Miyakogusa Predicted Gene

Lj1g3v4361120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4361120.1 Non Chatacterized Hit- tr|C3X6X1|C3X6X1_OXAFO
Putative 3-methyladenine DNA glycosylase
OS=Oxalobacte,39.82,0.0000000000001,3mg: DNA-3-methyladenine
glycosylase,Methylpurine-DNA glycosylase (MPG); no
description,Methylpurine,CUFF.32297.1
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12040.1 | Symbols:  | DNA-3-methyladenine glycosylase (MAG) ...   210   2e-55

>AT3G12040.1 | Symbols:  | DNA-3-methyladenine glycosylase (MAG) |
           chr3:3835349-3836781 REVERSE LENGTH=254
          Length = 254

 Score =  210 bits (535), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 99/122 (81%), Positives = 112/122 (91%), Gaps = 1/122 (0%)

Query: 1   MMLNIVADKGGAGAAVLIRSCAPISGLDVIQQRRGQKTDKPILLTGPGKVGQALGLSTEW 60
           MMLNIVADK G GAAVLIRSC+P+SG++ IQ+RRG KTDKP+LL GPGKVGQALGLSTEW
Sbjct: 132 MMLNIVADKEGVGAAVLIRSCSPVSGMETIQERRGLKTDKPVLLNGPGKVGQALGLSTEW 191

Query: 61  SNHPLYTPGGLELLDGPEP-ENILVGPRVGIQYALPEHVNALWRFAIADTPWISAPRNTL 119
           S+HPLY+PGGLELLDG E  E ++VGPRVGI YALPEHVNALWRFA+ADTPWISAP+NTL
Sbjct: 192 SHHPLYSPGGLELLDGGEDVEKVMVGPRVGIDYALPEHVNALWRFAVADTPWISAPKNTL 251

Query: 120 RP 121
           +P
Sbjct: 252 KP 253