Miyakogusa Predicted Gene

Lj1g3v4316390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4316390.1 tr|F2EAH4|F2EAH4_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,38.52,3e-18,seg,NULL;
SUBFAMILY NOT NAMED,NULL; MITOCHONDRIAL IMPORT INNER MEMBRANE
TRANSLOCASE SUBUNIT TIM22,NU,CUFF.32256.1
         (162 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42210.2 | Symbols: ATOEP16-3, OEP16-3 | Mitochondrial import...   217   3e-57
AT2G42210.4 | Symbols: ATOEP16-3, OEP16-3 | Mitochondrial import...   216   4e-57
AT2G42210.3 | Symbols: ATOEP16-3, OEP16-3 | Mitochondrial import...   216   4e-57
AT2G42210.1 | Symbols: ATOEP16-3, OEP16-3 | Mitochondrial import...   216   4e-57

>AT2G42210.2 | Symbols: ATOEP16-3, OEP16-3 | Mitochondrial import
           inner membrane translocase subunit Tim17/Tim22/Tim23
           family protein | chr2:17590600-17591591 FORWARD
           LENGTH=173
          Length = 173

 Score =  217 bits (552), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 123/159 (77%)

Query: 4   IDPAELRYLENDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 63
           +DPAE+RYLE +D  LMKTIKG+ TG  AGTI+GT++ATW DVPRVERNVALPGLIRT K
Sbjct: 15  MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 74

Query: 64  MMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNXXXXXXXXXXXILGYKGRSISTALSA 123
           MMG HGLTFAAIGGVYIGVEQLVQNFR KRD  N           +LGY+ RSI TA++A
Sbjct: 75  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYRARSIPTAIAA 134

Query: 124 GSALAFTSAVLDFGGQTMKHDDGKEYAAYTTKKRPSPDA 162
           G+ LA TSA++D GGQT + D+G+EY  YT +KR   D+
Sbjct: 135 GATLAVTSALIDSGGQTTRVDNGREYYPYTVEKRAEADS 173


>AT2G42210.4 | Symbols: ATOEP16-3, OEP16-3 | Mitochondrial import
           inner membrane translocase subunit Tim17/Tim22/Tim23
           family protein | chr2:17590642-17591591 FORWARD
           LENGTH=159
          Length = 159

 Score =  216 bits (551), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 123/159 (77%)

Query: 4   IDPAELRYLENDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 63
           +DPAE+RYLE +D  LMKTIKG+ TG  AGTI+GT++ATW DVPRVERNVALPGLIRT K
Sbjct: 1   MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 60

Query: 64  MMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNXXXXXXXXXXXILGYKGRSISTALSA 123
           MMG HGLTFAAIGGVYIGVEQLVQNFR KRD  N           +LGY+ RSI TA++A
Sbjct: 61  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYRARSIPTAIAA 120

Query: 124 GSALAFTSAVLDFGGQTMKHDDGKEYAAYTTKKRPSPDA 162
           G+ LA TSA++D GGQT + D+G+EY  YT +KR   D+
Sbjct: 121 GATLAVTSALIDSGGQTTRVDNGREYYPYTVEKRAEADS 159


>AT2G42210.3 | Symbols: ATOEP16-3, OEP16-3 | Mitochondrial import
           inner membrane translocase subunit Tim17/Tim22/Tim23
           family protein | chr2:17590642-17591591 FORWARD
           LENGTH=159
          Length = 159

 Score =  216 bits (551), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 123/159 (77%)

Query: 4   IDPAELRYLENDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 63
           +DPAE+RYLE +D  LMKTIKG+ TG  AGTI+GT++ATW DVPRVERNVALPGLIRT K
Sbjct: 1   MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 60

Query: 64  MMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNXXXXXXXXXXXILGYKGRSISTALSA 123
           MMG HGLTFAAIGGVYIGVEQLVQNFR KRD  N           +LGY+ RSI TA++A
Sbjct: 61  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYRARSIPTAIAA 120

Query: 124 GSALAFTSAVLDFGGQTMKHDDGKEYAAYTTKKRPSPDA 162
           G+ LA TSA++D GGQT + D+G+EY  YT +KR   D+
Sbjct: 121 GATLAVTSALIDSGGQTTRVDNGREYYPYTVEKRAEADS 159


>AT2G42210.1 | Symbols: ATOEP16-3, OEP16-3 | Mitochondrial import
           inner membrane translocase subunit Tim17/Tim22/Tim23
           family protein | chr2:17590642-17591591 FORWARD
           LENGTH=159
          Length = 159

 Score =  216 bits (551), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 123/159 (77%)

Query: 4   IDPAELRYLENDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTFK 63
           +DPAE+RYLE +D  LMKTIKG+ TG  AGTI+GT++ATW DVPRVERNVALPGLIRT K
Sbjct: 1   MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 60

Query: 64  MMGNHGLTFAAIGGVYIGVEQLVQNFRGKRDLVNXXXXXXXXXXXILGYKGRSISTALSA 123
           MMG HGLTFAAIGGVYIGVEQLVQNFR KRD  N           +LGY+ RSI TA++A
Sbjct: 61  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYRARSIPTAIAA 120

Query: 124 GSALAFTSAVLDFGGQTMKHDDGKEYAAYTTKKRPSPDA 162
           G+ LA TSA++D GGQT + D+G+EY  YT +KR   D+
Sbjct: 121 GATLAVTSALIDSGGQTTRVDNGREYYPYTVEKRAEADS 159