Miyakogusa Predicted Gene

Lj1g3v4372210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4372210.1 Non Chatacterized Hit- tr|I1JFZ5|I1JFZ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37682 PE,75,6e-17,
,TC66652.path1.1
         (183 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41960.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   111   3e-25
AT3G58050.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    90   9e-19

>AT2G41960.1 | Symbols:  | unknown protein; BEST Arabidopsis thaliana
            protein match is: unknown protein (TAIR:AT3G58050.1); Has
            11991 Blast hits to 7260 proteins in 458 species: Archae
            - 17; Bacteria - 481; Metazoa - 5028; Fungi - 1325;
            Plants - 615; Viruses - 38; Other Eukaryotes - 4487
            (source: NCBI BLink). | chr2:17514244-17519015 REVERSE
            LENGTH=1215
          Length = 1215

 Score =  111 bits (277), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 94/188 (50%), Gaps = 21/188 (11%)

Query: 1    MSFPHPNHYLYAGPLGY----EDPRFCLHYGA--LQQPAPLFTPA-VPVYQPVPRANVLN 53
            M FPHPNHY+Y GPLGY    E P  C+ YG       AP F    VP++ P    N +N
Sbjct: 1038 MQFPHPNHYVYTGPLGYSLNGESP-LCMQYGTPLNHSAAPFFNSGPVPIFHPFAETNTMN 1096

Query: 54   AEEWTRASKIPSLQQHHTGSIAESTVPAGTNAKIPAFNGEVKRDSSAMSQENNSDFSLFH 113
              +  +A  +  L+        E         ++P      KR     S EN   FSLFH
Sbjct: 1097 TVD--QAQPLEPLEHSFLKEANERRF-----NEMPLMETPRKRCPQTDSDEN---FSLFH 1146

Query: 114  FGGPVALSTGCKSTLASSNGGTIGDFRTKSSEDHVESVHTCN---KKETTTMEEYNLFAA 170
            FGGPVALSTG K+  A S  G + DF  + S DHV    T N   +KE T  EEYNLFA 
Sbjct: 1147 FGGPVALSTGSKANPARSKDGILEDFSLQFSGDHVFGDPTGNSKKEKENTVGEEYNLFAT 1206

Query: 171  SNNLRLSF 178
            SN+LR S 
Sbjct: 1207 SNSLRFSI 1214


>AT3G58050.1 | Symbols:  | unknown protein; BEST Arabidopsis thaliana
            protein match is: unknown protein (TAIR:AT2G41960.1); Has
            13384 Blast hits to 8116 proteins in 546 species: Archae
            - 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431;
            Plants - 589; Viruses - 46; Other Eukaryotes - 4915
            (source: NCBI BLink). | chr3:21492539-21497018 FORWARD
            LENGTH=1209
          Length = 1209

 Score = 89.7 bits (221), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 83/182 (45%), Gaps = 44/182 (24%)

Query: 3    FPHPNHYLYAGPLGYE---DPRFCLHYGA-LQQPA-PLFTPA-VPVYQPVPRANVLNAEE 56
            FPHPN YLY GPLGY    DP  CL YG+ L   A P F P  VPV+ P  + N  +  +
Sbjct: 1065 FPHPNPYLYTGPLGYSMNGDPPLCLQYGSPLNHAATPFFNPGPVPVFHPFSKTNTEDQAQ 1124

Query: 57   WTRASKIPSLQQHHTGSIAESTVPAGTNAKIPAFNGEVKRDSSAMSQENNSDFSLFHFGG 116
                    +L+            P   N   P     V  DS          FSLFHF G
Sbjct: 1125 --------NLEP-----------PLELNCLAPPETQTVNEDS----------FSLFHFSG 1155

Query: 117  PVALSTGCKSTLASSNGGTIGDFRTKSSEDHVESVHTCNKKETTTMEEYNLFAASNNLRL 176
            PV LSTG KS  A S  G + D         V +++T   KE+  +EEYNLFA  N LR 
Sbjct: 1156 PVGLSTGSKSKPAHSKDGILRDV--------VGNIYT-KAKESKEVEEYNLFATGNGLRF 1206

Query: 177  SF 178
            S 
Sbjct: 1207 SL 1208