Miyakogusa Predicted Gene

Lj1g3v4317700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4317700.1 Non Chatacterized Hit- tr|I1L2M1|I1L2M1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,51.06,0.00000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.32262.1
         (143 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42110.1 | Symbols:  | unknown protein; Has 27 Blast hits to ...   105   7e-24

>AT2G42110.1 | Symbols:  | unknown protein; Has 27 Blast hits to 27
           proteins in 11 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr2:17562234-17562732 REVERSE LENGTH=137
          Length = 137

 Score =  105 bits (263), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 85/127 (66%), Gaps = 6/127 (4%)

Query: 21  AKVQHVTKKSSDELLRKFAEADSDGSGQKKDLLRVAKRQKKMKRDHQCD-NSSSTAVVER 79
            K+ HV KKSSDELLRKFA+ D D     K   R  K  K   R+   D  S+++ +VER
Sbjct: 13  TKITHVNKKSSDELLRKFADPD-DVDESSKSTKRRKKSAKSSSREKGVDIESNTSGLVER 71

Query: 80  -RSLLPPVVTRRSVLLRQLRA--RDVRNRSSLLGTIHKTWRRTVEGASRVFMEKHYHRHK 136
            R LL P   RRS+ +RQL +    +RN+S L+ TI KTWR+T+EGASRVF+EKHY+RH+
Sbjct: 72  KRLLLAPASKRRSLFIRQLASGKSHLRNKS-LVRTIGKTWRKTMEGASRVFIEKHYNRHR 130

Query: 137 RLINDLV 143
           RL ND+V
Sbjct: 131 RLTNDVV 137