Miyakogusa Predicted Gene

Lj1g3v4315300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4315300.1 Non Chatacterized Hit- tr|B9RJ79|B9RJ79_RICCO
Putative uncharacterized protein OS=Ricinus communis G,32.49,2e-17,
,CUFF.32227.1
         (273 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77620.1 | Symbols:  | P-loop containing nucleoside triphosph...   101   5e-22

>AT1G77620.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr1:29167934-29172867
           REVERSE LENGTH=1151
          Length = 1151

 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 90/162 (55%), Gaps = 14/162 (8%)

Query: 6   ELATPKRRGRGKEDQGSPAGESSNTKLKSPGKVTPRKRSSKNSTPKKNLKFNGIKEAASP 65
           E+   + +G+    Q     ++  TK  + GK +PRK     +TPKK    NGI  A   
Sbjct: 40  EVGDGRSQGKKTRKQKERTPKNGATKKVAKGK-SPRK-----TTPKKCATKNGIVAAGDQ 93

Query: 66  DSARKI-----DLRLEAKLSAEENSRLFAGRQIHPFFSSWKTGKKSQEPADSEHGLSEAK 120
             A  +     +LRLEAKL AEENSR+ AG+QIHPFFS+WK GK++QE   +E+G    +
Sbjct: 94  MIAANVSPPVPNLRLEAKLRAEENSRMSAGKQIHPFFSTWKGGKRNQEAVAAENGTCLGR 153

Query: 121 REGGRTTCDPTLVHVFEDVQEDT-SSLDWSDWTFLGDTTVVE 161
                 T  P  +HVF+  Q+D  ++LDW +WTF   T+  E
Sbjct: 154 GRDKIVTIGP--IHVFDKFQDDYPTTLDWKNWTFYEQTSTTE 193