Miyakogusa Predicted Gene

Lj1g3v4277590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4277590.1 tr|A4RVW9|A4RVW9_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_31127,27.1,3e-17,ARM repeat,Armadillo-type fold; seg,NULL; no
description,Armadillo-like helical,CUFF.32286.1
         (432 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57570.1 | Symbols:  | ARM repeat superfamily protein | chr3:...   416   e-116
AT3G57570.2 | Symbols:  | ARM repeat superfamily protein | chr3:...   416   e-116

>AT3G57570.1 | Symbols:  | ARM repeat superfamily protein |
            chr3:21312598-21320105 FORWARD LENGTH=1092
          Length = 1092

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/445 (53%), Positives = 311/445 (69%), Gaps = 26/445 (5%)

Query: 1    MFTDPSNATVVKFLSYISEDLANVADLVLHHVMLHVREQKKIHESFLSRWESRTYTSDEF 60
            MF +PSNA +V+FLS ISE LA+ +DLVL HV+ H+++Q K+  SF+SR  S T +S + 
Sbjct: 657  MFLEPSNAIMVRFLSCISESLADTSDLVLPHVLSHMKKQNKVDASFISR--SDTKSSVDK 714

Query: 61   EEMQRSLFERLCPLLIIKMLPMKTFNDLNSSIMYGKLGQNVIHDSDSGDTETSYK----- 115
             + ++SLF+ LCPLLI+++LP + F+D++SS +YGK          SGD+   Y+     
Sbjct: 715  TKSEKSLFDHLCPLLILRLLPQRVFDDIDSSTIYGKFL--------SGDSVNDYQDIKFE 766

Query: 116  ---CIANLLLNRAFCEFEFEDVRKLSAELCGRIHPQVLIPFVCSKLEVAMDSKDIVKIKA 172
               CIA  +L RAF +FEFE+VRKLSAELCGR+HPQVL P V  +LE A + +D +KIKA
Sbjct: 767  DCQCIATFILERAFSKFEFEEVRKLSAELCGRLHPQVLFPTVLLQLEKATEIQDSLKIKA 826

Query: 173  CLFSICTSLVVRGWESLSHPSMLAIRRMIETVLLWPCLNADSVSKAQHGCIDCLALMICA 232
            CLFSICTSL+VRGWESLSH     IR+++E +LLWP +  D +SK QHGCIDCLALMICA
Sbjct: 827  CLFSICTSLMVRGWESLSHRVTPKIRKVLENILLWPSVE-DEISKVQHGCIDCLALMICA 885

Query: 233  ELQAKESIKDSTPDRI--TVAEKKGNSVVTYVIHQFVNDKEQ-ASIPELGDGV----AAV 285
            ELQ  +S K S  ++I  T  +  G SV+ Y IH  + D+   +SIP+L   +      +
Sbjct: 886  ELQHLKSSKTSGGEKIRSTGKDTSGYSVLDYTIHCLIEDRSNCSSIPKLSTDILTCENPL 945

Query: 286  PLSFRLCMGNVLISASQKISKSCKKRFAAQVLPFLLHSLEFEMKSEIRAACIQVLFSAVY 345
            P+ FRLCM NV+ISA QK  +S KK FA + LP L+HSL+     E+RAACIQVLFSA Y
Sbjct: 946  PIPFRLCMANVIISACQKNPESSKKTFARKALPPLIHSLKVISVPEVRAACIQVLFSATY 1005

Query: 346  HLGYAVLPYASELLKISLKALRKESEKERMAGAKLIASLMASEDVILEKISGGLLEARXX 405
            HL   +LP +S+LLK+SL+ L + SEKE++AGAKL+ASLMASEDVILE IS GLLEAR  
Sbjct: 1006 HLKSTLLPVSSDLLKLSLRFLEQGSEKEKLAGAKLMASLMASEDVILENISEGLLEARSV 1065

Query: 406  XXXXXXXXXXXELRQLCSKLLACIS 430
                       ++R++C+KLLACI+
Sbjct: 1066 LSKASLSDPSRDVREVCAKLLACIT 1090


>AT3G57570.2 | Symbols:  | ARM repeat superfamily protein |
            chr3:21312598-21320105 FORWARD LENGTH=1096
          Length = 1096

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/445 (53%), Positives = 311/445 (69%), Gaps = 26/445 (5%)

Query: 1    MFTDPSNATVVKFLSYISEDLANVADLVLHHVMLHVREQKKIHESFLSRWESRTYTSDEF 60
            MF +PSNA +V+FLS ISE LA+ +DLVL HV+ H+++Q K+  SF+SR  S T +S + 
Sbjct: 661  MFLEPSNAIMVRFLSCISESLADTSDLVLPHVLSHMKKQNKVDASFISR--SDTKSSVDK 718

Query: 61   EEMQRSLFERLCPLLIIKMLPMKTFNDLNSSIMYGKLGQNVIHDSDSGDTETSYK----- 115
             + ++SLF+ LCPLLI+++LP + F+D++SS +YGK          SGD+   Y+     
Sbjct: 719  TKSEKSLFDHLCPLLILRLLPQRVFDDIDSSTIYGKFL--------SGDSVNDYQDIKFE 770

Query: 116  ---CIANLLLNRAFCEFEFEDVRKLSAELCGRIHPQVLIPFVCSKLEVAMDSKDIVKIKA 172
               CIA  +L RAF +FEFE+VRKLSAELCGR+HPQVL P V  +LE A + +D +KIKA
Sbjct: 771  DCQCIATFILERAFSKFEFEEVRKLSAELCGRLHPQVLFPTVLLQLEKATEIQDSLKIKA 830

Query: 173  CLFSICTSLVVRGWESLSHPSMLAIRRMIETVLLWPCLNADSVSKAQHGCIDCLALMICA 232
            CLFSICTSL+VRGWESLSH     IR+++E +LLWP +  D +SK QHGCIDCLALMICA
Sbjct: 831  CLFSICTSLMVRGWESLSHRVTPKIRKVLENILLWPSVE-DEISKVQHGCIDCLALMICA 889

Query: 233  ELQAKESIKDSTPDRI--TVAEKKGNSVVTYVIHQFVNDKEQ-ASIPELGDGV----AAV 285
            ELQ  +S K S  ++I  T  +  G SV+ Y IH  + D+   +SIP+L   +      +
Sbjct: 890  ELQHLKSSKTSGGEKIRSTGKDTSGYSVLDYTIHCLIEDRSNCSSIPKLSTDILTCENPL 949

Query: 286  PLSFRLCMGNVLISASQKISKSCKKRFAAQVLPFLLHSLEFEMKSEIRAACIQVLFSAVY 345
            P+ FRLCM NV+ISA QK  +S KK FA + LP L+HSL+     E+RAACIQVLFSA Y
Sbjct: 950  PIPFRLCMANVIISACQKNPESSKKTFARKALPPLIHSLKVISVPEVRAACIQVLFSATY 1009

Query: 346  HLGYAVLPYASELLKISLKALRKESEKERMAGAKLIASLMASEDVILEKISGGLLEARXX 405
            HL   +LP +S+LLK+SL+ L + SEKE++AGAKL+ASLMASEDVILE IS GLLEAR  
Sbjct: 1010 HLKSTLLPVSSDLLKLSLRFLEQGSEKEKLAGAKLMASLMASEDVILENISEGLLEARSV 1069

Query: 406  XXXXXXXXXXXELRQLCSKLLACIS 430
                       ++R++C+KLLACI+
Sbjct: 1070 LSKASLSDPSRDVREVCAKLLACIT 1094