Miyakogusa Predicted Gene

Lj1g3v4316420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4316420.1 Non Chatacterized Hit- tr|G7KVB8|G7KVB8_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,70,1e-16,
,CUFF.32237.1
         (60 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06810.1 | Symbols:  | Mitochondrial transcription terminatio...    68   1e-12

>AT5G06810.1 | Symbols:  | Mitochondrial transcription termination
            factor family protein | chr5:2108493-2112256 FORWARD
            LENGTH=1141
          Length = 1141

 Score = 67.8 bits (164), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 1/60 (1%)

Query: 2    KMEYLVKE-GYSISDLVTFPSFLSYTPSRVKLRLSMNNWLKDQGVADAGLALSTTIACTE 60
            K+ YLVKE GY +S LVTFP+ L YT  R+KLR SM +WL+D+G AD  L +ST + C++
Sbjct: 1055 KVNYLVKELGYPLSTLVTFPTCLKYTLQRMKLRFSMFSWLQDRGKADPKLQVSTILVCSD 1114



 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query: 2   KMEYLVKE-GYSISDLVTFPSFLSYTPSRVKLRLSMNNWLKDQGVADAGLALSTTIACTE 60
           K+ YL+KE GY +S LV FPS L +T  R+KLR +M +WL+ +G  D  + +ST +AC++
Sbjct: 498 KVNYLIKELGYPLSTLVDFPSCLKFTLQRMKLRFAMFSWLQARGKVDRKIKVSTMLACSD 557