Miyakogusa Predicted Gene
- Lj1g3v4316370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4316370.1 Non Chatacterized Hit- tr|I1JNI6|I1JNI6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8026
PE=,89.75,0,TBCC,Tubulin binding cofactor C; UNCHARACTERIZED,NULL;
coiled-coil,NULL; C_CAP_COFACTOR_C,C-CAP/cofa,CUFF.32279.1
(567 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57890.1 | Symbols: | Tubulin binding cofactor C domain-cont... 816 0.0
AT3G57890.2 | Symbols: | Tubulin binding cofactor C domain-cont... 798 0.0
AT2G42230.2 | Symbols: | C-CAP/cofactor C-like domain-containin... 785 0.0
AT2G42230.1 | Symbols: | C-CAP/cofactor C-like domain-containin... 758 0.0
>AT3G57890.1 | Symbols: | Tubulin binding cofactor C
domain-containing protein | chr3:21438271-21441695
FORWARD LENGTH=573
Length = 573
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/550 (71%), Positives = 448/550 (81%), Gaps = 2/550 (0%)
Query: 18 DPTNVIHPRREPFEHGLLPIPRLIFSDPTQTLISLKQKLLESSSNHRVGSAAIAESLQIS 77
+P +VIHPRR FEHGLLPI +L+F+DP QTL +KQKL +++SN+RVGSAAIA+ LQIS
Sbjct: 26 NPNSVIHPRRVSFEHGLLPIQKLVFTDPIQTLAPVKQKLADAASNNRVGSAAIADVLQIS 85
Query: 78 VEHARLVLDTLASVLHSDAEPLVAAGLGETDSVGVDVHDLVLFLYIQSYKRLLPRTHKDS 137
+HARLVL+TL SVLHS+++PLV A E DSVG D+ DL+LFLYIQSYK+LLPRTHKDS
Sbjct: 86 GDHARLVLETLGSVLHSESDPLVRAKPEEVDSVGADLRDLILFLYIQSYKKLLPRTHKDS 145
Query: 138 AAVADVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQNDEEAHQLLYLQKHLANILSLLA 197
AAVADVWPSTSAFDGYLSALSP+QLVRSNSRRFMPSQ D+EAHQL YLQKHLANI+SLLA
Sbjct: 146 AAVADVWPSTSAFDGYLSALSPIQLVRSNSRRFMPSQADDEAHQLSYLQKHLANIISLLA 205
Query: 198 EPVEGEPEESLVLTMDRFEHLGFLFHFGDKGSEGNSLSQSSPFFANSDPDMXXXXXXXXX 257
EPVEGE +ESLV +M+ FEHL FL FGDKGS+ + LSQ++PFFANSDPDM
Sbjct: 206 EPVEGEGDESLVFSMEAFEHLRFLVQFGDKGSDVSPLSQATPFFANSDPDMPAVPVPASQ 265
Query: 258 XHDWLLQNIASALEHIAERNSSKENGPASASDQDVAMTDACTAPVKVSSSTRGASFIEGI 317
HDWLLQNIASALE I ER S KENGP ++DQD AM+D C AP KV+ STRG IEG+
Sbjct: 266 VHDWLLQNIASALESITERISGKENGP--SNDQDDAMSDVCAAPNKVAPSTRGPCLIEGV 323
Query: 318 SKSSYVKHASDIKGSSIKVLNCQESSIYILAPFRYATVYGCSDATIVLGAVGKAVRVEHC 377
SK+S VK ASD++G S+KV+NC +S IY+LAP RYATV+GCSD TIVLGAVGKA++VEHC
Sbjct: 324 SKTSLVKQASDLRGRSVKVVNCHDSVIYLLAPLRYATVHGCSDTTIVLGAVGKAIKVEHC 383
Query: 378 ERVHVIVAAKRICIANCRECIFFLGVNQQPLILGDNHKLQVAPYNTFYSQLEEHMNEVGI 437
ERVHVIVAAKR+CIANCREC+FFLGVNQ+PLI+GDNHKLQVAPYNTFYS LEEHM EVG+
Sbjct: 384 ERVHVIVAAKRVCIANCRECVFFLGVNQRPLIVGDNHKLQVAPYNTFYSHLEEHMREVGL 443
Query: 438 LPTVNRWDEPLALGMVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNGLGGESTGS 497
PT+N+WD+PLALG VDPHDSLSHPAGV+D QAESA VDPDQF NF+IPN G GS
Sbjct: 444 EPTINKWDKPLALGAVDPHDSLSHPAGVADAQAESAASVDPDQFVNFLIPNWFSGAELGS 503
Query: 498 TKVNPFALPDAYRASQHKNQNNLREIXXXXXXXXXXXXXXXXXXXALHVYFKEWLYASGN 557
TK NPF LPDAY A+Q +N N E ALHVYFK+WLYASGN
Sbjct: 504 TKDNPFPLPDAYMAAQQRNLKNFEETRRSLKEAPLEENRKRELSSALHVYFKDWLYASGN 563
Query: 558 IRQLYCLHGD 567
IRQLYCL GD
Sbjct: 564 IRQLYCLQGD 573
>AT3G57890.2 | Symbols: | Tubulin binding cofactor C
domain-containing protein | chr3:21438271-21441695
FORWARD LENGTH=609
Length = 609
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/586 (66%), Positives = 448/586 (76%), Gaps = 38/586 (6%)
Query: 18 DPTNVIHPRREPFEHGLLPIPRLIFSDPTQTLISLKQKLLESSSNHRVGSAAIAESLQIS 77
+P +VIHPRR FEHGLLPI +L+F+DP QTL +KQKL +++SN+RVGSAAIA+ LQIS
Sbjct: 26 NPNSVIHPRRVSFEHGLLPIQKLVFTDPIQTLAPVKQKLADAASNNRVGSAAIADVLQIS 85
Query: 78 VEHARLVLDTLASVLHSDAEPLVAAGLGETDSVGVDVHDLVLFLYIQSYKRLLPRTHKDS 137
+HARLVL+TL SVLHS+++PLV A E DSVG D+ DL+LFLYIQSYK+LLPRTHKDS
Sbjct: 86 GDHARLVLETLGSVLHSESDPLVRAKPEEVDSVGADLRDLILFLYIQSYKKLLPRTHKDS 145
Query: 138 AAVADVWPSTSAFDGYLSALSPLQ------------------------------------ 161
AAVADVWPSTSAFDGYLSALSP+Q
Sbjct: 146 AAVADVWPSTSAFDGYLSALSPIQSCNILFPVWYGCSIESFRKQSYNLKLFSVFYSHCSL 205
Query: 162 LVRSNSRRFMPSQNDEEAHQLLYLQKHLANILSLLAEPVEGEPEESLVLTMDRFEHLGFL 221
LVRSNSRRFMPSQ D+EAHQL YLQKHLANI+SLLAEPVEGE +ESLV +M+ FEHL FL
Sbjct: 206 LVRSNSRRFMPSQADDEAHQLSYLQKHLANIISLLAEPVEGEGDESLVFSMEAFEHLRFL 265
Query: 222 FHFGDKGSEGNSLSQSSPFFANSDPDMXXXXXXXXXXHDWLLQNIASALEHIAERNSSKE 281
FGDKGS+ + LSQ++PFFANSDPDM HDWLLQNIASALE I ER S KE
Sbjct: 266 VQFGDKGSDVSPLSQATPFFANSDPDMPAVPVPASQVHDWLLQNIASALESITERISGKE 325
Query: 282 NGPASASDQDVAMTDACTAPVKVSSSTRGASFIEGISKSSYVKHASDIKGSSIKVLNCQE 341
NGP++ DQD AM+D C AP KV+ STRG IEG+SK+S VK ASD++G S+KV+NC +
Sbjct: 326 NGPSN--DQDDAMSDVCAAPNKVAPSTRGPCLIEGVSKTSLVKQASDLRGRSVKVVNCHD 383
Query: 342 SSIYILAPFRYATVYGCSDATIVLGAVGKAVRVEHCERVHVIVAAKRICIANCRECIFFL 401
S IY+LAP RYATV+GCSD TIVLGAVGKA++VEHCERVHVIVAAKR+CIANCREC+FFL
Sbjct: 384 SVIYLLAPLRYATVHGCSDTTIVLGAVGKAIKVEHCERVHVIVAAKRVCIANCRECVFFL 443
Query: 402 GVNQQPLILGDNHKLQVAPYNTFYSQLEEHMNEVGILPTVNRWDEPLALGMVDPHDSLSH 461
GVNQ+PLI+GDNHKLQVAPYNTFYS LEEHM EVG+ PT+N+WD+PLALG VDPHDSLSH
Sbjct: 444 GVNQRPLIVGDNHKLQVAPYNTFYSHLEEHMREVGLEPTINKWDKPLALGAVDPHDSLSH 503
Query: 462 PAGVSDVQAESATRVDPDQFTNFVIPNGLGGESTGSTKVNPFALPDAYRASQHKNQNNLR 521
PAGV+D QAESA VDPDQF NF+IPN G GSTK NPF LPDAY A+Q +N N
Sbjct: 504 PAGVADAQAESAASVDPDQFVNFLIPNWFSGAELGSTKDNPFPLPDAYMAAQQRNLKNFE 563
Query: 522 EIXXXXXXXXXXXXXXXXXXXALHVYFKEWLYASGNIRQLYCLHGD 567
E ALHVYFK+WLYASGNIRQLYCL GD
Sbjct: 564 ETRRSLKEAPLEENRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 609
>AT2G42230.2 | Symbols: | C-CAP/cofactor C-like domain-containing
protein | chr2:17593705-17596563 REVERSE LENGTH=568
Length = 568
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/546 (68%), Positives = 437/546 (80%)
Query: 22 VIHPRREPFEHGLLPIPRLIFSDPTQTLISLKQKLLESSSNHRVGSAAIAESLQISVEHA 81
+IHPRR PFEHGLLPI +L+F+DP QTL +KQKL ++NHRVGSAAI+++L IS +HA
Sbjct: 23 IIHPRRVPFEHGLLPIQKLVFTDPIQTLAPIKQKLASLATNHRVGSAAISDALSISDDHA 82
Query: 82 RLVLDTLASVLHSDAEPLVAAGLGETDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVA 141
RLVL+TL+SVLH + +PLV A E DSVG D+ DL+LFLYIQSYK+LLPRTHKDSA+VA
Sbjct: 83 RLVLETLSSVLHCETDPLVLAKPEEVDSVGADLRDLILFLYIQSYKKLLPRTHKDSASVA 142
Query: 142 DVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQNDEEAHQLLYLQKHLANILSLLAEPVE 201
DVWPSTSAFDGYLSALSP+QLVRSNSRRFMPS DEEAHQL YLQKH+ANI+SLLAEPVE
Sbjct: 143 DVWPSTSAFDGYLSALSPIQLVRSNSRRFMPSPTDEEAHQLSYLQKHIANIISLLAEPVE 202
Query: 202 GEPEESLVLTMDRFEHLGFLFHFGDKGSEGNSLSQSSPFFANSDPDMXXXXXXXXXXHDW 261
G+ ++SLVL+M+ EH+GFL H+GDKG + SLSQ++PFFANSDPDM +DW
Sbjct: 203 GQGDDSLVLSMESLEHIGFLVHYGDKGFDVPSLSQATPFFANSDPDMPAVPVPASQVNDW 262
Query: 262 LLQNIASALEHIAERNSSKENGPASASDQDVAMTDACTAPVKVSSSTRGASFIEGISKSS 321
LL++IASALE I+ R S KENG ++ASDQ+ AM D+ A KVSS+ RG IEG+SK+S
Sbjct: 263 LLKDIASALESISNRISGKENGASNASDQNAAMADSSVALNKVSSNDRGPCIIEGVSKTS 322
Query: 322 YVKHASDIKGSSIKVLNCQESSIYILAPFRYATVYGCSDATIVLGAVGKAVRVEHCERVH 381
K ASD+KG S+KV NC +S IY+LAP RYATVYGCSD+TIVLGA GKAV+VEHCERVH
Sbjct: 323 LFKQASDLKGRSVKVANCHDSVIYLLAPLRYATVYGCSDSTIVLGAAGKAVKVEHCERVH 382
Query: 382 VIVAAKRICIANCRECIFFLGVNQQPLILGDNHKLQVAPYNTFYSQLEEHMNEVGILPTV 441
VIVA KRICIANCREC+FFLGVNQ+PLI+GDNHKLQVAPYNTFYS LEEH+ EVGI PT+
Sbjct: 383 VIVATKRICIANCRECVFFLGVNQRPLIVGDNHKLQVAPYNTFYSHLEEHITEVGIQPTI 442
Query: 442 NRWDEPLALGMVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNGLGGESTGSTKVN 501
N+W+E LALG +DPHDSLSHP G SD QAE A+ VDPDQFT F+IPN GE+ GSTK N
Sbjct: 443 NKWNESLALGAIDPHDSLSHPTGASDKQAEPASCVDPDQFTTFLIPNWFAGEAIGSTKDN 502
Query: 502 PFALPDAYRASQHKNQNNLREIXXXXXXXXXXXXXXXXXXXALHVYFKEWLYASGNIRQL 561
PF LPDAY+A Q N NL E A H+YFK+WLYA+GNIRQL
Sbjct: 503 PFPLPDAYKAVQQTNLKNLEETRQSLRETPLEENRKRELTTAFHMYFKDWLYATGNIRQL 562
Query: 562 YCLHGD 567
YCL GD
Sbjct: 563 YCLQGD 568
>AT2G42230.1 | Symbols: | C-CAP/cofactor C-like domain-containing
protein | chr2:17593807-17596563 REVERSE LENGTH=562
Length = 562
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/534 (67%), Positives = 425/534 (79%)
Query: 22 VIHPRREPFEHGLLPIPRLIFSDPTQTLISLKQKLLESSSNHRVGSAAIAESLQISVEHA 81
+IHPRR PFEHGLLPI +L+F+DP QTL +KQKL ++NHRVGSAAI+++L IS +HA
Sbjct: 23 IIHPRRVPFEHGLLPIQKLVFTDPIQTLAPIKQKLASLATNHRVGSAAISDALSISDDHA 82
Query: 82 RLVLDTLASVLHSDAEPLVAAGLGETDSVGVDVHDLVLFLYIQSYKRLLPRTHKDSAAVA 141
RLVL+TL+SVLH + +PLV A E DSVG D+ DL+LFLYIQSYK+LLPRTHKDSA+VA
Sbjct: 83 RLVLETLSSVLHCETDPLVLAKPEEVDSVGADLRDLILFLYIQSYKKLLPRTHKDSASVA 142
Query: 142 DVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQNDEEAHQLLYLQKHLANILSLLAEPVE 201
DVWPSTSAFDGYLSALSP+QLVRSNSRRFMPS DEEAHQL YLQKH+ANI+SLLAEPVE
Sbjct: 143 DVWPSTSAFDGYLSALSPIQLVRSNSRRFMPSPTDEEAHQLSYLQKHIANIISLLAEPVE 202
Query: 202 GEPEESLVLTMDRFEHLGFLFHFGDKGSEGNSLSQSSPFFANSDPDMXXXXXXXXXXHDW 261
G+ ++SLVL+M+ EH+GFL H+GDKG + SLSQ++PFFANSDPDM +DW
Sbjct: 203 GQGDDSLVLSMESLEHIGFLVHYGDKGFDVPSLSQATPFFANSDPDMPAVPVPASQVNDW 262
Query: 262 LLQNIASALEHIAERNSSKENGPASASDQDVAMTDACTAPVKVSSSTRGASFIEGISKSS 321
LL++IASALE I+ R S KENG ++ASDQ+ AM D+ A KVSS+ RG IEG+SK+S
Sbjct: 263 LLKDIASALESISNRISGKENGASNASDQNAAMADSSVALNKVSSNDRGPCIIEGVSKTS 322
Query: 322 YVKHASDIKGSSIKVLNCQESSIYILAPFRYATVYGCSDATIVLGAVGKAVRVEHCERVH 381
K ASD+KG S+KV NC +S IY+LAP RYATVYGCSD+TIVLGA GKAV+VEHCERVH
Sbjct: 323 LFKQASDLKGRSVKVANCHDSVIYLLAPLRYATVYGCSDSTIVLGAAGKAVKVEHCERVH 382
Query: 382 VIVAAKRICIANCRECIFFLGVNQQPLILGDNHKLQVAPYNTFYSQLEEHMNEVGILPTV 441
VIVA KRICIANCREC+FFLGVNQ+PLI+GDNHKLQVAPYNTFYS LEEH+ EVGI PT+
Sbjct: 383 VIVATKRICIANCRECVFFLGVNQRPLIVGDNHKLQVAPYNTFYSHLEEHITEVGIQPTI 442
Query: 442 NRWDEPLALGMVDPHDSLSHPAGVSDVQAESATRVDPDQFTNFVIPNGLGGESTGSTKVN 501
N+W+E LALG +DPHDSLSHP G SD QAE A+ VDPDQFT F+IPN GE+ GSTK N
Sbjct: 443 NKWNESLALGAIDPHDSLSHPTGASDKQAEPASCVDPDQFTTFLIPNWFAGEAIGSTKDN 502
Query: 502 PFALPDAYRASQHKNQNNLREIXXXXXXXXXXXXXXXXXXXALHVYFKEWLYAS 555
PF LPDAY+A Q N NL E A H+YFK+WLY +
Sbjct: 503 PFPLPDAYKAVQQTNLKNLEETRQSLRETPLEENRKRELTTAFHMYFKDWLYGN 556