++ +M ++P + LL ACR GN+ L A L+L P D +Y
Sbjct: 675 LGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALY 734
Query: 475 VLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESH-PQSEEI 533
+LLA++ K ++ R+LM +K + K G S VEV G+ F+ D + ++ I
Sbjct: 735 ILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGI 794
Query: 534 YKVLDEI 540
Y ++ I
Sbjct: 795 YAEIESI 801
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 202/421 (47%), Gaps = 37/421 (8%)
Query: 35 RSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE 94
+S + L CE S G +HC V K G L + N L+ Y + +AR++FDE
Sbjct: 25 KSCIRILSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDE 83
Query: 95 SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
S + V WT M + A+ LF M+ PNE T +V+ +C+ + DI G
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
RVH ++ K + + ++L D+Y KCG A ELF ++ D SWT M++
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS----- 198
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVL 274
L AR+ W +E+L+ + EM+ AGV P E V +L
Sbjct: 199 -SLVGARK------------W-------------REALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 275 SACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL 334
A L L G IH + ++ +G+ +V L +++D Y++ +E A V N+ E+++
Sbjct: 233 GASSFLG-LEFGKTIHSNIIV-RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 335 VSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYT 394
W S+++G+ N +AK+AV F +MR +G +P++ T+ +L+ CS + G++ ++
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQ-IHS 349
Query: 395 MERNYGIKPKREHYSCMIDLLGRTGLLK-EAYELITSMPMQPCEAAWGALLNACRMHGNV 453
G + + + ++D+ + + EA + +M + P +W L+ HG V
Sbjct: 350 QTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFV 408
Query: 454 E 454
+
Sbjct: 409 Q 409
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 172/380 (45%), Gaps = 34/380 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI + K++ A S F M+ + +F +++C L G VH V
Sbjct: 92 WTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVI 151
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K GF+ +V + L Y+ G K A E+F D ++WT M A++
Sbjct: 152 KTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQ 211
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
++ M++ V PNE T + +L A S +G +E G+ +H N+ + + ++ L +L+D Y
Sbjct: 212 FYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYS 270
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
+ + A + + +DVF WTS+V+G+ +
Sbjct: 271 QFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVR---------------------------- 302
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
N + KE++ F EM G+ P ++LS C + L+ G IH I+ G
Sbjct: 303 ---NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ-TIKVGFED 358
Query: 302 SVTLANAILDMYAKCGSIEA-AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
S + NA++DMY KC + E A+ VF A+ N+VSW ++I G +G + + +M
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 361 RCMGFKPDDITFVNLLTACS 380
+P+ +T +L ACS
Sbjct: 419 VKREVEPNVVTLSGVLRACS 438
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 259/526 (49%), Gaps = 13/526 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +I Y + + + S + RM+ + D ++ +KAC L G VH +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
L V N LI Y G + AR +FD S +D V+W + + Y S A +
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
L + M VE + VT + C + G+ M N+R A+++
Sbjct: 272 LLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG---SVAMINGLK 328
Query: 182 KCGSLVAAR--ELFDRMETRDV-FSW------TSMVNGYAKCGDLENARRFLDQTPHKNV 232
C + A + ++F + R FS S++ Y++C DL +A Q ++
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
+W+++++G++ N + +E+ L EM+ +G P L S+L ++ L G H +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
+ + + L N+++DMYAK G I AA VF+++ +R+ V++ S+I GY G+ +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 353 AVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
A+ F M G KPD +T V +L+ACSH L+ EG F ME +GI+ + EHYSCM+
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMV 568
Query: 413 DLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACN-LLSLDPEDS 471
DL R G L +A ++ ++P +P A LL AC +HGN + +A LL PE
Sbjct: 569 DLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL 628
Query: 472 GIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEF 517
G Y+LLA++ A W + V++L+ D GV+K +L+E D E
Sbjct: 629 GHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 183/380 (48%), Gaps = 7/380 (1%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
HC+ L FDS L+ + L+ FY+ L A+ + + S + + W + Y
Sbjct: 108 HCISSGLEFDSVLVPK--LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 165
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
+ ++ ++ M+ + +E T +V+ AC+ + D GR VH ++E + RC+L + NAL
Sbjct: 166 QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL 225
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQT----PHKNV 232
+ MY + G + AR LFDRM RD SW +++N Y L A + LD+ ++
Sbjct: 226 ISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 285
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
V+W+ + G + +L M V A+++ L AC + L G H
Sbjct: 286 VTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCL 345
Query: 293 FVIEKGM-HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
+ H + N+++ MY++C + A VF + +L +WNS+I+G+A N +++
Sbjct: 346 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 405
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
+ + +M GF P+ IT ++L + G + G+E+ + R K ++ +
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 412 IDLLGRTGLLKEAYELITSM 431
+D+ ++G + A + SM
Sbjct: 466 VDMYAKSGEIIAAKRVFDSM 485
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 259/526 (49%), Gaps = 13/526 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +I Y + + + S + RM+ + D ++ +KAC L G VH +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
L V N LI Y G + AR +FD S +D V+W + + Y S A +
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
L + M VE + VT + C + G+ M N+R A+++
Sbjct: 272 LLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG---SVAMINGLK 328
Query: 182 KCGSLVAAR--ELFDRMETRDV-FSW------TSMVNGYAKCGDLENARRFLDQTPHKNV 232
C + A + ++F + R FS S++ Y++C DL +A Q ++
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
+W+++++G++ N + +E+ L EM+ +G P L S+L ++ L G H +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
+ + + L N+++DMYAK G I AA VF+++ +R+ V++ S+I GY G+ +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 353 AVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
A+ F M G KPD +T V +L+ACSH L+ EG F ME +GI+ + EHYSCM+
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMV 568
Query: 413 DLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACN-LLSLDPEDS 471
DL R G L +A ++ ++P +P A LL AC +HGN + +A LL PE
Sbjct: 569 DLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL 628
Query: 472 GIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEF 517
G Y+LLA++ A W + V++L+ D GV+K +L+E D E
Sbjct: 629 GHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 183/380 (48%), Gaps = 7/380 (1%)
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
HC+ L FDS L+ + L+ FY+ L A+ + + S + + W + Y
Sbjct: 108 HCISSGLEFDSVLVPK--LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRF 165
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
+ ++ ++ M+ + +E T +V+ AC+ + D GR VH ++E + RC+L + NAL
Sbjct: 166 QESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNAL 225
Query: 177 LDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQT----PHKNV 232
+ MY + G + AR LFDRM RD SW +++N Y L A + LD+ ++
Sbjct: 226 ISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 285
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
V+W+ + G + +L M V A+++ L AC + L G H
Sbjct: 286 VTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCL 345
Query: 293 FVIEKGM-HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
+ H + N+++ MY++C + A VF + +L +WNS+I+G+A N +++
Sbjct: 346 VIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSE 405
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
+ + +M GF P+ IT ++L + G + G+E+ + R K ++ +
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 412 IDLLGRTGLLKEAYELITSM 431
+D+ ++G + A + SM
Sbjct: 466 VDMYAKSGEIIAAKRVFDSM 485
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 206/345 (59%), Gaps = 6/345 (1%)
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
+ AL+ MY+ G+++ A ++FD M R+ +W M+ G GD E A FL++ P++
Sbjct: 160 VQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRT 219
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVV-PEEHALVSVLSACGQLSCLNLGHWIH 290
VVSW+ ++ GY++ +KPKE++ LF M+ + P E ++++L A L L + +H
Sbjct: 220 VVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVH 279
Query: 291 QHFVIEKGMHP-SVTLANAILDMYAKCGSIEAAAEVFNAIS--ERNLVSWNSMIAGYAAN 347
+V ++G P + + N+++D YAKCG I++A + F I +NLVSW +MI+ +A +
Sbjct: 280 A-YVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIH 338
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG-QEYFYTMERNYGIKPKRE 406
G K+AV++F M +G KP+ +T +++L ACSHGGL E E+F TM Y I P +
Sbjct: 339 GMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVK 398
Query: 407 HYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSL 466
HY C++D+L R G L+EA ++ +P++ W LL AC ++ + ELA L+ L
Sbjct: 399 HYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMEL 458
Query: 467 DPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLV 511
+ G YVL++NI ++ D +R R M +GV K+PGHS V
Sbjct: 459 ERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 181/403 (44%), Gaps = 77/403 (19%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRV---------EMDCRSFVFALKACE--ELSG 49
++N ++R Y P A+ + ++ R D +++F LKA
Sbjct: 79 LFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPS 138
Query: 50 DFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE--------------- 94
G +H + KLGF+S + V+ L+ Y G + A +VFDE
Sbjct: 139 LLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITG 198
Query: 95 -SSLKD---------------VVTWTTMFDGYASRNCSELAMELFNLMLRGD-VEPNEVT 137
++L D VV+WTT+ DGYA + + A+ LF+ M+ D ++PNE+T
Sbjct: 199 LTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEIT 258
Query: 138 LIAVLSACSQMGDIEMGRRVHENMEKKN-MRCSLNLHNALLDMYVKCGSLVAARELFDRM 196
++A+L A +GD++M VH + K+ + C + + N+L+D Y KCG + +A + F
Sbjct: 259 ILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI-- 316
Query: 197 ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFH 256
++ N R+ N+VSW+ M++ ++ + KE++ +F
Sbjct: 317 -------------------EIPNGRK--------NLVSWTTMISAFAIHGMGKEAVSMFK 349
Query: 257 EMMGAGVVPEEHALVSVLSAC--GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYA 314
+M G+ P ++SVL+AC G L+ + + V E + P V ++DM
Sbjct: 350 DMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNT-MVNEYKITPDVKHYGCLVDMLR 408
Query: 315 KCGSIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQAKQAVNV 356
+ G +E A ++ I E V W ++ + A+ A V
Sbjct: 409 RKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERV 451
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 255/493 (51%), Gaps = 37/493 (7%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
+H V K GF S + N L+ FY L+ A +VFDE DV++W ++ GY
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNM-RCSLNLHN 174
+ + LF + R DV PNE + A L+AC+++ +G +H + K + + ++ + N
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV-------------------------- 208
L+DMY KCG + A +F ME +D SW ++V
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVT 256
Query: 209 -----NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
+ + K GD NA + L P+ N SW+ +L GY + K E+ + F +M +GV
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGV 316
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
+E++L VL+A L+ + G IH + G+ V +A+A++DMY+KCG ++ A
Sbjct: 317 RFDEYSLSIVLAAVAALAVVPWGSLIHA-CAHKLGLDSRVVVASALIDMYSKCGMLKHAE 375
Query: 324 EVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGF-KPDDITFVNLLTACSHG 382
+F + +NL+ WN MI+GYA NG + +A+ +F+Q++ F KPD TF+NLL CSH
Sbjct: 376 LMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHC 435
Query: 383 GLISEGQ-EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWG 441
+ E YF M Y IKP EH +I +G+ G + +A ++I AW
Sbjct: 436 EVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWR 495
Query: 442 ALLNACRMHGNVELARLSACNLLSLDPEDSG--IYVLLANICANERKWGDVKRVRSLMRD 499
ALL AC +++ A+ A ++ L D +Y++++N+ A +W +V ++R +MR+
Sbjct: 496 ALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRE 555
Query: 500 KGVKKIPGHSLVE 512
GV K G S ++
Sbjct: 556 SGVLKEVGSSWID 568
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 85/351 (24%)
Query: 102 TWTTMFDG---YASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
+W+T+ + S A+EL N + D P L+ +L G + + R++H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASP----LVHLLRVSGNYGYVSLCRQLH 78
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLE 218
+ K + L N+L+ Y SL A ++FD M DV SW S+V+GY + G
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG--- 135
Query: 219 NARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACG 278
RF +E + LF E+ + V P E + + L+AC
Sbjct: 136 ---RF-------------------------QEGICLFLELHRSDVFPNEFSFTAALAACA 167
Query: 279 QLSCLNLGHWIHQHFV---IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLV 335
+L LG IH V +EKG +V + N ++DMY KCG ++ A VF + E++ V
Sbjct: 168 RLHLSPLGACIHSKLVKLGLEKG---NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM 395
SWN+++A + NG+ + + F QM PD +T
Sbjct: 225 SWNAIVASCSRNGKLELGLWFFHQMP----NPDTVT------------------------ 256
Query: 396 ERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
Y+ +ID ++G A+++++ MP P ++W +L
Sbjct: 257 ------------YNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTG 294
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 167/408 (40%), Gaps = 55/408 (13%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN+++ GY ++ FL + R V + SF AL AC L G +H +
Sbjct: 124 WNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV 183
Query: 62 KLGFD-SELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
KLG + ++V N LI Y G++ A VF KD V+W + + EL +
Sbjct: 184 KLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGL 243
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
F+ M P+ VT ++ A + GD +V +M N N +L Y
Sbjct: 244 WFFHQM----PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSS----WNTILTGY 295
Query: 181 VKCGSLVAARELFDRMETRDV-------------------FSWTSMVNG----------- 210
V A E F +M + V W S+++
Sbjct: 296 VNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRV 355
Query: 211 ---------YAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
Y+KCG L++A P KN++ W+ M++GY++N E++KLF+++
Sbjct: 356 VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
Query: 262 GVV-PEEHALVSVLSACGQLSC---LNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCG 317
+ P+ +++L+ C + LG++ + + E + PSV +++ + G
Sbjct: 416 RFLKPDRFTFLNLLAVCSHCEVPMEVMLGYF--EMMINEYRIKPSVEHCCSLIRAMGQRG 473
Query: 318 SIEAAAEVFNAIS-ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG 364
+ A +V + V+W +++ +A K A V +M +G
Sbjct: 474 EVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELG 521
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 172/580 (29%), Positives = 290/580 (50%), Gaps = 74/580 (12%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN MI G +++ + F M + V D F L C+ S DF G+ VH +V
Sbjct: 157 IWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDF-GKQVHSLV 215
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDES--SLKDVVTWTTMFDGYASRNCSEL 118
K GF V N LI Y + + A VF+E+ +++D VT+ + DG A E
Sbjct: 216 IKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDE- 274
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACS--QMG--------------------------- 149
++ +F ML + P ++T ++V+ +CS MG
Sbjct: 275 SLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYS 334
Query: 150 ---DIEMGRRVHENMEKKNM----------------RCSLNLHNALLDMYVK-----CGS 185
D +V E++E+K++ + +++++ + + VK GS
Sbjct: 335 SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGS 394
Query: 186 LVAARELFDRMETRDV----FSWTS-------MVNGYAKCGDLENARRFLDQTPHKNVVS 234
L+A D +E F +S +++ Y+K G +E A +++ KN++S
Sbjct: 395 LLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLIS 454
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGV--VPEEHALVSVLSACGQLSCLNLGHWIHQH 292
W+A+++G+ N P E L+ F ++ + V +P+ + L ++LS C S L LG H
Sbjct: 455 WNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA- 513
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
+V+ G + NA+++MY++CG+I+ + EVFN +SE+++VSWNS+I+ Y+ +G+ +
Sbjct: 514 YVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 353 AVNVFDQMRCMG-FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
AVN + M+ G PD TF +L+ACSH GL+ EG E F +M +G+ +H+SC+
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 412 IDLLGRTGLLKEAYEL--ITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPE 469
+DLLGR G L EA L I+ + W AL +AC HG+++L ++ A L+ + +
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKD 693
Query: 470 DSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHS 509
D +YV L+NI A W + + R + G K G S
Sbjct: 694 DPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 195/453 (43%), Gaps = 76/453 (16%)
Query: 33 DCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVF 92
D S A+ L G VHC + G V N L+ Y G L ++ F
Sbjct: 56 DQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKF 115
Query: 93 DESSLKDVVTWTTM----------------FDGYASRN-----------CSE-----LAM 120
DE DV +WTT+ FD R+ C E ++
Sbjct: 116 DEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSV 175
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
ELF M + V ++ +LS C G ++ G++VH + K + ++ NAL+ MY
Sbjct: 176 ELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMY 234
Query: 181 VKCGSLVAARELFDRMET--RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
C +V A +F+ + RD ++ +++G
Sbjct: 235 FNCQVVVDACLVFEETDVAVRDQVTFNVVIDG---------------------------- 266
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
LAG+ K ESL +F +M+ A + P + VSV+ +C SC +GH +H I+ G
Sbjct: 267 LAGF----KRDESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHG-LAIKTG 318
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
++NA + MY+ AA +VF ++ E++LV+WN+MI+ Y K A++V+
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M +G KPD+ TF +LL ++ Q +G+ K E + +I +
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACII----KFGLSSKIEISNALISAYSKN 434
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
G +++A +L+ ++ +W A+++ +G
Sbjct: 435 GQIEKA-DLLFERSLRKNLISWNAIISGFYHNG 466
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 156/292 (53%), Gaps = 16/292 (5%)
Query: 119 AMELFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A++LF + R + P++ ++ ++ + D G +VH + + C ++ N LL
Sbjct: 40 ALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLL 99
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS-WS 236
+Y + G+L + ++ FD ++ DV+SWT++++ K GD+E A D+ P ++ V+ W+
Sbjct: 100 SLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWN 159
Query: 237 AMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE 296
AM+ G ++ + S++LF EM GV ++ ++LS C S L+ G +H VI+
Sbjct: 160 AMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS-LDFGKQVHS-LVIK 217
Query: 297 KGMHPSVTLANAILDMYAKCGSIEAAAEVF--NAISERNLVSWNSMIAGYAANGQAKQAV 354
G + ++ NA++ MY C + A VF ++ R+ V++N +I G A + +++
Sbjct: 218 AGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF-KRDESL 276
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACS--------HGGLISEGQEYFYTMERN 398
VF +M +P D+TFV+++ +CS HG I G E YT+ N
Sbjct: 277 LVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEK-YTLVSN 327
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 238/454 (52%), Gaps = 35/454 (7%)
Query: 69 LLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR 128
+L+ L+ Y A VFD+ +K+ V+WT M G + E+ ++LF M R
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR 244
Query: 129 GDVEPNEVTLIAVLSACSQMG-DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLV 187
++ PN VTL++VL AC ++ + + +H + L A + MY
Sbjct: 245 ENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMY------- 297
Query: 188 AARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNK 247
+CG++ +R + + ++VV WS+M++GY++
Sbjct: 298 ------------------------CRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGD 333
Query: 248 PKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLAN 307
E + L ++M G+ L++++SAC + L+ +H +++ G + L N
Sbjct: 334 CSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ-ILKCGFMSHILLGN 392
Query: 308 AILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKP 367
A++DMYAKCGS+ AA EVF ++E++LVSW+SMI Y +G +A+ +F M G +
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 368 DDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYEL 427
DD+ F+ +L+AC+H GL+ E Q F T Y + EHY+C I+LLGR G + +A+E+
Sbjct: 453 DDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 428 ITSMPMQPCEAAWGALLNACRMHGNVELA-RLSACNLLSLDPEDSGIYVLLANICANERK 486
+MPM+P W +LL+AC HG +++A ++ A L+ +P++ YVLL+ I
Sbjct: 512 TINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGN 571
Query: 487 WGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEF 520
+ + VR +M+ + + K G S +E + + +++
Sbjct: 572 YHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 201/460 (43%), Gaps = 59/460 (12%)
Query: 41 LKACEELSGDFE-GESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKD 99
+KAC F G +HC+ K G D + +V N LI YA R+VFDE +D
Sbjct: 53 IKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRD 112
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDI-EMGRRVH 158
V++ ++ + AM+L M P + ++L+ C++MG ++ R H
Sbjct: 113 TVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFH 172
Query: 159 E-NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDL 217
+ + M+ S+ L AL+DMY+K AA +F
Sbjct: 173 ALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVF------------------------ 208
Query: 218 ENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC 277
DQ KN VSW+AM++G N + + LF M + P L+SVL AC
Sbjct: 209 -------DQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Query: 278 GQLSC-LNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS 336
+L+ +L IH F G H L A + MY +CG++ + +F R++V
Sbjct: 262 VELNYGSSLVKEIHG-FSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVM 320
Query: 337 WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTME 396
W+SMI+GYA G + +N+ +QMR G + + +T + +++AC++ L+S ++
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST-VHSQI 379
Query: 397 RNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN---- 452
G + +ID+ + G L A E+ + + +W +++NA +HG+
Sbjct: 380 LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDL-VSWSSMINAYGLHGHGSEA 438
Query: 453 -----------------VELARLSACNLLSLDPEDSGIYV 475
LA LSACN L E I+
Sbjct: 439 LEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 41/373 (10%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELS-GDFEGESVHCVV 60
W MI G +N + F M R + + + + L AC EL+ G + +H
Sbjct: 219 WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFS 278
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYA-SRNCSELA 119
+ G ++ + + Y G + +R +F+ S ++DVV W++M GYA + +CSE+
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEV- 337
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
M L N M + +E N VTL+A++SAC+ + VH + K + L NAL+DM
Sbjct: 338 MNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDM 397
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y KCGSL AARE+F + +D+ SW+SM+N Y L
Sbjct: 398 YAKCGSLSAAREVFYELTEKDLVSWSSMINAYG--------------------------L 431
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
G+ E+L++F M+ G ++ A +++LSAC + I F
Sbjct: 432 HGHGS-----EALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTI---FTQAGKY 483
Query: 300 HPSVTLAN--AILDMYAKCGSIEAAAEV-FNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
H VTL + +++ + G I+ A EV N + + W+S+++ +G+ A +
Sbjct: 484 HMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKI 543
Query: 357 FDQMRCMGFKPDD 369
M +PD+
Sbjct: 544 IAN-ELMKSEPDN 555
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 115/225 (51%), Gaps = 1/225 (0%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
MW++MI GY + + + + +M + +E + + + + AC + +VH +
Sbjct: 320 MWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQI 379
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K GF S +L+ N LI YA G L AREVF E + KD+V+W++M + Y A+
Sbjct: 380 LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEAL 439
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
E+F M++G E +++ +A+LSAC+ G +E + + K +M +L + +++
Sbjct: 440 EIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLL 499
Query: 181 VKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLENARRFL 224
+ G + A E+ M + W+S+++ G L+ A + +
Sbjct: 500 GRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKII 544
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 210/333 (63%), Gaps = 9/333 (2%)
Query: 85 LKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA 144
L++AR+ FD K VV+W M GYA +E A+ LFN MLR V PNE T + V+SA
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 145 CSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET-RDVFS 203
CS D + R + + +++K +R + + ALLDM+ KC + +AR +F+ + T R++ +
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT 333
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG- 262
W +M++GY + GD+ +AR+ D P +NVVSW++++AGY+ N + +++ F +M+ G
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
P+E ++SVLSACG ++ L LG I ++ + + + + +++ MYA+ G++ A
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCI-VDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
Query: 323 AEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
VF+ + ER++VS+N++ +AANG + +N+ +M+ G +PD +T+ ++LTAC+
Sbjct: 453 KRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRA 512
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLL 415
GL+ EGQ F ++ RN P +HY+CM DLL
Sbjct: 513 GLLKEGQRIFKSI-RN----PLADHYACM-DLL 539
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 214/451 (47%), Gaps = 77/451 (17%)
Query: 87 HAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACS 146
+ R +FD + +V +MF ++ + + + L+ R + P+ + V+ +
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 147 QMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR------- 199
+ G + +EK + N ++DMYVK S+ +AR++FD++ R
Sbjct: 118 RFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 200 ------------------------DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
DV SWT M+ G+AK DLENAR++ D+ P K+VVSW
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSW 232
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
+AML+GY+QN +++L+LF++M+ GV P E V V+SAC + +L + + +
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVK-LID 291
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFN---------------------------- 327
EK + + + A+LDM+AKC I++A +FN
Sbjct: 292 EKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSAR 351
Query: 328 ----AISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG-FKPDDITFVNLLTACSHG 382
+ +RN+VSWNS+IAGYA NGQA A+ F+ M G KPD++T +++L+AC H
Sbjct: 352 QLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGA 442
+ G + +N IK Y +I + R G L EA + M + ++
Sbjct: 412 ADLELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDV-VSYNT 469
Query: 443 LLNACRMHGNVELARLSACNLLSLDPEDSGI 473
L A +G+ + NLLS +D GI
Sbjct: 470 LFTAFAANGD----GVETLNLLS-KMKDEGI 495
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 143/323 (44%), Gaps = 64/323 (19%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSG-----------D 50
WN M+ GY + A F MLR V + ++V + AC + D
Sbjct: 232 WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLID 291
Query: 51 FEGESVHCVVR---------------------KLGFDSELLVRNGLIHFYADRGWLKHAR 89
+ ++C V+ +LG L+ N +I Y G + AR
Sbjct: 292 EKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSAR 351
Query: 90 EVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLML-RGDVEPNEVTLIAVLSACSQM 148
++FD ++VV+W ++ GYA + LA+E F M+ GD +P+EVT+I+VLSAC M
Sbjct: 352 QLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Query: 149 GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV 208
D+E+G + + + K ++ + + + +L+ MY + G+L A+ +FD M+ RDV S+ ++
Sbjct: 412 ADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLF 471
Query: 209 NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEH 268
+A GD E+L L +M G+ P+
Sbjct: 472 TAFAANGD-------------------------------GVETLNLLSKMKDEGIEPDRV 500
Query: 269 ALVSVLSACGQLSCLNLGHWIHQ 291
SVL+AC + L G I +
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFK 523
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRH-RVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN++I GY +A +F M+ + + D + + L AC ++ G+ + +
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
RK LI YA G L A+ VFDE +DVV++ T+F +A+ +
Sbjct: 425 RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETL 484
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
L + M +EP+ VT +VL+AC++ G ++ G+R+ K++R L H A +D+
Sbjct: 485 NLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF-----KSIRNPLADHYACMDL 538
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 258/515 (50%), Gaps = 43/515 (8%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV- 59
+WN++IR Y KA S F ++LR D +F +A A S F+ + + C+
Sbjct: 73 LWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPD--NFTYACLA-RGFSESFDTKGLRCIH 129
Query: 60 ----VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
V LGFD + + ++ Y+ G + A ++F D+ W M GY
Sbjct: 130 GIAIVSGLGFDQ--ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGF 187
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
+ + LFNLM +PN T++A+ S + + VH K N L+ H+
Sbjct: 188 WDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN----LDSHS- 242
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
YV C ++VN Y++C + +A + ++V+
Sbjct: 243 ----YVGC----------------------ALVNMYSRCMCIASACSVFNSISEPDLVAC 276
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
S+++ GYS+ KE+L LF E+ +G P+ + VL +C +LS G +H +VI
Sbjct: 277 SSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHS-YVI 335
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
G+ + + +A++DMY+KCG ++ A +F I E+N+VS+NS+I G +G A A
Sbjct: 336 RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFE 395
Query: 356 VFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLL 415
F ++ MG PD+ITF LL C H GL+++GQE F M+ +GI+P+ EHY M+ L+
Sbjct: 396 KFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLM 455
Query: 416 GRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIY- 474
G G L+EA+E + S+ GALL+ C +H N LA + A N+ E +Y
Sbjct: 456 GMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYK 515
Query: 475 VLLANICANERKWGDVKRVRSLMRDKGVKKIPGHS 509
V+L+N+ A +W +V+R+R + + K+PG S
Sbjct: 516 VMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 193/430 (44%), Gaps = 36/430 (8%)
Query: 54 ESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASR 113
+ +H V K + L FYA L AR++FD + V W ++ YA
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 114 NCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLH 173
+ + LF+ +LR D P+ T AC + R E+ + K +RC +H
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTY-----AC-------LARGFSESFDTKGLRC---IH 129
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
G + + FD++ +++V Y+K G + A + P ++
Sbjct: 130 ----------GIAIVSGLGFDQI------CGSAIVKAYSKAGLIVEASKLFCSIPDPDLA 173
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
W+ M+ GY + + LF+ M G P + +V++ S S L L W F
Sbjct: 174 LWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLL-LVAWSVHAF 232
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
++ + + A+++MY++C I +A VFN+ISE +LV+ +S+I GY+ G K+A
Sbjct: 233 CLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEA 292
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMID 413
+++F ++R G KPD + +L +C+ G+E + R G++ + S +ID
Sbjct: 293 LHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR-LGLELDIKVCSALID 351
Query: 414 LLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA--RLSACNLLSLDPEDS 471
+ + GLLK A L +P + ++ +L+ +HG A + + + L P++
Sbjct: 352 MYSKCGLLKCAMSLFAGIPEKNI-VSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEI 410
Query: 472 GIYVLLANIC 481
LL C
Sbjct: 411 TFSALLCTCC 420
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 229/422 (54%), Gaps = 6/422 (1%)
Query: 95 SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
S K + T+ Y + + ++ LF ML V+PN +T +++ A + G
Sbjct: 46 SRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYG 105
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKC 214
+H K+ + + + Y + G L ++R++FD + V + S+++ +
Sbjct: 106 VALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRN 165
Query: 215 GDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG---AGVVPEEHALV 271
G+++ A + + P +VVSW+ ++ G+S+ ++L +F EM+ A + P E V
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 272 SVLSACGQL--SCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
SVLS+C + LG IH +V+ K + + TL A+LDMY K G +E A +F+ I
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHG-YVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI 284
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
++ + +WN++I+ A+NG+ KQA+ +F+ M+ P+ IT + +LTAC+ L+ G
Sbjct: 285 RDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGI 344
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRM 449
+ F ++ Y I P EHY C++DL+GR GLL +A I S+P +P + GALL AC++
Sbjct: 345 QLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKI 404
Query: 450 HGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHS 509
H N EL L+ L P+ G YV L+ A + W + +++R M + G++KIP +S
Sbjct: 405 HENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Query: 510 LV 511
++
Sbjct: 465 VL 466
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 162/366 (44%), Gaps = 69/366 (18%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALK-ACEELSGDFEGESVHCV 59
++NT+IR Y + + F ML V+ + +F +K AC S + G ++H
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSY-GVALHGQ 111
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE------------------------- 94
K GF + V+ + FY + G L+ +R++FD+
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 95 ------SSLKDVVTWTTMFDGYASRNCSELAMELFNLML---RGDVEPNEVTLIAVLSAC 145
+ DVV+WTT+ +G++ + A+ +F M+ R + PNE T ++VLS+C
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 146 SQM--GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFS 203
+ G I +G+++H + K + + L ALLDMY K G L A +FD++ + V +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 204 WTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
W ++++ A N +PK++L++F M + V
Sbjct: 292 WNAIISALAS-------------------------------NGRPKQALEMFEMMKSSYV 320
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
P L+++L+AC + ++LG + E + P+ ++D+ + G + AA
Sbjct: 321 HPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAA 380
Query: 324 EVFNAI 329
++
Sbjct: 381 NFIQSL 386
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 197/333 (59%), Gaps = 11/333 (3%)
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHK-NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
TS+V Y+ GD++ AR+ D+TP K N+V W+AM++ Y++N E+++LF M +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 264 VPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG-MHPSVTLANAILDMYAKCGSIEAA 322
+ + LSAC L + +G I+ + K + +TL N++L+MY K G E A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 323 AEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG------FKPDDITFVNLL 376
++F+ +++ ++ SMI GYA NGQA++++ +F +M+ + P+D+TF+ +L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
ACSH GL+ EG+ +F +M +Y +KP+ H+ CM+DL R+G LK+A+E I MP++P
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
W LL AC +HGNVEL + LD + G YV L+NI A++ W + ++R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 497 MRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQ 529
+R +++PG S +E+ EF+ +++ +
Sbjct: 404 VRK---RRMPGKSWIELGSIINEFVSGPDNNDE 433
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 51/365 (13%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVE-----MDCRSFVFALK-ACEELSGDFEGESV 56
N ++ Y ++ P A F RHR +D S +FA+K + + + +G +
Sbjct: 32 NHTLKQYLESGEPIKALLDF----RHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQI 87
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK-DVVTWTTMFDGYASRNC 115
H +VRKLGF++ + ++ L+ FY+ G + +AR+VFDE+ K ++V WT M Y
Sbjct: 88 HALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENEN 147
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS--LNLH 173
S A+ELF M +E + V + LSAC+ +G ++MG ++ K+ R + L L
Sbjct: 148 SVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLR 207
Query: 174 NALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
N+LL+MYVK G AR+LFD +DV ++TSM+ GYA
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYA--------------------- 246
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEM------MGAGVVPEEHALVSVLSACGQLSCLNLGH 287
N + +ESL+LF +M + P + + VL AC + G
Sbjct: 247 ----------LNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAA 346
+ +++ + P ++D++ + G ++ A E N + + N V W +++ +
Sbjct: 297 RHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSL 356
Query: 347 NGQAK 351
+G +
Sbjct: 357 HGNVE 361
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 10/228 (4%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHC-- 58
+W MI Y + N A F RM ++E+D AL AC +L GE ++
Sbjct: 134 LWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRS 193
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
+ RK +L +RN L++ Y G + AR++FDES KDV T+T+M GYA ++
Sbjct: 194 IKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQE 253
Query: 119 AMELFNLMLRGD------VEPNEVTLIAVLSACSQMGDIEMGRRVHENM-EKKNMRCSLN 171
++ELF M D + PN+VT I VL ACS G +E G+R ++M N++
Sbjct: 254 SLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREA 313
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLE 218
++D++ + G L A E ++M + + W +++ + G++E
Sbjct: 314 HFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/578 (27%), Positives = 282/578 (48%), Gaps = 69/578 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVE---MDCRSFVFALKACEELSGDFEGESVHC 58
WNT++ K + AF F M +RVE +D + L +C + S G +H
Sbjct: 252 WNTVVSSLVKEGKSHKAFDLFYEM--NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG 309
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS------ 112
++G EL V N LI FY+ +K +++ +D VT+T M Y S
Sbjct: 310 RAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDS 369
Query: 113 ------------------------RNCSEL-AMELFNLMLRGDVEPNEVTLIAVLSACSQ 147
RN L A++LF ML+ VE + +L + + AC
Sbjct: 370 AVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGL 429
Query: 148 MGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSM 207
+ + ++ ++H K + + ALLDM +C + A E+FD+ W S
Sbjct: 430 VSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ--------WPS- 480
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM-GAGVVPE 266
+L++++ + ++++ GY++N P +++ LFH + + +
Sbjct: 481 --------NLDSSK------------ATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLD 520
Query: 267 EHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF 326
E +L +L+ CG L +G+ IH + ++ G ++L N+++ MYAKC + A ++F
Sbjct: 521 EVSLTLILAVCGTLGFREMGYQIHC-YALKAGYFSDISLGNSLISMYAKCCDSDDAIKIF 579
Query: 327 NAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTAC--SHGGL 384
N + E +++SWNS+I+ Y +A+ ++ +M KPD IT +++A +
Sbjct: 580 NTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNK 639
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALL 444
+S ++ F +M+ Y I+P EHY+ + +LG GLL+EA + I SMP+QP + ALL
Sbjct: 640 LSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALL 699
Query: 445 NACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKK 504
++CR+H N +A+ A +LS PE Y+L +NI + W + +R MR++G +K
Sbjct: 700 DSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRK 759
Query: 505 IPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFL 542
P S + + + F D SHPQ ++IY+ L+ + +
Sbjct: 760 HPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIM 797
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 194/407 (47%), Gaps = 11/407 (2%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRH-RVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+ +I G+ + A F RM + V+ + +FV L AC +S G +H ++
Sbjct: 148 YTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLI 207
Query: 61 RKLGFDSELLVRNGLIHFY-ADRG-WLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
K GF + + V N L+ Y D G ++FDE +DV +W T+ S
Sbjct: 208 VKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHK 267
Query: 119 AMELFNLMLRGD-VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A +LF M R + + TL +LS+C+ + GR +H + + L+++NAL+
Sbjct: 268 AFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALI 327
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSA 237
Y K + L++ M +D ++T M+ Y G +++A KN ++++A
Sbjct: 328 GFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNA 387
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
++AG+ +N ++LKLF +M+ GV + +L S + ACG +S + IH F I+
Sbjct: 388 LMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG-FCIKF 446
Query: 298 GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS---WNSMIAGYAANGQAKQAV 354
G + + A+LDM +C + A E+F+ NL S S+I GYA NG +AV
Sbjct: 447 GTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAV 505
Query: 355 NVFDQMRC-MGFKPDDITFVNLLTACSHGGLISEG-QEYFYTMERNY 399
++F + C D+++ +L C G G Q + Y ++ Y
Sbjct: 506 SLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 178/402 (44%), Gaps = 82/402 (20%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR-GDV 131
N LI Y G+ + A VF S VV++T + G++ N A+++F M + G V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 132 EPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK-----CGSL 186
+PNE T +A+L+AC ++ +G ++H + K S+ + N+L+ +Y K C +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 187 VAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNN 246
+ +LFD + RDV SW ++V+ K G
Sbjct: 238 L---KLFDEIPQRDVASWNTVVSSLVKEG------------------------------- 263
Query: 247 KPKESLKLFHEM---MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSV 303
K ++ LF+EM G GV + L ++LS+C S L G +H I G+ +
Sbjct: 264 KSHKAFDLFYEMNRVEGFGV--DSFTLSTLLSSCTDSSVLLRGRELHGR-AIRIGLMQEL 320
Query: 304 TLANAILDMYAK-------------------------------CGSIEAAAEVFNAISER 332
++ NA++ Y+K G +++A E+F ++E+
Sbjct: 321 SVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEK 380
Query: 333 NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ--E 390
N +++N+++AG+ NG +A+ +F M G + D + + + AC GL+SE + E
Sbjct: 381 NTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKKVSE 437
Query: 391 YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP 432
+ +G + ++D+ R + +A E+ P
Sbjct: 438 QIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 305 LANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG 364
L NA++ Y K G A VF ++S +VS+ ++I+G++ +A+ VF +MR G
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 365 F-KPDDITFVNLLTAC 379
+P++ TFV +LTAC
Sbjct: 176 LVQPNEYTFVAILTAC 191
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 249/519 (47%), Gaps = 63/519 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFA-----LKACEELSGDFEGESV 56
WN+MI + + + A + F ++ E C F + L +C+ G+SV
Sbjct: 463 WNSMISAFSQNGFTHKAKNLFKEVVS---EYSCSKFSLSTVLAILTSCDSSDSLIFGKSV 519
Query: 57 HCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
HC ++KLG + +R E E+ +D+ +W ++ G AS
Sbjct: 520 HCWLQKLGDLTSAFLR----------------LETMSET--RDLTSWNSVISGCASSGHH 561
Query: 117 ELAMELFNLMLR-GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
++ F M R G + + +TL+ +SA +G + GR H K L N
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
L+ MY +C D+E+A + N+ SW
Sbjct: 622 LITMY-------------------------------GRCKDIESAVKVFGLISDPNLCSW 650
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
+ +++ SQN +E +LF + + P E V +LSA QL + G H H +I
Sbjct: 651 NCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCH-LI 706
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
+G + ++ A++DMY+ CG +E +VF ++ +WNS+I+ + +G ++A+
Sbjct: 707 RRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAME 766
Query: 356 VFDQMRCMG-FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
+F ++ +P+ +F++LL+ACSH G I EG Y+ ME +G+KP EH ++D+
Sbjct: 767 LFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDM 826
Query: 415 LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIY 474
LGR G L+EAYE IT + WGALL+AC HG+ +L + A L ++P+++ Y
Sbjct: 827 LGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYY 886
Query: 475 VLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV 513
+ LAN W + R+R ++ D +KK+PG+S+++V
Sbjct: 887 ISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 187/406 (46%), Gaps = 36/406 (8%)
Query: 55 SVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRN 114
SVHC K G +L + L+ FY G L + +FDE KDV+ W +M
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
A+ LF M+ E + TL+ SA S + +H + + +L N
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCN 227
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
AL+++Y K +L +A +F ME RD+ SW +++ KC
Sbjct: 228 ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT---KC-------------------- 264
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
LA N P++SL+ F M G+G + V+SAC + L LG +H V
Sbjct: 265 ----LA----NGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHG-LV 315
Query: 295 IEKGMHPS--VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
I+ G P V++ N+I+ MY+KCG EAA VF + R+++S N+++ G+AANG ++
Sbjct: 316 IKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 353 AVNVFDQMRCMG-FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
A + +QM+ + +PD T V++ + C EG+ R E + +
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV 435
Query: 412 IDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
ID+ G+ GL +A EL+ +W ++++A +G A+
Sbjct: 436 IDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAK 480
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 36/384 (9%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+WN+MI + A F+ M+ E D + + A A L + +HC+
Sbjct: 155 VWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLA 214
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
+ G + + N L++ YA L A VF +D+V+W T+ + ++
Sbjct: 215 IETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSL 274
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+ F M E + VT V+SACS + ++ +G +H +
Sbjct: 275 QYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLH-------------------GLV 315
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
+K G A V S+++ Y+KCGD E A ++ ++V+S +A+L
Sbjct: 316 IKSGYSPEAH----------VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 241 GYSQNNKPKESLKLFHEMMGAG-VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
G++ N +E+ + ++M + P+ +VS+ S CG LS G +H + V +
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQ 425
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
++ + N+++DMY KCG A +F + R+LVSWNSMI+ ++ NG +A N+F +
Sbjct: 426 SRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKE 485
Query: 360 M----RCMGFKPDDITFVNLLTAC 379
+ C F T + +LT+C
Sbjct: 486 VVSEYSCSKFSLS--TVLAILTSC 507
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 215/399 (53%), Gaps = 6/399 (1%)
Query: 39 FALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK 98
+ L+ C S + + +H + K ++ L+ LI + G ++A VF++
Sbjct: 25 YFLRTCSNFS---QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRG-DVEPNEVTLIAVLSACSQMGDIEMGRRV 157
TW M + + A+ LF LM+ + ++ T V+ AC I +G +V
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 158 HENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDL 217
H K + N L+D+Y KCG + R++FD+M R + SWT+M+ G L
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 218 ENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC 277
++A +Q P +NVVSW+AM+ Y +N +P E+ +LF M V P E +V++L A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 278 GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSW 337
QL L++G W+H + + G L A++DMY+KCGS++ A +VF+ + ++L +W
Sbjct: 262 TQLGSLSMGRWVHD-YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 338 NSMIAGYAANGQAKQAVNVFDQMRCMG-FKPDDITFVNLLTACSHGGLISEGQEYFYTME 396
NSMI +G ++A+++F++M +PD ITFV +L+AC++ G + +G YF M
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 397 RNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQP 435
+ YGI P REH +CMI LL + +++A L+ SM P
Sbjct: 381 QVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 142/307 (46%), Gaps = 41/307 (13%)
Query: 2 WNTMIRGYRKARNPNIAFSYF-LRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN MIR P A F L M+ H+ + D +F F +KAC S G VH +
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYAS-------- 112
K GF +++ +N L+ Y G R+VFD+ + +V+WTTM G S
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 113 --------RNC---------------SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMG 149
RN + A +LF M DV+PNE T++ +L A +Q+G
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 150 DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVN 209
+ MGR VH+ K L AL+DMY KCGSL AR++FD M+ + + +W SM+
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 210 --GYAKCGDLENARRFLDQTPHKNV----VSWSAMLAGYSQNNKPKESLKLFHEMMGA-G 262
G CG+ E F + +V +++ +L+ + K+ L+ F M+ G
Sbjct: 326 SLGVHGCGE-EALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYG 384
Query: 263 VVP-EEH 268
+ P EH
Sbjct: 385 ISPIREH 391
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI Y K R P+ AF F RM V+ + + V L+A +L G VH
Sbjct: 219 WTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAH 278
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K GF + + LI Y+ G L+ AR+VFD K + TW +M C E A+
Sbjct: 279 KNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALS 338
Query: 122 LF-NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
LF + VEP+ +T + VLSAC+ G+++ G R M + + HNA
Sbjct: 339 LFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNA 393
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 161/544 (29%), Positives = 253/544 (46%), Gaps = 37/544 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W +I GY +A N F F ML H C F L + G+ VH +
Sbjct: 130 WTALITGYVQAGNEQEGFCLFSSMLSH-----CFPNEFTLSSVLTSCRYEPGKQVHGLAL 184
Query: 62 KLGFDSELLVRNGLIHFYA---DRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
KLG + V N +I Y D A VF+ K++VTW +M + N +
Sbjct: 185 KLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKK 244
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A+ +F M V + TL+ + S+ + D+ + + +C L LH+
Sbjct: 245 AIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL---------VPNEVSKCCLQLHS---- 291
Query: 179 MYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAM 238
+ VK G LV E+ T + ++ M+ Y C L F++ + +++V+W+ +
Sbjct: 292 LTVKSG-LVTQTEV----ATALIKVYSEMLEDYTDCYKL-----FMEMSHCRDIVAWNGI 341
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+ ++ + P+ ++ LF ++ + P+ + SVL AC L IH VI+ G
Sbjct: 342 ITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQ-VIKGG 399
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFD 358
L N+++ YAKCGS++ VF+ + R++VSWNSM+ Y+ +GQ + VF
Sbjct: 400 FLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ 459
Query: 359 QMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+M PD TF+ LL+ACSH G + EG F +M P+ HY+C+ID+L R
Sbjct: 460 KM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRA 516
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSL-DPEDSGIYVLL 477
EA E+I MPM P W ALL +CR HGN L +L+A L L +P +S Y+ +
Sbjct: 517 ERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQM 576
Query: 478 ANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
+NI E + + M V+K P S E+ + EF P E +Y+ L
Sbjct: 577 SNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYREL 636
Query: 538 DEIF 541
+
Sbjct: 637 KRLI 640
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 217/483 (44%), Gaps = 63/483 (13%)
Query: 35 RSFVFALKACEELSGDFEGESVH--CVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVF 92
+++ +AC E +G ++H + + +++ N LI+ YA G + +AR+VF
Sbjct: 60 QAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 93 DESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIE 152
D ++VV+WT + GY + LF+ ML PNE TL +VL++C E
Sbjct: 120 DTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCR----YE 174
Query: 153 MGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYA 212
G++VH K + CS+ + NA++ MY +C AA E +WT
Sbjct: 175 PGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYE-----------AWT------- 216
Query: 213 KCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVS 272
+ KN+V+W++M+A + N K+++ +F M GV + L++
Sbjct: 217 ----------VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Query: 273 VLSACGQLS----------CLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
+ S+ + S CL L ++ G+ +A A++ +Y++ +E
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQL-----HSLTVKSGLVTQTEVATALIKVYSE--MLEDY 319
Query: 323 AEVFNAISE----RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
+ + E R++V+WN +I +A ++A+++F Q+R PD TF ++L A
Sbjct: 320 TDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKA 378
Query: 379 CSHGGLISEGQEY-FYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE 437
C+ GL++ + G + +I + G L + M +
Sbjct: 379 CA--GLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDV- 435
Query: 438 AAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLM 497
+W ++L A +HG V+ + L + ++P DS ++ L + C++ + + R+ M
Sbjct: 436 VSWNSMLKAYSLHGQVD-SILPVFQKMDINP-DSATFIALLSACSHAGRVEEGLRIFRSM 493
Query: 498 RDK 500
+K
Sbjct: 494 FEK 496
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 267 EHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP-----SVTLANAILDMYAKCGSIEA 321
+ A ++ AC + L G +H H + HP +V LAN +++MYAKCG+I
Sbjct: 59 QQAYAALFQACAEQRNLLDGINLHHHML----SHPYCYSQNVILANFLINMYAKCGNILY 114
Query: 322 AAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
A +VF+ + ERN+VSW ++I GY G ++ +F M F P++ T ++LT+C +
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY 173
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 249/509 (48%), Gaps = 48/509 (9%)
Query: 11 KARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELL 70
++ NPN + FL++ R ++ +F L AC LS G VH ++ K G ++ +
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 71 VRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD 130
+ LI Y+ G L + VF+ KD+V+W + G+ + A+ +F M R
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 131 VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAR 190
VE +E TL +V+ C+ + ++ G++VH + +V R
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMV------------------------VVTGR 216
Query: 191 ELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQ-TPHKNVVSWSAMLAGYSQNNKPK 249
+L V T+M++ Y+ G + A + + H + V +++++G +N K
Sbjct: 217 DL--------VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYK 268
Query: 250 ESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAI 309
E+ L P L S L+ C S L +G IH + G L N +
Sbjct: 269 EAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIH-CVALRNGFVSDSKLCNGL 322
Query: 310 LDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM--RCMGFKP 367
+DMY KCG I A +F AI +++VSW SMI YA NG +A+ +F +M G P
Sbjct: 323 MDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP 382
Query: 368 DDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYEL 427
+ +TF+ +++AC+H GL+ EG+E F M+ Y + P EHY C ID+L + G +E + L
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRL 442
Query: 428 ITSM-----PMQPCEAAWGALLNACRMHGNVELARLSACNLL-SLDPEDSGIYVLLANIC 481
+ M PC A W A+L+AC ++ ++ A L+ PE++ IYVL++N
Sbjct: 443 VERMMENDNQSIPC-AIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFY 501
Query: 482 ANERKWGDVKRVRSLMRDKGVKKIPGHSL 510
A KW V+ +R +++KG+ K GHSL
Sbjct: 502 AAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 203/464 (43%), Gaps = 53/464 (11%)
Query: 82 RGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAV 141
R + HA +FDE +D+ + + + + LF + R + + T V
Sbjct: 31 RNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPV 90
Query: 142 LSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDV 201
L ACS + E GR+VH M K+ AL+DMY K G LV + +F+ +E +D+
Sbjct: 91 LGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDL 150
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
SW +A+L+G+ +N K KE+L +F M
Sbjct: 151 VSW-------------------------------NALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEA 321
V E L SV+ C L L G +H V+ V L A++ Y+ G I
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINE 237
Query: 322 AAEVFNAIS-ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS 380
A +V+N+++ + V NS+I+G N K+A + + R P+ + L CS
Sbjct: 238 AMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCS 292
Query: 381 HGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAW 440
+ G++ RN G + + ++D+ G+ G + +A + ++P + +W
Sbjct: 293 DNSDLWIGKQIHCVALRN-GFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSV-VSW 350
Query: 441 GALLNACRMHGN----VELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
++++A ++G+ +E+ R C S +S ++++ + CA+ + K +
Sbjct: 351 TSMIDAYAVNGDGVKALEIFR-EMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGM 409
Query: 497 MRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
M++K + +PG + F+ ++EEI+++++ +
Sbjct: 410 MKEK-YRLVPGTE------HYVCFIDILSKAGETEEIWRLVERM 446
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 138/323 (42%), Gaps = 42/323 (13%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN ++ G+ + A F M R RVE+ + +K C L +G+ VH +V
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL-KDVVTWTTMFDG-YASRNCSELA 119
G D +L +I FY+ G + A +V++ ++ D V ++ G +RN
Sbjct: 213 VTGRDLVVL-GTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYK--- 268
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
E F LM R PN L + L+ CS D+ +G+++H + L N L+DM
Sbjct: 269 -EAFLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDM 325
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
Y KCG +V AR +F + ++ V SWTSM++ YA GD
Sbjct: 326 YGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGD----------------------- 362
Query: 240 AGYSQNNKPKESLKLFHEMM--GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
++L++F EM G+GV+P + V+SAC + G +
Sbjct: 363 --------GVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 298 GMHPSVTLANAILDMYAKCGSIE 320
+ P +D+ +K G E
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETE 437
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 227/447 (50%), Gaps = 7/447 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +I K+ NP A F+ M H + ++V L + G +H ++
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G ++ +++ N LI FYA G L+ +R FD K++V W + GYA+++ + +
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLS 402
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF ML+ P E T L +C + +++H + + + + ++L+ Y
Sbjct: 403 LFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNG-YAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
K + A L D ++V G Y++ G + + + + VSW+ +A
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
S+++ +E ++LF M+ + + P+++ VS+LS C +L L LG IH
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC 578
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+ N ++DMY KCGSI + +VF E+NL++W ++I+ +G ++A+ F +
Sbjct: 579 ADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKET 638
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
+GFKPD ++F+++LTAC HGG++ EG F M ++YG++P+ +HY C +DLL R G
Sbjct: 639 LSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGY 697
Query: 421 LKEAYELITSMPMQPCEAAWGALLNAC 447
LKEA LI MP W L+ C
Sbjct: 698 LKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 216/474 (45%), Gaps = 64/474 (13%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NT+I+GY K + + A+ F M R+ + +S V L +C L G +H +
Sbjct: 83 FNTIIKGYSKYGDVDKAWGVFSEM-RYFGYLPNQSTVSGLLSCASLDVR-AGTQLHGLSL 140
Query: 62 KLG-FDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
K G F ++ V L+ Y L+ A +VF++ K + TW M R + M
Sbjct: 141 KYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECM 200
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
F ++R E + + VL S + D+++ +++H + KK + C +++ N+L+ Y
Sbjct: 201 FFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAY 260
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KCG+ A +F +D SW ++VSW+A++
Sbjct: 261 GKCGNTHMAERMF-----QDAGSW--------------------------DIVSWNAIIC 289
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
+++ P ++LKLF M G P + VSVL + L+ G IH +I+ G
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG-MLIKNGCE 348
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+ L NA++D YAKCG++E + F+ I ++N+V WN++++GY AN +++F QM
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY-ANKDGPICLSLFLQM 407
Query: 361 RCMGFKPDDITFVNLLTACS-------HGGLISEGQE----YFYTMERNYGIKPKREHYS 409
MGF+P + TF L +C H ++ G E ++ R+Y
Sbjct: 408 LQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 410 CMID----------------LLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
++D + R G E+ +LI+++ QP +W + AC
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
V + N I+ +Y K G + A +VF+ + ERN VS+N++I GY+ G +A VF +MR
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY-SCMIDLLGRTGLL 421
G+ P+ T LL+ S L + + YG+ +C++ L GR LL
Sbjct: 109 FGYLPNQSTVSGLLSCAS---LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLL 165
Query: 422 KEAYELITSMPMQPCEAAWGALLN 445
+ A ++ MP + E W +++
Sbjct: 166 EMAEQVFEDMPFKSLE-TWNHMMS 188
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 199 RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM 258
+ V+ ++++ Y K G++ A + DQ P +N VS++ ++ GYS+ ++ +F EM
Sbjct: 47 QPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM 106
Query: 259 MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGS 318
G +P + + VS L +C L + G +H + + +L +Y +
Sbjct: 107 RYFGYLPNQ-STVSGLLSCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 319 IEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
+E A +VF + ++L +WN M++ G K+ + F ++ MG + +F+ +L
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 379 CS 380
S
Sbjct: 225 VS 226
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 220/421 (52%), Gaps = 34/421 (8%)
Query: 90 EVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD-VEPNEVTLIAVLSACSQM 148
VF +++ +W + ++ + +++LF M R V P++ TL +L ACS
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 149 GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMV 208
+ + G +H K SL + +AL+ MYV G L+
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLL--------------------- 186
Query: 209 NGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEH 268
+AR+ D P ++ V ++AM GY Q + L +F EM +G +
Sbjct: 187 ----------HARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSV 236
Query: 269 ALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
+VS+L ACGQL L G +H + I + + L NAI DMY KC ++ A VF
Sbjct: 237 VMVSLLMACGQLGALKHGKSVHG-WCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVN 295
Query: 329 ISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG 388
+S R+++SW+S+I GY +G + +FD+M G +P+ +TF+ +L+AC+HGGL+ +
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 389 QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACR 448
YF M+ Y I P+ +HY+ + D + R GLL+EA + + MP++P EA GA+L+ C+
Sbjct: 356 WLYFRLMQ-EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCK 414
Query: 449 MHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGH 508
++GNVE+ A L+ L P + YV LA + + ++ + + +R M++K + K+PG
Sbjct: 415 VYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGC 474
Query: 509 S 509
S
Sbjct: 475 S 475
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 150/322 (46%), Gaps = 33/322 (10%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHR-VEMDCRSFVFALKACEELSGDFEGESVHCVV 60
WN +I + ++ + + FLRM R V D + L+AC G+ +H +
Sbjct: 101 WNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLC 160
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
KLGF S L V + L+ Y D G L HAR++FD+ ++D V +T MF GY + + L +
Sbjct: 161 LKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGL 220
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+F M + V ++++L AC Q+G ++ G+ VH ++ LNL NA+ DMY
Sbjct: 221 AMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMY 280
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
VKC L A +F M RDV SW+S++ GY GD+
Sbjct: 281 VKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVM--------------------- 319
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
S KLF EM+ G+ P + VLSAC L W++ + E +
Sbjct: 320 ----------SFKLFDEMLKEGIEPNAVTFLGVLSACAH-GGLVEKSWLYFRLMQEYNIV 368
Query: 301 PSVTLANAILDMYAKCGSIEAA 322
P + ++ D ++ G +E A
Sbjct: 369 PELKHYASVADCMSRAGLLEEA 390
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 16/261 (6%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVH--C 58
++ M GY + + + F M +D V L AC +L G+SVH C
Sbjct: 202 LYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWC 261
Query: 59 VVR--KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCS 116
+ R LG + + N + Y L +A VF S +DV++W+++ GY
Sbjct: 262 IRRCSCLGLN----LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDV 317
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
++ +LF+ ML+ +EPN VT + VLSAC+ G +E M++ N+ L + ++
Sbjct: 318 VMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASV 377
Query: 177 LDMYVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLE----NARRFLDQTPHKN 231
D + G L A + + M + D ++++G G++E AR + P K
Sbjct: 378 ADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRK- 436
Query: 232 VVSWSAMLAG-YSQNNKPKES 251
S+ LAG YS + E+
Sbjct: 437 -ASYYVTLAGLYSAAGRFDEA 456
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 187/313 (59%), Gaps = 7/313 (2%)
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQN---NKPKESLKLFH 256
D F ++V YA CG L AR ++ ++ +W+ +LA Y+ + + +E L LF
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
M V P E +LV+++ +C L G W H +V++ + + + +++D+Y+KC
Sbjct: 209 RMQ---VRPNELSLVALIKSCANLGEFVRGVWAHV-YVLKNNLTLNQFVGTSLIDLYSKC 264
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G + A +VF+ +S+R++ +N+MI G A +G ++ + ++ + G PD TFV +
Sbjct: 265 GCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTI 324
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
+ACSH GL+ EG + F +M+ YGI+PK EHY C++DLLGR+G L+EA E I MP++P
Sbjct: 325 SACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPN 384
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
W + L + + HG+ E ++ +LL L+ E+SG YVLL+NI A +W DV++ R L
Sbjct: 385 ATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
Query: 497 MRDKGVKKIPGHS 509
M+D V K PG S
Sbjct: 445 MKDHRVNKSPGIS 457
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 160/359 (44%), Gaps = 43/359 (11%)
Query: 1 MWNTMIRGYRKARN---PNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSG-----DFE 52
++NT+I N ++AFS + ++L R R F + + SG
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNF-VRPNEFTYPSLFKASGFDAQWHRH 131
Query: 53 GESVHCVVRKL--GFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGY 110
G ++H V K + + V+ L+ FYA+ G L+ AR +F+ D+ TW T+ Y
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 111 ASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSL 170
A+ + E+ L +R V PNE++L+A++ +C+ +G+ G H + K N+ +
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ 251
Query: 171 NLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK 230
+ +L+D+Y KCG L AR++FD M RDV + +M+ G A
Sbjct: 252 FVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLA------------------ 293
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
+ G+ Q E ++L+ ++ G+VP+ V +SAC ++ G I
Sbjct: 294 --------VHGFGQ-----EGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIF 340
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAANG 348
G+ P V ++D+ + G +E A E + + N W S + +G
Sbjct: 341 NSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 191/324 (58%), Gaps = 19/324 (5%)
Query: 205 TSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQ-----NNKPKESLKLFHEMM 259
T++++ YAK GDL AR+ D+ P + V+W+AM+ GY N+ ++++ LF
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 260 --GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK-GMHPSVT--LANAILDMYA 314
G+GV P + +V VLSA Q L +G +H + IEK G P V + A++DMY+
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY--IEKLGFTPEVDVFIGTALVDMYS 268
Query: 315 KCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVN 374
KCG + A VF + +N+ +W SM G A NG+ + N+ ++M G KP++ITF +
Sbjct: 269 KCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTS 328
Query: 375 LLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
LL+A H GL+ EG E F +M+ +G+ P EHY C++DLLG+ G ++EAY+ I +MP++
Sbjct: 329 LLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Query: 435 PCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI-------YVLLANICANERKW 487
P +L NAC ++G + LL ++ ED + YV L+N+ A++ KW
Sbjct: 389 PDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKW 448
Query: 488 GDVKRVRSLMRDKGVKKIPGHSLV 511
+V+++R M+++ +K PG+S V
Sbjct: 449 VEVEKLRKEMKERRIKTRPGYSFV 472
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 158/370 (42%), Gaps = 80/370 (21%)
Query: 35 RSFVFALKACEELSGDFE---GESVHCVVRKLGF--DSELLVRNGLIHFYADRGWLKHAR 89
R+FVF L AC + G VH +V+KLGF +SEL + L+HFYA G L++AR
Sbjct: 109 RTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYAR 167
Query: 90 EVFDESSLKDVVTWTTMFDGYASR-----NCSELAMELFNLM--LRGDVEPNEVTLIAVL 142
+VFDE + VTW M GY S + + AM LF V P + T++ VL
Sbjct: 168 KVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVL 227
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLN--LHNALLDMYVKCGSLVAARELFDRMETRD 200
SA SQ G +E+G VH +EK ++ + AL+DMY KCG L A +F+ M+ ++
Sbjct: 228 SAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKN 287
Query: 201 VFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
VF+WTSM G A N + E+ L + M
Sbjct: 288 VFTWTSMATGLA-------------------------------LNGRGNETPNLLNRMAE 316
Query: 261 AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
+G+ P E S+LSA + + G + + G+ P + I+D+ K G I+
Sbjct: 317 SGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQ 376
Query: 321 AAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS 380
A + A M KPD I +L ACS
Sbjct: 377 EAYQFILA----------------------------------MPIKPDAILLRSLCNACS 402
Query: 381 HGGLISEGQE 390
G G+E
Sbjct: 403 IYGETVMGEE 412
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 15/228 (6%)
Query: 2 WNTMIRGY--------RKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE- 52
WN MI GY AR + F F V + V L A + +G E
Sbjct: 181 WNAMIGGYCSHKDKGNHNARKAMVLFRRF-SCCGSGVRPTDTTMVCVLSAISQ-TGLLEI 238
Query: 53 GESVHCVVRKLGFDSEL--LVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGY 110
G VH + KLGF E+ + L+ Y+ G L +A VF+ +K+V TWT+M G
Sbjct: 239 GSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGL 298
Query: 111 ASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKK-NMRCS 169
A L N M ++PNE+T ++LSA +G +E G + ++M+ + +
Sbjct: 299 ALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPV 358
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGD 216
+ + ++D+ K G + A + M + D S+ N + G+
Sbjct: 359 IEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGE 406
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 246 NKPKESLKLF--HEMMGAGVVPEEHALVSVLSACGQLSC---LNLGHWIHQHFVIEKGMH 300
+KP++S+++F + + + E V VL AC + + L +G +H ++
Sbjct: 85 SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLY 144
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAA-----NGQAKQAVN 355
S + +L YAK G + A +VF+ + ER V+WN+MI GY + N A++A+
Sbjct: 145 ESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMV 204
Query: 356 VFDQMRC--MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHY--SCM 411
+F + C G +P D T V +L+A S GL+ G +E+ G P+ + + + +
Sbjct: 205 LFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK-LGFTPEVDVFIGTAL 263
Query: 412 IDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHG 451
+D+ + G L A+ + M ++ W ++ ++G
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKVKNV-FTWTSMATGLALNG 302
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 233/496 (46%), Gaps = 65/496 (13%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN ++R Y + + A F +ML V + + AC G+ +H +
Sbjct: 231 WNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAV 290
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
KL ++ +V + Y L+ AR VFD++ KD+ +WT+ GYA + A E
Sbjct: 291 KLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARE 350
Query: 122 LFNLM------------------------------LRGDVEP-NEVTLIAVLSACSQMGD 150
LF+LM +R ++E + VTL+ +L+ CS + D
Sbjct: 351 LFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISD 410
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNG 210
++MG++ H + + ++ + NALLDMY
Sbjct: 411 VQMGKQAHGFIYRHGYDTNVIVANALLDMY------------------------------ 440
Query: 211 YAKCGDLENARRFLDQTPH-KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
KCG L++A + Q ++ VSW+A+L G ++ + +++L F E M P ++
Sbjct: 441 -GKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYT 498
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
L ++L+ C + LNLG IH F+I G V + A++DMY+KC + A EVF
Sbjct: 499 LATLLAGCANIPALNLGKAIHG-FLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA 557
Query: 330 SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
+ R+L+ WNS+I G NG++K+ +F + G KPD +TF+ +L AC G + G
Sbjct: 558 ATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGF 617
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRM 449
+YF +M Y I P+ EHY CMI+L + G L + E + MP P + +AC+
Sbjct: 618 QYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQR 677
Query: 450 HGNVELARLSACNLLS 465
+ +L +A L++
Sbjct: 678 YRWSKLGAWAAKRLMN 693
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 236/489 (48%), Gaps = 36/489 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WN +I + + F F RM R V SF LK+C + +HC V
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVV 189
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K G+ + + ++ Y + AR VFDE V+W + Y ++ A+
Sbjct: 190 KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVV 249
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+F ML +V P T+ +V+ ACS+ +E+G+ +H K ++ + ++ DMYV
Sbjct: 250 MFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYV 309
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KC L +AR +FD+ ++D+ SWTS ++GYA G AR D P +N+VSW+AML G
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGG 369
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
Y ++ E+L M + LV +L+ C +S + +G H F+ G
Sbjct: 370 YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHG-FIYRHGYDT 428
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISE-RNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
+V +ANA+LDMY KCG++++A F +SE R+ VSWN+++ G A G+++QA++ F+ M
Sbjct: 429 NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
Query: 361 RCMGFKPDDITFVNLLTACS-----------HGGLISEGQEY----------FYTMER-- 397
+ KP T LL C+ HG LI +G + Y+ R
Sbjct: 489 QVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCF 547
Query: 398 NYGIKPKREH-------YSCMIDLLGRTGLLKEAYELITSMP---MQPCEAAWGALLNAC 447
+Y I+ +E ++ +I R G KE +EL + ++P + +L AC
Sbjct: 548 DYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
Query: 448 RMHGNVELA 456
G+VEL
Sbjct: 608 IREGHVELG 616
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 189/448 (42%), Gaps = 68/448 (15%)
Query: 69 LLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR 128
+ + N I Y G + ARE+F+E +D +W + A S+ +F M R
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVA 188
V E + VL +C + D+ + R++H + K +++L +++D+Y KC +
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 189 ARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKP 248
AR +FD + SW +V RR+L+ G++
Sbjct: 216 ARRVFDEIVNPSDVSWNVIV------------RRYLEM--------------GFND---- 245
Query: 249 KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANA 308
E++ +F +M+ V P H + SV+ AC + L +G IH ++ + ++ +
Sbjct: 246 -EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHA-IAVKLSVVADTVVSTS 303
Query: 309 ILDMYAKCGSIEA-------------------------------AAEVFNAISERNLVSW 337
+ DMY KC +E+ A E+F+ + ERN+VSW
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 338 NSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMER 397
N+M+ GY + +A++ MR D++T V +L CS + G++ + R
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 398 NYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELAR 457
+G + ++D+ G+ G L+ A M E +W ALL G E A
Sbjct: 424 -HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA- 481
Query: 458 LSACNLLSLD--PEDSGIYVLLANICAN 483
LS + ++ P + LLA CAN
Sbjct: 482 LSFFEGMQVEAKPSKYTLATLLAG-CAN 508
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Query: 273 VLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER 332
+ +C + + + H V + P + L N ++ Y KCG ++ A E+F + ER
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPL-PPIFLLNRAIEAYGKCGCVDDARELFEEMPER 125
Query: 333 NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ--E 390
+ SWN++I A NG + + +F +M G + + +F +L +C GLI + +
Sbjct: 126 DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLR 182
Query: 391 YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALL 444
+ YG + + ++D+ G+ ++ +A + + + P + +W ++
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV 235
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 247/516 (47%), Gaps = 48/516 (9%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N ++R + + F +LRM V + ++ + ++ C +EG+ +H +V K
Sbjct: 182 NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK 241
Query: 63 LGFD-SELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
G++ S + V N L+ +Y+ G L + F+ KDV++W ++ A +++
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS-LNLHNALLDMY 180
LF+ M P+ ++ L+ CS+ DI+ G+++H + K S L++ +AL+DMY
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KC +EN+ P N+ ++++
Sbjct: 362 -------------------------------GKCNGIENSALLYQSLPCLNLECCNSLMT 390
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV-----I 295
K+ +++F M+ G +E L +VL A L+L +H + I
Sbjct: 391 SLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAI 446
Query: 296 EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVN 355
+ G V ++ +++D Y K G E + +VF+ + N+ S+I GYA NG V
Sbjct: 447 KSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVK 506
Query: 356 VFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLL 415
+ +M M PD++T +++L+ CSH GL+ EG+ F ++E YGI P R+ Y+CM+DLL
Sbjct: 507 MLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLL 566
Query: 416 GRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYV 475
GR GL+++A L+ AW +LL +CR+H N + R +A L++L+PE+ +Y+
Sbjct: 567 GRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYI 626
Query: 476 LLANICAN------ERKWGDVKRVRSLMRDKGVKKI 505
++ R+ ++ R LMR+ G +
Sbjct: 627 QVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 169/369 (45%), Gaps = 40/369 (10%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
G L A E FDE S++DVVT+ + G + CS A+EL+ M+ + + T +VL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLV-AARELFDRMETRDV 201
S CS G +VH + C++ + +AL+ +Y C LV A +LFD M R
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDR-- 176
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGA 261
N+ + +L + Q + K +++ M
Sbjct: 177 -----------------------------NLAVCNLLLRCFCQTGESKRLFEVYLRMELE 207
Query: 262 GVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS-VTLANAILDMYAKCGSIE 320
GV ++ C + G +H V++ G + S + +AN ++D Y+ CG +
Sbjct: 208 GVAKNGLTYCYMIRGCSHDRLVYEGKQLHS-LVVKSGWNISNIFVANVLVDYYSACGDLS 266
Query: 321 AAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACS 380
+ FNA+ E++++SWNS+++ A G ++++F +M+ G +P F++ L CS
Sbjct: 267 GSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCS 326
Query: 381 HGGLISEGQE-YFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP---MQPC 436
I G++ + Y ++ + + S +ID+ G+ ++ + L S+P ++ C
Sbjct: 327 RNSDIQSGKQIHCYVLKMGFDVSSLHVQ-SALIDMYGKCNGIENSALLYQSLPCLNLECC 385
Query: 437 EAAWGALLN 445
+ +L++
Sbjct: 386 NSLMTSLMH 394
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 163/381 (42%), Gaps = 34/381 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+N +I G + A + M+ + +F L C + EG VHC V
Sbjct: 80 YNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVI 139
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
LGF + VR+ L+ YA + A ++FDE +++ + + S+ E
Sbjct: 140 SLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFE 199
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS-LNLHNALLDMY 180
++ M V N +T ++ CS + G+++H + K S + + N L+D Y
Sbjct: 200 VYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYY 259
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
CG L + F+ + +DV SW S+V + C D + ++L
Sbjct: 260 SACGDLSGSMRSFNAVPEKDVISWNSIV---SVCAD------------------YGSVL- 297
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
+SL LF +M G P +S L+ C + S + G IH +V++ G
Sbjct: 298 ---------DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIH-CYVLKMGFD 347
Query: 301 -PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
S+ + +A++DMY KC IE +A ++ ++ NL NS++ G K + +F
Sbjct: 348 VSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGL 407
Query: 360 MRCMGFKPDDITFVNLLTACS 380
M G D++T +L A S
Sbjct: 408 MIDEGTGIDEVTLSTVLKALS 428
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 126/281 (44%), Gaps = 33/281 (11%)
Query: 173 HNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV 232
HN +D +K G+L++A E FD M RD V
Sbjct: 49 HNRRIDELIKSGNLLSAHEAFDEMSVRD-------------------------------V 77
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
V+++ +++G S+ +++L+ EM+ G+ SVLS C G +H
Sbjct: 78 VTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCR 137
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQ 352
VI G ++ + +A++ +YA ++ A ++F+ + +RNL N ++ + G++K+
Sbjct: 138 -VISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKR 196
Query: 353 AVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
V+ +M G + +T+ ++ CSH L+ EG++ + ++ + ++
Sbjct: 197 LFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLV 256
Query: 413 DLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNV 453
D G L + ++P + +W ++++ C +G+V
Sbjct: 257 DYYSACGDLSGSMRSFNAVPEKDV-ISWNSIVSVCADYGSV 296
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 248/522 (47%), Gaps = 40/522 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
WNTMI G F M R E+ F F++ A ++ GE +H
Sbjct: 104 WNTMISGLVSCGFHEYGIRVFFDM--QRWEIRPTEFTFSILA-SLVTCVRHGEQIHGNAI 160
Query: 62 KLGFDS-ELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAM 120
G L+V N ++ Y G +A VF +DVV+W + + E+A+
Sbjct: 161 CSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVAL 220
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
+ F LM +++P+E T+ V+S CS + ++ G++ K + + A +DM+
Sbjct: 221 DQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMF 280
Query: 181 VKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLA 240
KC L + +LF +E W S++ C ++M+
Sbjct: 281 SKCNRLDDSVKLFRELE-----KWDSVL-----C---------------------NSMIG 309
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH-FVIEKGM 299
YS + +++L+LF M V P++ SVLS+ ++ + L H H VI+ G
Sbjct: 310 SYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS---MNAVMLDHGADVHSLVIKLGF 366
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+A ++++MY K GS++ A VF ++L+ WN++I G A N +A +++ +F+Q
Sbjct: 367 DLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQ 426
Query: 360 MRC-MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRT 418
+ KPD +T + +L AC + G ++EG + F +ME+ +G+ P EHY+C+I+LL R
Sbjct: 427 LLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRV 486
Query: 419 GLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
G++ EA ++ +P +P W +L A G+ LA A +L +P+ S Y++L
Sbjct: 487 GMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLI 546
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEF 520
I +W + ++R M + +K G S + ++ F
Sbjct: 547 KIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 125/238 (52%), Gaps = 3/238 (1%)
Query: 153 MGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYA 212
+ + VH + + + N L +Y K GS++ A +LFD + ++ +W + G
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 213 KCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVS 272
K G L NA D+ P ++VVSW+ M++G + +++F +M + P E S
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-S 140
Query: 273 VLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER 332
+L++ ++C+ G IH + + ++ + N+++DMY + G + A VF + +R
Sbjct: 141 ILASL--VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 333 NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQE 390
++VSWN +I + +G + A++ F MR M +PD+ T +++ CS +S+G++
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVT--LIA 140
G+L +A ++FDE +DVV+W TM G S E + +F M R ++ P E T ++A
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 141 VLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRD 200
L C + G+ G + + + N L + N+++DMY + G A +F ME RD
Sbjct: 144 SLVTCVRHGEQIHGNAICSGVSRYN----LVVWNSVMDMYRRLGVFDYALSVFLTMEDRD 199
Query: 201 VFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
VVSW+ ++ S + + +L F M
Sbjct: 200 -------------------------------VVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 261 AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
+ P+E+ + V+S C L L+ G I+ G + + A +DM++KC ++
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGK-QALALCIKMGFLSNSIVLGAGIDMFSKCNRLD 287
Query: 321 AAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
+ ++F + + + V NSMI Y+ + + A+ +F +PD TF ++L++
Sbjct: 288 DSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 102/238 (42%), Gaps = 42/238 (17%)
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQA 353
++E G + N L +Y K GS+ A ++F+ I ++N ++WN + G NG A
Sbjct: 30 LLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNA 89
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM-- 411
+++FD+M + D +++ +++ G G F+ M+R + I+P +S +
Sbjct: 90 LDLFDEMP----ERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR-WEIRPTEFTFSILAS 144
Query: 412 -------------------------------IDLLGRTGLLKEAYELITSMPMQPCEAAW 440
+D+ R G+ A + +M + +W
Sbjct: 145 LVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV-VSW 203
Query: 441 GALLNACRMHGNVELA--RLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL 496
L+ +C GN E+A + + + P++ + ++ +IC++ R+ K+ +L
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVS-MVVSICSDLRELSKGKQALAL 260
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 187/380 (49%), Gaps = 36/380 (9%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W +I + + A F+ ML H + + LKAC E G VH +V
Sbjct: 252 WTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVV 311
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K +++ V L+ YA G + R+VFD S ++ VTWT++ +A E A+
Sbjct: 312 KRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAIS 371
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
LF +M R + N +T++++L AC +G + +G+ +H + K ++ ++ + + L+ +Y
Sbjct: 372 LFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYC 431
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
KCG E+RD F+ L Q P ++VVSW+AM++G
Sbjct: 432 KCG------------ESRDAFN-------------------VLQQLPSRDVVSWTAMISG 460
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHP 301
S E+L EM+ GV P S L AC L +G IH I K H
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS---IAKKNHA 517
Query: 302 --SVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+V + +A++ MYAKCG + A VF+++ E+NLVSW +MI GYA NG ++A+ + +
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYR 577
Query: 360 MRCMGFKPDDITFVNLLTAC 379
M GF+ DD F +L+ C
Sbjct: 578 MEAEGFEVDDYIFATILSTC 597
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 220/445 (49%), Gaps = 38/445 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEM-DCRSFVFALKACEELSGDFE-GESVHCV 59
W MI GY K + AF+ F ++H + + R FV L C +FE G VH
Sbjct: 151 WTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR-RAEFELGRQVHGN 209
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELA 119
+ K+G + L+V + L++FYA G L A FD KDV++WT + + + A
Sbjct: 210 MVKVGVGN-LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKA 268
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ +F ML PNE T+ ++L ACS+ + GR+VH
Sbjct: 269 IGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVH--------------------- 307
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAML 239
SLV RM DVF TS+++ YAKCG++ + R+ D ++N V+W++++
Sbjct: 308 -----SLVV-----KRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSII 357
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGM 299
A +++ +E++ LF M ++ +VS+L ACG + L LG +H +I+ +
Sbjct: 358 AAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ-IIKNSI 416
Query: 300 HPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQ 359
+V + + ++ +Y KCG A V + R++VSW +MI+G ++ G +A++ +
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 360 MRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
M G +P+ T+ + L AC++ + G+ ++N+ + S +I + + G
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCG 535
Query: 420 LLKEAYELITSMPMQPCEAAWGALL 444
+ EA+ + SMP + +W A++
Sbjct: 536 FVSEAFRVFDSMPEKNL-VSWKAMI 559
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 198/398 (49%), Gaps = 36/398 (9%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNC 115
+H + K D + N LI G L +AR+VFD K+ VTWT M DGY
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 116 SELAMELFNLMLRGDVE-PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
+ A LF ++ + NE + +L+ CS+ + E+GR+VH NM K
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVK----------- 212
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVS 234
V G+L+ +S+V YA+CG+L +A R D K+V+S
Sbjct: 213 ------VGVGNLIVE---------------SSLVYFYAQCGELTSALRAFDMMEEKDVIS 251
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
W+A+++ S+ +++ +F M+ +P E + S+L AC + L G +H V
Sbjct: 252 WTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS-LV 310
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAV 354
+++ + V + +++DMYAKCG I +VF+ +S RN V+W S+IA +A G ++A+
Sbjct: 311 VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAI 370
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
++F M+ +++T V++L AC G + G+E + +N I+ S ++ L
Sbjct: 371 SLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWL 429
Query: 415 LGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGN 452
+ G ++A+ ++ +P + +W A+++ C G+
Sbjct: 430 YCKCGESRDAFNVLQQLPSRDV-VSWTAMISGCSSLGH 466
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W ++I + + A S F M R + + + V L+AC + G+ +H +
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K + + + + L+ Y G + A V + +DVV+WT M G +S A++
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
M++ VEPN T + L AC+ + +GR +H ++ KKN S
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIH-SIAKKNHALS------------ 519
Query: 182 KCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAG 241
+VF +++++ YAKCG + A R D P KN+VSW AM+ G
Sbjct: 520 ------------------NVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMG 561
Query: 242 YSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQL 280
Y++N +E+LKL + M G +++ ++LS CG +
Sbjct: 562 YARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
W MI G + + A + M++ VE + ++ ALKAC G S+H + +
Sbjct: 454 WTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAK 513
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
K S + V + LIH YA G++ A VFD K++V+W M GYA A++
Sbjct: 514 KNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALK 573
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHEN 160
L M E ++ +LS C GDIE+ V +
Sbjct: 574 LMYRMEAEGFEVDDYIFATILSTC---GDIELDEAVESS 609
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 33/376 (8%)
Query: 53 GESVHC-VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYA 111
G+ VH V++ + + V +GLI Y G + R VF S ++ ++WT + GYA
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 112 SRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLN 171
+ + A+ M + P+ VT+ VL C+++ I+ G+ +H C
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIH---------CY-- 443
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKN 231
AL ++++ SLV TS++ Y+KCG E R D+ +N
Sbjct: 444 ---ALKNLFLPNVSLV-----------------TSLMVMYSKCGVPEYPIRLFDRLEQRN 483
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
V +W+AM+ Y +N + +++F M+ + P+ + VL+ C L L LG +H
Sbjct: 484 VKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHG 543
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAK 351
H +++K ++ I+ MY KCG + +A F+A++ + ++W ++I Y N +
Sbjct: 544 H-ILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFR 602
Query: 352 QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCM 411
A+N F+QM GF P+ TF +L+ CS G + E +F M R Y ++P EHYS +
Sbjct: 603 DAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLV 662
Query: 412 IDLLGRTGLLKEAYEL 427
I+LL R G ++EA L
Sbjct: 663 IELLNRCGRVEEAQRL 678
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 225/508 (44%), Gaps = 43/508 (8%)
Query: 6 IRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGF 65
I+ + + N +A + + + + ++ +F L+AC G+ VH +R G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 66 DSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDG--YASRNCSELAMELF 123
+S +R L+H Y G +K A++VFDES+ +V +W + G + + + + F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC 183
M V+ N +L V + + + G + H K + S+ L +L+DMY KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 184 GSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYS 243
G + AR +FD + RD+ W AM+AG +
Sbjct: 263 GKVGLARRVFDEIVERDIVVW-------------------------------GAMIAGLA 291
Query: 244 QNNKPKESLKLFHEMMG-AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
N + E+L LF M+ + P L ++L G + L LG +H H + K
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
+ + ++D+Y KCG + + VF +RN +SW ++++GYAANG+ QA+ M+
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ 411
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
GF+PD +T +L C+ I +G+E +N + P + ++ + + G+ +
Sbjct: 412 EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL-PNVSLVTSLMVMYSKCGVPE 470
Query: 423 EAYELITSMPMQPCEAAWGALLNA----CRMHGNVELARLSACNLLSLDPEDSGIYVLLA 478
L + + + AW A+++ C + +E+ RL LLS DS +
Sbjct: 471 YPIRLFDRLEQRNVK-AWTAMIDCYVENCDLRAGIEVFRLM---LLSKHRPDSVTMGRVL 526
Query: 479 NICANERKWGDVKRVRSLMRDKGVKKIP 506
+C++ + K + + K + IP
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIP 554
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 118/217 (54%), Gaps = 1/217 (0%)
Query: 257 EMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC 316
E++ G +P+ V + +C L L +H HF+ K L N ++ M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSK-FRGDPKLNNMVISMFGEC 284
Query: 317 GSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
SI A VF+ + ++++ SW+ M+ Y+ NG A+++F++M G KP++ TF+ +
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPC 436
AC+ G I E +F +M+ +GI PK EHY ++ +LG+ G L EA + I +P +P
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 437 EAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGI 473
W A+ N R+HG+++L ++ +DP + I
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVI 441
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 32/209 (15%)
Query: 133 PNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAREL 192
P+ + + +C+ + +E ++VH++ + R L+N ++ M+ +C S+ A+ +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 193 FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESL 252
FD M +D+ S W M+ YS N ++L
Sbjct: 294 FDHMVDKDMDS-------------------------------WHLMMCAYSDNGMGDDAL 322
Query: 253 KLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDM 312
LF EM G+ P E ++V AC + + E G+ P +L +
Sbjct: 323 HLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGV 382
Query: 313 YAKCGS-IEAAAEVFNAISERNLVSWNSM 340
KCG +EA + + E W +M
Sbjct: 383 LGKCGHLVEAEQYIRDLPFEPTADFWEAM 411
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Query: 33 DCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVF 92
D FV ++C L + VH + F + + N +I + + + A+ VF
Sbjct: 235 DRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVF 294
Query: 93 DESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIE 152
D KD+ +W M Y+ + A+ LF M + ++PNE T + V AC+ +G IE
Sbjct: 295 DHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
Query: 153 MGRRVHENMEKKNMRCSLNLHN-ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGY 211
++M+ ++ H +L + KCG LV A + + + + Y
Sbjct: 355 EAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNY 414
Query: 212 AKC-GDLE 218
A+ GD++
Sbjct: 415 ARLHGDID 422
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 214/472 (45%), Gaps = 56/472 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NT+I GY KA NP +F RM +E +F LK + + E+V ++
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAME 121
LGF + D T++ +FDGY+S +E A+
Sbjct: 312 DLGF-------------------------------VPDAFTFSILFDGYSSNEKAEAALG 340
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
++ + V+ N T +L+A + G IE + K + + ++N ++D Y
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 182 KCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV---- 233
+ G LV AR + ME + D ++ ++ + + G++ENA + +++ K V
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
+++ ++ GY + + + + EM G +P +V+S ++CL G + +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMP------NVVSYGTLINCLCKGSKLLEAQ 514
Query: 294 VI-----EKGMHPSVTLANAILDMYAKCGSIEAA----AEVFNAISERNLVSWNSMIAGY 344
++ ++G+ P V + N ++D G IE A E+ E NLV++N++I G
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK 404
+ G+ +A ++ ++ G KPD T+ +L++ G + + M+R+ GIKP
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS-GIKPT 633
Query: 405 REHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELA 456
+ Y +I L + G ++ L M ++P + +L+ +HG++E A
Sbjct: 634 LKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 177/423 (41%), Gaps = 28/423 (6%)
Query: 102 TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM 161
+ T + D + + +F +L D P++ + A ++ D+ G + M
Sbjct: 146 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 205
Query: 162 EKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDL 217
+ + S+ ++N L+D K + A +LFD M R + ++ ++++GY K G+
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 218 ENARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSV 273
E + + ++ ++++++ +L G + +++ + EM G VP+ +
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
Query: 274 LSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERN 333
+++ ++ G+ + + +L+ K G IE A E+ +
Sbjct: 326 FDGYSSNEKAEAALGVYET-AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384
Query: 334 LVS----WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQ 389
LV +N+MI GY G A + M G KPD + + L+ G + +
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP---MQPCEAAWGALLNA 446
+ M+ G+ P E Y+ +I GR + ++++ M P ++G L+N
Sbjct: 445 KEVNKMKLK-GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN- 502
Query: 447 CRMHGNVELARLSACNLLSLDPEDSG------IYVLLANICANERKWGDVKRVRSLMRDK 500
C G ++L ++ D ED G IY +L + C ++ K D R M K
Sbjct: 503 CLCKG----SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558
Query: 501 GVK 503
G++
Sbjct: 559 GIE 561
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 156/372 (41%), Gaps = 17/372 (4%)
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE 159
V + + DG A +LF+ ML + P+ +T ++ + G+ E +V E
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 160 NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCG 215
M+ ++ SL N LL K G + A + M+ D F+++ + +GY+
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 216 DLENA----RRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
E A +D N + S +L + K +++ ++ M G+VP E
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE 331
+++ + L +G + + ++GM P N ++ + + G +E A + N +
Sbjct: 394 TMIDGYCRKGDL-VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 332 RNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
+ + ++N +I GY + + ++ +M G P+ +++ L+ G + E
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE---AAWGALL 444
Q ME + G+ PK Y+ +ID G +++A+ M + E + L+
Sbjct: 513 AQIVKRDME-DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 445 NACRMHGNVELA 456
+ M G + A
Sbjct: 572 DGLSMTGKLSEA 583
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 12/297 (4%)
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
+ ++ K K++L + V + L+ + CG+ L +H H
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVS-H 286
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
++ + +L+MY+ CG AA VF +SE+NL +W +I +A NG + A+++F +
Sbjct: 287 LDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRF 346
Query: 361 RCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGL 420
+ G PD F + AC G + EG +F +M R+YGI P E Y ++++ G
Sbjct: 347 KEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 421 LKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANI 480
L EA E + MPM+P W L+N R+HGN+EL A + LDP
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR---------- 456
Query: 481 CANERKWGDVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVL 537
+ + G + S + + +KK G L V +EF D + P+++E++++L
Sbjct: 457 LNKQSREGFIPVKASDVEKESLKKRSG-ILHGVKSSMQEFRAGDTNLPENDELFQLL 512
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 42 KACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVV 101
K C E G E ++VH + +L + L+ Y++ G A VF++ S K++
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 102 TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM 161
TW + +A E A+++F+ P+ + AC +GD++ G E+M
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 162 EKK-NMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR-DVFSWTSMVNGYAKCGDLE- 218
+ + S+ + +L++MY G L A E +RM +V W +++N G+LE
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 219 -----NARRFLDQT 227
FLD T
Sbjct: 442 GDYCAEVVEFLDPT 455
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM 259
D+ S ++ Y+ CG A ++ KN+ +W ++ +++N ++++ +F
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 260 GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI 319
G +P+ + ACG L ++ G + + G+ PS+ ++++MYA G +
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 320 EAAAEVFNAIS-ERNLVSWNSMI 341
+ A E + E N+ W +++
Sbjct: 408 DEALEFVERMPMEPNVDVWETLM 430
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 194/427 (45%), Gaps = 55/427 (12%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG++ + + + L++ + G + A + D D+VT +T+ +G +
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ L + M+ +P+EVT VL+ + G+ + + ME++N++ S+ ++ ++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHKN-- 231
D K GS A LF+ ME + DV +++S++ G G ++ + L + +N
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 232 --VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
VV++SA++ + + K E+ +L++EM+ G+ P+ S++ + +CL H
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL---HEA 369
Query: 290 HQHF--VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAG 343
+Q F ++ KG P + + +++ Y K ++ +F IS + N +++N+++ G
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 344 YAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMER------ 397
+ +G+ A +F +M G P +T+ LL G +++ E F M++
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 398 ----------------------------NYGIKPKREHYSCMIDLLGRTGLLKEAYELIT 429
+ G+KP Y+ MI L + G L EA L
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 430 SMPMQPC 436
M C
Sbjct: 550 KMKEDGC 556
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 161/345 (46%), Gaps = 16/345 (4%)
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE 159
VV ++ + D + A+ LFN M ++ + VT +++ G + G ++
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 160 NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCG 215
M +N+ + +AL+D++VK G L+ A+EL++ M TR D ++ S+++G+ K
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 216 DLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
L A + D K ++V++S ++ Y + + + ++LF E+ G++P
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE 331
+++ Q LN + Q V +G+ PSV +LD G + A E+F + +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMV-SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 332 RNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
+ +N +I G + A ++F + G KPD +T+ ++ G +SE
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDL-LGRTGLLKEAYELITSM 431
F M+ + G P Y+ +I LG +GL+ + ELI M
Sbjct: 544 ADMLFRKMKED-GCTPDDFTYNILIRAHLGGSGLI-SSVELIEEM 586
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 147/345 (42%), Gaps = 21/345 (6%)
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A++LF M++ P + + SA ++ ++ + ME + + +++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 179 MYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENA----RRFLDQTPHK 230
Y + L+ A + R D +++++VNG+ G + A R ++
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQL--SCLNLGHW 288
++V+ S ++ G + E+L L M+ G P+E VL+ + S L L +
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGY 344
E+ + SV + ++D K GS + A +FN + + ++V+++S+I G
Sbjct: 234 RKME---ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK 404
+G+ + +M PD +TF L+ G + E +E + M GI P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM-ITRGIAPD 349
Query: 405 REHYSCMIDLLGRTGLLKEAYELITSMPMQPCE---AAWGALLNA 446
Y+ +ID + L EA ++ M + CE + L+N+
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 188/389 (48%), Gaps = 21/389 (5%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFD---ESSLK-DVVTWTTMFDGYASRNCSE 117
KLGF+ +++ LI+ + ++ A + + E +K DVV +TT+ D
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ LF+ M + P+ V ++++ G + M K+ ++ + NAL+
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 178 DMYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARR--FLDQTP--H 229
D +VK G + A EL++ M ++F++TS++NG+ G ++ AR+ +L +T
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
+VV++++++ G+ + K +++K+F+EM G+ +++ GQ+ N+ +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-------NLVSWNSMIA 342
H V +G+ P++ N +L G ++ A +F + +R N+ ++N ++
Sbjct: 375 FSHMV-SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 343 GYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIK 402
G NG+ ++A+ VF+ MR IT+ ++ G + F ++ G+K
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GVK 492
Query: 403 PKREHYSCMIDLLGRTGLLKEAYELITSM 431
P Y+ MI L R GL EA+ L M
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 157/347 (45%), Gaps = 15/347 (4%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
D+ T + + + + LA M++ EP+ VT ++++ +E +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET----RDVFSWTSMVNGYAKC 214
M + ++ + ++ ++D K G + A LFD+ME DV +TS+VNG
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
G +A L + +V++++A++ + + K ++ +L++EM+ + P
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
S+++ C++ + + + KG P V ++++ + KC ++ A ++F +S
Sbjct: 286 TSLINGFCMEGCVDEARQMF-YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 331 ER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
++ N +++ ++I G+ G+ A VF M G P+ T+ LL + G +
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 387 EGQEYFYTMERNY--GIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
+ F M++ G+ P Y+ ++ L G L++A + M
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 199/407 (48%), Gaps = 22/407 (5%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG++ +++ + L++ Y + A + D+ D T+TT+ G N +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ L + M++ +P+ VT V++ + GDI++ + + MEK + + ++N ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFL----DQTPH 229
D K + A LF M+ + DVF+++S+++ G +A R L ++ +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
NVV++SA++ + + K E+ KL+ EM+ + P+ S+++ L+ +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
+ +I K P+V + ++ + K +E E+F +S+R N V++ ++I G+
Sbjct: 386 FE-LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
A VF QM +G P+ +T+ LL G +++ F ++R+ ++P
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDI 503
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQ---PCEAAWGALLNA-CR 448
Y+ MI+ + + G +++ +EL ++ ++ P A+ +++ CR
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 158/345 (45%), Gaps = 14/345 (4%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
DVV + T+ DG + A+ LF M + P+ T +++S G R+
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+M ++ + ++ +AL+D +VK G LV A +L+D M R D+F+++S++NG+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
L+ A+ + K NVV++S ++ G+ + + +E ++LF EM G+V
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
+++ Q + + + V G+HP++ N +LD K G + A VF +
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 331 ----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
E ++ ++N MI G G+ + +F + G P+ I + +++ G
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
E M+ + G P Y+ +I R G + + ELI M
Sbjct: 556 EADSLLKKMKED-GPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 175/419 (41%), Gaps = 60/419 (14%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
D+ T++ + + R+ LA+ + M++ EP+ VTL ++L+ I +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+ M + + L+ A L D+M R D+ ++ ++VNG K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 215 GDLENARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
GD++ A L + +VV ++ ++ G + ++L LF EM G+ P+
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD---- 292
Query: 271 VSVLSACGQLSCL-NLGHWIHQHFV----IEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
V + +SCL N G W + IE+ ++P+V +A++D + K G + A ++
Sbjct: 293 --VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 326 FNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
++ + +R ++ +++S+I G+ + + +A ++F+ M P+ +T+ L+
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 382 GGLISEGQEYFYTMER----------------------------------NYGIKPKREH 407
+ EG E F M + + G+ P
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 408 YSCMIDLLGRTGLLKEA---YELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNL 463
Y+ ++D L + G L +A +E + M+P + ++ G VE CNL
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 147/355 (41%), Gaps = 54/355 (15%)
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A++LF M++ P+ V +LSA ++M E+ + E M+ + L ++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 179 MYVKCGSLVAARELFDRMET----RDVFSWTSMVNGYAKCGDLENARRFLDQTPH----K 230
+ + L A + +M D+ + +S++NGY + +A +DQ
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
+ +++ ++ G +NK E++ L +M
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQM-------------------------------- 214
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS----ERNLVSWNSMIAGYAA 346
+++G P + +++ K G I+ A + + E ++V +N++I G
Sbjct: 215 ----VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM-ERNYGIKPKR 405
A+N+F +M G +PD T+ +L++ + G S+ M ER I P
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK--INPNV 328
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSM---PMQPCEAAWGALLNACRMHGNVELAR 457
+S +ID + G L EA +L M + P + +L+N MH ++ A+
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 3/210 (1%)
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
K K+++++ G V + L + CG L +H+ G+ ++
Sbjct: 161 KVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGI-SDISAY 219
Query: 307 NAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFK 366
N+I++MY+ CGS+E A VFN++ ERNL +W +I +A NGQ + A++ F + + G K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 367 PDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYE 426
PD F + AC G ++EG +F +M + YGI P EHY ++ +L G L EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 427 LITSMPMQPCEAAWGALLNACRMHGNVELA 456
+ S M+P W L+N R+HG++ L
Sbjct: 340 FVES--MEPNVDLWETLMNLSRVHGDLILG 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMM 259
D+ ++ S++ Y+ CG +E+A + P +N+ +W ++ +++N + ++++ F
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 260 GAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSI 319
G P+ + ACG L +N G + E G+ P + +++ M A+ G +
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYL 334
Query: 320 EAAAEVFNAISERNLVSWNSMI 341
+ A ++ E N+ W +++
Sbjct: 335 DEALRFVESM-EPNVDLWETLM 355
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 161/345 (46%), Gaps = 14/345 (4%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
DVV +TT+ D + A+ LF M + PN VT +++ G R+
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+M ++ + ++ +AL+D +VK G LV A +L+D M R D+F+++S++NG+
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
L+ A+ + K NVV+++ ++ G+ + + +E ++LF EM G+V
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
+++ Q ++ I + V G+ P + + +LD K G +E A VF +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMV-SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 331 ----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
E ++ ++N MI G G+ + ++F + G KP+ I + +++ GL
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
E F M+ + G P Y+ +I R G + ELI M
Sbjct: 553 EADALFREMKED-GTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 205/449 (45%), Gaps = 18/449 (4%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+N ++ K ++ S RM R+ D S+ + S +V +
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL----KDVVTWTTMFDGYASRNCSE 117
KLG++ +++ + L++ Y + A + D+ + + VT+ T+ G N +
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ L + M+ +P+ T V++ + GDI++ + + MEK + + ++ ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFL----DQTPH 229
D ++ A LF M+ + +V ++ S++ G +A R L ++ +
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
NVV++SA++ + + K E+ KL+ EM+ + P+ S+++ L+ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
+ +I K P+V N ++ + K +E E+F +S+R N V++N++I G
Sbjct: 383 FE-LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
G A +F +M G PD IT+ LL G + + F ++++ ++P
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDI 500
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
Y+ MI+ + + G +++ ++L S+ ++
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 160/361 (44%), Gaps = 27/361 (7%)
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL--HNAL 176
A++LF M++ P+ V +LSA ++M ++ + E M+ N+R S +L +N L
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ--NLRISYDLYSYNIL 121
Query: 177 LDMYVKCGSLVAARELFDRMET----RDVFSWTSMVNGYAKCGDLENARRFLDQT----P 228
++ + + L A + +M D+ + +S++NGY + A +DQ
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
N V+++ ++ G +NK E++ L M+ G P+ +V++ + ++L
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 289 IHQHFVIEKG-MHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAG 343
+ + +EKG + V + I+D ++ A +F + + N+V++NS+I
Sbjct: 242 LLKK--MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 344 YAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKP 403
G+ A + M P+ +TF L+ A G + E ++ + M + I P
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDP 358
Query: 404 KREHYSCMIDLLGRTGLLKEA---YELITSMPMQPCEAAWGALL----NACRMHGNVELA 456
YS +I+ L EA +EL+ S P + L+ A R+ +EL
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 457 R 457
R
Sbjct: 419 R 419
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 136/328 (41%), Gaps = 52/328 (15%)
Query: 73 NGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR 128
+ LI + G L A +++DE S D+ T++++ +G+ + + A +F LM+
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVA 188
D PN VT ++ + +E G + M ++ + + +N L+ + G
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 189 ARELFDRMET----RDVFSWTSMVNGYAKCGDLENAR---RFLDQTP-HKNVVSWSAMLA 240
A+++F +M + D+ +++ +++G K G LE A +L ++ ++ +++ M+
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMH 300
G M AG V + L LS KG+
Sbjct: 509 G----------------MCKAGKVEDGWDLFCSLSL--------------------KGVK 532
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISE----RNLVSWNSMIAGYAANGQAKQAVNV 356
P+V + ++ + + G E A +F + E N ++N++I +G + +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 357 FDQMRCMGFKPDDITFVNLLTACSHGGL 384
+MR GF D T ++ G L
Sbjct: 593 IKEMRSCGFVGDASTISMVINMLHDGRL 620
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 169/363 (46%), Gaps = 18/363 (4%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLGF+ +L+ L++ Y ++ A +FD+ +VVT+TT+
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ELFN M PN VT A+++ ++G + +M K+ + ++ AL+
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFL----DQTPH 229
D +VK G L+ A+EL++ M DVF++ S++NG G L+ AR+ +
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
N V ++ ++ G+ ++ + ++ +K+F+EM GVV ++ + ++ +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
+ P + N +LD G +E A +F + +R N+V++ +I G
Sbjct: 386 FNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
G+ + A ++F + G KP+ IT+ +++ GLI E F M+ + G P
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED-GFLPNE 503
Query: 406 EHY 408
Y
Sbjct: 504 SVY 506
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 128/270 (47%), Gaps = 23/270 (8%)
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL----NLG 286
++V+++++L GY N+ ++++ LF +++G G P +V++ + CL +L
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP------NVVTYTTLIRCLCKNRHLN 205
Query: 287 HWIHQHFVI-EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMI 341
H + + G P+V NA++ + G AA + + +R N++++ ++I
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 342 AGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGI 401
+ G+ +A +++ M M PD T+ +L+ GL+ E ++ FY MERN G
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN-GC 324
Query: 402 KPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEA---AWGALLNACRMHGNVELARL 458
P Y+ +I ++ +++ ++ M + A + L+ + G ++A+
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ- 383
Query: 459 SACNLLS--LDPEDSGIY-VLLANICANER 485
N +S P D Y VLL +C N +
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 46/267 (17%)
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF 293
S+ +L N + ++L LF M+ + +P +LS +++ ++ + +
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAA------AEVFNAISERNLVSWNSMIAGYAAN 347
I G+ P + N + M+ C S + ++ E +LV++ S++ GY
Sbjct: 110 QI-LGIPPLLCTCNIV--MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERN--------- 398
+ + A+ +FDQ+ MGFKP+ +T+ L+ ++ E F M N
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 399 ------------YG-------------IKPKREHYSCMIDLLGRTGLL---KEAYELITS 430
+G I+P ++ +ID + G L KE Y ++
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 431 MPMQPCEAAWGALLNACRMHGNVELAR 457
M + P +G+L+N M+G ++ AR
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEAR 313
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 193/406 (47%), Gaps = 28/406 (6%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG++ +++ + L++ Y + A + D+ D T+TT+ G N +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ L + M++ +P+ VT V++ + GDI++ + ME ++ ++ + N ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK--- 230
D K + A +LF MET+ +V ++ S++N G +A R L K
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 231 -NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
NVV+++A++ + + K E+ KL EM+ + P+ +++ + L+ +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
+ F++ K P++ N +++ + KC +E E+F +S+R N V++ ++I G+
Sbjct: 386 FK-FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA-CSHGGLISEGQEYFYT----MERNYG 400
G A VF QM D +T+ LL CS+G L + + Y ME N
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIF 504
Query: 401 IKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNA 446
I Y+ MI+ + + G + EA++L S+ ++P + +++
Sbjct: 505 I------YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 151/328 (46%), Gaps = 21/328 (6%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
+VV + T+ D E+A++LF M + PN VT ++++ G R+
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
NM +K + ++ NAL+D + K G LV A +L + M R D ++ ++NG+
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
L+ A++ K N+ +++ ++ G+ + + ++ ++LF EM G+V
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKC--GSIEAAAEVFNA 328
+++ Q + + + V + P+ + +IL ++ C G ++ A +F
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNR--VPTDIMTYSIL-LHGLCSYGKLDTALVIFKY 493
Query: 329 IS----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
+ E N+ +N+MI G G+ +A ++F + KPD +T+ +++ L
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMI 412
+ E + F M+ + G P Y+ +I
Sbjct: 551 LQEADDLFRKMKED-GTLPNSGTYNTLI 577
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 157/325 (48%), Gaps = 14/325 (4%)
Query: 67 SELLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRNCSELAMEL 122
+ +++ N +I ++ A ++F E K +VVT+ ++ + + A L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 123 FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVK 182
+ ML + PN VT A++ A + G + ++HE M ++++ +N L++ +
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 183 CGSLVAARELFDRMETRD----VFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVS 234
L A+++F M ++D + ++ +++NG+ KC +E+ + + N V+
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
++ ++ G+ Q + +F +M+ V + +L L+ I + ++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK-YL 494
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-NLVSWNSMIAGYAANGQAKQA 353
+ M ++ + N +++ K G + A ++F ++S + ++V++N+MI+G + ++A
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 354 VNVFDQMRCMGFKPDDITFVNLLTA 378
++F +M+ G P+ T+ L+ A
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 156/358 (43%), Gaps = 21/358 (5%)
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A++LF M++ P+ V +LSA ++M E+ + E M+ + L ++ ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 179 MYVKCGSLVAARELFDRMET----RDVFSWTSMVNGYAKCGDLENARRFLDQTPH----K 230
+ + L A + +M D+ + +S++NGY + +A +DQ
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
+ +++ ++ G +NK E++ L +M+ G P+ +V++ + ++L +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAA 346
+ + +V + N I+D K +E A ++F + + N+V++NS+I
Sbjct: 247 NKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE 406
G+ A + M P+ +TF L+ A G + E ++ M + I P
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR-SIDPDTI 364
Query: 407 HYSCMID---LLGRTGLLKEAYELITSMPMQPCEAAWGALLNA-C---RMHGNVELAR 457
Y+ +I+ + R K+ ++ + S P + L+N C R+ VEL R
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 157/349 (44%), Gaps = 46/349 (13%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA---CSQMGD----- 150
D+ T++ + + R+ LA+ + M++ EP+ VTL ++L+ ++ D
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 151 ---IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFS 203
+EMG + + + L LHN K VA L D+M R D+ +
Sbjct: 177 DQMVEMGYK-PDTFTFTTLIHGLFLHN-------KASEAVA---LVDQMVQRGCQPDLVT 225
Query: 204 WTSMVNGYAKCGDLENARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMM 259
+ ++VNG K GD++ A L++ NVV ++ ++ + + ++ LF EM
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 260 GAGVVPEEHALVSVLSACGQLSCL-NLGHWIHQHFV----IEKGMHPSVTLANAILDMYA 314
G+ P +V++ ++CL N G W + +EK ++P+V NA++D +
Sbjct: 286 TKGIRP------NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 315 KCGSIEAAAEVFNAISERNL----VSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
K G + A ++ + +R++ +++N +I G+ + + +A +F M P+
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
T+ L+ + +G E F M + G+ Y+ +I + G
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQR-GLVGNTVTYTTIIQGFFQAG 447
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 195/447 (43%), Gaps = 73/447 (16%)
Query: 20 SYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFY 79
+Y +R L +R E D + E + +G+ ++ LG R G +
Sbjct: 200 TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLG-------RYGKVTI- 251
Query: 80 ADRGWLKHAREVFDESSL----KDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNE 135
A+ +F+ + V ++ + Y E A+ +FN M + PN
Sbjct: 252 --------AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNL 303
Query: 136 VTLIAVLSACSQMG-DIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFD 194
VT AV+ AC + G + + + + M++ ++ N+LL + + G AAR LFD
Sbjct: 304 VTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 195 RMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVSWSAMLAGYSQNN 246
M R DVFS+ ++++ K G ++ A L Q P K NVVS+S ++ G+++
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
+ E+L LF EM G+ A ++S
Sbjct: 424 RFDEALNLFGEMRYLGI------------ALDRVSY------------------------ 447
Query: 307 NAILDMYAKCGSIEAAAEVFNAIS----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
N +L +Y K G E A ++ ++ ++++V++N+++ GY G+ + VF +M+
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
P+ +T+ L+ S GGL E E F ++ G++ YS +ID L + GL+
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-KSAGLRADVVLYSALIDALCKNGLVG 566
Query: 423 EAYELITSMP---MQPCEAAWGALLNA 446
A LI M + P + ++++A
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 174/402 (43%), Gaps = 64/402 (15%)
Query: 64 GFDSELLVRNGLIHFYADRGWLKHAREVFD---ESSLK-DVVTWTTMFDGYASRNCSELA 119
G+ + + + LI Y G + A VF+ E L+ ++VT+ + D C +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-----CGKGG 317
Query: 120 MEL------FNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLH 173
ME F+ M R V+P+ +T ++L+ CS+ G E R + + M + + + +
Sbjct: 318 MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY 377
Query: 174 NALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPH 229
N LLD K G + A E+ +M + +V S++++++G+AK G + A + +
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 230 KNV----VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL 285
+ VS++ +L+ Y++ + +E+L + EM G+ +
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD------------------- 478
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMI 341
V NA+L Y K G + +VF + NL++++++I
Sbjct: 479 -----------------VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 342 AGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGI 401
GY+ G K+A+ +F + + G + D + + L+ A GL+ M + GI
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GI 580
Query: 402 KPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGAL 443
P Y+ +ID GR+ + + + + +A AL
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 184/422 (43%), Gaps = 49/422 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV-- 59
++ +I Y ++ A S F M + + + ++ + AC + G E + V
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK--GGMEFKQVAKFFD 328
Query: 60 -VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRN 114
+++ G + + N L+ + G + AR +FDE + + DV ++ T+ D
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
+LA E+ M + PN V+ V+ ++ G + + M + +N
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 175 ALLDMYVKCGSLVAARELFDRMET----RDVFSWTSMVNGYAKCGDLENARRFLDQTPHK 230
LL +Y K G A ++ M + +DV ++ +++ GY K G + ++ + +
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 231 ----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLN-- 284
N++++S ++ GYS+ KE++++F E AG+ A V + SA C N
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL----RADVVLYSALIDALCKNGL 564
Query: 285 LGHWIHQ-HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN---------AISERNL 334
+G + + ++G+ P+V N+I+D + + +++ +A+ N A+S
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTE 624
Query: 335 VSWNSMIAGYA-----ANGQAKQ-----------AVNVFDQMRCMGFKPDDITFVNLLTA 378
N +I + +N + + + VF +M + KP+ +TF +L A
Sbjct: 625 TEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Query: 379 CS 380
CS
Sbjct: 685 CS 686
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 305 LANAILDMYAKCGSIEAAAEVFNAISE----RNLVSWNSMIAGYAANGQAKQAVNVFDQM 360
LA+A++ + G + A +F + +++++I+ Y +G ++A++VF+ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 361 RCMGFKPDDITFVNLLTACSHGGL-ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG 419
+ G +P+ +T+ ++ AC GG+ + ++F M+RN G++P R ++ ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRGG 353
Query: 420 LLKEAYELITSMPMQPCEA---AWGALLNACRMHGNVELA 456
L + A L M + E ++ LL+A G ++LA
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 144/331 (43%), Gaps = 21/331 (6%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NT++ K ++AF +M R+ + S+ + + E ++ +R
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESS----LKDVVTWTTMFDGYASRNCSE 117
LG + + N L+ Y G + A ++ E + KDVVT+ + GY + +
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
++F M R V PN +T ++ S+ G + + + +R + L++AL+
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 178 DMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
D K G + +A L D M + +V ++ S+++ + + ++ R D + ++
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD---RSADYSNGGSLP 613
Query: 234 SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSC-LNLGHWIHQH 292
S+ L+ ++ + ++LF ++ +LSC L + +HQ
Sbjct: 614 FSSSALSALTE-TEGNRVIQLFGQLT---TESNNRTTKDCEEGMQELSCILEVFRKMHQ- 668
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAA 323
+E + P+V +AIL+ ++C S E A+
Sbjct: 669 --LE--IKPNVVTFSAILNACSRCNSFEDAS 695
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 180/389 (46%), Gaps = 31/389 (7%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESS----LKDVVTWTTMFDGYASRNCSE 117
KLGF ++ L++ + + A + D + +VV + T+ +G
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+E+F M + + + VT ++S S G R+ +M K+ + ++ AL+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK--- 230
D +VK G+L+ AR L+ M R +VF++ S++NG+ G L +A+ D K
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 231 -NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
+VV+++ ++ G+ ++ + ++ +KLF EM G+V + +++ Q LN+ +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
V + G+ P + N +LD G IE A + + + +++++N +I G
Sbjct: 382 FNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK- 404
+ K+A +F + G KPD I ++ +++ GL E + M+ + G P
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED-GFMPSE 499
Query: 405 -------REHYSCMIDLLGRTGLLKEAYE 426
R+HY+ + L+K A+E
Sbjct: 500 RIYDETLRDHYTSL-----SAELIKAAHE 523
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 190/413 (46%), Gaps = 33/413 (7%)
Query: 44 CEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKD 99
C +LS F S + KLG++ + ++ N L++ + A E+ D
Sbjct: 136 CRKLSYAF---STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE 159
++T T+ +G A+ L + M+ +PNEVT VL+ + G + +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 160 NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCG 215
ME++N++ ++ ++D K GSL A LF+ ME + D+ ++ +++ G+ G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 216 DLENARRFL-DQTPHK---NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
++ + L D K NVV++S ++ + + K +E+ +L EMM G+ P
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 272 SVLSACGQLSCLNLGHWIHQ-HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
S++ + + L I +I KG P + N +++ Y K I+ E+F +S
Sbjct: 373 SLIDGFCKEN--RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 331 ER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
R N V++N+++ G+ +G+ + A +F +M +PD +++ LL G +
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 387 EGQEYF-----YTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
+ E F ME + GI Y +I + + +A++L S+P++
Sbjct: 491 KALEIFGKIEKSKMELDIGI------YMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/322 (18%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 75 LIHFYADRGWLKHAREVFDESSLKDV----VTWTTMFDGYASRNCSELAMELFNLMLRGD 130
LI + G L+ A ++ E + + +T+ ++ DG+ N E A+++ +LM+
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 131 VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAR 190
+P+ +T +++ + I+ G + M + + + +N L+ + + G L A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 191 ELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVSWSAMLAGY 242
+LF M +R D+ S+ +++G G+LE A + ++ + ++ G
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPS 302
+K ++ LF + GV + A ++S + L+ + + E+G P
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT-EEGHAP- 576
Query: 303 VTLANAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
+ +++N +I + + A A + ++M+
Sbjct: 577 ------------------------------DELTYNILIRAHLGDDDATTAAELIEEMKS 606
Query: 363 MGFKPDDITFVNLLTACSHGGL 384
GF D T ++ S G L
Sbjct: 607 SGFPADVSTVKMVINMLSSGEL 628
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 191/403 (47%), Gaps = 26/403 (6%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
+VVT++T D + +LA++ F+ M R + PN VT ++ + GD+E+ ++
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM-ETR---DVFSWTSMVNGYAKC 214
+ M + M ++ + AL+D + K G + A E++ RM E R + +T++++G+ +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 215 GDLENARRF----LDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
GD +NA +F L+Q ++ ++ +++G N K KE+ ++ +M + +VP+
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
++++A + + ++ H +IE+G P V + ++D AK G + A V+ I
Sbjct: 342 TTMMNAYFKSGRMKAAVNMY-HKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIE 399
Query: 331 ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA-CSHGGLISEGQ 389
+ N V + +I G + +F ++ G PD + + + C G L+ +
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 390 EYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM---PMQPCEAAWGALLNA 446
T G+ Y+ +I L GL+ EA ++ M + P A + L+ A
Sbjct: 460 --LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 447 CRMHGNVELARLSACNLLSLDPEDSGIYVLLANI-----CANE 484
GN ++A + L LD + G+ +++ C NE
Sbjct: 518 YEKEGN-----MAAASDLLLDMQRRGLVTAVSDADCSKQCGNE 555
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 191/408 (46%), Gaps = 44/408 (10%)
Query: 51 FEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK---------DVV 101
F + VH + R G + +++ N LI + G ++ A V + SL+ D+V
Sbjct: 74 FAEDIVHSMPR-FGCEPDVISYNSLIDGHCRNGDIRSASLVLE--SLRASHGFICKPDIV 130
Query: 102 TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM 161
++ ++F+G++ + +ML+ PN VT + + G++++ + +M
Sbjct: 131 SFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSM 189
Query: 162 EKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDL 217
++ + ++ L+D Y K G L A L+ M + +V ++T++++G+ K G++
Sbjct: 190 KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEM 249
Query: 218 ENAR----RFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSV 273
+ A R ++ N + ++ ++ G+ Q ++K +M+ G+ + A +
Sbjct: 250 QRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVI 309
Query: 274 LSA-CGQLSCLNLGHWIHQHFVIE----KGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
+S CG G ++E + P + + +++ Y K G ++AA +++
Sbjct: 310 ISGLCGN------GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 329 ISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA-CSHGG 383
+ ER ++V+ ++MI G A NGQ +A+ F C+ K +D+ + L+ A C G
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF----CIE-KANDVMYTVLIDALCKEGD 418
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
I E ++ G+ P + Y+ I L + G L +A++L T M
Sbjct: 419 FIE--VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 183/389 (47%), Gaps = 18/389 (4%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG++ ++ + L++ Y + A + D+ D +T+TT+ G N +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ L + M++ +PN VT V++ + GD ++ + ME + + + N ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK--- 230
D K + A LF MET+ +V +++S+++ G +A + L K
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 231 -NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
N+V+++A++ + + K E+ KL+ +M+ + P+ S+++ L+ +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----VSWNSMIAGYA 345
+ F++ K P V N ++ + K +E E+F +S R L V++ ++I G
Sbjct: 388 FE-FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
+G A VF QM G PD +T+ LL + G + + E F M+++ IK
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDI 505
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
Y+ MI+ + + G + + ++L S+ ++
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 159/346 (45%), Gaps = 16/346 (4%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
DVV + T+ D + A+ LF M + PN VT +++S G ++
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+M +K + +L NAL+D +VK G V A +L+D M R D+F++ S+VNG+
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
L+ A++ + K +VV+++ ++ G+ ++ + ++ +LF EM G+V +
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 271 VSVLSAC-GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+++ C N Q ++ G+ P + + +LD G +E A EVF+ +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQ--MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 330 SER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
+ ++ + +MI G G+ ++F + G KP+ +T+ +++ L+
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 386 SEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
E M+ + G P Y+ +I R G + ELI M
Sbjct: 557 QEAYALLKKMKED-GPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 165/395 (41%), Gaps = 85/395 (21%)
Query: 102 TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA-------------CSQM 148
T+ + + + R+ LA+ L M++ EP+ VTL ++L+ QM
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 149 GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSW 204
+EMG R + + + L LHN K VA L DRM R ++ ++
Sbjct: 182 --VEMGYR-PDTITFTTLIHGLFLHN-------KASEAVA---LVDRMVQRGCQPNLVTY 228
Query: 205 TSMVNGYAKCGDLENARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
+VNG K GD + A L++ +VV ++ ++ + ++L LF EM
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 261 AGVVPEEHALVSVLSACGQLSCL-NLGHWIHQHFV----IEKGMHPSVTLANAILDMYAK 315
G+ P +V++ +SCL + G W + IEK ++P++ NA++D + K
Sbjct: 289 KGIRP------NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 316 CGSIEAAAEVFNAISERNL---------------------------------------VS 336
G A ++++ + +R++ V+
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 337 WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTME 396
+N++I G+ + + + +F +M G D +T+ L+ H G Q+ F M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 397 RNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
+ G+ P YS ++D L G L++A E+ M
Sbjct: 463 SD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 68 ELLVRNGLIHFYADRGWLKHAREVFDESS----LKDVVTWTTMFDGYASRNCSELAMELF 123
+++ N LI + ++ E+F E S + D VT+TT+ G + A ++F
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC 183
M+ V P+ +T +L G +E V + M+K ++ + ++ +++ K
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 184 GSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENA----RRFLDQTPHKNVVSW 235
G + +LF + + +V ++ +M++G L+ A ++ + P N ++
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 236 SAMLAGYSQNNKPKESLKLFHEM 258
+ ++ + ++ S +L EM
Sbjct: 579 NTLIRAHLRDGDKAASAELIREM 601
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 146/312 (46%), Gaps = 13/312 (4%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
+VV ++T+ D + A+ LF M V PN +T +++S R+
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+M ++ + ++ NAL+D +VK G LV A +L+D M R D+F+++S++NG+
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
L+ A+ + K NVV+++ ++ G+ + + E ++LF EM G+V
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
+++ Q + + + V G+HP++ N +LD K G +E A VF +
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 331 ----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
E + ++N MI G G+ + ++F + G KPD I + +++ GL
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 387 EGQEYFYTMERN 398
E F M +
Sbjct: 558 EADALFRKMRED 569
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 186/389 (47%), Gaps = 18/389 (4%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG++ ++ + L++ Y + A + D+ D +T+TT+ G N +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ L + M++ +PN VT V++ + GDI++ + ME + ++ +++ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFL----DQTPH 229
D K A LF ME + +V +++S+++ +A R L ++ +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
NVV+++A++ + + K E+ KL+ EM+ + P+ S+++ L+ +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
+ +I K P+V N +++ + K I+ E+F +S+R N V++ ++I G+
Sbjct: 388 FE-LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
A VF QM G P+ +T+ LL G + + F ++R+ ++P
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTI 505
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
Y+ MI+ + + G +++ ++L S+ ++
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 180/423 (42%), Gaps = 86/423 (20%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA-------------C 145
++ T+ + + + R+ LA+ L M++ EP+ VTL ++L+
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 146 SQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DV 201
QM +EMG R + + + L LHN K VA L DRM R ++
Sbjct: 179 DQM--VEMGYR-PDTITFTTLIHGLFLHN-------KASEAVA---LVDRMVQRGCQPNL 225
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHE 257
++ +VNG K GD++ A L++ NVV +S ++ + ++L LF E
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 258 MMGAGVVPEEHALVSVLSACGQLSCL-NLGHWIHQHFV----IEKGMHPSVTLANAILDM 312
M GV P +V++ +SCL N W + IE+ ++P+V NA++D
Sbjct: 286 MENKGVRP------NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 313 YAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
+ K G + A ++++ + +R ++ +++S+I G+ + + +A ++F+ M P+
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 369 DITFVNLLTACSHGGLISEGQEYFYTMER------------------------------- 397
+T+ L+ I EG E F M +
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 398 ---NYGIKPKREHYSCMIDLLGRTGLLKEA---YELITSMPMQPCEAAWGALLNACRMHG 451
+ G+ P Y+ ++D L + G L++A +E + M+P + ++ G
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 452 NVE 454
VE
Sbjct: 520 KVE 522
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 69 LLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDG-YASRNCSELAMELF 123
++ N LI+ + + E+F E S + + VT+TT+ G + +R+C M +F
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM-VF 458
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC 183
M+ V PN +T +L + G +E V E +++ M ++ +N +++ K
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 184 GSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENA 220
G + +LF + + DV + +M++G+ + G E A
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 183/389 (47%), Gaps = 18/389 (4%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG++ ++ + L++ Y + A + D+ D +T+TT+ G N +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ L + M++ +PN VT V++ + GDI++ + ME + + + N ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK--- 230
D K + A LF MET+ +V +++S+++ G +A + L K
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 231 -NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
N+V+++A++ + + K E+ KL +M+ + P+ S+++ L+ +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----VSWNSMIAGYA 345
+ F++ K P + N ++ + K +E E+F +S R L V++ ++I G
Sbjct: 313 FE-FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
+G A VF QM G PD +T+ LL + G + + E F M+++ IK
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDI 430
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
Y+ MI+ + + G + + ++L S+ ++
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 141/328 (42%), Gaps = 50/328 (15%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
DVV + T+ D + A+ LF M + PN VT +++S G ++
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+M +K + +L NAL+D +VK G V A +L D M R D+F++ S++NG+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 215 GDLENARRFLDQTPHKNVV----SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
L+ A++ + K+ +++ ++ G+ ++ + ++ +LF EM G+V +
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 271 VSVLSAC-GQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+++ C N Q ++ G+ P + + +LD G +E A EVF+ +
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQ--MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 330 SER---------------------------------------NLVSWNSMIAGYAANGQA 350
+ N+V++N+MI+G +
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTA 378
++A + +M+ G PD T+ L+ A
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 166/398 (41%), Gaps = 85/398 (21%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSA-------------C 145
++ T+ + + + R+ LA+ L M++ EP+ VTL ++L+
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 146 SQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DV 201
QM +EMG R + + + L LHN K VA L DRM R ++
Sbjct: 104 DQM--VEMGYR-PDTITFTTLIHGLFLHN-------KASEAVA---LVDRMVQRGCQPNL 150
Query: 202 FSWTSMVNGYAKCGDLENARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHE 257
++ +VNG K GD++ A L++ +VV ++ ++ + ++L LF E
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 258 MMGAGVVPEEHALVSVLSACGQLSCL-NLGHWIHQHFV----IEKGMHPSVTLANAILDM 312
M G+ P +V++ +SCL + G W + IEK ++P++ NA++D
Sbjct: 211 METKGIRP------NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 313 YAKCGSIEAAAEVFNAISER---------------------------------------N 333
+ K G A ++ + + +R +
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 334 LVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFY 393
L ++N++I G+ + + + +F +M G D +T+ L+ H G Q+ F
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 394 TMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
M + G+ P YS ++D L G L++A E+ M
Sbjct: 385 QMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 87/217 (40%), Gaps = 39/217 (17%)
Query: 68 ELLVRNGLIHFYADRGWLKHAREVFDESS----LKDVVTWTTMFDGYASRNCSELAMELF 123
+L N LI + ++ E+F E S + D VT+TT+ G + A ++F
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 124 NLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKC 183
M+ V P+ +T +L G +E V + M+K ++ LD+Y+
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK---------LDIYI-- 432
Query: 184 GSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVSWSAML 239
+T+M+ G K G +++ K NVV+++ M+
Sbjct: 433 --------------------YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSA 276
+G +E+ L +M G +P+ +++ A
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 200/452 (44%), Gaps = 56/452 (12%)
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRN 114
V+ + G + +L+ + LI Y G L ++F ++ K DVV +++ D Y
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
A ++ ML + PN VT ++ Q G I ++ + K+ M S+ ++
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 175 ALLDMYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARRF----LDQ 226
+L+D + KCG+L + L++ M DV + +V+G +K G + +A RF L Q
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 227 TPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSAC--------- 277
+ NVV +++++ G+ + N+ E+LK+F M G+ P+ +V+
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 278 --------------GQLSCLNLGHWIHQHFVIEKGMH-----------PSVTLANAILDM 312
L+ L +H G+ + + N ++ +
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 313 YAKCGSIEAAAEVFNAI----SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
KC IE A++ FN + E ++V++N+MI GY + + +A +F+ ++ F P+
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 369 DITFVNLL-TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYEL 427
+T L+ C + + +G +++ G KP Y C++D ++ ++ +++L
Sbjct: 671 TVTLTILIHVLCKNNDM--DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 428 ITSMP---MQPCEAAWGALLNACRMHGNVELA 456
M + P ++ +++ G V+ A
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 148/309 (47%), Gaps = 14/309 (4%)
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
E+A L +L+L PN VT +++ + G+++ + + ME++ + L ++ L
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 177 LDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENA----RRFLDQTP 228
+D Y K G L +LF + + DV ++S ++ Y K GDL A +R L Q
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
NVV+++ ++ G Q+ + E+ ++ +++ G+ P S++ + L G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCG----SIEAAAEVFNAISERNLVSWNSMIAGY 344
+++ +I+ G P V + ++D +K G ++ + ++ N+V +NS+I G+
Sbjct: 448 LYED-MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK 404
+ +A+ VF M G KPD TF ++ G + E F+ M + G++P
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPD 565
Query: 405 REHYSCMID 413
Y +ID
Sbjct: 566 ALAYCTLID 574
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 160/358 (44%), Gaps = 18/358 (5%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAR----EVFDESSLKDVVTWTTMFDGYASRNCSE 117
K+G+ ++++ L+ + +G + HA ++ +S +VV + ++ DG+ N +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+++F LM ++P+ T V+ G +E + M K + + L+
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 178 DMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRFLDQ----TPH 229
D + K +LFD M+ + D+ +++ KC +E+A +F +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
++V+++ M+ GY + E+ ++F + P L ++ + + ++ G
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD-GAIR 692
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
+ EKG P+ ++D ++K IE + ++F + E+ ++VS++ +I G
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKP 403
G+ +A N+F Q PD + + L+ G + E + M RN G+KP
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVKP 809
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 173/402 (43%), Gaps = 51/402 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCV-- 59
++++I G+ K N F+ + M++ D + + + +G +H +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK-----QGLMLHAMRF 483
Query: 60 -VRKLGFDSEL--LVRNGLIHFYADRGWLKHAREVFDESSL----KDVVTWTTMFDGYAS 112
V+ LG L +V N LI + A +VF + DV T+TT+
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 113 RNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL 172
E A+ LF M + +EP+ + ++ A + +G ++ + M++ + + +
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 173 HNALLDMYVKCGSLVAARELFD-----RMETRDVFSWTSMVNGYAKCGDLENARR---FL 224
N ++ + KC + A + F+ +ME D+ ++ +M+ GY L+ A R L
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-DIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 225 DQTPH-KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL 283
TP N V+ + ++ +NN ++++F M G P +V C
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN-----AVTYGC------ 711
Query: 284 NLGHWIHQHFVIE-----------KGMHPSVTLANAILDMYAKCGSIEAAAEVFN-AISE 331
L W + IE KG+ PS+ + I+D K G ++ A +F+ AI
Sbjct: 712 -LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 332 R---NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
+ ++V++ +I GY G+ +A +++ M G KPDD+
Sbjct: 771 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 181/441 (41%), Gaps = 87/441 (19%)
Query: 75 LIHFYADRGWLKHAREVFD----ESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD 130
LI + G + A ++ + ++ DV+T+ M GY A+ + + M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---S 199
Query: 131 VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAR 190
V P+ VT +L + G ++ V + M +++ + + L++ + + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 191 ELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTP----HKNVVSWSAMLAGY 242
+L D M R DV ++ +VNG K G L+ A +FL+ P NV++ + +L
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEE---HALVSVLSACGQLS-CLNLGHWIHQH------ 292
+ ++ KL +M+ G P + L++ L G L +++ + QH
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 293 ------------------------FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
++ +G +P + N +L K G +E A E+ N
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 329 ISERN----LVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
+S + L+++N++I G A G+ +A+ + D+MR KPD IT+ +L+ S G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 385 ISEGQEYFYTMER----------------------------------NYGIKPKREHYSC 410
+ E ++F+ ER N G KP Y+
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 411 MIDLLGRTGLLKEAYELITSM 431
+I+ L G+ KEA EL+ +
Sbjct: 560 LIEGLAYEGMAKEALELLNEL 580
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 186/415 (44%), Gaps = 36/415 (8%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKA-CEELSGDFEGESVHCVV 60
+N MI GY KA N A S RM V D ++ L++ C+ SG + +++ +
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCD--SGKLK-QAMEVLD 228
Query: 61 RKLGFD--SELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRN 114
R L D +++ LI + HA ++ DE DVVT+ + +G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
+ A++ N M +PN +T +L + G ++ +M +K S+ N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 175 ALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK 230
L++ + G L A ++ ++M + S+ +++G+ K ++ A +L++ +
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 231 ----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP---EEHALVSVLSACGQLSCL 283
++V+++ ML ++ K ++++++ +++ G P + ++ L+ G+
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT--- 465
Query: 284 NLGHWIHQ-HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-----NLVSW 337
G I + K + P ++++ ++ G ++ A + F+ ER N V++
Sbjct: 466 --GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF-ERMGIRPNAVTF 522
Query: 338 NSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYF 392
NS++ G + Q +A++ M G KP++ ++ L+ ++ G+ E E
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 192/407 (47%), Gaps = 22/407 (5%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRNCSE 117
KLG++ ++ + L++ Y + A + D+ + + VT+ T+ G N +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
AM L + M+ +P+ VT V++ + GD ++ + ME+ + + ++N ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFL----DQTPH 229
D K + A LF MET+ +V +++S+++ G +A R L ++ +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
+V ++SA++ + + K E+ KL+ EM+ + P S+++ L+ +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
+ F++ K P V N ++ + K +E EVF +S+R N V++N +I G
Sbjct: 384 FE-FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
G A +F +M G P+ +T+ LL G + + F ++R+ ++P
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTI 501
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPM---QPCEAAWGALLNA-CR 448
Y+ MI+ + + G +++ ++L ++ + +P A+ +++ CR
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 159/344 (46%), Gaps = 14/344 (4%)
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE 159
V+ + T+ DG + A+ LF M + PN VT +++S G R+
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 160 NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCG 215
+M ++ + + +AL+D +VK G LV A +L+D M R + +++S++NG+
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 216 DLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
L+ A++ + K +VV+++ ++ G+ + + +E +++F EM G+V
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS- 330
++ Q ++ I + V + G+ P++ N +LD K G +E A VF +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 331 ---ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
E + ++N MI G G+ + ++F + G KPD + + +++ G E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
F M+ + G P Y+ +I R G + + ELI M
Sbjct: 555 ADALFKEMKED-GTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 170/375 (45%), Gaps = 27/375 (7%)
Query: 102 TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM 161
T++ + + + R+ LA+ + M++ EPN VTL ++L+ I + + M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 162 EKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDL 217
+ + N L+ A L DRM + D+ ++ +VNG K GD
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 218 ENARRFLDQTPH----KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSV 273
+ A L++ V+ ++ ++ G + ++L LF EM G+ P +V
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP------NV 291
Query: 274 LSACGQLSCL-NLGHWIHQHFV----IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
++ +SCL N G W + IE+ ++P V +A++D + K G + A ++++
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 329 ISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
+ +R ++V+++S+I G+ + + +A +F+ M PD +T+ L+
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTG---LLKEAYELITSMPMQPCEAAWG 441
+ EG E F M + G+ Y+ +I L + G + +E ++ + S + P +
Sbjct: 412 VEEGMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 442 ALLNACRMHGNVELA 456
LL+ +G +E A
Sbjct: 471 TLLDGLCKNGKLEKA 485
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 119/264 (45%), Gaps = 12/264 (4%)
Query: 25 MLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGW 84
M+ ++ D +F + A + E E ++ + K D ++ + LI+ +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 85 LKHAREVFD----ESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIA 140
L A+++F+ + DVVT+ T+ G+ E ME+F M + + N VT
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 141 VLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRD 200
++ Q GD +M + + + M + ++ +N LLD K G L A +F+ ++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 201 ----VFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESL 252
++++ M+ G K G +E+ K +VV+++ M++G+ + +E+
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 253 KLFHEMMGAGVVPEEHALVSVLSA 276
LF EM G +P +++ A
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRA 580
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 210/499 (42%), Gaps = 60/499 (12%)
Query: 18 AFSYFLRMLRHRVEMDCRSFVFALKA-CEELSGDFEGES-VHCVVRKLGFDSELLVRNGL 75
+S+ ML+ ++ D +F + C E G FE S + + K G+ ++ N +
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAE--GSFEKSSYLMQKMEKSGYAPTIVTYNTV 274
Query: 76 IHFYADRGWLKHAREVFDESSLKDV----------------------------------- 100
+H+Y +G K A E+ D K V
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 101 ----VTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRR 156
VT+ T+ +G+++ +A +L N ML + PN VT A++ G+ + +
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 157 VHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDV----FSWTSMVNGYA 212
+ ME K + S + LLD K AR + RM+ V ++T M++G
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454
Query: 213 KCGDLENARRFLDQTPH----KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEH 268
K G L+ A L++ ++V++SA++ G+ + + K + ++ + G+ P
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 269 ALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
+++ C ++ CL I++ ++E T N ++ K G + A E
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF-NVLVTSLCKAGKVAEAEEFMRC 573
Query: 329 ISE----RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
++ N VS++ +I GY +G+ +A +VFD+M +G P T+ +LL GG
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM---PMQPCEAAWG 441
+ E +++ ++ Y+ ++ + ++G L +A L M + P +
Sbjct: 634 LREAEKFLKSLHA-VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Query: 442 ALLNACRMHGNVELARLSA 460
+L++ G +A L A
Sbjct: 693 SLISGLCRKGKTVIAILFA 711
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 154/377 (40%), Gaps = 20/377 (5%)
Query: 75 LIHFYADRGWLKHAREVFDESSL----KDVVTWTTMFDGYASRNCSELAMELFNLMLRGD 130
LI Y G ++ + E+F L V T + ML+
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228
Query: 131 VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAR 190
+ P+ T +++ G E + + MEK ++ +N +L Y K G AA
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288
Query: 191 ELFDRMETR----DVFSWTSMVNGYAKCGDLENA----RRFLDQTPHKNVVSWSAMLAGY 242
EL D M+++ DV ++ +++ + + R + H N V+++ ++ G+
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Query: 243 SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIE-KGMHP 301
S K + +L +EM+ G+ P +++ G +S N + +++E KG+ P
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALID--GHISEGNFKEALKMFYMMEAKGLTP 406
Query: 302 SVTLANAILDMYAKCGSIEAAAEVFNAISERNL----VSWNSMIAGYAANGQAKQAVNVF 357
S +LD K + A + + + +++ MI G NG +AV +
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 358 DQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGR 417
++M G PD +T+ L+ G +E + R G+ P YS +I R
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGIIYSTLIYNCCR 525
Query: 418 TGLLKEAYELITSMPMQ 434
G LKEA + +M ++
Sbjct: 526 MGCLKEAIRIYEAMILE 542
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 159/373 (42%), Gaps = 22/373 (5%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
D V + T+ A+ LF M++ + P+ T +++S + G +
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 159 ENMEKK-NMRCSLNLHNALLDMYVKCGSLVAA---RELFDRM-ETRDVFSWTSMVNGYAK 213
+ E + N+ + ++ +D K G A RE D + T D+ + +M++GY++
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 214 CGDLENARRFL----DQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
G +E L +Q N+ +++ +L GYS+ S L+ ++ G++P++
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
S++ + + L +G I + F+ +G+ N ++ G I A ++ +
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFIC-RGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Query: 330 SERNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLI 385
+ + + ++M++ N + +++ V +M G P+ ++ L+ G I
Sbjct: 891 TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 950
Query: 386 SEGQEYFYTMER--NYGIKPKREHYSCMIDLLGRTGLLKEAYELI---TSMPMQPCEAAW 440
+ F E + I P S M+ L + G EA L+ M + P A++
Sbjct: 951 ---KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASF 1007
Query: 441 GALLNACRMHGNV 453
L++ C +GNV
Sbjct: 1008 TTLMHLCCKNGNV 1020
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 183/396 (46%), Gaps = 28/396 (7%)
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNC 115
+ KLG++ + + LI+ G + A E+ D D++T T+ +G
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
AM L + M+ +PN VT VL+ + G + + ME++N++ ++
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 176 LLDMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRFL-DQTPHK 230
++D K GSL A LF+ ME T ++ ++ ++ G+ G ++ + L D K
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 231 ---NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
NVV++S ++ + + K +E+ +L EM+ G+ P+ S++ + + L+ +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----VSWNSMIAG 343
+ ++ KG P++ N +++ Y K I+ E+F +S R + V++N++I G
Sbjct: 389 QM-VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 344 YAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYF-----YTMERN 398
+ G+ A +F +M P+ +T+ LL G + E F ME +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 399 YGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
GI Y+ +I + + +A++L S+P++
Sbjct: 508 IGI------YNIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 153/334 (45%), Gaps = 15/334 (4%)
Query: 92 FDESSLK-DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGD 150
+E ++K D V ++ + DG + A LFN M + N +T ++ G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 151 IEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTS 206
+ G ++ +M K+ + ++ + L+D +VK G L A EL M R D ++TS
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 207 MVNGYAKCGDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
+++G+ K L+ A + +D K N+ +++ ++ GY + N+ + L+LF +M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
VV + +++ +L LN+ + Q V K + P++ +LD G E A
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTYKILLDGLCDNGESEKA 492
Query: 323 AEVFNAIS----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
E+F I E ++ +N +I G + A ++F + G KP T+ ++
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 379 CSHGGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
G +SE + F ME + G P Y+ +I
Sbjct: 553 LCKKGPLSEAELLFRKMEED-GHAPDGWTYNILI 585
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 132/318 (41%), Gaps = 36/318 (11%)
Query: 75 LIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD 130
LI + G L+ A E+ E D +T+T++ DG+ N + A ++ +LM+
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 131 VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAR 190
+PN T +++ + I+ G + M + + +N L+ + + G L A+
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 191 ELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKE 250
ELF M +R V N+V++ +L G N + ++
Sbjct: 459 ELFQEMVSRKV---------------------------PPNIVTYKILLDGLCDNGESEK 491
Query: 251 SLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAIL 310
+L++F ++ + + + ++ S ++ W + KG+ P V N ++
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD-DAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 311 DMYAKCGSIEAAAEVFNAISERNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFK 366
K G + A +F + E ++N +I + +G A ++V + ++++ GF
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 367 PDDITFVNLLTACSHGGL 384
D T ++ S G L
Sbjct: 611 VDASTIKMVIDMLSDGRL 628
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 143/320 (44%), Gaps = 26/320 (8%)
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
K +++ LF +M+ + +P + SA + +L + + ++ H TL+
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 307 NAILDMYAKCGSI----EAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRC 362
+++ + +C + A ++ E N ++++++I G G+ +A+ + D+M
Sbjct: 128 -IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
MG KPD IT L+ G +E M YG +P Y +++++ ++G
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 423 EAYELITSMPMQPCE---AAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIY----- 474
A EL+ M + + + +++ HG+++ +A NL + + E GI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD----NAFNLFN-EMEMKGITTNIIT 300
Query: 475 --VLLANICANERKWGD-VKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSE 531
+L+ C N +W D K +R +++ K + S++ +D KE + + E
Sbjct: 301 YNILIGGFC-NAGRWDDGAKLLRDMIKRKINPNVVTFSVL-IDSFVKEGKLREAEELHKE 358
Query: 532 EIYKVL--DEIFLSSELEDY 549
I++ + D I +S ++ +
Sbjct: 359 MIHRGIAPDTITYTSLIDGF 378
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 156/344 (45%), Gaps = 14/344 (4%)
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE 159
VV + T+ D + A+ LF M + PN VT +++ G R+
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 160 NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCG 215
+M ++ + ++ +AL+D +VK G LV A +L+D M R D+F+++S++NG+
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 216 DLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
L+ A+ + K NVV+++ ++ G+ + + E ++LF EM G+V
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS- 330
+++ Q + + + V G+ P + + +LD G +E A VF +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMV-SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 331 ---ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
E ++ ++N MI G G+ + ++F + G KP+ +T+ +++ GL E
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
F M+ G P Y+ +I R G + ELI M
Sbjct: 555 ADALFREMKEE-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 185/395 (46%), Gaps = 30/395 (7%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL----------KDVVTWTTMFDGYA 111
KLG++ +++ N L++ + H + D SL D T+ T+ G
Sbjct: 144 KLGYEPDIVTLNSLLNGFC------HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 112 SRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLN 171
N + A+ L + M+ +P+ VT V++ + GDI++ + + ME+ + +
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFL--- 224
++N ++D ++ A LF M+ + +V ++ S++ G +A R L
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 225 -DQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL 283
++ + NVV++SA++ + + K E+ KL+ EM+ + P+ S+++ L
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 284 NLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNS 339
+ + + +I K P+V N ++ + K ++ E+F +S+R N V++ +
Sbjct: 378 DEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 340 MIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNY 399
+I G+ + A VF QM G PD +T+ LL + G + F ++R+
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS- 495
Query: 400 GIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
++P Y+ MI+ + + G +++ ++L S+ ++
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 149/331 (45%), Gaps = 24/331 (7%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
++ T++ + + + R+ LA+ + M++ EP+ VTL ++L+ I +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
M + + N L+ + A L DRM + D+ ++ +VNG K
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 215 GDLENARRFLDQTPH----KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
GD++ A L + VV ++ ++ ++L LF EM G+ P
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP----- 289
Query: 271 VSVLSACGQLSCL-NLGHWIHQHFV----IEKGMHPSVTLANAILDMYAKCGSIEAAAEV 325
+V++ + CL N G W + IE+ ++P+V +A++D + K G + A ++
Sbjct: 290 -NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 326 FNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
++ + +R ++ +++S+I G+ + + +A ++F+ M P+ +T+ L+
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
+ EG E F M + G+ Y+ +I
Sbjct: 409 AKRVDEGMELFREMSQR-GLVGNTVTYTTLI 438
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 301 PSVTLANAILDMYAKCGS----IEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNV 356
PS+ + +L AK I ++ N NL +++ +I + Q A+ V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 357 FDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG 416
+M +G++PD +T +LL HG IS+ M G +P ++ +I L
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE-MGYQPDSFTFNTLIHGLF 197
Query: 417 RTGLLKEAYELITSMPMQPCE---AAWGALLNACRMHGNVELARLSACNLLSLDPEDSG- 472
R EA L+ M ++ C+ +G ++N G+++LA LS + + G
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA-LSLLKKMEQGKIEPGV 256
Query: 473 -IYVLLANICANERKWGDVKRVRSLMRDKGVK 503
IY + + N + D + + M +KG++
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDG-YASRNCSELAMELFNLML 127
N LI + + E+F E S + + VT+TT+ G + +R C A +F M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN-AQIVFKQMV 458
Query: 128 RGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLV 187
V P+ +T +L G +E V E +++ M + +N +++ K G +
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 188 AARELFDRMETR----DVFSWTSMVNGYAKCGDLENA----RRFLDQTPHKNVVSWSAML 239
+LF + + +V ++T+M++G+ + G E A R ++ P + +++ ++
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 240 AGYSQNNKPKESLKLFHEM 258
+ ++ S +L EM
Sbjct: 579 RAHLRDGDKAASAELIREM 597
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 159/363 (43%), Gaps = 17/363 (4%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
DV + G+A A++L + + TL++++SA + G +
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
E + + ++ +NALL YVK G L A + ME R D +++ +++ Y
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 215 GDLENARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
G E+AR L + N +S +LAG+ + +++ ++ EM GV P+
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
V+ G+ +CL+ + E G+ P N ++D + K G A E+F A+
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSE-GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 331 ERN----LVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
R ++N MI Y + + +M+ G P+ +T L+ G +
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKE---AYELITSMPMQPCEAAWGAL 443
+ E M ++ G+KP Y+ +I+ + GL ++ A+ ++TS ++P A +L
Sbjct: 567 DAIECLEEM-KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 444 LNA 446
+NA
Sbjct: 626 INA 628
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 166/399 (41%), Gaps = 31/399 (7%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N +I G+ K+ +P+ A + + V + A + E E++ +R+
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVV----TWTTMFDGYASRNCSEL 118
G N L+ Y G LK A + E + V T++ + D Y + E
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A + M GDV+PN +L+ G+ + +V + M+ ++ +N ++D
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 179 MYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHKN--- 231
+ K L A FDRM + D +W ++++ + K G A + +
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 232 -VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPE---EHALVSVLSACGQ----LSCL 283
+++ M+ Y + + +L +M G++P LV V G+ + CL
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 284 NLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS----ERNLVSWNS 339
+ G+ PS T+ NA+++ YA+ G E A F ++ + +L++ NS
Sbjct: 573 EEMKSV--------GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 340 MIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
+I + + + +A V M+ G KPD +T+ L+ A
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 136/300 (45%), Gaps = 26/300 (8%)
Query: 238 MLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEK 297
++ G++++ P ++L+L G+ + LVS++SA + G + + E+
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALA-----DSGRTLEAEALFEE 329
Query: 298 ----GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLV----SWNSMIAGYAANGQ 349
G+ P NA+L Y K G ++ A + + + +R + +++ +I Y G+
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTME--RNYGIKPKREH 407
+ A V +M +P+ F LL G E Q+ F ++ ++ G+KP R+
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGVKPDRQF 446
Query: 408 YSCMIDLLGRTGLLKEA---YELITSMPMQPCEAAWGALLNACRMHGNVELAR--LSACN 462
Y+ +ID G+ L A ++ + S ++P W L++ HG +A A
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 463 LLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGV--KKIPGHSLVEVDGEFKEF 520
P + Y ++ N ++ +W D+KR+ M+ +G+ + +LV+V G+ F
Sbjct: 507 RRGCLP-CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 138/300 (46%), Gaps = 19/300 (6%)
Query: 249 KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANA 308
+E++++ + G + L+ + CG+ L +H+ +I V NA
Sbjct: 101 REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHE-CIIALVSPCDVGARNA 159
Query: 309 ILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
I++MY+ C S++ A +VF + E N + M+ + NG ++A+++F + + G KP+
Sbjct: 160 IIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPN 219
Query: 369 DITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELI 428
F + + C+ G + EG F M R YGI P EHY + +L +G L EA +
Sbjct: 220 GEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFV 279
Query: 429 TSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWG 488
MPM+P W L+N R+HG+VEL A + LD V A + A K
Sbjct: 280 ERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLD-KVSSAGLVAT--KAS 336
Query: 489 DVKRVRSLMRDKGVKKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEIFLSSELED 548
D VKK P S + F D SHPQ IY+ L + L S+L++
Sbjct: 337 DF-----------VKKEP--STRSEPYFYSTFRPVDSSHPQMNIIYETL--MSLRSQLKE 381
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 163/356 (45%), Gaps = 16/356 (4%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
DVV ++T+ D + A+ LF M + P+ T +++S G R+
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+M ++ + ++ N+L+D + K G L+ A +LFD M R ++ ++ S++NG+
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
L+ A++ K +VV+++ ++ G+ + K + ++LF +M G+V
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
+++ Q S + + + V + G+HP++ N +LD K G +E A VF +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 331 ----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
E ++ ++N M G G+ + ++F + G KPD I + +++ GL
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGA 442
E F M+ + G P Y+ +I R G + ELI M+ C A A
Sbjct: 538 EAYTLFIKMKED-GPLPDSGTYNTLIRAHLRDGDKAASAELIKE--MRSCRFAGDA 590
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 201/490 (41%), Gaps = 60/490 (12%)
Query: 87 HAREVFDESSLKDVVTWTTMFDGY---ASRNCS-----ELAMELFNLMLRGDVEPNEVTL 138
H R+ L+ + +DGY SRN + A++LF M++ P+ V
Sbjct: 9 HLRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEF 68
Query: 139 IAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET 198
+LSA ++M ++ E ME + +L +N +++ + L A + +M
Sbjct: 69 SKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM-- 126
Query: 199 RDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEM 258
M GY ++V+ +++L G+ N+ E++ L +M
Sbjct: 127 --------MKLGYG-----------------PSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 259 MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGS 318
+ G P+ +++ Q + + + + V+ KG P + A+++ K G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV-KGCQPDLVTYGAVINGLCKRGE 220
Query: 319 IEAAAEVFNAIS----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVN 374
+ A + N + E ++V ++++I A+N+F +M G +PD T+ +
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 375 LLTACSHGGLISEGQEYFYTM-ERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM-- 431
L++ + G S+ M ER I P ++ +ID + G L EA +L M
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERK--INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 432 -PMQPCEAAWGALLNACRMHGNVELARLSACNLLSLD--PEDSGIYVLLANICANERKWG 488
+ P + +L+N MH ++ A+ ++S D P+ L+ C ++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 489 DVKRVRSLMRDKGVKKIPGHSLVEVDGEFK-----------EFLVADESHPQSEEIYKVL 537
++ R + R V ++ + + G F+ + +V+D HP +L
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTL-IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 538 DEIFLSSELE 547
D + + +LE
Sbjct: 458 DGLCKNGKLE 467
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 12/264 (4%)
Query: 25 MLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGW 84
ML ++ + +F + A + E E + + + D ++ N LI+ +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 85 LKHAREVF----DESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIA 140
L A+++F + L DVVT+ T+ +G+ MELF M R + N VT
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 141 VLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR- 199
++ Q D + + V + M + ++ +N LLD K G L A +F+ ++
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 200 ---DVFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESL 252
D++++ M G K G +E+ K +V++++ M++G+ + +E+
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 253 KLFHEMMGAGVVPEEHALVSVLSA 276
LF +M G +P+ +++ A
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRA 564
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 179/422 (42%), Gaps = 54/422 (12%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG+ ++ N L++ + + A + D+ D VT+TT+ G N +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+ L M+ +P+ VT AV++ + G+ ++ + MEK + + ++N ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHKN-- 231
D K + A +LF++MET+ DVF++ +++ G +A R L KN
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 232 --------------------------------------VVSWSAMLAGYSQNNKPKESLK 253
VV+++ ++ G+ + + +E ++
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 254 LFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMY 313
+F EM G+V +++ Q + + + V + G+HP + N +LD
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGL 436
Query: 314 AKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDD 369
G++E A VF + +R ++V++ +MI G+ + ++F + G KP+
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 370 ITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELIT 429
+T+ +++ GL E F M+ + G P Y+ +I R G + ELI
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKED-GPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Query: 430 SM 431
M
Sbjct: 556 EM 557
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 139/333 (41%), Gaps = 50/333 (15%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
DVV + T+ DG + A +LFN M ++P+ T ++S G R+
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR-----DVFSWTSMVNGYAK 213
+M +KN+ L NAL+D +VK G LV A +L+D M DV ++ +++ G+ K
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 214 CGDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
+E + + N V+++ ++ G+ Q + +F +M+ GV P+
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 270 LVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI 329
+L + + + ++ ++ M + +++ K G +E ++F ++
Sbjct: 429 YNILLDGLCNNGNVETALVVFE-YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 330 SER----NLVSWNSMIAGYAANGQAKQAVNVF---------------------------- 357
S + N+V++ +M++G+ G ++A +F
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 358 -------DQMRCMGFKPDDITFVNLLTACSHGG 383
+MR GF D TF L+T H G
Sbjct: 548 AASAELIKEMRSCGFAGDASTF-GLVTNMLHDG 579
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 211/475 (44%), Gaps = 55/475 (11%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKA---CEELSGDFEGESVHCV 59
N +I + + P++A S + +M R+ ++ SF +K C +LS S
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL---STFGK 166
Query: 60 VRKLGFDSELLVRNGLIH----------------FYADRGWLKHAREVFD---ESSLKDV 100
+ KLGF +++ N L+H + + G+L+ A +FD E L V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPV 225
Query: 101 V-TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE 159
V T+ T+ +G A L N M+ + + VT +++ +MGD + +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 160 NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCG 215
ME+ +++ + +++A++D K G A+ LF M + +VF++ M++G+ G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 216 DLENARRFL----DQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
+A+R L ++ + +V++++A+++ + K E+ KL EM+ + P+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGM-----HPSVTLANAILDMYAKCGSIEAAAEVF 326
S++ G H F K M P V N I+D+Y + ++ ++
Sbjct: 406 SMI----------YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 327 NAISERNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
IS R LV ++N++I G+ A ++F +M G PD IT LL
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE 437
+ E E F ++ + I Y+ +I + + + EA++L S+P+ E
Sbjct: 516 EKLEEALELFEVIQMS-KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 159/348 (45%), Gaps = 11/348 (3%)
Query: 93 DESSLK-DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDI 151
+E+ +K DVV ++ + D A LF+ ML + PN T ++ G
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 152 EMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVF----SWTSM 207
+R+ +M ++ + + NAL+ VK G L A +L D M R +F ++ SM
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
+ G+ K ++A+ D +VV+++ ++ Y + + E ++L E+ G+V
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
+++ ++ LN + Q +I G+ P N +L + + +E A E+F
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQE-MISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 328 AIS----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGG 383
I + + V++N +I G + +A ++F + G +PD T+ +++
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
IS+ F+ M+ N G +P Y+ +I + G + ++ ELI+ M
Sbjct: 587 AISDANVLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 211/475 (44%), Gaps = 55/475 (11%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKA---CEELSGDFEGESVHCV 59
N +I + + P++A S + +M R+ ++ SF +K C +LS S
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL---STFGK 166
Query: 60 VRKLGFDSELLVRNGLIH----------------FYADRGWLKHAREVFD---ESSLKDV 100
+ KLGF +++ N L+H + + G+L+ A +FD E L V
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPV 225
Query: 101 V-TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE 159
V T+ T+ +G A L N M+ + + VT +++ +MGD + +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 160 NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCG 215
ME+ +++ + +++A++D K G A+ LF M + +VF++ M++G+ G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 216 DLENARRFL----DQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
+A+R L ++ + +V++++A+++ + K E+ KL EM+ + P+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGM-----HPSVTLANAILDMYAKCGSIEAAAEVF 326
S++ G H F K M P V N I+D+Y + ++ ++
Sbjct: 406 SMI----------YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 327 NAISERNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG 382
IS R LV ++N++I G+ A ++F +M G PD IT LL
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 383 GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCE 437
+ E E F ++ + I Y+ +I + + + EA++L S+P+ E
Sbjct: 516 EKLEEALELFEVIQMS-KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 159/348 (45%), Gaps = 11/348 (3%)
Query: 93 DESSLK-DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDI 151
+E+ +K DVV ++ + D A LF+ ML + PN T ++ G
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 152 EMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVF----SWTSM 207
+R+ +M ++ + + NAL+ VK G L A +L D M R +F ++ SM
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 208 VNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
+ G+ K ++A+ D +VV+++ ++ Y + + E ++L E+ G+V
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 268 HALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFN 327
+++ ++ LN + Q +I G+ P N +L + + +E A E+F
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQE-MISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 328 AIS----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGG 383
I + + V++N +I G + +A ++F + G +PD T+ +++
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 384 LISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
IS+ F+ M+ N G +P Y+ +I + G + ++ ELI+ M
Sbjct: 587 AISDANVLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 200/447 (44%), Gaps = 22/447 (4%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
N MI + + A+S ++++ E D +F +K L G E+V V R
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF-LEGKV-SEAVVLVDRM 184
Query: 63 L--GFDSELLVRNGLIHFYADRGWLKHAREVF---DESSLK-DVVTWTTMFDGYASRNCS 116
+ G +++ N +++ G A ++ +E ++K DV T++T+ D C
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
+ A+ LF M ++ + VT +++ + G G + ++M + + ++ N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 177 LDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLD----QTP 228
LD++VK G L A EL+ M TR ++ ++ ++++GY L A LD
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
++V++++++ GY + + +K+F + G+V ++ Q + L
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERN----LVSWNSMIAGY 344
+ Q V G+ P V +LD G +E A E+F + + +V + ++I G
Sbjct: 425 LFQEMV-SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK 404
G+ + A N+F + C G KP+ +T+ +++ G +SE ME + G P
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAPN 542
Query: 405 REHYSCMIDLLGRTGLLKEAYELITSM 431
Y+ +I R G L + +LI M
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 138/354 (38%), Gaps = 56/354 (15%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+NT++ GY + A + M+R++ D +F +K + +G V +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
K G + + + L+ + G +K A E+F E L DV+T+ + DG E
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A+E+F E+++K M + ++ ++
Sbjct: 456 KALEIF-----------------------------------EDLQKSKMDLGIVMYTTII 480
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENA----RRFLDQTPH 229
+ K G + A LF + + +V ++T M++G K G L A R+ +
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSV----LSACGQLS---C 282
N +++ ++ + ++ S KL EM G + ++ V LSA +L+ C
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYC 600
Query: 283 LNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS 336
L+ G Q +E + L++ C +I + V N I R + S
Sbjct: 601 LSKGSKSRQDL-LELSGSEKIRLSSLTFVKMFPCNTITTSLNV-NTIEARGMNS 652
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 190/413 (46%), Gaps = 33/413 (7%)
Query: 44 CEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKD 99
C +LS F S + KLG++ + + + LI+ G + A E+ D
Sbjct: 120 CRKLSLAF---SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 100 VVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHE 159
++T + +G A+ L + M+ +PNEVT VL + G + +
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 160 NMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCG 215
ME++ ++ ++ ++D K GSL A LF+ ME + D+ +T+++ G+ G
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 216 DLENARRFL-DQTPHK---NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALV 271
++ + L D K +VV++SA++ + + K +E+ +L EM+ G+ P+
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 272 SVLSA-CGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
S++ C + H + ++ KG P++ N +++ Y K I+ E+F +S
Sbjct: 357 SLIDGFCKENQLDKANHML--DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 331 ERNL----VSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
R + V++N++I G+ G+ + A +F +M +PD +++ LL G
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 387 EGQEYFYTMER-----NYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
+ E F +E+ + GI Y+ +I + + +A++L S+P++
Sbjct: 475 KALEIFEKIEKSKMELDIGI------YNIIIHGMCNASKVDDAWDLFCSLPLK 521
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 143/326 (43%), Gaps = 14/326 (4%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
D V ++ + DG + A LFN M + + + ++ G + G ++
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+M K+ + + +AL+D +VK G L A EL M R D ++TS+++G+ K
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
L+ A LD K N+ +++ ++ GY + N + L+LF +M GVV +
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 271 VSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS 330
+++ +L L + + Q V + + P + +LD G E A E+F I
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMV-SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 331 ----ERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLIS 386
E ++ +N +I G + A ++F + G KPD T+ ++ G +S
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 387 EGQEYFYTMERNYGIKPKREHYSCMI 412
E F ME + G P Y+ +I
Sbjct: 545 EADLLFRKMEED-GHSPNGCTYNILI 569
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 133/320 (41%), Gaps = 36/320 (11%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRNCSELAMELFNLMLR 128
+ LI + G L+ A E+ E + D VT+T++ DG+ N + A + +LM+
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVA 188
PN T +++ + I+ G + M + + +N L+ + + G L
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 189 ARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKP 248
A+ELF M +R V ++VS+ +L G N +P
Sbjct: 441 AKELFQEMVSRRV---------------------------RPDIVSYKILLDGLCDNGEP 473
Query: 249 KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANA 308
+++L++F ++ + + + ++ S ++ W + KG+ P V N
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD-DAWDLFCSLPLKGVKPDVKTYNI 532
Query: 309 ILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG 364
++ K GS+ A +F + E N ++N +I + G A ++ + ++++ G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 365 FKPDDITFVNLLTACSHGGL 384
F D T ++ S G L
Sbjct: 593 FSVDASTVKMVVDMLSDGRL 612
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 195/407 (47%), Gaps = 22/407 (5%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+N++I G KA+ + A S+ + M+ + ++ + ++ + E S + +R
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHA----REVFDESSLKDVVTWTTMFDGYASRNCSE 117
+ G ++ GLI+ Y +G + A R + D+ L D T+T + +G + +
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A E+F M + P+ + +++ S++G+++ + + M ++ + ++ ++N LL
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
+ + G + A+EL D M + + ++ ++++GY K GDL A R D+ K +V
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 234 S----WSAMLAGYSQNNKPKESLKLF--HEMMGAGVVPEEHALVSVLSACG--QLSCLNL 285
++ ++ G + N + ++ +F ++ A +AL++ + G +L L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----VSWNSMI 341
+ F ++ P+ N ++D K G++EAA E+F+ + NL +++ S++
Sbjct: 790 NRLMDGSF--DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 342 AGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG 388
GY G+ + VFD+ G +PD I + ++ A G+ ++
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 168/417 (40%), Gaps = 55/417 (13%)
Query: 83 GWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVL 142
G +E+ +VV +TT+ + + AM + M + P+ +++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 143 SACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRDVF 202
S+ ++ R M + ++ + + A + Y++ +A + M V
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 203 S----WTSMVNGYAKCGDLENA----RRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKL 254
T ++N Y K G + A R +DQ + +++ ++ G +N+K ++ ++
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 255 FHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYA 314
F EM G G+ P+ + +++ +L + I V E+G+ P+V + N +L +
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV-EEGLTPNVIIYNMLLGGFC 673
Query: 315 KCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
+ G IE A E+ + +S + N V++ ++I GY +G +A +FD+M+ G PD
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERN-------------------------------- 398
+ L+ C + F T ++
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 399 ------YGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP---MQPCEAAWGALLNA 446
+G KP Y+ MID L + G L+ A EL M + P + +LLN
Sbjct: 794 DGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 165/394 (41%), Gaps = 50/394 (12%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+ ++ G K + A F M + D S+ + +L + S+ +
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRNCSE 117
+ G +++ N L+ + G ++ A+E+ DE S+K + VT+ T+ DGY
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A LF+ M + P+ ++ C ++ D+E + KK S NAL+
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALI 773
Query: 178 DMYVKCGSLVAAREL--------FDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPH 229
+ K G E+ FDR + ++ M++ K G+LE A+ Q +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 230 KN----VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL 285
N V++++++L GY + + E +F E + AG+ P+ H + SV
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD-HIMYSV------------ 880
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE---RNLVSWNSMIA 342
I F+ E ++ L + M+AK NA+ + ++ + ++++
Sbjct: 881 ---IINAFLKEGMTTKALVLVD---QMFAK-----------NAVDDGCKLSISTCRALLS 923
Query: 343 GYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
G+A G+ + A V + M + + PD T + L+
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/481 (19%), Positives = 203/481 (42%), Gaps = 38/481 (7%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEM-----DCRSFVFALKAC-EELSGDFEGES 55
++ +I G K RN + A M+ H + + DC V + + E+ F+G
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVV----TWTTMFDGYA 111
G + LI Y ++ E+ E +++V T+ T+ G
Sbjct: 375 AS------GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 112 SRNCSELAMELFNLMLRGDVEPNEV---TLIAVLSACSQMGDIEMGRRVHENMEKKNMRC 168
S + A + M+ PN V TLI S+ GD RV + M+++ +
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD---AMRVLKEMKEQGIAP 485
Query: 169 SLNLHNALLDMYVKCGSLVAAR----ELFDRMETRDVFSWTSMVNGYAKCGDLENARRFL 224
+ +N+L+ K + AR E+ + + F++ + ++GY + + +A +++
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 225 DQTPH----KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQL 280
+ N V + ++ Y + K E+ + M+ G++ + +++ +
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 281 SCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVS 336
++ I + + KG+ P V +++ ++K G+++ A+ +F+ + E N++
Sbjct: 606 DKVDDAEEIFRE-MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 337 WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTME 396
+N ++ G+ +G+ ++A + D+M G P+ +T+ ++ G ++E F M+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 397 RNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPM--QPCEAAWGALLNACRMHGNVE 454
G+ P Y+ ++D R ++ A + + A + AL+N G E
Sbjct: 725 LK-GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 455 L 455
L
Sbjct: 784 L 784
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/490 (19%), Positives = 193/490 (39%), Gaps = 76/490 (15%)
Query: 99 DVVTWTTMFDGYASRNCSELA-------------------------------MELFNLML 127
D V + +FDGY ++ E A ++LF +
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 128 RGDVEPNEV----TLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL-LDMYVK 182
+G VE N V T ++ A + G++++G+ V EK+ +LN+ AL L +
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269
Query: 183 CGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV----SWSAM 238
C LV + +++ +++G K LE+A+ L + V ++S +
Sbjct: 270 CKGLVPLK-----------YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318
Query: 239 LAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKG 298
+ G + + L HEM+ G+ + + + + + + +I G
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG-MIASG 377
Query: 299 MHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLV----SWNSMIAGYAANGQAKQAV 354
+ P ++++ Y + ++ E+ + +RN+V ++ +++ G ++G A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 355 NVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDL 414
N+ +M G +P+ + + L+ + M+ GI P Y+ +I
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIG 496
Query: 415 LGRTGLLKEAYELITSM---PMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDPEDS 471
L + + EA + M ++P +GA ++ G +E + ++ + + +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS-----GYIEASEFASADKYVKEMREC 551
Query: 472 GIY---VLLANICANERKWGDVKRVRSLMR---DKGVKKIPGHSLVEVDGEFKEFLVADE 525
G+ VL + K G V S R D+G+ V ++G FK V D
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD- 610
Query: 526 SHPQSEEIYK 535
+EEI++
Sbjct: 611 ----AEEIFR 616
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 164/356 (46%), Gaps = 18/356 (5%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG++ + + L++ + R + A + D+ D+V + + D
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A + F + R + PN VT A+++ R+ +M KK + ++ ++ALL
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK--- 230
D +VK G ++ A+ELF+ M D+ +++S++NG ++ A + D K
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 231 -NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
+VVS++ ++ G+ + + ++ +KLF EM G+V +++ Q ++
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
G+ P + N +L G +E A +F + +R ++V++ ++I G
Sbjct: 388 FSQMDFF-GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGI 401
G+ ++A ++F + G KPD +T+ +++ GL+ E E YT + G+
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE-VEALYTKMKQEGL 501
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 164/356 (46%), Gaps = 30/356 (8%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
D+ T+ + + + LA+ + ML+ EP+ VT+ ++++ + + +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKC 214
+ M + + + +NA++D K + A + F +E + +V ++T++VNG
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 215 GDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHAL 270
+A R L K NV+++SA+L + +N K E+ +LF EM+ + P+ +
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD---I 295
Query: 271 VSVLSACGQLSCLNLGHWIHQHF--VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
V+ S L + +Q F ++ KG V N +++ + K +E ++F
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 329 ISERNLVS----WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
+S+R LVS +N++I G+ G +A F QM G PD T+ LL G
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 385 ISEGQEYFYTMERNYGIKPKRE------HYSCMIDLLGRTGLLKEAYELITSMPMQ 434
+ + F M+ KRE Y+ +I + +TG ++EA+ L S+ ++
Sbjct: 416 LEKALVIFEDMQ-------KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 158/354 (44%), Gaps = 19/354 (5%)
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A++LF+ M++ P+ V +LSA ++ ++ + + ME +R L N +++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 179 MYVKCGSLVAARELFDRMET----RDVFSWTSMVNGYAKCGDLENARRFLDQTPH----K 230
+ C + A + +M D + S+VNG+ + + +A +D+
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSA-CGQLSCLNLGHWI 289
++V+++A++ + + ++ F E+ G+ P ++++ C + +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS----ERNLVSWNSMIAGYA 345
+I+K + P+V +A+LD + K G + A E+F + + ++V+++S+I G
Sbjct: 249 SD--MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
+ + +A +FD M G D +++ L+ + +G + F M + G+
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNT 365
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMP---MQPCEAAWGALLNACRMHGNVELA 456
Y+ +I + G + +A E + M + P + LL +G +E A
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 189/410 (46%), Gaps = 22/410 (5%)
Query: 64 GFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRNCSELA 119
G + N +I G ++ AR +F+E + D VT+ +M DG+ +
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
+ F M EP+ +T A+++ + G + +G + M+ ++ ++ ++ L+D
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 180 YVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRF----LDQTPHKN 231
+ K G + A + + M + +++TS+++ K G+L +A R L N
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
VV+++A++ G + KE+ +LF +M AGV+P + +++ G + N+ +
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH--GFVKAKNMDRALEL 494
Query: 292 HFVIE-KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE----RNLVSWNSMIAGYAA 346
++ +G+ P + L + IEAA V N + E N + + +++ Y
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE 406
+G + +++ D+M+ + + +TF L+ L+S+ +YF + ++G++
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 407 HYSCMIDLLGRTGLLKEAYELITSMPMQ---PCEAAWGALLNACRMHGNV 453
++ MID L + ++ A L M + P A+ +L++ GNV
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 157/363 (43%), Gaps = 51/363 (14%)
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
E A++ F+ M R V P + +L +++G + +R ++M R ++ +N +
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268
Query: 177 LDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTP---- 228
+D K G + AAR LF+ M+ R D ++ SM++G+ K G L++ F ++
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 229 -----------------------------------HKNVVSWSAMLAGYSQNNKPKESLK 253
NVVS+S ++ + + ++++K
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 254 LFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMY 313
+ +M G+VP E+ S++ A ++ L+ + +++ G+ +V A++D
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE-MLQVGVEWNVVTYTALIDGL 447
Query: 314 AKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDD 369
++ A E+F + NL S+N++I G+ +A+ + ++++ G KPD
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 370 ITFVNLLTA-CSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELI 428
+ + + CS + E + + GIK Y+ ++D ++G E L+
Sbjct: 508 LLYGTFIWGLCSLEKI--EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 429 TSM 431
M
Sbjct: 566 DEM 568
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 175/419 (41%), Gaps = 64/419 (15%)
Query: 66 DSELLVRNGLIHFYADRGWLKHAREVFDE---SSLK-DVVTWTTMFDGYASRNCSELAME 121
+ +++ N LI+ + G L E + E + LK +VV+++T+ D + + A++
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYV 181
+ M R + PNE T +++ A ++G++ R+ M + + ++ + AL+D
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 182 KCGSLVAARELFDRMETRDVF----SWTSMVNGYAKCGDLENARRFLDQTPHK------- 230
+ A ELF +M+T V S+ ++++G+ K +++ A L++ +
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 231 --------------------------------NVVSWSAMLAGYSQNNKPKESLKLFHEM 258
N + ++ ++ Y ++ P E L L EM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 259 MGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ------HFVIEKGMHPSVTLANAILDM 312
E V+V++ C + L + + + G+ + + A++D
Sbjct: 569 ------KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 313 YAKCGSIEAAAEVFNAISERNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
K +EAA +F + ++ LV ++ S++ G G +A+ + D+M +G K D
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 369 DITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYEL 427
+ + +L+ SH + + + + M GI P ++ G + EA EL
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEM-IGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 190/482 (39%), Gaps = 54/482 (11%)
Query: 2 WNTMIRGYRKARNP-NIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVV 60
+N ++ + K P N S +M + D ++ + C+ S E V +
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 61 RKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL----KDVVTWTTMFDGYASRNCS 116
+ GF + + N L+ Y K A +V +E L +VT+ ++ YA
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
+ AMEL N M +P+ T +LS + G +E + E M + ++ NA
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 177 LDMYVKCGSLVAARELFDRME----TRDVFSW---------------------------- 204
+ MY G ++FD + + D+ +W
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Query: 205 -------TSMVNGYAKCGDLENA----RRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLK 253
++++ Y++CG E A RR LD ++ +++ +LA ++ ++S K
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Query: 254 LFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMY 313
+ EM P E S+L A + L H + + V + P L ++ +
Sbjct: 546 VLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE-VYSGVIEPRAVLLKTLVLVC 604
Query: 314 AKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDD 369
+KC + A F+ + ER ++ + NSM++ Y +A V D M+ GF P
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 370 ITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELIT 429
T+ +L+ S + +E + GIKP Y+ +I R +++A + +
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAK-GIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 430 SM 431
M
Sbjct: 724 EM 725
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 156/327 (47%), Gaps = 17/327 (5%)
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A +FN + + + +++SA + G V + ME+ + +L +N +L+
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 179 MYVKCGSL-VAARELFDRMET----RDVFSWTSMVNGYAKCGDL--ENARRFLDQTP--- 228
++ K G+ L ++M++ D +++ +++ K G L E A+ F +
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGF 310
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
+ V+++A+L Y ++++PKE++K+ +EM+ G P S++SA + L+
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF----NAISERNLVSWNSMIAGY 344
+ EKG P V +L + + G +E+A +F NA + N+ ++N+ I Y
Sbjct: 371 LKNQMA-EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK 404
G+ + + +FD++ G PD +T+ LL G+ SE F M+R G P+
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPE 488
Query: 405 REHYSCMIDLLGRTGLLKEAYELITSM 431
RE ++ +I R G ++A + M
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRM 515
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 179/429 (41%), Gaps = 20/429 (4%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+N++I Y + + A +M + D ++ L E S+ +R
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSL----KDVVTWTTMFDGYASRNCSE 117
G + N I Y +RG ++FDE ++ D+VTW T+ +
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
+F M R P T ++SA S+ G E V+ M + L+ +N +L
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 178 DMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV 233
+ G + ++ ME + ++ S+++ YA ++ ++ + V+
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV-YSGVI 590
Query: 234 SWSAMLAGY-----SQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
A+L S+ + E+ + F E+ G P+ L S++S G+ + +
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGY 344
+ ++ E+G PS+ N+++ M+++ + E+ I + +++S+N++I Y
Sbjct: 651 VLD-YMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPK 404
N + + A +F +MR G PD IT+ + + + + E M + +G +P
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPN 768
Query: 405 REHYSCMID 413
+ Y+ ++D
Sbjct: 769 QNTYNSIVD 777
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 57/278 (20%)
Query: 309 ILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVF------- 357
I+ M K G + +AA +FN + E ++ S+ S+I+ +A +G+ ++AVNVF
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 358 -----------------------------DQMRCMGFKPDDITFVNLLTACSHGGLISEG 388
++M+ G PD T+ L+T C G L E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 389 QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ---PCEAAWGALLN 445
+ F M + G + Y+ ++D+ G++ KEA +++ M + P + +L++
Sbjct: 299 AQVFEEM-KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 446 ACRMHGNVELARLSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL---MRDKGV 502
A G ++ A + N ++ ++ + ER G V+ S+ MR+ G
Sbjct: 358 AYARDGMLDEA-MELKNQMAEKGTKPDVFTYTTLLSGFERA-GKVESAMSIFEEMRNAGC 415
Query: 503 KKIPGHSLVEVDGEFKEFLVADESHPQSEEIYKVLDEI 540
K P F F+ + + E+ K+ DEI
Sbjct: 416 K--PNIC------TFNAFIKMYGNRGKFTEMMKIFDEI 445
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/277 (18%), Positives = 122/277 (44%), Gaps = 16/277 (5%)
Query: 54 ESVHCVVRKL---GFDSELLVRNGLIHFYADRGWLKHAREVF----DESSLKDVVTWTTM 106
E V R++ G +L N ++ A G + + +V D + +T+ ++
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 107 FDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNM 166
YA+ L L + G +EP V L ++ CS+ + R ++++
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 167 RCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDL----E 218
+ N+++ +Y + + A + D M+ R + ++ S++ +++ D E
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 219 NARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACG 278
R L + +++S++ ++ Y +N + +++ ++F EM +G+VP+ + + +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 279 QLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAK 315
S + + ++I+ G P+ N+I+D Y K
Sbjct: 746 ADSMFEEAIGVVR-YMIKHGCRPNQNTYNSIVDGYCK 781
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 177/395 (44%), Gaps = 40/395 (10%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRNCSELAMELFNLMLR 128
N +IHF G +K A + LK DV++++T+ +GY + +L +M R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVA 188
++PN +++ ++ + M ++ + ++ L+D + K G + A
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 189 ARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKP 248
A + F M +RD+ TP +V++++A+++G+ Q
Sbjct: 370 ASKFFYEMHSRDI-------------------------TP--DVLTYTAIISGFCQIGDM 402
Query: 249 KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANA 308
E+ KLFHEM G+ P+ +++ + + +H H +I+ G P+V
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH-MIQAGCSPNVVTYTT 461
Query: 309 ILDMYAKCGSIEAAAEVFNAI----SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG 364
++D K G +++A E+ + + + N+ ++NS++ G +G ++AV + + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 365 FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEA 424
D +T+ L+ A G + + QE M G++P ++ +++ G+L++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 425 YELITSM---PMQPCEAAWGALLNACRMHGNVELA 456
+L+ M + P + +L+ + N++ A
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 171/390 (43%), Gaps = 20/390 (5%)
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRN 114
V+++ G + +I L A E F E L D V +TT+ DG+ R
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGD-IEMGRRVHENMEKKNMRCSLNLH 173
A + F M D+ P+ +T A++S Q+GD +E G+ HE M K +
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE-MFCKGLEPDSVTF 424
Query: 174 NALLDMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRFLDQT-- 227
L++ Y K G + A + + M + +V ++T++++G K GDL++A L +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 228 --PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL 285
N+ ++++++ G ++ +E++KL E AG+ + +++ A + ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMI 341
I + ++ KG+ P++ N +++ + G +E ++ N + + N ++NS++
Sbjct: 545 AQEILKE-MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 342 AGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGI 401
Y K A ++ M G PD T+ NL+ + E F M + G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM-KGKGF 662
Query: 402 KPKREHYSCMIDLLGRTGLLKEAYELITSM 431
YS +I + EA E+ M
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 174/378 (46%), Gaps = 18/378 (4%)
Query: 52 EGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKD----VVTWTTMF 107
E E + + G + +V LI + RG ++ A + F E +D V+T+T +
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 108 DGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
G+ A +LF+ M +EP+ VT +++ + G ++ RVH +M +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARRF 223
++ + L+D K G L +A EL M ++F++ S+VNG K G++E A +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 224 LDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQ 279
+ + + + V+++ ++ Y ++ + ++ ++ EM+G G+ P +++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 280 LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----V 335
L G + ++++ KG+ P+ T N+++ Y +++AA ++ + R +
Sbjct: 574 HGMLEDGEKL-LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM 395
++ +++ G+ K+A +F +M+ GF T+ L+ E +E F M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 396 ERNYGIKPKREHYSCMID 413
R G+ +E + D
Sbjct: 693 RRE-GLAADKEIFDFFSD 709
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 177/395 (44%), Gaps = 40/395 (10%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRNCSELAMELFNLMLR 128
N +IHF G +K A + LK DV++++T+ +GY + +L +M R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVA 188
++PN +++ ++ + M ++ + ++ L+D + K G + A
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 189 ARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKP 248
A + F M +RD+ TP +V++++A+++G+ Q
Sbjct: 370 ASKFFYEMHSRDI-------------------------TP--DVLTYTAIISGFCQIGDM 402
Query: 249 KESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANA 308
E+ KLFHEM G+ P+ +++ + + +H H +I+ G P+V
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH-MIQAGCSPNVVTYTT 461
Query: 309 ILDMYAKCGSIEAAAEVFNAI----SERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMG 364
++D K G +++A E+ + + + N+ ++NS++ G +G ++AV + + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 365 FKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEA 424
D +T+ L+ A G + + QE M G++P ++ +++ G+L++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEM-LGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 425 YELITSM---PMQPCEAAWGALLNACRMHGNVELA 456
+L+ M + P + +L+ + N++ A
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 171/390 (43%), Gaps = 20/390 (5%)
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRN 114
V+++ G + +I L A E F E L D V +TT+ DG+ R
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGD-IEMGRRVHENMEKKNMRCSLNLH 173
A + F M D+ P+ +T A++S Q+GD +E G+ HE M K +
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE-MFCKGLEPDSVTF 424
Query: 174 NALLDMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRFLDQT-- 227
L++ Y K G + A + + M + +V ++T++++G K GDL++A L +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 228 --PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNL 285
N+ ++++++ G ++ +E++KL E AG+ + +++ A + ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 286 GHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMI 341
I + ++ KG+ P++ N +++ + G +E ++ N + + N ++NS++
Sbjct: 545 AQEILKE-MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 342 AGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGI 401
Y K A ++ M G PD T+ NL+ + E F M + G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM-KGKGF 662
Query: 402 KPKREHYSCMIDLLGRTGLLKEAYELITSM 431
YS +I + EA E+ M
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 174/378 (46%), Gaps = 18/378 (4%)
Query: 52 EGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKD----VVTWTTMF 107
E E + + G + +V LI + RG ++ A + F E +D V+T+T +
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 108 DGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
G+ A +LF+ M +EP+ VT +++ + G ++ RVH +M +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARRF 223
++ + L+D K G L +A EL M ++F++ S+VNG K G++E A +
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 224 LDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQ 279
+ + + + V+++ ++ Y ++ + ++ ++ EM+G G+ P +++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 280 LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----V 335
L G + ++++ KG+ P+ T N+++ Y +++AA ++ + R +
Sbjct: 574 HGMLEDGEKL-LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTM 395
++ +++ G+ K+A +F +M+ GF T+ L+ E +E F M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 396 ERNYGIKPKREHYSCMID 413
R G+ +E + D
Sbjct: 693 RRE-GLAADKEIFDFFSD 709
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 18/358 (5%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSE 117
KLG + ++ L++ + + A +FD+ +VV + T+ DG +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
A++L N M + + P+ VT +++S G R+ M K+ + + NAL+
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNG---YAKCGDLENARRFL-DQTPH 229
D VK G + A E ++ M R D+ +++ ++ G Y++ + E F+ +
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 230 KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
+VV++S ++ GY ++ K + +KLF EM GVV ++ + LN+ I
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYA 345
+ V G+HP++ N +L G IE A + + + ++V++N +I G
Sbjct: 384 FRRMVF-CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKP 403
G+ A +++ + C G PD T+ ++ GL E F M+ + GI P
Sbjct: 443 KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED-GILP 499
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 37/363 (10%)
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
+++LF M++ P+ +LSA S+M ++ + E M+ + +L N LL+
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 179 MYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARRFLDQTP----HK 230
+ +C L A +M + ++ S++NG+ + + +A DQ
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPE---EHALVSVLSACGQ-------L 280
NVV ++ ++ G ++ + +L L + M G+ P+ ++L+S L + G+ +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 281 SCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----VS 336
SC+ ++ ++P V NA++D K G + A E + + R+L V+
Sbjct: 245 SCMT-----------KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 337 WNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTME 396
++ +I G + +A +F M G PD +T+ L+ + G + F M
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 397 RNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM---PMQPCEAAWGALLNACRMHGNV 453
+ G+ Y+ +I R G L A E+ M + P + LL+ +G +
Sbjct: 354 QR-GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 454 ELA 456
E A
Sbjct: 413 EKA 415
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+N +I K + A ++ M+R ++ D ++ + S E E + +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAREVFDESS----LKDVVTWTTMFDGYASRNCSE 117
G +++ + LI+ Y ++H ++F E S +++ VT+T + GY
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
+A E+F M+ V PN +T +L G IE + +M+K M + +N ++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 178 DMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCG 215
K G + A +++ + + D++++T+M+ G K G
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 184/412 (44%), Gaps = 44/412 (10%)
Query: 73 NGLIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR 128
N LI + G + A +FD+ L +VVT+ T+ DGY + +L M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCG---- 184
+EPN ++ V++ + G ++ V M ++ +N L+ Y K G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 185 SLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVSWSAMLA 240
+LV E+ T V ++TS+++ K G++ A FLDQ + N +++ ++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 241 GYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF------- 293
G+SQ E+ ++ EM G P SV++ ++ GH +
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSP------SVVTYNALIN----GHCVTGKMEDAIAVL 438
Query: 294 --VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----VSWNSMIAGYAAN 347
+ EKG+ P V + +L + + ++ A V + E+ + ++++S+I G+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTA-CSHGGLISEGQEYFYTMERNYGIKPKRE 406
+ K+A +++++M +G PD+ T+ L+ A C G L Q + +E+ G+ P
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK--GVLPDVV 556
Query: 407 HYSCMIDLLGRTGLLKEAYELITSMPMQ---PCEAAWGALLNACRMHGNVEL 455
YS +I+ L + +EA L+ + + P + + L+ C N+E
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC---SNIEF 605
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 171/375 (45%), Gaps = 22/375 (5%)
Query: 100 VVTWTTMFDGY--ASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRV 157
V+++ + D + RN S A +F ML V PN T ++ G+I++ +
Sbjct: 169 VLSYNAVLDATIRSKRNIS-FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 158 HENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAK 213
+ ME K ++ +N L+D Y K + +L M + ++ S+ ++NG +
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 214 CGDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
G ++ L + + + V+++ ++ GY + ++L + EM+ G+ P
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 270 LVSVLSACGQLSCLNLG-HWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNA 328
S++ + + +N ++ Q V +G+ P+ ++D +++ G + A V
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRV--RGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 329 ISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGL 384
+++ ++V++N++I G+ G+ + A+ V + M+ G PD +++ +L+
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 385 ISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEA---YELITSMPMQPCEAAWG 441
+ E M GIKP YS +I KEA YE + + + P E +
Sbjct: 466 VDEALRVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 442 ALLNACRMHGNVELA 456
AL+NA M G++E A
Sbjct: 525 ALINAYCMEGDLEKA 539
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 194/450 (43%), Gaps = 28/450 (6%)
Query: 89 REVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQM 148
+E+ + +V T+ + G+ ++A+ LF+ M PN VT ++ ++
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 149 GDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSW 204
I+ G ++ +M K + +L +N +++ + G + + M R D ++
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 205 TSMVNGYAKCGDLENA----RRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMG 260
+++ GY K G+ A L +V+++++++ + +++ +M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 261 AGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIE 320
G+ P E +++ Q +N + + + + + G PSV NA+++ + G +E
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE-MNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 321 AAAEVFNAISERNL----VSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLL 376
A V + E+ L VS++++++G+ + +A+ V +M G KPD IT+ +L+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 377 TACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ-- 434
E + + M R G+ P Y+ +I+ G L++A +L M +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 435 -PCEAAWGALLNACRMHGNVELARLSACNLLSLD--PEDSGIYVLLANICANERKWGDVK 491
P + L+N A+ L + P D + L+ N C+N + K
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNI----EFK 606
Query: 492 RVRSLMRDKGVKKIPGHSLVEVDGEFKEFL 521
V SL++ +K + + E D F+ L
Sbjct: 607 SVVSLIKGFCMKGM----MTEADQVFESML 632
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 180/412 (43%), Gaps = 57/412 (13%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKA-CEELSGDFEGESVHCVV 60
+NT+I+GY K N + A MLRH + ++ + + C+ +G+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK--AGNMN-------- 362
Query: 61 RKLGFDSELLVR---------NGLIHFYADRGWLKHA----REVFDESSLKDVVTWTTMF 107
R + F ++ VR L+ ++ +G++ A RE+ D VVT+ +
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 108 DGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
+G+ E A+ + M + P+ V+ VLS + D++ RV M +K ++
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARRF 223
+++L+ + + A +L++ M D F++T+++N Y GDLE A +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 224 LDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQ 279
++ K +VV++S ++ G ++ ++ +E+ +L ++ VP +
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD------------ 590
Query: 280 LSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----V 335
+ H +IE + +++ + G + A +VF ++ +N
Sbjct: 591 ---------VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641
Query: 336 SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
++N MI G+ G ++A ++ +M GF +T + L+ A G ++E
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 178/399 (44%), Gaps = 42/399 (10%)
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVF----DESSLKDVVTWTTMFDGYASRNC 115
+++ GF ++ LI+ Y G + A EV +E ++ T++ M +G+
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
A +F M++ ++P+ + ++SA MG+++ + + M+K R +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVVSW 235
++ Y K G + + E+FD M +CG + F
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMR---------------RCGCVPTVHTF------------ 627
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVI 295
+ ++ G + + ++++++ EM AGV EH ++ G S + G +
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ--GYASVGDTGKAFEYFTRL 685
Query: 296 E-KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS----WNSMIAGYAANGQA 350
+ +G+ + A+L K G +++A V +S RN+ +N +I G+A G
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSC 410
+A ++ QM+ G KPD T+ + ++ACS G ++ + ME G+KP + Y+
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME-ALGVKPNIKTYTT 804
Query: 411 MIDLLGRTGLLKEA---YELITSMPMQPCEAAWGALLNA 446
+I R L ++A YE + +M ++P +A + LL +
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 142/290 (48%), Gaps = 17/290 (5%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGE-SVHCV 59
++N +I + N + A M + R R+F+ + + SGD V +
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK-SGDMRRSLEVFDM 614
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVV----TWTTMFDGYASRNC 115
+R+ G + NGLI+ ++ ++ A E+ DE +L V T+T + GYAS
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
+ A E F + ++ + T A+L AC + G ++ V + M +N+ + ++N
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734
Query: 176 LLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTP--- 228
L+D + + G + A +L +M+ D+ ++TS ++ +K GD+ A + +++
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 229 -HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE---HALVSVL 274
N+ +++ ++ G+++ + P+++L + EM G+ P++ H L++ L
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 168/410 (40%), Gaps = 57/410 (13%)
Query: 75 LIHFYADRGWLKHAREVFDESSLKDVVT----WTTMFDGYASRNCSELAMELFNLMLRGD 130
++ FY RG + ARE F+ + + +T++ YA + A+ M
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 131 VEPNEVTLIAVLSACSQMGDIEM-------GRRVHEN----------------------- 160
+E + VT ++ S+ G E +R+H+
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 161 -----MEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGY 211
ME++ + + +++ ++D Y +F R++ T V ++ ++N Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 212 AKCGD----LENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
K G LE +R ++ N+ ++S M+ G+ + + +F +M+ G+ P+
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 268 HALVSVLSA-CGQLSCLNLGHWIHQHFVIEKGMH-PSVTLANAILDMYAKCGSIEAAAEV 325
+++SA CG N+ I ++K H P+ I+ YAK G + + EV
Sbjct: 555 ILYNNIISAFCGM---GNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 326 FNAISERNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSH 381
F+ + V ++N +I G Q ++AV + D+M G ++ T+ ++ +
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 382 GGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
G + EYF ++ N G+ Y ++ ++G ++ A + M
Sbjct: 672 VGDTGKAFEYFTRLQ-NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/469 (20%), Positives = 181/469 (38%), Gaps = 65/469 (13%)
Query: 92 FDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDI 151
F++ S + M Y R A E F M + P +++ A + D+
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 152 EMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRM----ETRDVFSWTSM 207
+ M+++ + SL ++ ++ + K G AA FD +T + + +
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 208 VNGYAKCGDLENA----RRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
+ + + ++E A R ++ + + M+ GY+ K+ L +F + G
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 264 VP---EEHALVSVLSACGQLS---------------------------CLNLGHWIHQHF 293
P L+++ + G++S + L W +
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 294 VIE----KGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE----RNLVSWNSMIAGYA 345
V E +GM P V L N I+ + G+++ A + + + ++ +I GYA
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 346 ANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKR 405
+G ++++ VFD MR G P TF L+ + + E M G+
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA-GVSANE 659
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMPMQPCEA---AWGALLNACRMHGNVELA-----R 457
Y+ ++ G +A+E T + + + + ALL AC G ++ A
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 458 LSACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSL---MRDKGVK 503
+SA N+ P +S +Y +L + A + GDV L M+ +GVK
Sbjct: 720 MSARNI----PRNSFVYNILIDGWA---RRGDVWEAADLIQQMKKEGVK 761
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/532 (21%), Positives = 219/532 (41%), Gaps = 89/532 (16%)
Query: 3 NTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRK 62
+ ++ G K R+ +A F M+ + D + +++ EL + + +
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 63 LGFDSELLVRNGLIHFYADRGWLKHA----REVFDESSLKDVVTWTTMFDGYASRNCSEL 118
G D ++ N LI + + A +++ + DVVT+ T+ G E+
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIE-------------------------- 152
+E+ + ML P+E + +++ + G IE
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 153 ---MGRRVHE------NMEKKNMRCSLNLHNALLDMYVKCGSLVAAR----ELFDRMETR 199
GR+ HE M K +R + ++ L+DM+ + G L A E+ D
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 200 DVFSWTSMVNGYAKCGDLENARRFLDQTPHK----NVVSWSAMLAGYSQNNKPKESLKLF 255
V+ + S++NG+ K GD+ A F+ + +K VV++++++ GY K ++L+L+
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 256 HEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAK 315
HEM G G+ P + ++LS + + + E + P+ N +++ Y +
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCE 554
Query: 316 CGSIEAAAEVFNAISERNLV----SWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDIT 371
G + A E ++E+ +V S+ +I G GQA +A D + + ++I
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 372 FVNLLTA-CSHG------------------------GLISEG------QEYFYTMER--- 397
+ LL C G G++ +G ++ F+ + +
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 398 NYGIKPKREHYSCMIDLLGRTGLLKEAY---ELITSMPMQPCEAAWGALLNA 446
+ G+KP Y+ MID +TG KEA+ +L+ + P E + A++N
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 179/419 (42%), Gaps = 62/419 (14%)
Query: 95 SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMG 154
S L +V T + + G LAMELFN M+ + P+ V+ + ++ D+
Sbjct: 187 SLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRA 246
Query: 155 RRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAA----RELFDRMETRDVFSW------ 204
+ + +ME ++ +N L+D K + A ++L + DV ++
Sbjct: 247 KEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYG 306
Query: 205 -----------------------------TSMVNGYAKCGDLENA----RRFLDQTPHKN 231
+S+V G K G +E A +R +D N
Sbjct: 307 LCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE---HALVSVLSACGQL-SCLN-LG 286
+ ++A++ + K E+ LF M G+ P + L+ + G+L + L+ LG
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 287 HWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA----AEVFNAISERNLVSWNSMIA 342
+++ G+ SV N++++ + K G I AA AE+ N E +V++ S++
Sbjct: 427 E------MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 343 GYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIK 402
GY + G+ +A+ ++ +M G P TF LL+ GLI + + F M + +K
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVK 539
Query: 403 PKREHYSCMIDLLGRTGLLKEAYELITSMP---MQPCEAAWGALLNACRMHGNVELARL 458
P R Y+ MI+ G + +A+E + M + P ++ L++ + G A++
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 184/440 (41%), Gaps = 70/440 (15%)
Query: 73 NGLIHFYADRGWLKHAR----EVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLR 128
N LI+ + G + A E+ ++ VVT+T++ GY S+ A+ L++ M
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVA 188
+ P+ T +LS + G I ++ M + N++ + +N +++ Y + G +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 189 ARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK-----NVVSWSAML 239
A E M + D +S+ +++G G A+ F+D HK N + ++ +L
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL-HKGNCELNEICYTGLL 619
Query: 240 AGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHF------ 293
G+ + K +E+L + EM+ GV + L G L +L H + F
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLD-------LVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 294 VIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQ 349
+ ++G+ P + +++D +K G + A +++ + N V++ ++I G G
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 350 AKQAVNVFDQMRCMGFKPDDITFVNLLTACSHG--------------------------- 382
+A + +M+ + P+ +T+ L + G
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 383 --------GLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMP-- 432
G I E E M + G+ P Y+ MI+ L R +K+A EL SM
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGD-GVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 433 -MQPCEAAWGALLNACRMHG 451
++P A+ L++ C + G
Sbjct: 852 GIRPDRVAYNTLIHGCCVAG 871
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 191/466 (40%), Gaps = 52/466 (11%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVF-------------ALKACEELS 48
+N++I G+ K + + A + M+ ++E ++ AL+ E++
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 49 GDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVVTWTTMFD 108
G S++ L L R GLI R +K E+ + + + VT+ M +
Sbjct: 500 GKGIAPSIYTFTTLLSG----LFRAGLI-----RDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 109 GYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRC 168
GY A E M + P+ + ++ G + + + K N C
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN--C 608
Query: 169 SLN--LHNALLDMYVKCGSLVAA----RELFDRMETRDVFSWTSMVNGYAKCGDLENARR 222
LN + LL + + G L A +E+ R D+ + +++G K D +
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 223 FL----DQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACG 278
L D+ + V +++M+ S+ KE+ ++ M+ G VP E +V++
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING-- 726
Query: 279 QLSCLNLGHWIHQHFVIEKGMHPSVTLANAI-----LDMYAKCGSI--EAAAEVFNAISE 331
L ++++ V+ M P ++ N + LD+ K G + + A E+ NAI +
Sbjct: 727 ----LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILK 781
Query: 332 ---RNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG 388
N ++N +I G+ G+ ++A + +M G PD IT+ ++ + +
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 389 QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ 434
E + +M GI+P R Y+ +I G + +A EL M Q
Sbjct: 842 IELWNSMTEK-GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 174/379 (45%), Gaps = 18/379 (4%)
Query: 63 LGFDSELLVRNGLIHFYA----DRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSEL 118
LG + ++ N LI+ YA G + R + + ++VVT+T++ GY + E
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 119 AMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLD 178
A +F L+ + ++ ++ + G I RVH+NM + +R + + N+L++
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 179 MYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNVV- 233
Y K G LV A ++F RM D ++ ++V+GY + G ++ A + DQ K VV
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 434
Query: 234 ---SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIH 290
+++ +L GYS+ + L L+ M+ GV +E + ++L A +L N +
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 291 QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS----ERNLVSWNSMIAGYAA 346
++ V+ +G+ N ++ K + A E+ + ++ + + ++ ++ GY
Sbjct: 495 EN-VLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKRE 406
G K+A V + M G P + L++ +++ + + R G+ P
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL-RARGLTPTVA 612
Query: 407 HYSCMIDLLGRTGLLKEAY 425
Y +I G++ +AY
Sbjct: 613 TYGALITGWCNIGMIDKAY 631
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 169/365 (46%), Gaps = 44/365 (12%)
Query: 75 LIHFYADRGWLKHAREVFDE----SSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGD 130
++ YA++G +K+A VFD + +++ ++ + + +A+ +++ M+ +
Sbjct: 161 ILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFE 220
Query: 131 VEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAAR 190
V P+ T V++A + G+++ + E SL L
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAMVFAKETES-----SLGL------------------ 257
Query: 191 ELFDRMETRDVFSWTSMVNGYAKCGDLENARRFL----DQTPHKNVVSWSAMLAGYSQNN 246
EL +V ++ S++NGYA GD+E R L ++ +NVV++++++ GY +
Sbjct: 258 EL-------NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKG 310
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
+E+ +F + +V ++H ++ + + +H + +IE G+ + T+
Sbjct: 311 LMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDN-MIEIGVRTNTTIC 369
Query: 307 NAILDMYAKCGSIEAAAEVFNAISERNLV----SWNSMIAGYAANGQAKQAVNVFDQMRC 362
N++++ Y K G + A ++F+ +++ +L ++N+++ GY G +A+ + DQM
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
P +T+ LL S G + + M + G+ S +++ L + G
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR-GVNADEISCSTLLEALFKLGDFN 488
Query: 423 EAYEL 427
EA +L
Sbjct: 489 EAMKL 493
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 50/264 (18%)
Query: 181 VKCGSLVAARELFDRM----ETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHK-----N 231
V+ G A ++D+M + DVF+ + +VN Y + G+++ A F +T N
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 232 VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQ 291
VV++++++ GY+ M+G + + VL
Sbjct: 261 VVTYNSLINGYA--------------MIG-----DVEGMTRVL----------------- 284
Query: 292 HFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNLVS----WNSMIAGYAAN 347
+ E+G+ +V +++ Y K G +E A VF + E+ LV+ + ++ GY
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRT 344
Query: 348 GQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREH 407
GQ + AV V D M +G + + +L+ G + E ++ F M ++ +KP
Sbjct: 345 GQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN-DWSLKPDHHT 403
Query: 408 YSCMIDLLGRTGLLKEAYELITSM 431
Y+ ++D R G + EA +L M
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQM 427
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/517 (20%), Positives = 194/517 (37%), Gaps = 118/517 (22%)
Query: 73 NGLIHFYADRGWLKHAREVFDESSLKDVV----TWTTMFDGYASRNCSELAMELFNLMLR 128
N L+ Y G++ A ++ D+ K+VV T+ + GY+ + L+ +ML+
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 129 GDVEPNEVTLIAVLSACSQMGDIEMGRRVHEN----------------------MEKKN- 165
V +E++ +L A ++GD ++ EN MEK N
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 166 ----------MRC--SLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYA- 212
RC ++ + AL Y K G+L A + + ME + +F M N
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 213 ---------KCGDLENARRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGV 263
K DL R TP V ++ A++ G+ ++ EM+ G+
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTP--TVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Query: 264 ------------------------------------VPEEHALVSVLSACGQLSCLNLGH 287
+P +L L A +CL
Sbjct: 643 TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASAT-TCLKTQK 701
Query: 288 WIH--QHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI--SERNL---VSWNSM 340
++ +K + P+ + N + K G +E A ++F+ + S+R + ++ +
Sbjct: 702 IAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTIL 761
Query: 341 IAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYG 400
I G A G +A + D+M G P+ +T+ L+ G + Q + + + G
Sbjct: 762 IHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK-G 820
Query: 401 IKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSA 460
I P Y+ +ID L ++G + EA L M + L+ G+V++ +
Sbjct: 821 ITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK-------GLVRGSDKQGDVDIPK--- 870
Query: 461 CNLLSLDPE----DSGIYVLLANICANERKWGDVKRV 493
+ LDPE +G+ I N + DV+RV
Sbjct: 871 --EVVLDPEVKLGSTGV------IEMNSNELYDVRRV 899
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 117/518 (22%), Positives = 209/518 (40%), Gaps = 50/518 (9%)
Query: 56 VHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVF---DESSLK-DVVTWTTMFDGYA 111
VH + ++G + + N LI+ Y G L A ++F ++ SLK D T+ T+ DGY
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYC 412
Query: 112 SRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLN 171
+ A++L + M + +V P +T +L S++G + + M K+ +
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 172 LHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQT 227
+ LL+ K G A +L++ + R D + M++G K + A+ LD
Sbjct: 473 SCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Query: 228 P----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL 283
V ++ A+ GY + KE+ + M G+ P +++S + L
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592
Query: 284 NLGHWIHQHFVIE---KGMHPSVTLANAILDMYAKCGSIEAA-AEVFNAISERNLVSWNS 339
N VIE +G+ P+V A++ + G I+ A A F I + ++ N
Sbjct: 593 NK----VADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG--ITLNV 646
Query: 340 MIAGYAANGQAK-----------QAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEG 388
I AN + Q + FD + G++ T C I+E
Sbjct: 647 NICSKIANSLFRLDKIDEACLLLQKIVDFDLL-LPGYQSLKEFLEASATTCLKTQKIAES 705
Query: 389 QEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAY----ELITSMPMQPCEAAWGALL 444
E + + P Y+ I L + G L++A +L++S P E + L+
Sbjct: 706 VENSTPKKL---LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 445 NACRMHGNVELARL--SACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGV 502
+ C + G++ A L + P L+ +C K G+V R + L+
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLC----KLGNVDRAQRLLHKLPQ 818
Query: 503 KKIPGHSLVE---VDGEFKEFLVADESHPQSEEIYKVL 537
K I +++ +DG K VA+ + + I K L
Sbjct: 819 KGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
K +E+L++ + G + + L+ + CG++ L +H
Sbjct: 92 KIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARS-----Y 146
Query: 307 NAILDMYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFK 366
+ +++MY+ C S + A VFN + +RN +W +MI A NG+ ++A+++F + G K
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 367 PDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYE 426
PD F + AC G I+EG +F +M R+YG+ E Y +I++L G L EA +
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 427 LITSMPMQPCEAAWGALLNACRMHGNVELA 456
+ M ++P W L+N C + G +EL
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELG 296
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 176 LLDMYVKCGSLVA---ARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTPHKNV 232
LL + CG + A AR + D + D S+ +++ Y+ C ++A ++ P +N
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNS 174
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
+W M+ ++N + + ++ +F + G P++ +V AC + +N G +
Sbjct: 175 ETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFES 234
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS-ERNLVSWNSMI 341
+ GM S+ +++M A CG ++ A + ++ E ++ W +++
Sbjct: 235 MYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 11/182 (6%)
Query: 42 KACEELSGDFEGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKDVV 101
K C E+ E VH + L S + +I Y+ A VF+E ++
Sbjct: 120 KLCGEVEALEEARVVHDCITPLDARS----YHTVIEMYSGCRSTDDALNVFNEMPKRNSE 175
Query: 102 TWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENM 161
TW TM A E A+++F + +P++ AV AC +GDI G E+M
Sbjct: 176 TWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESM 235
Query: 162 EKK-NMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR-DVFSWTSMVN-----GYAKC 214
+ M S+ + +++M CG L A + +RM V W +++N GY +
Sbjct: 236 YRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLEL 295
Query: 215 GD 216
GD
Sbjct: 296 GD 297
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 188/411 (45%), Gaps = 28/411 (6%)
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
E+A L +L+L PN VT +++ + G+++ + + ME++ + L ++ L
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 177 LDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENA----RRFLDQTP 228
+D Y K G L +LF + + DV ++S ++ Y K GDL A +R L Q
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 229 HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHW 288
NVV+++ ++ G Q+ + E+ ++ +++ G+ P S++ + L G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 289 IHQHFVIEKGMHPSVTLANAILDMYAKCG----SIEAAAEVFNAISERNLVSWNSMIAGY 344
+++ +I+ G P V + ++D +K G ++ + ++ N+V +NS+I G+
Sbjct: 448 LYED-MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA-------CSHGGLISEGQEYFYTMER 397
+ +A+ VF M G KPD TF ++ C H + G + F M+R
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLFDLMQR 565
Query: 398 NYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM---PMQPCEAAWGALL-NACRMHGNV 453
N I + +I LL + +++A + ++ M+P + ++ C +
Sbjct: 566 N-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 454 ELARL-SACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVK 503
E R+ + P + +L+ +C N G + R+ S+M +KG K
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI-RMFSIMAEKGSK 674
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 203/474 (42%), Gaps = 54/474 (11%)
Query: 4 TMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKL 63
T+I G+ K + AF F M + +E D ++ + + G +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 64 GFDSELLVRNGLIHFYADRGWLKHAREVFD----ESSLKDVVTWTTMFDGYASRNCSELA 119
G +++V + I Y G L A V+ + +VVT+T + G A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 120 MELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDM 179
++ +L+ +EP+ VT +++ + G++ G ++E+M K
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY------------- 457
Query: 180 YVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRF----LDQTPHKNVVSW 235
DV + +V+G +K G + +A RF L Q+ NVV +
Sbjct: 458 ------------------PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 236 SAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVL--SACGQLSCLNLGHWIH-QH 292
++++ G+ + N+ E+LK+F M G+ P+ +V+ S C ++ I Q
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 293 FVI--EKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI----SERNLVSWNSMIAGYAA 346
F + + + + N ++ + KC IE A++ FN + E ++V++N+MI GY +
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLL-TACSHGGLISEGQEYFYTMERNYGIKPKR 405
+ +A +F+ ++ F P+ +T L+ C + + +G +++ G KP
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM--DGAIRMFSIMAEKGSKPNA 677
Query: 406 EHYSCMIDLLGRTGLLKEAYELITSMP---MQPCEAAWGALLNACRMHGNVELA 456
Y C++D ++ ++ +++L M + P ++ +++ G V+ A
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 157/344 (45%), Gaps = 49/344 (14%)
Query: 62 KLGFDSELLVRNGLIHFYADRGWLKHAR----EVFDESSLKDVVTWTTMFDGYASRNCSE 117
K+G+ ++++ L+ + +G + HA ++ +S +VV + ++ DG+ N +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSA-------CSQMGDIEMGRRVHENMEKKNMRCSL 170
A+++F LM ++P+ T V+ C M +G ++ + M++ + +
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADI 572
Query: 171 NLHNALLDMYVKCGSLVAARELFD-----RMETRDVFSWTSMVNGYAKCGDLENARR--- 222
+ N ++ + KC + A + F+ +ME D+ ++ +M+ GY L+ A R
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-DIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 223 FLDQTPH-KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLS 281
L TP N V+ + ++ +NN ++++F M G P +V C
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN-----AVTYGC---- 682
Query: 282 CLNLGHWIHQHFVIE-----------KGMHPSVTLANAILDMYAKCGSIEAAAEVFN-AI 329
L W + IE KG+ PS+ + I+D K G ++ A +F+ AI
Sbjct: 683 ---LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 330 SER---NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
+ ++V++ +I GY G+ +A +++ M G KPDD+
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 134/286 (46%), Gaps = 20/286 (6%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKA-------CEELSGDFEG 53
++N++I G+ + + A F M + ++ D +F ++ C+ + G
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI-G 556
Query: 54 ESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFD---ESSLK-DVVTWTTMFDG 109
+ ++++ +++ V N +IH ++ A + F+ E ++ D+VT+ TM G
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 110 YASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS 169
Y S + A +F L+ PN VTL ++ + D++ R+ M +K + +
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRF-- 223
+ L+D + K + + +LF+ M+ + + S++ +++G K G ++ A
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
Query: 224 --LDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE 267
+D +VV+++ ++ GY + + E+ L+ M+ GV P++
Sbjct: 737 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 195/438 (44%), Gaps = 32/438 (7%)
Query: 117 ELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNAL 176
++A LF+ M + + P+ T ++++ + G + + ME+ + L L++ L
Sbjct: 172 DIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNL 231
Query: 177 LDMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENARRFLDQTPH--- 229
+++ + A +F R++ T D+ ++ SM+N Y K AR + +
Sbjct: 232 IELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGV 291
Query: 230 -KNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLG-- 286
N VS+S +L+ Y +N+K E+L +F EM + ++ GQL +
Sbjct: 292 LPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADR 351
Query: 287 -HWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS----ERNLVSWNSMI 341
W + IE P+V N IL +Y + A +F + E+N+V++N+MI
Sbjct: 352 LFWSLRKMDIE----PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 342 AGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGI 401
Y + ++A N+ +M+ G +P+ IT+ +++ G + F + R+ G+
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL-RSSGV 466
Query: 402 KPKREHYSCMIDLLGRTGLLKEAYELITSMPMQ---PCEAAWGALLNACRMHGNVELARL 458
+ + Y MI R GL+ A L+ + + P E A L A R + R
Sbjct: 467 EIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQ 526
Query: 459 SACNLLSLDPEDSGIYVLLANICANERKWGDVKRVRSLMRDKGVKKIPGHSLVEV----D 514
+ S + +D ++ + N+ + +++ +V V MR G P +++ +
Sbjct: 527 A---FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGY--FPDSNVIAMVLNAY 581
Query: 515 GEFKEFLVADESHPQSEE 532
G+ +EF AD + + +E
Sbjct: 582 GKQREFEKADTVYREMQE 599
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 135/329 (41%), Gaps = 14/329 (4%)
Query: 52 EGESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKD----VVTWTTMF 107
E + + +RK+ + ++ N ++ Y + A +F KD VVT+ TM
Sbjct: 348 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 108 DGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMR 167
Y E A L M +EPN +T ++S + G ++ + + + +
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 168 CSLNLHNALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENA----RRF 223
L+ ++ Y + G + A+ L ++ D + + AK G E A R+
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 224 LDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCL 283
+ K++ + M+ YS+N + +++F +M AG P+ + + VL+A G+
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 284 NLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAI-SERNLVSWN---S 339
+++ E + P + +L +Y+ E +F + S+ N+ S
Sbjct: 588 EKADTVYREMQEEGCVFPD-EVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLV 646
Query: 340 MIAGYAANGQAKQAVNVFDQMRCMG-FKP 367
+ A Y + A V ++MR G KP
Sbjct: 647 VAALYERADKLNDASRVMNRMRERGILKP 675
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 173/454 (38%), Gaps = 79/454 (17%)
Query: 99 DVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVH 158
D+V + +M + Y A L M V PN V+ +LS + V
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Query: 159 ENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETRD----VFSWTSMVNGYAKC 214
M++ N L N ++D+Y + + A LF + D V S+ +++ Y +
Sbjct: 319 AEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA 378
Query: 215 ---GDLENARRFLDQTP-HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE--- 267
G+ + R + + +NVV+++ M+ Y + + +++ L EM G+ P
Sbjct: 379 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITY 438
Query: 268 HALVSVLSACGQL------------SCLNLGHWIHQHFVI-----------EKGMH---- 300
++S+ G+L S + + ++Q ++ ++ +H
Sbjct: 439 STIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL 498
Query: 301 PSVTLANAILDMYAKCGSIEAAAEVFNAISE----RNLVSWNSMIAGYAANGQAKQAVNV 356
P + + AK G E A VF E +++ + MI Y+ N + + V
Sbjct: 499 PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEV 558
Query: 357 FDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLG 416
F++MR G+ PD +L A + + M+ + P H+ M+ L
Sbjct: 559 FEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYS 617
Query: 417 RTGLLKEAYELITSMPMQPCEAAWGALLNACRMHGNVELARLSACNLLSLDP--EDSGIY 474
K+ +E++ S+ RL + DP ++
Sbjct: 618 S----KKDFEMVESL-----------------------FQRLES------DPNVNSKELH 644
Query: 475 VLLANICANERKWGDVKRVRSLMRDKGV-KKIPG 507
+++A + K D RV + MR++G+ K PG
Sbjct: 645 LVVAALYERADKLNDASRVMNRMRERGILKPFPG 678
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 161/361 (44%), Gaps = 54/361 (14%)
Query: 122 LFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNL--HNALLDM 179
++ M+R ++PN T V++A + G + R V E+M K CS N+ +N L+D
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM--KVYGCSPNVVSYNTLIDG 267
Query: 180 YVKCG------------------------------------------SLVAARELFDRME 197
Y K G S+ +E+ D+
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 198 TRDVFSWTSMVNGYAKCGDLENARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLK 253
+V S+ S++NG G + A D+ N+++++A++ G+ +N+ KE+L
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 254 LFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMY 313
+F + G G VP ++ A +L ++ G + + E G+ P V N ++
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE-GIVPDVGTYNCLIAGL 446
Query: 314 AKCGSIEAAAEVFNAISER---NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDI 370
+ G+IEAA ++F+ ++ + +LV+++ ++ GY G++++A + +M MG KP +
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 371 TFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITS 430
T+ ++ G + ME+ ++ Y+ ++ + G L++A L+
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566
Query: 431 M 431
M
Sbjct: 567 M 567
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 171/388 (44%), Gaps = 23/388 (5%)
Query: 5 MIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLG 64
MI ++ R+ ++ + Y M+R +++ + +F + A + + V ++ G
Sbjct: 195 MIALLKENRSADVEYVY-KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 65 FDSELLVRNGLIHFY---ADRGWLKHAREVFDESSLKDV----VTWTTMFDGYASRNCSE 117
++ N LI Y G + A V E DV T+ + DG+ +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 118 LAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALL 177
+M++F ML DV+PN ++ ++++ G I + + M ++ +L +NAL+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 178 DMYVKCGSLVAARELFDRMETRDVFSWTSMVN----GYAKCGDLENARRFLDQTPHKNVV 233
+ + K L A ++F ++ + T M N Y K G +++ ++ + +V
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 234 ----SWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWI 289
+++ ++AG +N + + KLF ++ G+ + + C + +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 290 HQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISER-----NLVSWNSMIAGY 344
+ + + G+ P N ++ Y K G+++AA + + + N+ S+N ++ GY
Sbjct: 494 KE--MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 345 AANGQAKQAVNVFDQMRCMGFKPDDITF 372
+ G+ + A + ++M G P+ IT+
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 124/279 (44%), Gaps = 45/279 (16%)
Query: 190 RELFDRMETRDVFSWTSMVNGYAKCGDLENARRFLDQTP----HKNVVSWSAMLAGYSQN 245
+E+ R +VF++ ++N K G + AR ++ NVVS++ ++ GY +
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK- 270
Query: 246 NKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTL 305
+ G G + + A++ + +E + P++T
Sbjct: 271 ------------LGGNGKMYKADAVLKEM--------------------VENDVSPNLTT 298
Query: 306 ANAILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMR 361
N ++D + K ++ + +VF + ++ N++S+NS+I G G+ +A+++ D+M
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 362 CMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLL 421
G +P+ IT+ L+ ++ E + F ++ + G P Y+ +ID + G +
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSV-KGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 422 KEAYELITSMPMQ---PCEAAWGALLNACRMHGNVELAR 457
+ + L M + P + L+ +GN+E A+
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 152/327 (46%), Gaps = 17/327 (5%)
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHA----REVFDESSLKDVVTWTTMFDGYASRNC 115
V++ G + ++ LI Y +G + A E+ + DVVT+ T+ G R
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
A +LFN M + P+ TL ++ ++G+++ + + M++K +R + +N
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 176 LLDMYVKCGSLVAARELFDRMETRDVF----SWTSMVNGYAKCGDLENARRFLDQTPHKN 231
LLD + K G + A+E++ M ++++ S++ +VN G L A R D+ KN
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 232 ----VVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
V+ ++M+ GY ++ + +M+ G VP+ + +++ + ++
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 288 WIHQHFVIEK-GMHPSVTLANAILDMYAKCGSIEAAAEVFNAISERNL----VSWNSMIA 342
+ + E+ G+ P V N+IL + + ++ A V + ER + ++ MI
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 343 GYAANGQAKQAVNVFDQMRCMGFKPDD 369
G+ + +A + D+M GF PDD
Sbjct: 701 GFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 186/442 (42%), Gaps = 56/442 (12%)
Query: 60 VRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLKD----VVTWTTMFDGYASRNC 115
V++ G +++ N LI Y+ +G ++ A E+ + K V T+ T+ +G
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 116 SELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNA 175
E A E+F MLR + P+ T ++L + GD+ +V +M +++ L ++
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 176 LLDMYVKCGSLVAARELFDRME----TRDVFSWTSMVNGYAKCGDLENA----RRFLDQT 227
++ ++ + G+L A F+ ++ D +T ++ GY + G + A L Q
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 228 PHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGH 287
+VV+++ +L G + E+ KLF+EM + P+ + L ++ +L L
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 288 WIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVF----------NAISERNLVS- 336
+ Q + EK + V N +LD + K G I+ A E++ IS LV+
Sbjct: 501 ELFQK-MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 337 -------------W---------------NSMIAGYAANGQAKQAVNVFDQMRCMGFKPD 368
W NSMI GY +G A + ++M GF PD
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 369 DITFVNLLTACSHGGLISEGQEYFYTMERNY-GIKPKREHYSCMIDLLGRTGLLKEAYEL 427
I++ L+ +S+ ME G+ P Y+ ++ R +KEA +
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 428 ITSM---PMQPCEAAWGALLNA 446
+ M + P + + ++N
Sbjct: 680 LRKMIERGVNPDRSTYTCMING 701
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/489 (20%), Positives = 195/489 (39%), Gaps = 67/489 (13%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFE-------G 53
+++ +IR Y +AR A F +LR + F ++ AC L G
Sbjct: 167 VFDLLIRTYVQARKLREAHEAF-TLLRSK------GFTVSIDACNALIGSLVRIGWVELA 219
Query: 54 ESVHCVVRKLGFDSELLVRNGLIHFYADRGWLKHA----REVFDESSLKDVVTWTTMFDG 109
V+ + + G + N +++ G ++ +V ++ D+VT+ T+
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 110 YASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS 169
Y+S+ E A EL N M P T V++ + G E + V M + +
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETRDVFS----WTSMVNGYAKCGDLENARRF-- 223
+ +LL K G +V ++F M +RDV ++SM++ + + G+L+ A +
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 224 -------------------------------------LDQTPHKNVVSWSAMLAGYSQNN 246
L Q +VV+++ +L G +
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 247 KPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLA 306
E+ KLF+EM + P+ + L ++ +L L + Q + EK + V
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK-MKEKRIRLDVVTY 518
Query: 307 NAILDMYAKCGSIEAAAEVFNAISERNL----VSWNSMIAGYAANGQAKQAVNVFDQMRC 362
N +LD + K G I+ A E++ + + + +S++ ++ + G +A V+D+M
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 363 MGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLK 422
KP + +++ G S+G+ + M G P Y+ +I R +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMS 637
Query: 423 EAYELITSM 431
+A+ L+ M
Sbjct: 638 KAFGLVKKM 646
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 168/413 (40%), Gaps = 79/413 (19%)
Query: 97 LKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRR 156
+ V+T+ TM D E +++ M R ++E +EVT +++ S+ G +E RR
Sbjct: 235 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 157 VHENMEKKNMRCSLNLHNALLDMYVK---------------------------------- 182
H +M + + N L++ Y K
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 183 -CGSLVAARELFDRMETRDVFSWTSMVNGYAK---------------------------- 213
G + AREL M DV S+ ++++GY K
Sbjct: 355 DFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 214 -------CGDLENARRFLD----QTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAG 262
G+LE A+R + Q +V++++ ++ G+ +N + +++ EM+ G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 263 VVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAA 322
+ P+ +A + +L + +H+ V P +T+ N +D K G++ A
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 323 AEVFNAISERNL----VSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
E I L V++ ++I GY NGQ K A N++D+M P IT+ L+
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 379 CSHGGLISEGQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSM 431
+ G + + +Y M++ G++P ++ ++ + + G + EAY + M
Sbjct: 595 HAKAGRLEQAFQYSTEMKKR-GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 148/341 (43%), Gaps = 42/341 (12%)
Query: 81 DRGWLKHAREVFDESSLKDVVTWTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIA 140
D G + ARE+ + DVV++ T+ GY A LF+ + GD+ P+ VT
Sbjct: 355 DFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 141 VLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMETR- 199
++ + G++E +R+ E M + + + + L+ +VK G+L A E++D M +
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 200 ---DVFSWTSMVNGYAKCGDLENARRFLDQ---TPH--KNVVSWSAMLAGYSQNNKPKES 251
D +++T+ G + GD + A R ++ T H ++ ++ + G + ++
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 252 LKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILD 311
++ ++ G+VP+ +V+ + + ++ ++ K ++PSV
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE-MLRKRLYPSV-------- 585
Query: 312 MYAKCGSIEAAAEVFNAISERNLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDIT 371
+++ +I G+A G+ +QA +M+ G +P+ +T
Sbjct: 586 -----------------------ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 372 FVNLLTACSHGGLISEGQEYFYTMERNYGIKPKREHYSCMI 412
LL G I E Y ME GI P + Y+ +I
Sbjct: 623 HNALLYGMCKAGNIDEAYRYLCKMEEE-GIPPNKYSYTMLI 662
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 166/401 (41%), Gaps = 61/401 (15%)
Query: 110 YASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCS 169
Y ++ +E + F M+R P+ VL + V+E M + + +
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 170 LNLHNALLDMYVKCGSLVAARELFDRMETRDV----FSWTSMVNGYAKCGDLENARRF-- 223
+ N +LD K G L +++ M+ R++ ++ ++NG++K G +E ARRF
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 224 ------LDQTPHKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVP------------ 265
TP+ S++ ++ GY + ++ + EM+ AG+ P
Sbjct: 298 DMRRSGFAVTPY----SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 266 -------EEHALVSVLSACGQLSCLNLGH-WIHQHFVIEKGM----------HPSVTLAN 307
+ L+S ++A +S L H +I +E + HPS+ N
Sbjct: 354 CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 308 AILDMYAKCGSIEAAAEVFNAISER----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCM 363
++D + G++E A + ++ + +++++ +++ G+ NG A V+D+M
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 364 GFKPDDITFVNLLTACSHGGL-ISEGQEYFYTMERNYGIK---PKREHYSCMIDLLGRTG 419
G KPD + T + G L + + + F E P Y+ ID L + G
Sbjct: 474 GIKPDGYAY----TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Query: 420 LLKEAYEL---ITSMPMQPCEAAWGALLNACRMHGNVELAR 457
L +A E I + + P + ++ +G ++AR
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 2 WNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVR 61
+ T+++G+ K N ++A + MLR ++ D + + +A EL ++
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD--GYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 62 KLGFD---SELLVRNGLIHFYADRGWLKHA----REVFDESSLKDVVTWTTMFDGYASRN 114
+ D +L + N I G L A R++F + D VT+TT+ GY
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
++A L++ MLR + P+ +T ++ ++ G +E + M+K+ +R ++ HN
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 175 ALLDMYVKCGSLVAARELFDRMETRDVFSWTSMVNGYAKCGDLENARRFL----DQTPHK 230
ALL G K G+++ A R+L ++
Sbjct: 625 ALL-------------------------------YGMCKAGNIDEAYRYLCKMEEEGIPP 653
Query: 231 NVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHA 269
N S++ +++ K +E +KL+ EM+ + P+ +
Sbjct: 654 NKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 174/392 (44%), Gaps = 36/392 (9%)
Query: 11 KARNPNIAFSYFLRMLRHRVEMDCRSFVFALKACEELSGDFEGESVHCVVRKLGFDSELL 70
K++N ++ S F M + D S+ + S SV + K G++ +++
Sbjct: 81 KSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140
Query: 71 VRNGLIHFYADRGWLKHAREVFDESSL----------KDVVTWTTMFDGYASRNCSELAM 120
+ LI+ + VFD L DVV + T+ DG A+
Sbjct: 141 TVSSLINGFC------QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 121 ELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHNALLDMY 180
ELF+ M R V + VT ++++ G R+ +M +++ ++ A++D++
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 181 VKCGSLVAARELFDRMETR----DVFSWTSMVNGYAKCGDLENARRFLDQTPHK----NV 232
VK G A +L++ M R DVF++ S++NG G ++ A++ LD K +V
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 233 VSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQH 292
V+++ ++ G+ ++ + E KLF EM G+V + +++ Q + I
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 293 FVIEKGMHPSVTLANAILDMYAKCGS--IEAAAEVFNAIS----ERNLVSWNSMIAGYAA 346
P++ + +L Y C + +E A +F + E ++ ++N +I G
Sbjct: 375 M----DSRPNIRTYSILL--YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 347 NGQAKQAVNVFDQMRCMGFKPDDITFVNLLTA 378
G + A ++F + C G KPD +++ +++
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 163/369 (44%), Gaps = 20/369 (5%)
Query: 103 WTTMFDGYASRNCSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENME 162
W F S E ++LF M++ P+ V VLS ++ + ++ + +ME
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 163 KKNMRCSLNLHNALLDMYVKCGSLVAARELFDRMET----RDVFSWTSMVNGYAKCGDLE 218
+ L +N +++ +C V A + +M DV + +S++NG+ + +
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 219 NARRFLDQTP----HKNVVSWSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEE---HALV 271
+A + + +VV ++ ++ G + ++++LF M GV + ++LV
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 272 SVLSACGQLSCLNLGHWIHQHFVIEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAISE 331
+ L G+ S + + ++ + + P+V A++D++ K G A +++ ++
Sbjct: 217 AGLCCSGRWS--DAARLMRD--MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 332 R----NLVSWNSMIAGYAANGQAKQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISE 387
R ++ ++NS+I G +G+ +A + D M G PD +T+ L+ + E
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 388 GQEYFYTMERNYGIKPKREHYSCMIDLLGRTGLLKEAYELITSMPMQPCEAAWGALLNAC 447
G + F M + G+ Y+ +I + G A E+ + M +P + LL
Sbjct: 333 GTKLFREMAQR-GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Query: 448 RMHGNVELA 456
M+ VE A
Sbjct: 392 CMNWRVEKA 400
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 131/311 (42%), Gaps = 48/311 (15%)
Query: 1 MWNTMIRGYRKARNPNIAFSYFLRMLRHRVEMDCRSF--VFALKACEELSGDFEGESVHC 58
++NT+I G K N A F RM R V D ++ + A C D
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 59 VVRKLGFDSELLVRNGLIHFYADRGWLKHAREVFDESSLK----DVVTWTTMFDGYASRN 114
V+R + ++ +I + G A ++++E + + DV T+ ++ +G
Sbjct: 236 VMRDIV--PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 115 CSELAMELFNLMLRGDVEPNEVTLIAVLSACSQMGDIEMGRRVHENMEKKNMRCSLNLHN 174
+ A ++ +LM+ P+ VT +++ + ++ G ++ M ++ + +N
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 175 ALLDMYVKCGSLVAARELFDRMETR----------------------------------- 199
++ Y + G AA+E+F RM++R
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413
Query: 200 -DVFSWTSMVNGYAKCGDLENA----RRFLDQTPHKNVVSWSAMLAGYSQNNKPKESLKL 254
D+ ++ +++G K G++E+A R + +VVS++ M++G+ + + +S L
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473
Query: 255 FHEMMGAGVVP 265
+ +M G++P
Sbjct: 474 YRKMQEDGLLP 484
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 104/264 (39%), Gaps = 42/264 (15%)
Query: 235 WSAMLAGYSQNNKPKESLKLFHEMMGAGVVPEEHALVSVLSACGQLSCLNLGHWIHQHFV 294
W + + +E + LF +M+ + +P VLS + +L + H
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 295 IEKGMHPSVTLANAILDMYAKCGSIEAAAEVFNAIS----ERNLVSWNSMIAGYAANGQA 350
+ G+ + N +++ +C A V + E ++V+ +S+I G+ +
Sbjct: 97 V-CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 351 KQAVNVFDQMRCMGFKPDDITFVNLLTACSHGGLISEGQEYFYTMERN------------ 398
A+++ +M MGF+PD + + ++ GL+++ E F MER+
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 399 ----------------------YGIKPKREHYSCMIDLLGRTGLLKEA---YELITSMPM 433
I P ++ +ID+ + G EA YE +T +
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275
Query: 434 QPCEAAWGALLNACRMHGNVELAR 457
P + +L+N MHG V+ A+
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAK 299