Miyakogusa Predicted Gene

Lj1g3v4303230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4303230.1 Non Chatacterized Hit- tr|K4CQR9|K4CQR9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,85.45,5e-19,
,CUFF.32230.1
         (56 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52990.1 | Symbols:  | Pyruvate kinase family protein | chr3:...   105   6e-24
AT2G36580.1 | Symbols:  | Pyruvate kinase family protein | chr2:...   102   7e-23

>AT3G52990.1 | Symbols:  | Pyruvate kinase family protein |
          chr3:19649046-19652237 FORWARD LENGTH=527
          Length = 527

 Score =  105 bits (262), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 50/55 (90%), Positives = 54/55 (98%)

Query: 1  MPSSHLLLEEPIRMASILEPSKASFFPAMTKIVGTLGPKSRSIEAISGCLKAGMS 55
          M SSHLLLEEPIRMASILEPSK+SFFPA+TKIVGTLGPKSRS+EA+SGCLKAGMS
Sbjct: 1  MHSSHLLLEEPIRMASILEPSKSSFFPALTKIVGTLGPKSRSVEALSGCLKAGMS 55


>AT2G36580.1 | Symbols:  | Pyruvate kinase family protein |
          chr2:15339253-15342781 FORWARD LENGTH=527
          Length = 527

 Score =  102 bits (253), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 52/55 (94%)

Query: 1  MPSSHLLLEEPIRMASILEPSKASFFPAMTKIVGTLGPKSRSIEAISGCLKAGMS 55
          M SSHLLLEEPIRM SILEPSK+SFFPA+TKIVGTLGPKSRS+E I+GCLKAGMS
Sbjct: 1  MHSSHLLLEEPIRMTSILEPSKSSFFPALTKIVGTLGPKSRSVEVIAGCLKAGMS 55