Miyakogusa Predicted Gene

Lj1g3v4314270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4314270.1 tr|G4FAI8|G4FAI8_9GAMM ChaC-like protein
OS=Halomonas sp. HAL1 GN=HAL1_17111 PE=4
SV=1,48.74,3e-19,BtrG-like,NULL; SUBFAMILY NOT NAMED,NULL; CATION
TRANSPORT PROTEIN CHAC-RELATED,ChaC-like protein; n,CUFF.32222.1
         (121 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44790.1 | Symbols:  | ChaC-like family protein | chr1:169124...   175   5e-45
AT5G26220.1 | Symbols:  | ChaC-like family protein | chr5:916317...   139   4e-34
AT4G31290.1 | Symbols:  | ChaC-like family protein | chr4:151868...   132   3e-32

>AT1G44790.1 | Symbols:  | ChaC-like family protein |
           chr1:16912403-16913582 REVERSE LENGTH=199
          Length = 199

 Score =  175 bits (444), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 96/120 (80%)

Query: 1   MVMWVFGYGSLITKAGFKYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGE 60
           M MWVFGYGSLI K GF +DE L GFIK YRRVF+QGSTDHRGTP+FPGRTVTLE A  E
Sbjct: 1   MAMWVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQGSTDHRGTPDFPGRTVTLEAAHEE 60

Query: 61  ICWGAAYKISNKEDQEIALTYLEVREKQYDKKEYVDVFTEVNATTPAISGALIYSFSKQK 120
           +C G AYKI+ +ED+  AL +LEVREKQYD+KEY+D FT+ NA+ PA++G ++Y  S  K
Sbjct: 61  VCCGVAYKITKEEDKRDALLHLEVREKQYDQKEYLDFFTDSNASEPAVAGVMVYIASPDK 120


>AT5G26220.1 | Symbols:  | ChaC-like family protein |
           chr5:9163178-9164613 REVERSE LENGTH=216
          Length = 216

 Score =  139 bits (351), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 62/121 (51%), Positives = 86/121 (71%), Gaps = 1/121 (0%)

Query: 1   MVMWVFGYGSLITKAGFKYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGE 60
           MV+WVFGYGSLI   GF +DE+L+G+IKDY+RVF     DHRGTPE P RT TLE + G 
Sbjct: 1   MVLWVFGYGSLIWNPGFDFDEKLIGYIKDYKRVFDLACIDHRGTPEHPARTCTLEQSTGA 60

Query: 61  ICWGAAYKI-SNKEDQEIALTYLEVREKQYDKKEYVDVFTEVNATTPAISGALIYSFSKQ 119
           ICWGAAY +    E +++A+ YLE RE +YD K  V+ +TE + +TP ++G ++++ +  
Sbjct: 61  ICWGAAYCVRGGPEKEKLAMEYLERRECEYDSKTLVEFYTENDTSTPIVTGVIVFTSTPD 120

Query: 120 K 120
           K
Sbjct: 121 K 121


>AT4G31290.1 | Symbols:  | ChaC-like family protein |
           chr4:15186851-15188278 FORWARD LENGTH=227
          Length = 227

 Score =  132 bits (333), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/121 (50%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MVMWVFGYGSLITKAGFKYDERLVGFIKDYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGE 60
           MVMWVFGYGSL+   GF YDE+++GFIK Y+RVF     DHRGTPE P RT TLE AE  
Sbjct: 1   MVMWVFGYGSLVWNPGFHYDEKVLGFIKGYKRVFDLACIDHRGTPEHPARTCTLEKAEEA 60

Query: 61  ICWGAAYKI-SNKEDQEIALTYLEVREKQYDKKEYVDVFTEVNATTPAISGALIYSFSKQ 119
           ICWG A+ +    E + +A+ YLE RE +YD K  VD + E +   PA++G ++++ +  
Sbjct: 61  ICWGTAFCVRGGPEKERLAMEYLERRECEYDLKTSVDFYKEDDPLKPAVTGVIVFTSTPD 120

Query: 120 K 120
           K
Sbjct: 121 K 121