Miyakogusa Predicted Gene
- Lj1g3v4276560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4276560.1 tr|A2Q3L7|A2Q3L7_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_7g0,80.67,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.32269.1
(598 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 753 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-128
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-126
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 444 e-124
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 437 e-123
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 435 e-122
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 424 e-119
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 423 e-118
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 420 e-117
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 417 e-117
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 416 e-116
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 413 e-115
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 413 e-115
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 412 e-115
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 411 e-115
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 411 e-115
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 407 e-114
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 407 e-113
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 398 e-111
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 396 e-110
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-110
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 392 e-109
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 385 e-107
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 385 e-107
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 377 e-105
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-105
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-104
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 374 e-103
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 370 e-102
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 367 e-101
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-101
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 364 e-100
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 362 e-100
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 361 e-100
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 358 4e-99
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 2e-98
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 356 3e-98
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 5e-98
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 1e-97
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 2e-97
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 3e-97
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 5e-97
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 1e-96
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 1e-94
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 341 7e-94
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 8e-93
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 2e-92
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 3e-92
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 335 7e-92
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 7e-92
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 6e-90
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 7e-89
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 8e-89
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 296 4e-80
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 289 4e-78
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 1e-74
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 2e-72
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 266 3e-71
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 265 6e-71
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 7e-70
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 9e-70
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 260 2e-69
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 251 9e-67
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 4e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 6e-63
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 1e-62
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 236 4e-62
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 8e-60
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 226 4e-59
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 9e-59
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 224 9e-59
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 3e-56
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 8e-56
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 213 4e-55
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 5e-53
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 2e-52
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 2e-51
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 6e-51
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 3e-49
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 192 5e-49
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 191 2e-48
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 7e-48
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 6e-47
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 179 4e-45
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 5e-43
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 8e-39
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 5e-35
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 5e-35
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 83 5e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 77 5e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 71 2e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 69 9e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 69 9e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 69 9e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 69 1e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 5e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 62 1e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 4e-09
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 56 7e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 55 1e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 52 2e-06
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 51 3e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 50 4e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 50 5e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 6e-06
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 49 9e-06
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/578 (64%), Positives = 465/578 (80%), Gaps = 3/578 (0%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
NY IC+ LL+ +RS +GLQLH +++K+GL IPL++++LINFYSK+QLP S + F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
SP +S+TTWSS+IS FAQN+LP ++L+F ++M+ L PDDH+LP+A KSCA LS
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
+G S+H L++KT Y DVFV SSLVDMYAKCGEI YAR +FDEMP RNVV+WSGM+YGY
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
Q+GE+EEAL LFK+ L E ++ VND++ SSV+ VC STLLELG+QIHG K+SFDSS
Sbjct: 194 QMGENEEALWLFKEALFE-NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSS 252
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
FV SSL+SLYSKCG EGAYQ F E+ V+NLG+WNAML A AQH+HT + ELF++MK +
Sbjct: 253 FVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMK-L 311
Query: 321 GGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
G+KPNFITFL VL ACSHAGLV++G++YF+ MK+ IEP +HYA++VD+LGRAG+LQ
Sbjct: 312 SGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQ 370
Query: 381 DAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXX 440
+A++VI MP++PTESVWGALLT C +H +TELA++ AD+VFE G VSSG+++ LSN
Sbjct: 371 EALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYA 430
Query: 441 XXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGD 500
K+LRD+G KKETGLSWVEE N+VHTFAAG+R H K+ EIY KL ELG+
Sbjct: 431 ADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGE 490
Query: 501 EMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGD 560
EM KAGY+ADTS+VL+EV G+EKNQTIRYHSERLAIAFGLITFP +RPIRVMKNLRVCGD
Sbjct: 491 EMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGD 550
Query: 561 CHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
CH AIKF+S T RV+IVRDNNRFHRFEDGKC+C DYW
Sbjct: 551 CHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/536 (42%), Positives = 332/536 (61%), Gaps = 10/536 (1%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+I Y+++ + + Q+F+ SP + TW++++S + QN + A + F +M P+
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PE 309
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
+ + A + + ++ + ++ + ++++ YA+CG+I A+N+FD
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFD 367
Query: 183 EMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLE 242
+MP R+ VSW+ MI GY Q G EALRLF Q + E +N + SS L C LE
Sbjct: 368 KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ-MEREGGRLNRSSFSSALSTCADVVALE 426
Query: 243 LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACA 302
LGKQ+HG K +++ CFV ++L+ +Y KCG++E A F+E+ +++ WN M+ +
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPG 362
+H FE MK G+KP+ T + VL ACSH GLV+KG+ YF M +DYG+ P
Sbjct: 487 RHGFGEVALRFFESMKR-EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 363 SQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVF 422
SQHYA MVDLLGRAG L+DA +++ MP EP ++WG LL R+HG+TELA AD++F
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 423 EQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGD 482
+SG+ VLLSN +RD+G+KK G SW+E N+ HTF+ GD
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 665
Query: 483 RSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLIT 542
H + EI+ LEEL M KAGYV+ TS VL +V EEK + +RYHSERLA+A+G++
Sbjct: 666 EFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMR 725
Query: 543 FPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
RPIRV+KNLRVC DCH AIK++++ITGR++I+RDNNRFH F+DG C+CGDYW
Sbjct: 726 VSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 185/417 (44%), Gaps = 51/417 (12%)
Query: 26 CNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLS---------HHLINFYSKTQLPNSS 76
CN+ + SL+R Q I K+ +T PLL + I+ Y +T N +
Sbjct: 28 CNNAHGAANFHSLKRATQ--TQIQKS--QTKPLLKCGDSDIKEWNVAISSYMRTGRCNEA 83
Query: 77 LQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAAL 136
L+VF P S+ +++ +IS + +N LA F +M P+ ++ +
Sbjct: 84 LRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------PERDLVSWNVMIKGYV 137
Query: 137 SSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMI 196
+ ++G + + DV ++++ YA+ G + AR+VFD MP +N VSW+ ++
Sbjct: 138 RNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALL 195
Query: 197 YGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF 256
YVQ + EEA LFK E+ + + C ++ K + F S
Sbjct: 196 SAYVQNSKMEEACMLFKS---RENWALVSWN-------CLLGGFVKKKKIVEARQFFDSM 245
Query: 257 DSSCFVA-SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
+ V+ +++I+ Y++ G ++ A Q F+E V+++ W AM+ Q+ ELF+
Sbjct: 246 NVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEP--GSQHYATMVDLL 373
+M V N + AG V+ + E+ K+ + + P + TM+
Sbjct: 306 KMPERNEVSWNAML----------AGYVQGER--MEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 374 GRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSG 430
+ GK+ +A + ++MP S W A++ G G S+ A R+F Q G
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVS-WAAMIAGYSQSGH----SFEALRLFVQMEREGG 405
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
+L G QLH ++K G ET + + L+ Y K + +F + +W+++I+
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS-LHALALKTAYH 155
++++ +AL FF M R GL PDD + +C+ + G + +
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
+ + +VD+ + G + A N+ MP
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/573 (39%), Positives = 350/573 (61%), Gaps = 11/573 (1%)
Query: 32 LTHSRSLRRGL----QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS 87
L + SL GL Q+H H IK + +S LI+ YS+ + + ++ +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFD 481
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
W+++++ + Q+ H L F M + G DD L T K+C L +I+ G +HA
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
A+K+ Y LD++V+S ++DMY KCG++ A+ FD +P + V+W+ MI G ++ GE+E
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 601
Query: 208 ALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASS 265
A +F Q+ + +GV ++FT++++ + T LE G+QIH K + + FV +S
Sbjct: 602 AFHVFSQMRL---MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS 658
Query: 266 LISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP 325
L+ +Y+KCG+++ AY F+ +++ N+ WNAML+ AQH T +LF+QMKS+G +KP
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG-IKP 717
Query: 326 NFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQV 385
+ +TF+ VL ACSH+GLV + + M DYGI+P +HY+ + D LGRAG ++ A +
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 386 IEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXX 445
IE M ME + S++ LL CR+ GDTE VA ++ E + S VLLSN
Sbjct: 778 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 837
Query: 446 XXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKA 505
M++ +KK+ G SW+E N++H F DRS+ +T IY K++++ ++ +
Sbjct: 838 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQE 897
Query: 506 GYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAI 565
GYV +T F L +V EEK + + YHSE+LA+AFGL++ P PIRV+KNLRVCGDCH A+
Sbjct: 898 GYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAM 957
Query: 566 KFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
K+I+K+ R +++RD NRFHRF+DG C+CGDYW
Sbjct: 958 KYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 201/384 (52%), Gaps = 24/384 (6%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
SL G Q+H +K GL+ + +S+ LIN Y K + + VF++ R +W+S+I+
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSL----HALALKT 152
AQN L A+ F Q+LR GL PD + + + K A SS+ GLSL H A+K
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK---AASSLPEGLSLSKQVHVHAIKI 446
Query: 153 AYHLDVFVASSLVDMYA-----KCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
D FV+++L+D Y+ K EI + R+ FD +V+W+ M+ GY Q + +
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHK 500
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLI 267
L+LF ++ ++ +DFTL++V + CG + GKQ+H + K+ +D +V+S ++
Sbjct: 501 TLKLF-ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 559
Query: 268 SLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF 327
+Y KCG + A AF+ + V + W M+ C ++ R F +F QM+ + GV P+
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR-LMGVLPDE 618
Query: 328 ITFLCVLYACSHAGLVEKG-QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
T + A S +E+G Q + +K + +P ++VD+ + G + DA +
Sbjct: 619 FTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLF 676
Query: 387 EEMPMEPTESVWGALLTGCRIHGD 410
+ + M + W A+L G HG+
Sbjct: 677 KRIEMMNI-TAWNAMLVGLAQHGE 699
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 155/297 (52%), Gaps = 16/297 (5%)
Query: 125 ILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEM 184
+L TA K + S+ +G +H +ALK L + V++SL++MY K + G+AR VFD M
Sbjct: 321 MLATAVK----VDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 185 PHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTL---L 241
R+++SW+ +I G Q G + EA+ LF Q L+ + + +T++SVL+ AS+L L
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQ-LLRCGLKPDQYTMTSVLK--AASSLPEGL 433
Query: 242 ELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIAC 301
L KQ+H K + S FV+++LI YS+ ++ A FE +L WNAM+
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGY 492
Query: 302 AQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG-QHYFELMKKDYGIE 360
Q ++T +LF M G +F T V C + +G Q + +K Y ++
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDF-TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 361 PGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYV 417
+ ++D+ + G + A + +P+ P + W +++GC +G+ E A +V
Sbjct: 552 LWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHV 605
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 7/199 (3%)
Query: 137 SSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMI 196
S + +G HA L + + F+ ++L+ MY+KCG + YAR VFD+MP R++VSW+ ++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 197 YGYVQLGE-----DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWC 251
Y Q E ++A LF+ +L ++ V + TLS +L++C S + + HG+
Sbjct: 113 AAYAQSSECVVENIQQAFLLFR-ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 252 FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTF 311
K D FVA +L+++Y K G V+ FEE+ R++ +WN ML A +
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 312 ELFEQMKSVGGVKPNFITF 330
+L S G+ PN IT
Sbjct: 232 DLSSAFHS-SGLNPNEITL 249
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
S L G HA I+ L ++LI+ YSK + +VF+ P R +W+S+
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 95 ISSFAQN-----DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
++++AQ+ + A FR + + + L K C + S H A
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEAL 209
K D FVA +LV++Y K G++ + +F+EMP+R+VV W+ M+ Y+++G EEA+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCG 236
L + N+ TL + R+ G
Sbjct: 232 DL-SSAFHSSGLNPNEITLRLLARISG 257
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 113/295 (38%), Gaps = 34/295 (11%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
H + K GL+ ++ L+N Y K +F P+R W+ ++ ++ +
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
A+D GL P++ ++L LA + D
Sbjct: 227 KEEAIDLSSAFHSSGLNPNE-------------------ITLRLLARISGDDSDA----- 262
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
G++ N D ++ + + Y+ G+ L+ F +VE DV
Sbjct: 263 --------GQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFAD-MVESDVEC 313
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
+ T +L L LG+Q+H K D V++SLI++Y K A F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
+ + R+L WN+++ AQ+ LF Q+ G+KP+ T VL A S
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC-GLKPDQYTMTSVLKAAS 427
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 232 LRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNL 291
LR S+ L LGK H + F+ ++LIS+YSKCG++ A + F+++ R+L
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 292 GMWNAMLIACAQHA-----HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG 346
WN++L A AQ + + + F LF ++ V + +T +L C H+G V
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQ-DVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 347 QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
+ + K G++ +V++ + GK+++ + EEMP +W +L
Sbjct: 165 ESFHGYACK-IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV-VLWNLML 218
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/564 (39%), Positives = 336/564 (59%), Gaps = 7/564 (1%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
+R++ G + H+ G + L + LIN Y K L N + Q+F+ P R+ +W+++
Sbjct: 74 NRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTM 133
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
IS++++ + AL+ MLR + P+ + + +SC +S + + LH +K
Sbjct: 134 ISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGL 190
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
DVFV S+L+D++AK GE A +VFDEM + + W+ +I G+ Q + AL LFK+
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG 274
+ TL+SVLR C LLELG Q H K +D + ++L+ +Y KCG
Sbjct: 251 -MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCG 307
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
++E A + F +++ R++ W+ M+ AQ+ ++ +LFE+MKS G KPN+IT + VL
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS-SGTKPNYITIVGVL 366
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
+ACSHAGL+E G +YF MKK YGI+P +HY M+DLLG+AGKL DAV+++ EM EP
Sbjct: 367 FACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 395 ESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKM 454
W LL CR+ + LA Y A +V +G LLSN
Sbjct: 427 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTR 486
Query: 455 LRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFV 514
+RD+GIKKE G SW+E ++H F GD SH + VE+ KL +L + GYV +T+FV
Sbjct: 487 MRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFV 546
Query: 515 LKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGR 574
L+++ GE+ ++R+HSE+LA+AFGL+T P E+ IR+ KNLR+CGDCH K SK+ R
Sbjct: 547 LQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIR 606
Query: 575 VLIVRDNNRFHRFEDGKCTCGDYW 598
+++RD R+H F+DGKC+CGDYW
Sbjct: 607 SIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A T L G+Q H HI+K + I L++ L++ Y K +L+VFN
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDMYCKCGSLEDALRVFNQM 319
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R TWS++IS AQN AL F +M G P+ + +C+ H GL
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS-----HAGL 374
Query: 144 S----LHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMI 196
+ ++K Y +D ++D+ K G++ A + +EM + V+W ++
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Query: 227 TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
T S +++ C ++ + G I + F+ + LI++Y K + A+Q F+++
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 287 QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG 346
RN+ W M+ A ++ + EL M V+PN T+ VL +C+ G+ +
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCN--GMSDVR 179
Query: 347 QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCR 406
+ ++K+ G+E + ++D+ + G+ +DA+ V +EM + VW +++ G
Sbjct: 180 MLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFA 236
Query: 407 IHGDTELASYVADRVFEQGHVS 428
+ +++A + R+ G ++
Sbjct: 237 QNSRSDVALELFKRMKRAGFIA 258
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/559 (39%), Positives = 326/559 (58%), Gaps = 2/559 (0%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G Q+HA +K G + + Y KT+L + + ++F+ P R+ TW++ IS+
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
+ P A++ F + RI P+ +C+ +++G+ LH L L++ + DV V
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
+ L+D Y KC +I + +F EM +N VSW ++ YVQ EDE+A L+ + ++
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSR-KDI 305
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
V +DF +SSVL C LELG+ IH K + + FV S+L+ +Y KCG +E +
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG-GVKPNFITFLCVLYACSH 339
QAF+E+ +NL N+++ A + LFE+M G G PN++TF+ +L ACS
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 340 AGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWG 399
AG VE G F+ M+ YGIEPG++HY+ +VD+LGRAG ++ A + I++MP++PT SVWG
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 400 ALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQG 459
AL CR+HG +L A+ +F+ SG +VLLSN + L+ G
Sbjct: 486 ALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVG 545
Query: 460 IKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVG 519
IKK G SW+ N+VH F A DRSH EI L +L +EM AGY D L ++
Sbjct: 546 IKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLE 605
Query: 520 GEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVR 579
EEK + +HSE+LA+AFGL++ P PIR+ KNLR+CGDCH+ KF+S R +IVR
Sbjct: 606 EEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVR 665
Query: 580 DNNRFHRFEDGKCTCGDYW 598
DNNRFHRF+DG C+C DYW
Sbjct: 666 DNNRFHRFKDGICSCKDYW 684
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 190/393 (48%), Gaps = 11/393 (2%)
Query: 37 SLRRGLQLHAHIIKT-GLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
S+R G +HA I+KT P L+++LIN YSK P S+ V +P R+ +W+SLI
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
S AQN AL F +M R G++P+D P A K+ A+L G +HALA+K
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
LDVFV S DMY K AR +FDE+P RN+ +W+ I V G EA+ F +
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE- 199
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
D N T + L C L LG Q+HG ++ FD+ V + LI Y KC
Sbjct: 200 FRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
+ + F E+ +N W +++ A Q+ + L+ + + V+ + VL
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK-DIVETSDFMISSVLS 318
Query: 336 ACSHAGLVEKGQHYFELMKK---DYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
AC+ +E G+ K + I GS +VD+ G+ G ++D+ Q +EMP E
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERTIFVGS----ALVDMYGKCGCIEDSEQAFDEMP-E 373
Query: 393 PTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
+L+ G G ++A + + + +G
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 148/288 (51%), Gaps = 5/288 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T C L A + L G+QLH ++++G +T + + LI+FY K + SS +F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
++A +W SL++++ QN A + + + + D ++ + +CA ++ +
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
+G S+HA A+K +FV S+LVDMY KCG I + FDEMP +N+V+ + +I GY
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 201 QLGEDEEALRLFKQVLVEEDVG--VNDFTLSSVLRVCGASTLLELGKQIHGWCFKT-SFD 257
G+ + AL LF++ + G N T S+L C + +E G +I T +
Sbjct: 388 HQGQVDMALALFEE-MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE 446
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQH 304
S ++ + + G VE AY+ +++ ++ + +W A+ AC H
Sbjct: 447 PGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/553 (40%), Positives = 333/553 (60%), Gaps = 3/553 (0%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L +G +HAHI+++ ++ + L+N Y+K + +VF P R TW++LIS
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
++Q+D P AL FF QMLR G P++ L + K+ AA G LH +K + +
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
V V S+L+D+Y + G + A+ VFD + RN VSW+ +I G+ + E+AL LF Q ++
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF-QGML 254
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+ + F+ +S+ C ++ LE GK +H + K+ F ++L+ +Y+K G++
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + F+ L R++ WN++L A AQH FE+M+ VG ++PN I+FL VL AC
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG-IRPNEISFLSVLTAC 373
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
SH+GL+++G HY+ELMKKD GI P + HY T+VDLLGRAG L A++ IEEMP+EPT ++
Sbjct: 374 SHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAI 432
Query: 398 WGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRD 457
W ALL CR+H +TEL +Y A+ VFE G +V+L N K +++
Sbjct: 433 WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Query: 458 QGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKE 517
G+KKE SWVE N +H F A D H + EI K EE+ ++ + GYV DTS V+
Sbjct: 493 SGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVH 552
Query: 518 VGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLI 577
V +E+ ++YHSE++A+AF L+ P I + KN+RVCGDCHTAIK SK+ GR +I
Sbjct: 553 VDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREII 612
Query: 578 VRDNNRFHRFEDG 590
VRD NRFH F+D
Sbjct: 613 VRDTNRFHHFKDA 625
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 12/292 (4%)
Query: 122 DDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVF 181
D T K C + G +HA L++ + D+ + ++L++MYAKCG + AR VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 182 DEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLL 241
++MP R+ V+W+ +I GY Q +AL F Q+L N+FTLSSV++ A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML-RFGYSPNEFTLSSVIKAAAAERRG 177
Query: 242 ELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIAC 301
G Q+HG+C K FDS+ V S+L+ LY++ G ++ A F+ L+ RN WNA++
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 302 AQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEP 361
A+ + T + ELF+ M G +P+ ++ + ACS G +E+G+ M I+
Sbjct: 238 ARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM-----IKS 291
Query: 362 GSQHYA----TMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
G + A T++D+ ++G + DA ++ + + S W +LLT HG
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHG 342
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 325/554 (58%), Gaps = 2/554 (0%)
Query: 45 HAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLP 104
H II+ LE L + LIN YSK + QVF+ RS +W+++I + +N +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 105 HLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSL 164
ALD F +M G + + + +C LH L++KT L+++V ++L
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 165 VDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVN 224
+D+YAKCG I A VF+ M ++ V+WS M+ GYVQ EEAL L+++ + N
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA-QRMSLEQN 262
Query: 225 DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFE 284
FTLSSV+ C L GKQ+H K+ F S+ FVASS + +Y+KCG++ +Y F
Sbjct: 263 QFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 322
Query: 285 ELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVE 344
E+Q +NL +WN ++ A+HA LFE+M+ G+ PN +TF +L C H GLVE
Sbjct: 323 EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNEVTFSSLLSVCGHTGLVE 381
Query: 345 KGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+G+ +F+LM+ YG+ P HY+ MVD+LGRAG L +A ++I+ +P +PT S+WG+LL
Sbjct: 382 EGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Query: 405 CRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKET 464
CR++ + ELA A+++FE ++G +VLLSN K+LRD +KK
Sbjct: 442 CRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVR 501
Query: 465 GLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKN 524
G SW++ ++VHTF+ G+ H + EI + L+ L + K GY L +V +K
Sbjct: 502 GKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKE 561
Query: 525 QTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRF 584
+ + HSE+LA+ FGL+ P+ P+R+MKNLR+C DCH +K S T R +IVRD NRF
Sbjct: 562 ELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRF 621
Query: 585 HRFEDGKCTCGDYW 598
H F DG C+CGD+W
Sbjct: 622 HHFSDGHCSCGDFW 635
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 145/262 (55%), Gaps = 5/262 (1%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
+LH +KT ++ + L++ Y+K + ++QVF S +S+ TWSS+++ + QN
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
AL +R+ R+ L + L + +C+ L+++ G +HA+ K+ + +VFVAS
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
S VDMYAKCG + + +F E+ +N+ W+ +I G+ + +E + LF++ + ++ +
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK-MQQDGMH 361
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA--SSLISLYSKCGAVEGAY 280
N+ T SS+L VCG + L+E G++ +T++ S V S ++ + + G + AY
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAY 420
Query: 281 QAFEELQVR-NLGMWNAMLIAC 301
+ + + +W ++L +C
Sbjct: 421 ELIKSIPFDPTASIWGSLLASC 442
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 150/294 (51%), Gaps = 6/294 (2%)
Query: 133 CAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSW 192
CA ++ + H ++ DV + + L++ Y+KCG + AR VFD M R++VSW
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 193 SGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF 252
+ MI Y + + EAL +F + + E ++FT+SSVL CG + K++H
Sbjct: 131 NTMIGLYTRNRMESEALDIFLE-MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSV 189
Query: 253 KTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFE 312
KT D + +V ++L+ LY+KCG ++ A Q FE +Q ++ W++M+ Q+ +
Sbjct: 190 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 249
Query: 313 LFEQMKSVGGVKPNFITFLCVLYACSH-AGLVEKGQHYFELMKKDYGIEPGSQHYATMVD 371
L+ + + + ++ N T V+ ACS+ A L+E Q + + K +G A VD
Sbjct: 250 LYRRAQRM-SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA--VD 306
Query: 372 LLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
+ + G L+++ + E+ E +W +++G H + + +++ + G
Sbjct: 307 MYAKCGSLRESYIIFSEV-QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRN 290
+L++C + + K HG + + + + LI+ YSKCG VE A Q F+ + R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC--SHAGLVEKGQH 348
L WN M+ ++ + ++F +M++ G K + T VL AC + L K H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRN-EGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 349 YFELMK-KDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRI 407
+ D + G+ ++DL + G ++DAVQV E M + + W +++ G
Sbjct: 186 CLSVKTCIDLNLYVGT----ALLDLYAKCGMIKDAVQVFESM-QDKSSVTWSSMVAG--- 237
Query: 408 HGDTELASYVADRVFEQG 425
YV ++ +E+
Sbjct: 238 --------YVQNKNYEEA 247
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ + + A ++ +L G Q+HA I K+G + ++ ++ Y+K S +F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ ++ W+++IS FA++ P + F +M + G+ P++ + C +
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVE 381
Query: 141 VGLSLHALALKTAYHL--DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVS-WSGM-- 195
G L ++T Y L +V S +VD+ + G + A + +P S W +
Sbjct: 382 EGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 196 ---IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSV 231
+Y ++L E A +LF+ L E+ G N LS++
Sbjct: 441 SCRVYKNLELAE-VAAEKLFE--LEPENAG-NHVLLSNI 475
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/566 (38%), Positives = 331/566 (58%), Gaps = 9/566 (1%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS-SPHRSATTWSSL 94
+ LR QLH ++K G + L+ YSK +L++F + +W+++
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
IS F QND A+D F +M R G+ P++ + +S V HA +KT Y
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNY 424
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
V ++L+D Y K G++ A VF + +++V+WS M+ GY Q GE E A+++F +
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTL-LELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
L + + N+FT SS+L VC A+ + GKQ HG+ K+ DSS V+S+L+++Y+K
Sbjct: 485 -LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 543
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G +E A + F+ + ++L WN+M+ AQH + ++F++MK VK + +TF+ V
Sbjct: 544 GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK-RKVKMDGVTFIGV 602
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
AC+HAGLVE+G+ YF++M +D I P +H + MVDL RAG+L+ A++VIE MP
Sbjct: 603 FAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 662
Query: 394 TESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXK 453
++W +L CR+H TEL A+++ S VLLSN K
Sbjct: 663 GSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRK 722
Query: 454 MLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSF 513
++ ++ +KKE G SW+E N+ ++F AGDRSH +IY KLE+L + GY DTS+
Sbjct: 723 LMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSY 782
Query: 514 VLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITG 573
VL+++ E K + HSERLAIAFGLI P+ P+ ++KNLRVCGDCH IK I+KI
Sbjct: 783 VLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEE 842
Query: 574 RVLIVRDNNRFHRF-EDGKCTCGDYW 598
R ++VRD+NRFH F DG C+CGD+W
Sbjct: 843 REIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 189/392 (48%), Gaps = 19/392 (4%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+C+ L G QLH IK G + L++ Y K +VF+
Sbjct: 105 TLCDELF----------GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R+ TW++LIS +A+N + L F +M G P+ A A GL
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H + +K + V++SL+++Y KCG + AR +FD+ ++VV+W+ MI GY G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
D EAL +F + + V +++ + +SV+++C L +Q+H K F +
Sbjct: 275 LDLEALGMFYSMRLNY-VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 264 SSLISLYSKCGAVEGAYQAFEELQ-VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
++L+ YSKC A+ A + F+E+ V N+ W AM+ Q+ +LF +MK G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-KG 392
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
V+PN T+ +L A ++ + + +++K +Y E S ++D + GK+++A
Sbjct: 393 VRPNEFTYSVILTALP---VISPSEVHAQVVKTNY--ERSSTVGTALLDAYVKLGKVEEA 447
Query: 383 VQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
+V + + W A+L G G+TE A
Sbjct: 448 AKVFSGID-DKDIVAWSAMLAGYAQTGETEAA 478
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 189/375 (50%), Gaps = 16/375 (4%)
Query: 40 RGLQLHAHIIKTGLE-TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
RGLQ+H ++K GL+ TIP+ S+ LIN Y K + +F+ + +S TW+S+IS +
Sbjct: 212 RGLQVHTVVVKNGLDKTIPV-SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
A N L AL F M + + + K CA L + LH +K + D
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ ++L+ Y+KC + A +F E+ NVVSW+ MI G++Q EEA+ LF + +
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE-MK 389
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+ V N+FT S +L + E +H KT+++ S V ++L+ Y K G VE
Sbjct: 390 RKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + F + +++ W+AML AQ T ++F ++ + GG+KPN TF +L C
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVC 504
Query: 338 --SHAGLVEKGQ-HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
++A + + Q H F + + ++ + ++ + + G ++ A +V + +
Sbjct: 505 AATNASMGQGKQFHGFAIKSR---LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 395 ESVWGALLTGCRIHG 409
S W ++++G HG
Sbjct: 562 VS-WNSMISGYAQHG 575
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 162/338 (47%), Gaps = 6/338 (1%)
Query: 68 SKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILP 127
S ++L N+ +F+ SP R ++ SL+ F+++ A F + R+G+ D I
Sbjct: 39 SSSRLYNAH-NLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 128 TAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR 187
+ K A L G LH +K + DV V +SLVD Y K R VFDEM R
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 188 NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQI 247
NVV+W+ +I GY + ++E L LF + + E N FT ++ L V + G Q+
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMR-MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
Query: 248 HGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHT 307
H K D + V++SLI+LY KCG V A F++ +V+++ WN+M+ A +
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSH-AGLVEKGQHYFELMKKDYGIEPGSQHY 366
+F M+ + V+ + +F V+ C++ L Q + ++K YG
Sbjct: 277 LEALGMFYSMR-LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK--YGFLFDQNIR 333
Query: 367 ATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
++ + + DA+++ +E+ W A+++G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 352/641 (54%), Gaps = 68/641 (10%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLP---------- 73
T+ N L ++ +R + G ++H+ I+K GL +S+ L+N Y+K P
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 74 ---------------------NSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFR 112
+ ++ F R TW+S+IS F Q ALD F
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 113 QMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKC 171
+MLR LL PD L + +CA L + +G +H+ + T + + V ++L+ MY++C
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 172 GEI-------------------------GY--------ARNVFDEMPHRNVVSWSGMIYG 198
G + GY A+N+F + R+VV+W+ MI G
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
Y Q G EA+ LF+ +V N +TL+++L V + L GKQIHG K+
Sbjct: 388 YEQHGSYGEAINLFRS-MVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQV-RNLGMWNAMLIACAQHAHTNRTFELFEQM 317
S V+++LI++Y+K G + A +AF+ ++ R+ W +M+IA AQH H ELFE M
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
+ G++P+ IT++ V AC+HAGLV +G+ YF++MK I P HYA MVDL GRAG
Sbjct: 507 L-MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 378 KLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSN 437
LQ+A + IE+MP+EP WG+LL+ CR+H + +L A+R+ +SG L+N
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 438 XXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEE 497
K ++D +KKE G SW+E ++VH F D +H + EIY +++
Sbjct: 626 LYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKK 685
Query: 498 LGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRV 557
+ DE+ K GYV DT+ VL ++ E K Q +R+HSE+LAIAFGLI+ P + +R+MKNLRV
Sbjct: 686 IWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRV 745
Query: 558 CGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
C DCHTAIKFISK+ GR +IVRD RFH F+DG C+C DYW
Sbjct: 746 CNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 211/498 (42%), Gaps = 99/498 (19%)
Query: 25 ICNHLLALTHSRSLRR--GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
+C +LL + ++S R +H +IK+GL L ++L+N YSKT + ++F+
Sbjct: 15 LCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDE 74
Query: 83 SPHRSATTWSSLISSFAQ-----------NDLP--------------------HLALDFF 111
P R+A +W++++S++++ + LP H A+
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 112 RQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKC 171
M++ G+ P L S AA + G +H+ +K +V V++SL++MYAKC
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 172 GEIGYARNVFD-------------------------------EMPHRNVVSWSGMIYGYV 200
G+ A+ VFD +M R++V+W+ MI G+
Sbjct: 195 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
Q G D AL +F ++L + + + FTL+SVL C L +GKQIH T FD S
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 261 FVASSLISLYSKCGAVEGAYQAFEE---------------------------------LQ 287
V ++LIS+YS+CG VE A + E+ L+
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 288 VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ 347
R++ W AM++ QH LF M GG +PN T +L S + G+
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG-GGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 348 HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRI 407
K I S A ++ + +AG + A + + + E W +++
Sbjct: 434 QIHGSAVKSGEIYSVSVSNA-LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 408 HGDTELASYVADRVFEQG 425
HG E A + + + +G
Sbjct: 493 HGHAEEALELFETMLMEG 510
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 331/606 (54%), Gaps = 38/606 (6%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSK--------------TQLP- 73
L + T LR G +H I++ G++ + L+N Y+K ++P
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQ 171
Query: 74 ---------------------NSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFR 112
+S +VF P + +++++I+ +AQ+ + AL R
Sbjct: 172 RTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVR 231
Query: 113 QMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCG 172
+M L PD L + + + G +H ++ DV++ SSLVDMYAK
Sbjct: 232 EMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 291
Query: 173 EIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVL 232
I + VF + R+ +SW+ ++ GYVQ G EALRLF+Q +V V SSV+
Sbjct: 292 RIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ-MVTAKVKPGAVAFSSVI 350
Query: 233 RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG 292
C L LGKQ+HG+ + F S+ F+AS+L+ +YSKCG ++ A + F+ + V +
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV 410
Query: 293 MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL 352
W A+++ A H H + LFE+MK GVKPN + F+ VL ACSH GLV++ YF
Sbjct: 411 SWTAIIMGHALHGHGHEAVSLFEEMKR-QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 353 MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTE 412
M K YG+ +HYA + DLLGRAGKL++A I +M +EPT SVW LL+ C +H + E
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLE 529
Query: 413 LASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEG 472
LA VA+++F + G VL+ N +R +G++K+ SW+E
Sbjct: 530 LAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMK 589
Query: 473 NRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSE 532
N+ H F +GDRSH +I L+ + ++M K GYVADTS VL +V E K + + HSE
Sbjct: 590 NKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSE 649
Query: 533 RLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKC 592
RLA+AFG+I IRV KN+R+C DCH AIKFISKIT R +IVRDN+RFH F G C
Sbjct: 650 RLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNC 709
Query: 593 TCGDYW 598
+CGDYW
Sbjct: 710 SCGDYW 715
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 199/433 (45%), Gaps = 49/433 (11%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHH----LINFYSKTQLPNSSLQVFNSSPHRSA 88
T +S + QLHA I+T LSH +I+ Y+ +L + +L +F +
Sbjct: 16 TRIKSKSQAKQLHAQFIRT-----QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPV 70
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
W S+I F L AL F +M G PD ++ P+ KSC + + G S+H
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIG---YARNVFDEMPHR------------------ 187
++ D++ ++L++MYAK +G NVFDEMP R
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 188 ---------------NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVL 232
+VVS++ +I GY Q G E+ALR+ ++ + D+ + FTLSSVL
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVRE-MGTTDLKPDSFTLSSVL 249
Query: 233 RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG 292
+ + GK+IHG+ + DS ++ SSL+ +Y+K +E + + F L R+
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 293 MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL 352
WN+++ Q+ N LF QM + VKP + F V+ AC+H + G+
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 353 MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTE 412
+ + G + +VD+ + G ++ A ++ + M + E W A++ G +HG
Sbjct: 369 VLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGH 426
Query: 413 LASYVADRVFEQG 425
A + + + QG
Sbjct: 427 EAVSLFEEMKRQG 439
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/576 (38%), Positives = 332/576 (57%), Gaps = 2/576 (0%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A T + RG+ +H++ IK GLE+ +S+ LI+ Y++ +VF+
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R +W+S+I ++ N+ P A+ F++M + PD L + A + L I
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 144 SLHALALKTAYHL-DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
S+ L+ + L D+ + +++V MYAK G + AR VF+ +P+ +V+SW+ +I GY Q
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV 262
G EA+ ++ + E ++ N T SVL C + L G ++HG K FV
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+SL +Y KCG +E A F ++ N WN ++ H H + LF++M G
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD-EG 547
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
VKP+ ITF+ +L ACSH+GLV++GQ FE+M+ DYGI P +HY MVD+ GRAG+L+ A
Sbjct: 548 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Query: 383 VQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXX 442
++ I+ M ++P S+WGALL+ CR+HG+ +L ++ +FE G +VLLSN
Sbjct: 608 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 667
Query: 443 XXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
+ +G++K G S +E N+V F G+++H E+Y +L L ++
Sbjct: 668 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 727
Query: 503 AKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCH 562
GYV D FVL++V +EK + HSERLAIAF LI P + IR+ KNLRVCGDCH
Sbjct: 728 KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 787
Query: 563 TAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
+ KFISKIT R +IVRD+NRFH F++G C+CGDYW
Sbjct: 788 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 194/398 (48%), Gaps = 19/398 (4%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSL--QVFNSSPHRSATTWSSLISSFAQ- 100
LHA ++ + +S L+N Y L N +L F+ +R W+ +IS + +
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLY--CYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
+ + F ML GL PD P+ K+C ++ G +H LALK + DV+V
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYV 187
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
A+SL+ +Y++ +G AR +FDEMP R++ SW+ MI GY Q G +EAL L + +
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS 247
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
V T+ S+L C + G IH + K +S FV++ LI LY++ G +
Sbjct: 248 V-----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
+ F+ + VR+L WN+++ A + R LF++M+ + ++P+ +T + + S
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR-LSRIQPDCLTLISLASILSQL 361
Query: 341 GLVE--KGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
G + + F L +K + +E + A +V + + G + A V +P S W
Sbjct: 362 GDIRACRSVQGFTL-RKGWFLEDITIGNAVVV-MYAKLGLVDSARAVFNWLPNTDVIS-W 418
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
+++G +G A + + + E+G +++ +S
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 201/412 (48%), Gaps = 23/412 (5%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
+YRT + L A R++ G ++H +K G ++ LI+ YS+ + ++ +F
Sbjct: 152 DYRTFPSVLKA---CRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHI-LPTAAKSCAALSSI 139
+ P R +W+++IS + Q+ AL L GL D + + + +C
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDF 263
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
+ G+++H+ ++K ++FV++ L+D+YA+ G + + VFD M R+++SW+ +I Y
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG-----KQIHGWCFKT 254
+ A+ LF+++ + + + TL S+ AS L +LG + + G+ +
Sbjct: 324 ELNEQPLRAISLFQEMRLSR-IQPDCLTLISL-----ASILSQLGDIRACRSVQGFTLRK 377
Query: 255 S-FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFEL 313
F + ++++ +Y+K G V+ A F L ++ WN ++ AQ+ + E+
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 437
Query: 314 FEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLL 373
+ M+ G + N T++ VL ACS AG + +G + K+ G+ ++ D+
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMY 496
Query: 374 GRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
G+ G+L+DA+ + ++P W L+ HG E A + + ++G
Sbjct: 497 GKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 17/197 (8%)
Query: 20 GNYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQV 79
N T + L A + + +LR+G++LH ++K GL + L + Y K +L +
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F P ++ W++LI+ + A+ F++ML G+ PD T +C+
Sbjct: 509 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS----- 563
Query: 140 HVGLSLHALALKTAYHLDVFVASSL------VDMYAKCGEIGYARNVFDEMPHRNVVS-W 192
H GL D + SL VDMY + G++ A M + S W
Sbjct: 564 HSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIW 623
Query: 193 SGM-----IYGYVQLGE 204
+ ++G V LG+
Sbjct: 624 GALLSACRVHGNVDLGK 640
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 8/175 (4%)
Query: 230 SVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVR 289
++ R C T L+ K +H + + +++ L++LY G V A F+ +Q R
Sbjct: 59 TLFRYC---TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHY 349
++ WN M+ + +++ F G+ P++ TF VL AC V G
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKI 172
Query: 350 FELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
L K +G A+++ L R + +A + +EMP+ S W A+++G
Sbjct: 173 HCLALK-FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMISG 225
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/590 (37%), Positives = 330/590 (55%), Gaps = 36/590 (6%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSK------------------TQLPNS------- 75
G Q+H +IK G E+ L+ L+ Y+ T + NS
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 76 ------SLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTA 129
+LQ+F + + +W+++I AQN L A++ FR+M GL D + +
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 130 AKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNV 189
+C L +I+ G +HA ++T + ++V S+L+DMY KC + YA+ VFD M +NV
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHG 249
VSW+ M+ GY Q G EEA+++F + + + +TL + C + LE G Q HG
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLD-MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 250 WCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNR 309
+ V++SL++LY KCG ++ + + F E+ VR+ W AM+ A AQ
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATM 369
T +LF++M G+KP+ +T V+ ACS AGLVEKGQ YF+LM +YGI P HY+ M
Sbjct: 456 TIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514
Query: 370 VDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFE-QGHVS 428
+DL R+G+L++A++ I MP P W LL+ CR G+ E+ + A+ + E H
Sbjct: 515 IDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHP 574
Query: 429 SGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKT 488
+G LLS+ + +R++ +KKE G SW++ ++H+F+A D S
Sbjct: 575 AGY-TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYL 633
Query: 489 VEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERP 548
+IY KLEEL +++ GY DTSFV +V K + + YHSERLAIAFGLI P +P
Sbjct: 634 DQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQP 693
Query: 549 IRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
IRV KNLRVC DCH A K IS +TGR ++VRD RFHRF+DG C+CGD+W
Sbjct: 694 IRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 177/407 (43%), Gaps = 41/407 (10%)
Query: 61 HHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL 120
++L+ YSK L + F P R TW+ LI ++ + L A+ + M+R
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 121 PDDHI-LPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARN 179
+ L T K ++ + +G +H +K + + V S L+ MYA G I A+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 180 VFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV------------------LVEEDV 221
VF + RN V ++ ++ G + G E+AL+LF+ + L +E +
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 222 -----------GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
++ + SVL CG + GKQIH +T+F +V S+LI +Y
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
KC + A F+ ++ +N+ W AM++ Q ++F M+ G+ P+ T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR-SGIDPDHYTL 374
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYAT----MVDLLGRAGKLQDAVQVI 386
+ AC++ +E+G + I G HY T +V L G+ G + D+ ++
Sbjct: 375 GQAISACANVSSLEEGSQF-----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 387 EEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNV 433
EM + S W A+++ G + D++ + G G+ +
Sbjct: 430 NEMNVRDAVS-WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 154/332 (46%), Gaps = 12/332 (3%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
++ G Q+HA II+T + + LI+ Y K + + + VF+ ++ +W++++
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
+ Q A+ F M R G+ PD + L A +CA +SS+ G H A+ +
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
V V++SLV +Y KCG+I + +F+EM R+ VSW+ M+ Y Q G E ++LF + +
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDK-M 463
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA-----SSLISLYS 271
V+ + + TL+ V+ C + L+E G++ FK V S +I L+S
Sbjct: 464 VQHGLKPDGVTLTGVISACSRAGLVEKGQRY----FKLMTSEYGIVPSIGHYSCMIDLFS 519
Query: 272 KCGAVEGAYQAFEELQVRNLGM-WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
+ G +E A + + + W +L AC + E + + P T
Sbjct: 520 RSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTL 579
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPG 362
L +YA S Q + +K+ EPG
Sbjct: 580 LSSIYA-SKGKWDSVAQLRRGMREKNVKKEPG 610
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 39/291 (13%)
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
++F ++L+ Y+K G I + F+++P R+ V+W+ +I GY G A++ + ++
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
+ + TL ++L++ ++ + LGKQIHG K F+S V S L+ +Y+ G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 277 EGAYQAFEELQVRNLGMWNAM---LIAC---------------------------AQHAH 306
A + F L RN M+N++ L+AC AQ+
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 307 TNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFE-LMKKDYG--IEPGS 363
E F +MK V G+K + F VL AC G + +G+ +++ ++ I GS
Sbjct: 251 AKEAIECFREMK-VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 364 QHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
++D+ + L A V + M + S W A++ G G E A
Sbjct: 310 ----ALIDMYCKCKCLHYAKTVFDRMKQKNVVS-WTAMVVGYGQTGRAEEA 355
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
++ T+ + A + SL G Q H I +GL +S+ L+ Y K + S ++F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
N R A +W++++S++AQ + F +M++ GL PD L +C+ +
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 141 VGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPH-RNVVSWSGMI 196
G L + + Y + + S ++D++++ G + A + MP + + W+ ++
Sbjct: 490 KGQRYFKL-MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/575 (37%), Positives = 334/575 (58%), Gaps = 6/575 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
+L H SL L++H HI+ G + P L+ LI YS + + +VF+ + R+
Sbjct: 84 ILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTI 143
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAA----LSSIHVGLS 144
W++L + L + +M RIG+ D K+C A ++ + G
Sbjct: 144 YVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKE 203
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
+HA + Y V++ ++LVDMYA+ G + YA VF MP RNVVSWS MI Y + G+
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 263
Query: 205 DEEALRLFKQVLVE-EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
EALR F++++ E +D N T+ SVL+ C + LE GK IHG+ + DS V
Sbjct: 264 AFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 323
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
S+L+++Y +CG +E + F+ + R++ WN+++ + H + + ++FE+M + G
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA-NGA 382
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
P +TF+ VL ACSH GLVE+G+ FE M +D+GI+P +HYA MVDLLGRA +L +A
Sbjct: 383 SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAA 442
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXX 443
+++++M EP VWG+LL CRIHG+ ELA + R+F ++G VLL++
Sbjct: 443 KMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQ 502
Query: 444 XXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMA 503
K+L +G++K G W+E ++++F + D + +I+ L +L ++M
Sbjct: 503 MWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562
Query: 504 KAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHT 563
+ GY+ T VL E+ EEK + + HSE+LA+AFGLI + PIR+ KNLR+C DCH
Sbjct: 563 EKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHL 622
Query: 564 AIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
KFISK + ++VRD NRFHRF++G C+CGDYW
Sbjct: 623 FTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHG 249
+S + +I + G+ ++A+R+ Q + + T ++ CG + L ++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ-----ESSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 250 WCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNR 309
D F+A+ LI +YS G+V+ A + F++ + R + +WNA+ A H
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAG-----LVEKGQHYFELMKKDYGIEPGSQ 364
L+ +M + GV+ + T+ VL AC + L++ + + L ++ Y S
Sbjct: 162 VLGLYWKMNRI-GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY-----SS 215
Query: 365 H---YATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
H T+VD+ R G + A V MP+ S W A++
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS-WSAMIA 256
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/575 (38%), Positives = 323/575 (56%), Gaps = 5/575 (0%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A+ + LR G+Q+H+ KTG + + I+ YSK +F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
++++I + N L+L F++++ G L + L I+
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY--- 339
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
++H LK+ + V+++L +Y+K EI AR +FDE P +++ SW+ MI GY Q G
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
E+A+ LF++ + + + N T++ +L C L LGK +H T F+SS +V+
Sbjct: 400 LTEDAISLFRE-MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
++LI +Y+KCG++ A + F+ + +N WN M+ H +F +M + G+
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN-SGI 517
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
P +TFLCVLYACSHAGLV++G F M YG EP +HYA MVD+LGRAG LQ A+
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXX 443
Q IE M +EP SVW LL CRIH DT LA V++++FE + G +VLLSN
Sbjct: 578 QFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADR 637
Query: 444 XXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMA 503
+ + + + K G + +E G H F +GD+SH + EIY KLE+L +M
Sbjct: 638 NYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Query: 504 KAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHT 563
+AGY +T L +V EE+ ++ HSERLAIAFGLI IR++KNLRVC DCHT
Sbjct: 698 EAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHT 757
Query: 564 AIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
K ISKIT RV++VRD NRFH F+DG C+CGDYW
Sbjct: 758 VTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 194/384 (50%), Gaps = 16/384 (4%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
R R G +H + G ++ LL +++ Y K + +VF+ P + W+++I
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 96 SSFAQNDLPHLALDFFRQML-----RIGLLPDDHILPTAAKSCAALSSIHVGLSLHALAL 150
S + +N++ ++ FR ++ R+ ILP A+ L + +G+ +H+LA
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAE----LQELRLGMQIHSLAT 248
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
KT + +V + + +Y+KCG+I +F E ++V+++ MI+GY GE E +L
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
LFK++++ + TL S++ V G L L IHG+C K++F S V+++L ++Y
Sbjct: 309 LFKELML-SGARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVY 364
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
SK +E A + F+E ++L WNAM+ Q+ T LF +M+ PN +T
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK-SEFSPNPVTI 423
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
C+L AC+ G + G+ +L++ E ++ + + G + +A ++ + M
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDLM- 481
Query: 391 MEPTESVWGALLTGCRIHGDTELA 414
+ E W +++G +HG + A
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEA 505
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 169/381 (44%), Gaps = 7/381 (1%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
S S+ Q HA II G L L S + +F S ++ L
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 95 ISSFAQNDLPHLALDFFRQMLR-IGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
+ F+ N+ PH +L F + + L P+ A + + G +H A+
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
++ + S++V MY K + AR VFD MP ++ + W+ MI GY + E++++F+
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR 209
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
++ E ++ TL +L L LG QIH KT S +V + ISLYSKC
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC 269
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G ++ F E + ++ +NAM+ + T + LF+++ + G + T + +
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGARLRSSTLVSL 328
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
+ H L+ Y +K ++ + S A + + + +++ A ++ +E P E
Sbjct: 329 VPVSGHLMLIYAIHGY--CLKSNF-LSHASVSTA-LTTVYSKLNEIESARKLFDESP-EK 383
Query: 394 TESVWGALLTGCRIHGDTELA 414
+ W A+++G +G TE A
Sbjct: 384 SLPSWNAMISGYTQNGLTEDA 404
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/578 (37%), Positives = 336/578 (58%), Gaps = 3/578 (0%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
++ TI + L A++ R + G ++H + +++G +++ +S L++ Y+K ++ Q+F
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ R+ +W+S+I ++ QN+ P A+ F++ML G+ P D + A +CA L +
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G +H L+++ +V V +SL+ MY KC E+ A ++F ++ R +VSW+ MI G+
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
Q G +AL F Q + V + FT SV+ ++ K IHG ++ D +
Sbjct: 415 QNGRPIDALNYFSQ-MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV 473
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
FV ++L+ +Y+KCGA+ A F+ + R++ WNAM+ H ELFE+M+
Sbjct: 474 FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK- 532
Query: 321 GGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
G +KPN +TFL V+ ACSH+GLVE G F +MK++Y IE HY MVDLLGRAG+L
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 592
Query: 381 DAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXX 440
+A I +MP++P +V+GA+L C+IH + A A+R+FE G +VLL+N
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 652
Query: 441 XXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGD 500
+ QG++K G S VE N VH+F +G +H + +IY LE+L
Sbjct: 653 AASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLIC 712
Query: 501 EMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGD 560
+ +AGYV DT+ VL V + K Q + HSE+LAI+FGL+ I V KNLRVC D
Sbjct: 713 HIKEAGYVPDTNLVLG-VENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCAD 771
Query: 561 CHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
CH A K+IS +TGR ++VRD RFH F++G C+CGDYW
Sbjct: 772 CHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 194/372 (52%), Gaps = 4/372 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
LR G ++H ++K+G L N Y+K + N + +VF+ P R +W+++++
Sbjct: 151 LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAG 210
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
++QN + +AL+ + M L P + + + +AL I VG +H A+++ +
Sbjct: 211 YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL 270
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
V ++++LVDMYAKCG + AR +FD M RNVVSW+ MI YVQ +EA+ +F+++L
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML- 329
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+E V D ++ L C LE G+ IH + D + V +SLIS+Y KC V+
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A F +LQ R L WNAM++ AQ+ F QM+S VKP+ T++ V+ A
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAI 448
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
+ + + ++ + ++ +VD+ + G + A ++I +M E +
Sbjct: 449 AELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTT 506
Query: 398 WGALLTGCRIHG 409
W A++ G HG
Sbjct: 507 WNAMIDGYGTHG 518
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 194/375 (51%), Gaps = 4/375 (1%)
Query: 30 LALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSAT 89
L L SL+ Q+ + K GL L++ + + + + +VF +
Sbjct: 42 LLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV 101
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
+ +++ FA+ AL FF +M + P + K C + + VG +H L
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEAL 209
+K+ + LD+F + L +MYAKC ++ AR VFD MP R++VSW+ ++ GY Q G AL
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
+ K + EE++ + T+ SVL A L+ +GK+IHG+ ++ FDS ++++L+ +
Sbjct: 222 EMVKS-MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 270 YSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
Y+KCG++E A Q F+ + RN+ WN+M+ A Q+ + +F++M GVKP ++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVS 339
Query: 330 FLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
+ L+AC+ G +E+G+ + + + G++ +++ + + ++ A + ++
Sbjct: 340 VMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 390 PMEPTESVWGALLTG 404
S W A++ G
Sbjct: 399 QSRTLVS-WNAMILG 412
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 339/576 (58%), Gaps = 7/576 (1%)
Query: 27 NHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNS---SLQVFNSS 83
N +L ++ SLR +Q+ A+ IK+ +E + ++ LINF +++ +S + +F +
Sbjct: 31 NPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAM 89
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
++S+ +++ P F ++L G+LPD++ P+ K+CA ++ G
Sbjct: 90 SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGR 149
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
LH L++K +V+V +L++MY +C ++ AR VFD + VV ++ MI GY +
Sbjct: 150 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 209
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
EAL LF++ + + + N+ TL SVL C L+LGK IH + K SF V
Sbjct: 210 RPNEALSLFRE-MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
++LI +++KCG+++ A FE+++ ++ W+AM++A A H ++ +FE+M+S V
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS-ENV 327
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
+P+ ITFL +L ACSH G VE+G+ YF M +GI P +HY +MVDLL RAG L+DA
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXX 443
+ I+++P+ PT +W LL C H + +LA V++R+FE G V+LSN
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 447
Query: 444 XXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMA 503
K+++D+ K G S +E N VH F +GD + T +++ L+E+ E+
Sbjct: 448 KWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELK 507
Query: 504 KAGYVADTSFVL-KEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCH 562
+GYV DTS V+ + +EK T+RYHSE+LAI FGL+ P IRV+KNLRVC DCH
Sbjct: 508 LSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCH 567
Query: 563 TAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
A K IS I GR +++RD RFH FEDGKC+CGD+W
Sbjct: 568 NAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/561 (36%), Positives = 326/561 (58%), Gaps = 2/561 (0%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G Q+H+ IIKT + + LI+ Y+K +++ + + +W+++I+
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ Q + AL FRQML G+ D+ L A +CA L ++ G +HA A + + D
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ ++LV +Y++CG+I + F++ + ++W+ ++ G+ Q G +EEALR+F + +
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR-MN 684
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
E + N+FT S ++ + ++ GKQ+H KT +DS V ++LIS+Y+KCG++
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + F E+ +N WNA++ A ++H + + F+QM V+PN +T + VL AC
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH-SNVRPNHVTLVGVLSAC 803
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
SH GLV+KG YFE M +YG+ P +HY +VD+L RAG L A + I+EMP++P V
Sbjct: 804 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Query: 398 WGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRD 457
W LL+ C +H + E+ + A + E S VLLSN + +++
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 458 QGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKE 517
+G+KKE G SW+E N +H+F GD++H EI+ ++L ++ GYV D +L E
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNE 983
Query: 518 VGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLI 577
+ E+K+ I HSE+LAI+FGL++ P PI VMKNLRVC DCH IKF+SK++ R +I
Sbjct: 984 LQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREII 1043
Query: 578 VRDNNRFHRFEDGKCTCGDYW 598
VRD RFH FE G C+C DYW
Sbjct: 1044 VRDAYRFHHFEGGACSCKDYW 1064
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 195/386 (50%), Gaps = 4/386 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + ++A + +L RG QLHA+ K G + + L+N Y+K ++L F +
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
+ W+ ++ ++ D + FRQM ++P+ + P+ K+C L + +G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H+ +KT + L+ +V S L+DMYAK G++ A ++ ++VVSW+ MI GY Q
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
D++AL F+Q+L + + ++ L++ + C L+ G+QIH + F S
Sbjct: 571 FDDKALTTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
++L++LYS+CG +E +Y AFE+ + + WNA++ Q + +F +M G+
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR-EGI 688
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
N TF + A S +++G+ ++ K G + ++ ++ + + G + DA
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAE 747
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHG 409
+ E+ + E W A++ HG
Sbjct: 748 KQFLEVSTK-NEVSWNAIINAYSKHG 772
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 192/363 (52%), Gaps = 6/363 (1%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
Q+HA I+ GL ++ + LI+ YS+ + + +VF+ + ++W ++IS ++N+
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
A+ F M +G++P + + +C + S+ +G LH L LK + D +V +
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
+LV +Y G + A ++F M R+ V+++ +I G Q G E+A+ LFK++ + + +
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL-DGLE 386
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
+ TL+S++ C A L G+Q+H + K F S+ + +L++LY+KC +E A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 283 FEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGL 342
F E +V N+ +WN ML+A +F +F QM+ + + PN T+ +L C G
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ-IEEIVPNQYTYPSILKTCIRLGD 505
Query: 343 VEKGQH-YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGAL 401
+E G+ + +++K ++ + + + ++D+ + GKL A ++ + S W +
Sbjct: 506 LELGEQIHSQIIKTNFQL--NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTTM 562
Query: 402 LTG 404
+ G
Sbjct: 563 IAG 565
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 195/398 (48%), Gaps = 6/398 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A SL G QLH ++K G + + + L++ Y S+ +F++ R A
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
T+++LI+ +Q A++ F++M GL PD + L + +C+A ++ G LHA
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY 414
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
K + + + +L+++YAKC +I A + F E NVV W+ M+ Y L + +
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
R+F+Q+ +EE V N +T S+L+ C LELG+QIH KT+F + +V S LI
Sbjct: 475 FRIFRQMQIEEIVP-NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
+Y+K G ++ A+ +++ W M+ Q+ ++ F QM G++ + +
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSDEV 592
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
+ AC+ +++GQ G +V L R GK++++ E+
Sbjct: 593 GLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 389 MPMEPTESV-WGALLTGCRIHGDTELASYVADRVFEQG 425
E +++ W AL++G + G+ E A V R+ +G
Sbjct: 652 --TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 176/371 (47%), Gaps = 9/371 (2%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
SL G +LH+ I+K GL++ LS L +FY + +VF+ P R+ TW+ +I
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS-SIHVGLSLHALALKTAYH 155
A +L F +M+ + P++ ++C S + V +HA L
Sbjct: 160 ELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLR 219
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
V + L+D+Y++ G + AR VFD + ++ SW MI G + + EA+RLF +
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 216 LVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
V +G+ + SSVL C LE+G+Q+HG K F S +V ++L+SLY
Sbjct: 280 YV---LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G + A F + R+ +N ++ +Q + + ELF++M + G++P+ T +
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDSNTLASL 395
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
+ ACS G + +GQ K G ++ +++L + ++ A+ E +E
Sbjct: 396 VVACSADGTLFRGQQLHAYTTK-LGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 394 TESVWGALLTG 404
+W +L
Sbjct: 455 V-VLWNVMLVA 464
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 13/289 (4%)
Query: 25 ICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSP 84
+ N + A ++L+ G Q+HA +G + + L+ YS+ S F +
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 85 HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS 144
W++L+S F Q+ AL F +M R G+ ++ +A K+ + +++ G
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
+HA+ KT Y + V ++L+ MYAKCG I A F E+ +N VSW+ +I Y + G
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
EAL F Q ++ +V N TL VL C L++ G + S +S ++
Sbjct: 774 GSEALDSFDQ-MIHSNVRPNHVTLVGVLSACSHIGLVD-----KGIAYFESMNSEYGLSP 827
Query: 265 S------LISLYSKCGAVEGAYQAFEELQVRNLGM-WNAMLIACAQHAH 306
++ + ++ G + A + +E+ ++ + W +L AC H +
Sbjct: 828 KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 37/327 (11%)
Query: 118 GLLPDDHILPTAAKSCAALS-SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGY 176
G+ P+ L + C + S+ G LH+ LK + ++ L D Y G++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 177 ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVC- 235
A VFDEMP R + +W+ MI E LF + +V E+V N+ T S VL C
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVR-MVSENVTPNEGTFSGVLEACR 197
Query: 236 GASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWN 295
G S ++ +QIH S V + LI LYS+ G V+ A + F+ L++++ W
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 296 AMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQH------- 348
AM+ +++ LF M V G+ P F VL AC +E G+
Sbjct: 258 AMISGLSKNECEAEAIRLFCDM-YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 349 ----------------YF---ELMKKDYGIEPGSQH----YATMVDLLGRAGKLQDAVQV 385
YF L+ ++ SQ Y T+++ L + G + A+++
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 386 IEEM---PMEPTESVWGALLTGCRIHG 409
+ M +EP + +L+ C G
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADG 403
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 92/184 (50%), Gaps = 14/184 (7%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + + A + + ++++G Q+HA I KTG ++ + + LI+ Y+K + + + F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
++ +W+++I++++++ ALD F QM+ + P+ L +C+ + +
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 141 VGL-------SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSW 192
G+ S + L+ K +++ V VDM + G + A+ EMP + + + W
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCV------VDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 193 SGMI 196
++
Sbjct: 865 RTLL 868
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 200 VQLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVC-GASTLLELGKQIHGWCFKTSF 256
V + EDE K++ E+ G+ N TL +L C + L+ G+++H K
Sbjct: 59 VYISEDESFQE--KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGL 116
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQ 316
DS+ ++ L Y G + GA++ F+E+ R + WN M+ A F LF +
Sbjct: 117 DSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVR 176
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY------GIEPGSQHYATMV 370
M S V PN TF VL AC G F+++++ + G+ + ++
Sbjct: 177 MVS-ENVTPNEGTFSGVLEAC------RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLI 229
Query: 371 DLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
DL R G + A +V + + ++ S W A+++G
Sbjct: 230 DLYSRNGFVDLARRVFDGLRLKD-HSSWVAMISG 262
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 320/559 (57%), Gaps = 3/559 (0%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G QLHA + TG + + +++FYSK + +F+ P +++ +ISS++Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
D +L FFR+M +G + T A LSS+ +G LH AL + V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
+SLVDMYAKC A +F +P R VSW+ +I GYVQ G L+LF + + +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTK-MRGSN 447
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+ + T ++VL+ + L LGKQ+H + ++ + F S L+ +Y+KCG+++ A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
Q FEE+ RN WNA++ A A + F +M G++P+ ++ L VL ACSH
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE-SGLQPDSVSILGVLTACSHC 566
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
G VE+G YF+ M YGI P +HYA M+DLLGR G+ +A ++++EMP EP E +W +
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSS 626
Query: 401 LLTGCRIHGDTELASYVADRVFEQGHV-SSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQG 459
+L CRIH + LA A+++F + + V +SN K +R++G
Sbjct: 627 VLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERG 686
Query: 460 IKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVG 519
IKK SWVE +++H F++ D++H EI K+ EL E+ + GY DTS V+++V
Sbjct: 687 IKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVD 746
Query: 520 GEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVR 579
+ K ++++YHSERLA+AF LI+ P+ PI VMKNLR C DCH AIK ISKI R + VR
Sbjct: 747 EQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVR 806
Query: 580 DNNRFHRFEDGKCTCGDYW 598
D +RFH F +G C+CGDYW
Sbjct: 807 DTSRFHHFSEGVCSCGDYW 825
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 196/399 (49%), Gaps = 16/399 (4%)
Query: 43 QLHAHIIKTGLETIPLL--SHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
Q+HA +K G +T P L S+ L+ Y + + + + +F P + + T+++LI+ + +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
+ L ++ F +M + G P D K+ L +G LHAL++ T + D V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
+ ++D Y+K + R +FDEMP + VS++ +I Y Q + E +L F+++ +
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM---QC 344
Query: 221 VGVN--DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
+G + +F +++L + + L++G+Q+H + DS V +SL+ +Y+KC E
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A F+ L R W A++ Q +LF +M+ ++ + TF VL A +
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG-SNLRADQSTFATVLKASA 463
Query: 339 HAGLVEKGQHYFELMKKDYGIE---PGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
+ G+ + + +E GS +VD+ + G ++DAVQV EEMP
Sbjct: 464 SFASLLLGKQLHAFIIRSGNLENVFSGS----GLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Query: 396 SVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
S W AL++ +GD E A ++ E G +++L
Sbjct: 520 S-WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 27/381 (7%)
Query: 38 LRRGLQLHAHII------KTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTW 91
LRRG A + K + T ++S H+ KT +S+ +F++ P R+ TW
Sbjct: 59 LRRGQVSAARKVYDEMPHKNTVSTNTMISGHV-----KTGDVSSARDLFDAMPDRTVVTW 113
Query: 92 SSLISSFAQNDLPHLALDFFRQMLRIG--LLPDDHILPTAAKSCA-ALSSIHVGLSLHAL 148
+ L+ +A+N A FRQM R LPD T C A+ VG +HA
Sbjct: 114 TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG-QVHAF 172
Query: 149 ALKTAYHLDVF--VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
A+K + + F V++ L+ Y + + A +F+E+P ++ V+++ +I GY + G
Sbjct: 173 AVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYT 232
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
E++ LF + + + +DFT S VL+ LG+Q+H T F V + +
Sbjct: 233 ESIHLFLK-MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI 291
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+ YSK V F+E+ + +N ++ + +Q + F +M+ +G + N
Sbjct: 292 LDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRN 351
Query: 327 FITFLCVLYACSHAGLVEKGQHYF---ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
F F +L ++ ++ G+ L D + G+ ++VD+ + ++A
Sbjct: 352 F-PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN----SLVDMYAKCEMFEEAE 406
Query: 384 QVIEEMPMEPTESVWGALLTG 404
+ + +P T S W AL++G
Sbjct: 407 LIFKSLPQRTTVS-WTALISG 426
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 48/286 (16%)
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
+ A +KT + D ++ +V+ + G++ AR V+DEMPH+N VS + MI G+V+ G+
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 205 D-------------------------------EEALRLFKQVLVEEDVGVND-FTLSSVL 232
+EA +LF+Q+ + D T +++L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 233 RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA--VEGAYQAFEELQVRN 290
C + Q+H + K FD++ F+ S + L S C ++ A FEE+ ++
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
+N ++ + + LF +M+ G +P+ TF VL A G H F
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQ-SGHQPSDFTFSGVLKAVV-------GLHDF 266
Query: 351 ELMKKDYG--IEPGSQHYAT----MVDLLGRAGKLQDAVQVIEEMP 390
L ++ + + G A+ ++D + ++ + + +EMP
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/570 (37%), Positives = 334/570 (58%), Gaps = 2/570 (0%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A T + S + G+ LH+ ++K G L++ YS + N + ++F+ P RS
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
TW++L S + + A+D F++M+ +G+ PD + + +C + + G +
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY 237
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
+ + FV ++LV++YAKCG++ AR+VFD M +++V+WS MI GY +E
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEG 297
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
+ LF Q+L +E++ + F++ L C + L+LG+ + F ++ F+A++LI
Sbjct: 298 IELFLQML-QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
+Y+KCGA+ ++ F+E++ +++ + NA + A++ H +F +F Q + +G + P+
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG-ISPDGS 415
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
TFL +L C HAGL++ G +F + Y ++ +HY MVDL GRAG L DA ++I +
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 389 MPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXX 448
MPM P VWGALL+GCR+ DT+LA V + ++G V LSN
Sbjct: 476 MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEA 535
Query: 449 XXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYV 508
M+ +G+KK G SW+E +VH F A D+SH + +IY KLE+LG+EM G+V
Sbjct: 536 AEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFV 595
Query: 509 ADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFI 568
T FV +V EEK + + YHSE+LA+A GLI+ + IRV+KNLRVCGDCH +K I
Sbjct: 596 PTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLI 655
Query: 569 SKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
SKIT R ++VRDNNRFH F +G C+C DYW
Sbjct: 656 SKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 17/349 (4%)
Query: 66 FYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHI 125
+S TQ PN L ++SLI+ F N L H LD F + + GL
Sbjct: 67 LFSHTQFPNIFL-------------YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFT 113
Query: 126 LPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
P K+C SS +G+ LH+L +K ++ DV +SL+ +Y+ G + A +FDE+P
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP 173
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
R+VV+W+ + GY G EA+ LFK+ +VE V + + + VL C L+ G+
Sbjct: 174 DRSVVTWTALFSGYTTSGRHREAIDLFKK-MVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHA 305
I + + + FV ++L++LY+KCG +E A F+ + +++ W+ M+ A ++
Sbjct: 233 WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQH 365
ELF QM +KP+ + + L +C+ G ++ G+ L+ + +
Sbjct: 293 FPKEGIELFLQMLQ-ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 366 YATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
A ++D+ + G + +V +EM E + A ++G +G +L+
Sbjct: 352 NA-LIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLS 398
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/571 (37%), Positives = 321/571 (56%), Gaps = 2/571 (0%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A R+LR G ++HAH+IKT L L+ FY K + +V + P ++
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+W+++IS ++Q AL F +M+R P++ T SC S + +G +H L
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
+K Y +FV SSL+DMYAK G+I AR +F+ +P R+VVS + +I GY QLG DEEA
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
L +F + L E + N T +S+L LL+ GKQ H + + +SLI
Sbjct: 239 LEMFHR-LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
+YSKCG + A + F+ + R WNAML+ ++H ELF M+ VKP+ +
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 329 TFLCVLYACSHAGLVEKGQHYFE-LMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE 387
T L VL CSH + + G + F+ ++ +YG +PG++HY +VD+LGRAG++ +A + I+
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 388 EMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXX 447
MP +PT V G+LL CR+H ++ V R+ E ++G V+LSN
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 448 XXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGY 507
M+ + + KE G SW++ +H F A DR+H + E+ K++E+ +M +AGY
Sbjct: 478 VNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGY 537
Query: 508 VADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKF 567
V D S VL +V E+K + + HSE+LA+ FGLI + PIRV KNLR+C DCH K
Sbjct: 538 VPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKI 597
Query: 568 ISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
SK+ R + +RD NRFH+ DG C+CGDYW
Sbjct: 598 FSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 168/331 (50%), Gaps = 9/331 (2%)
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F+SSP IS N AL +M +G H +C ++
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
G +HA +KT Y ++ + L+ Y KC + AR V DEMP +NVVSW+ MI Y
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
Q G EAL +F + ++ D N+FT ++VL C ++ L LGKQIHG K ++DS
Sbjct: 129 SQTGHSSEALTVFAE-MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
FV SSL+ +Y+K G ++ A + FE L R++ A++ AQ E+F ++ S
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKG-QHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
G+ PN++T+ +L A S L++ G Q + +++++ Q+ +++D+ + G
Sbjct: 248 -EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGN 304
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
L A ++ + MP E T W A+L G HG
Sbjct: 305 LSYARRLFDNMP-ERTAISWNAMLVGYSKHG 334
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 3/287 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T L + + L G Q+H I+K ++ + L++ Y+K + ++F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
P R + +++I+ +AQ L AL+ F ++ G+ P+ + + + L+ +
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G H L+ + +SL+DMY+KCG + YAR +FD MP R +SW+ M+ GY
Sbjct: 272 HGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYS 331
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+ G E L LF+ + E+ V + TL +VL C + + G I + +
Sbjct: 332 KHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKP 391
Query: 261 FVA--SSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQH 304
++ + + G ++ A++ + + + G+ ++L AC H
Sbjct: 392 GTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/563 (36%), Positives = 328/563 (58%), Gaps = 5/563 (0%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFN--SSPHRSATTWSSLI 95
L+ G +HA + + G + + + LI Y+K + S+ VF P R+ +W++++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
S++AQN P AL+ F QM ++ + PD L + + L + G S+HA +K
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
++ + SL MYAKCG++ A+ +FD+M N++ W+ MI GY + G EA+ +F +
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE- 313
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
++ +DV + +++S + C LE + ++ + ++ + F++S+LI +++KCG+
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
VEGA F+ R++ +W+AM++ H L+ M+ GGV PN +TFL +L
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTFLGLLM 432
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
AC+H+G+V +G +F M D+ I P QHYA ++DLLGRAG L A +VI+ MP++P
Sbjct: 433 ACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 491
Query: 396 SVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKML 455
+VWGALL+ C+ H EL Y A ++F ++G V LSN +
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551
Query: 456 RDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVL 515
+++G+ K+ G SWVE R+ F GD+SH + EI ++E + + + G+VA+ L
Sbjct: 552 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 611
Query: 516 KEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRV 575
++ EE +T+ HSER+AIA+GLI+ PQ P+R+ KNLR C +CH A K ISK+ R
Sbjct: 612 HDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDRE 671
Query: 576 LIVRDNNRFHRFEDGKCTCGDYW 598
++VRD NRFH F+DG C+CGDYW
Sbjct: 672 IVVRDTNRFHHFKDGVCSCGDYW 694
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 201/398 (50%), Gaps = 12/398 (3%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS 92
TH L+ Q+HA ++ GL+ L LI+ S + QVF+ P W+
Sbjct: 32 THKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWN 88
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
++I +++N+ AL + M + PD P K+C+ LS + +G +HA +
Sbjct: 89 AIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRL 148
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFD--EMPHRNVVSWSGMIYGYVQLGEDEEALR 210
+ DVFV + L+ +YAKC +G AR VF+ +P R +VSW+ ++ Y Q GE EAL
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
+F Q + + DV + L SVL L+ G+ IH K + + SL ++Y
Sbjct: 209 IFSQ-MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
+KCG V A F++++ NL +WNAM+ A++ + ++F +M + V+P+ I+
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KDVRPDTISI 326
Query: 331 LCVLYACSHAGLVEKGQHYFELM-KKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
+ AC+ G +E+ + +E + + DY + + ++D+ + G ++ A +++ +
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGA-RLVFDR 383
Query: 390 PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
++ VW A++ G +HG A + R E+G V
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLY-RAMERGGV 420
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/580 (36%), Positives = 338/580 (58%), Gaps = 9/580 (1%)
Query: 26 CNHLLALTHSRSLRRGLQLHAHIIKTGLE-TIPLLSHHLINFYSKTQLP---NSSLQVFN 81
C +LL S+ + Q+HA I+ G+ + L HLI + P + + +VF+
Sbjct: 18 CINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFS 77
Query: 82 S-SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSI 139
+ W++LI +A+ A +R+M GL+ PD H P K+ ++ +
Sbjct: 78 KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADV 137
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
+G ++H++ +++ + ++V +SL+ +YA CG++ A VFD+MP +++V+W+ +I G+
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
+ G+ EEAL L+ + + + + + FT+ S+L C L LGK++H + K +
Sbjct: 198 AENGKPEEALALYTE-MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 256
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
++ L+ LY++CG VE A F+E+ +N W ++++ A + ELF+ M+S
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G+ P ITF+ +LYACSH G+V++G YF M+++Y IEP +H+ MVDLL RAG++
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 380 QDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXX 439
+ A + I+ MPM+P +W LL C +HGD++LA + ++ + SG VLLSN
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 436
Query: 440 XXXXXXXXXXXXXK-MLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
K MLRD G+KK G S VE GNRVH F GD+SH ++ IY KL+E+
Sbjct: 437 ASEQRWSDVQKIRKQMLRD-GVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495
Query: 499 GDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVC 558
+ GYV S V +V EEK + YHSE++AIAF LI+ P+ PI V+KNLRVC
Sbjct: 496 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 555
Query: 559 GDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
DCH AIK +SK+ R ++VRD +RFH F++G C+C DYW
Sbjct: 556 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
TI + L A +L G ++H ++IK GL S+ L++ Y++ + +F+
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAALSSIHVG 142
+++ +W+SLI A N A++ F+ M GLLP + +C+ + G
Sbjct: 284 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343
Query: 143 LSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGY 199
+ ++ Y ++ + +VD+ A+ G++ A MP + NVV W ++
Sbjct: 344 FE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 402
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSS 230
G+ + A Q+L E D+ L S
Sbjct: 403 TVHGDSDLAEFARIQILQLEPNHSGDYVLLS 433
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/598 (36%), Positives = 326/598 (54%), Gaps = 35/598 (5%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
+R+L LHAHI+K G+ L++ L+N Y K + +LQVF+ PHR W+S+
Sbjct: 16 NRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASV 75
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
+++ Q +L L F + L PDD + K+CA L SI G +H + +
Sbjct: 76 LTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSE 135
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
Y D V SSLVDMYAKCG + A+ VFD + +N +SW+ M+ GY + G EEAL LF+
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Query: 214 QVLVE------------------------------EDVGVND-FTLSSVLRVCGASTLLE 242
+ V+ E V + D LSS++ C
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255
Query: 243 LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACA 302
G+Q+HG FDS F++++LI +Y+KC V A F ++ R++ W ++++ A
Sbjct: 256 AGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 315
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPG 362
QH + L++ M S GVKPN +TF+ ++YACSH G VEKG+ F+ M KDYGI P
Sbjct: 316 QHGQAEKALALYDDMVS-HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 363 SQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVF 422
QHY ++DLLGR+G L +A +I MP P E W ALL+ C+ G ++ +AD +
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
Query: 423 EQGHVSS-GLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAG 481
+ +LLSN + L + ++K+ G S VE F AG
Sbjct: 435 SSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAG 494
Query: 482 DRSHAKTVEIYNKLEELGDEM-AKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGL 540
+ SH +I+ L++L +EM + GYV DTS++L ++ +EK + + +HSER A+A+GL
Sbjct: 495 ETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGL 554
Query: 541 ITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
+ PIR++KNLRVCGDCH +K IS+IT R +IVRD R+H F+ GKC+C D+W
Sbjct: 555 LKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/630 (34%), Positives = 336/630 (53%), Gaps = 75/630 (11%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSK----TQLPNSSLQVFNSSPHRSATTWSSL 94
++ +Q HA +K+G I +S+ L++ YSK L +S+ +VF+ + +W+++
Sbjct: 166 KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTM 225
Query: 95 ISSFAQNDLPHL--------------------------------ALDFFRQMLRIGLLPD 122
++ + +N L AL+ R+M+ G+ D
Sbjct: 226 MTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELD 285
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKT---AYHLDVFVASSLVDMYAKCGEIGYARN 179
+ P+ ++CA + +G +HA L+ ++H D +SLV +Y KCG+ AR
Sbjct: 286 EFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARA 341
Query: 180 VFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV--------------LVEEDVGVN- 224
+F++MP +++VSW+ ++ GYV G EA +FK++ L E G
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 225 ---------------DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
D+ S ++ C G+Q H K FDSS ++LI++
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 270 YSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
Y+KCG VE A Q F + + WNA++ A QH H +++E+M G++P+ IT
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK-KGIRPDRIT 520
Query: 330 FLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
L VL ACSHAGLV++G+ YF+ M+ Y I PG+ HYA ++DLL R+GK DA VIE +
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 390 PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXX 449
P +PT +W ALL+GCR+HG+ EL AD++F G +LLSN
Sbjct: 581 PFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVA 640
Query: 450 XXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVA 509
K++RD+G+KKE SW+E +VHTF D SH + +Y L++LG EM + GYV
Sbjct: 641 RVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVP 700
Query: 510 DTSFVLKEVGGE-EKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFI 568
DTSFVL +V + K + HSE++A+AFGL+ P IR+ KNLR CGDCH +F+
Sbjct: 701 DTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFL 760
Query: 569 SKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
S + R +I+RD RFH F +G+C+CG++W
Sbjct: 761 SWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 219/509 (43%), Gaps = 115/509 (22%)
Query: 23 RTICNHLLALTHSR-SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFN 81
R N L L R SL+ +H +II G + + + LI+ Y K+ N + Q+F+
Sbjct: 14 RYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFD 73
Query: 82 --SSPHRSATT-------------------------------WSSLISSFAQNDLPHLAL 108
S P + A T ++++I+ F+ N+ + A+
Sbjct: 74 EISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAI 133
Query: 109 DFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG-LSLHALALKTAYHLDVFVASSLVDM 167
+ F +M G PD+ + A ++ + HA ALK+ V+++LV +
Sbjct: 134 NLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 168 YAKCGE----IGYARNVFDEMPHRNVVSWSGMIYGYVQ-----LGED------------- 205
Y+KC + AR VFDE+ ++ SW+ M+ GYV+ LGE+
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 206 --------------EEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWC 251
+EAL + ++ +V + +++FT SV+R C + LL+LGKQ+H +
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRR-MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 252 FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTF 311
+ D S +SL+SLY KCG + A FE++ ++L WNA+L H
Sbjct: 313 LRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEP---------- 361
+F++MK + N ++++ ++ + G E+G F MK++ G EP
Sbjct: 372 LIFKEMK-----EKNILSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEPCDYAFSGAIK 425
Query: 362 ----------GSQHYA---------------TMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
G Q++A ++ + + G +++A QV MP + S
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS 485
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQG 425
W AL+ HG A V + + ++G
Sbjct: 486 -WNALIAALGQHGHGAEAVDVYEEMLKKG 513
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 306/524 (58%), Gaps = 18/524 (3%)
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
TWS+ IS +AQ L + AL RQML G+ P++ L + CA++ ++ G +H
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 149 ALKTAYHLDV---------FVASSLVDMYAKCGEIGYARNVFDEMP--HRNVVSWSGMIY 197
A+K Y +D+ V + L+DMYAKC ++ AR +FD + R+VV+W+ MI
Sbjct: 391 AIK--YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 198 GYVQLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
GY Q G+ +AL L + + EED N FT+S L C + L +GKQIH + +
Sbjct: 449 GYSQHGDANKALELLSE-MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 256 FDS-SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELF 314
++ FV++ LI +Y+KCG++ A F+ + +N W +++ H + +F
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF 567
Query: 315 EQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLG 374
++M+ +G K + +T L VLYACSH+G++++G YF MK +G+ PG +HYA +VDLLG
Sbjct: 568 DEMRRIG-FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 375 RAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
RAG+L A+++IEEMPMEP VW A L+ CRIHG EL Y A+++ E G L
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 435 LSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNK 494
LSN ++R +G+KK G SWVE TF GD++H EIY
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 746
Query: 495 LEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKN 554
L + + GYV +T F L +V EEK+ + HSE+LA+A+G++T PQ IR+ KN
Sbjct: 747 LLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKN 806
Query: 555 LRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
LRVCGDCHTA ++S+I +I+RD++RFH F++G C+C YW
Sbjct: 807 LRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 209/446 (46%), Gaps = 50/446 (11%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
S+R G HA + TG + + + L+ YS+ + + + +VF+ +W+S+I
Sbjct: 142 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 97 SFAQNDLPHLALDFFRQML-RIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
S+A+ P +AL+ F +M G PD+ L CA+L + +G LH A+ +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
++FV + LVDMYAKCG + A VF M ++VVSW+ M+ GY Q+G E+A+RLF+++
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 216 LVE-----------------------EDVGV-----------NDFTLSSVLRVCGASTLL 241
E E +GV N+ TL SVL C + L
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 242 ELGKQIHGWCFKTSFD-------SSCFVASSLISLYSKCGAVEGAYQAFEEL--QVRNLG 292
GK+IH + K D V + LI +Y+KC V+ A F+ L + R++
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 293 MWNAMLIACAQHAHTNRTFELFEQM-KSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HY 349
W M+ +QH N+ EL +M + +PN T C L AC+ + G+ H
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 350 FELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
+ L + + + ++D+ + G + DA V + M M E W +L+TG +HG
Sbjct: 502 YALRNQQNAVPLFVSN--CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
Query: 410 DTELASYVADRVFEQGHVSSGLNVLL 435
E A + D + G G+ +L+
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLV 584
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 198/426 (46%), Gaps = 48/426 (11%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATT--WSSLISSFAQN 101
+H ++ G+ T+ L SH LI+ Y + ++ + P A W+SLI S+ N
Sbjct: 47 IHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
+ L F M + PD++ P K+C +SS+ G S HAL+L T + +VFV
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
++LV MY++C + AR VFDEM +VVSW+ +I Y +LG+ + AL +F ++ E
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
++ TL +VL C + LGKQ+H + + + FV + L+ +Y+KCG ++ A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 282 AFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS---------------------- 319
F + V+++ WNAM+ +Q LFE+M+
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 320 ------------VGGVKPNFITFLCVLYACSHAGLVEKG--------QHYFELMKKDYGI 359
G+KPN +T + VL C+ G + G ++ +L K +G
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEM-PMEPTESVWGALLTGCRIHGDTELASYVA 418
E + ++D+ + K+ A + + + P E W ++ G HGD A +
Sbjct: 406 E--NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 419 DRVFEQ 424
+FE+
Sbjct: 464 SEMFEE 469
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 146/319 (45%), Gaps = 17/319 (5%)
Query: 113 QMLRIGLLPDD--HILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAK 170
Q +++ L I P C +S + + +H L L + + S L+ Y
Sbjct: 16 QYIKVSLFSTSAPEITPPFIHKCKTISQVKL---IHQKLLSFGI-LTLNLTSHLISTYIS 71
Query: 171 CGEIGYARNVFDEMPHRN--VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTL 228
G + +A ++ P + V W+ +I Y G + L LF ++ +++T
Sbjct: 72 VGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG-LMHSLSWTPDNYTF 130
Query: 229 SSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV 288
V + CG + + G+ H T F S+ FV ++L+++YS+C ++ A + F+E+ V
Sbjct: 131 PFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV 190
Query: 289 RNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ- 347
++ WN+++ + A+ E+F +M + G +P+ IT + VL C+ G G+
Sbjct: 191 WDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ 250
Query: 348 -HYFELMKKDY-GIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGC 405
H F + + + G+ +VD+ + G + +A V M ++ S W A++ G
Sbjct: 251 LHCFAVTSEMIQNMFVGN----CLVDMYAKCGMMDEANTVFSNMSVKDVVS-WNAMVAGY 305
Query: 406 RIHGDTELASYVADRVFEQ 424
G E A + +++ E+
Sbjct: 306 SQIGRFEDAVRLFEKMQEE 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPL-LSHHLINFYSKTQLPNSSLQV 79
N TI L+A +LR G Q+HA+ ++ +PL +S+ LI+ Y+K + + V
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F++ ++ TW+SL++ + + AL F +M RIG D L +C+ I
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 140 HVGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGM- 195
G+ +KT + + + LVD+ + G + A + +EMP V W
Sbjct: 596 DQGMEYFN-RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Query: 196 ----IYGYVQLGE 204
I+G V+LGE
Sbjct: 655 SCCRIHGKVELGE 667
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 315/556 (56%), Gaps = 3/556 (0%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+H I+KT P + L+ Y++ + + +VFN P WS +I+ F QN
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
+ A+D F +M ++P++ L + CA +G LH L +K + LD++V+++
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+D+YAKC ++ A +F E+ +N VSW+ +I GY LGE +A +F++ L V V
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL-RNQVSV 447
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
+ T SS L C + ++LG Q+HG KT+ V++SLI +Y+KCG ++ A F
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
E++ ++ WNA++ + H + + + MK KPN +TFL VL CS+AGL+
Sbjct: 508 NEMETIDVASWNALISGYSTHGLGRQALRILDIMKD-RDCKPNGLTFLGVLSGCSNAGLI 566
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
++GQ FE M +D+GIEP +HY MV LLGR+G+L A+++IE +P EP+ +W A+L+
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 404 GCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKE 463
+ E A A+ + + VL+SN K +++ G+KKE
Sbjct: 627 ASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKE 686
Query: 464 TGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEK 523
GLSW+E VH F+ G H I LE L + +AGYV D + VL ++ EEK
Sbjct: 687 PGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEK 746
Query: 524 NQTIRYHSERLAIAFGLITFPQERP-IRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNN 582
++ + HSERLA+A+GL+ P R I +MKNLR+C DCH+A+K IS I R L++RD N
Sbjct: 747 DKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMN 806
Query: 583 RFHRFEDGKCTCGDYW 598
RFH F G C+CGD+W
Sbjct: 807 RFHHFHAGVCSCGDHW 822
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 194/420 (46%), Gaps = 6/420 (1%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
LH+ I+K G ++ + LIN YS +S+ VF + W+ ++S + +N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
+L M G +P+++ TA K+ L + +H LKT Y LD V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+ +Y + G++ A VF+EMP +VV WS MI + Q G EA+ LF + + E V
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR-MREAFVVP 346
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
N+FTLSS+L C LG+Q+HG K FD +V+++LI +Y+KC ++ A + F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
EL +N WN +++ + F +F + V +TF L AC+ +
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR-NQVSVTEVTFSSALGACASLASM 465
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
+ G L K + + +++D+ + G ++ A V EM S W AL++
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVS-NSLIDMYAKCGDIKFAQSVFNEMETIDVAS-WNALIS 523
Query: 404 GCRIHGDTELASYVADRVFEQGHVSSGLNVL--LSNXXXXXXXXXXXXXXXKMLRDQGIK 461
G HG A + D + ++ +GL L LS M+RD GI+
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 144/266 (54%), Gaps = 11/266 (4%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G QLH ++K G + +S+ LI+ Y+K + ++++++F ++ +W+++I +
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN 426
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
A FR+ LR + + +A +CA+L+S+ +G+ +H LA+KT V V
Sbjct: 427 LGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAV 486
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
++SL+DMYAKCG+I +A++VF+EM +V SW+ +I GY G +ALR+ ++ + D
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL-DIMKDRD 545
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS----SCFV-ASSLISLYSKCGA 275
N T VL C + L++ G++ CF++ C + ++ L + G
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQE----CFESMIRDHGIEPCLEHYTCMVRLLGRSGQ 601
Query: 276 VEGAYQAFEELQVR-NLGMWNAMLIA 300
++ A + E + ++ +W AML A
Sbjct: 602 LDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 170/376 (45%), Gaps = 17/376 (4%)
Query: 38 LRRGLQ---------LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
LRR +Q +H I+K G ++ L+N Y K +L +F+ P R+
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNN 115
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
++ +L +A D + + ++ R G + H+ + K +L + LH+
Sbjct: 116 VSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
+K Y + FV ++L++ Y+ CG + AR VF+ + +++V W+G++ YV+ G E++
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDS 231
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
L+L + N++T + L+ + K +HG KT + V L+
Sbjct: 232 LKLL-SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
LY++ G + A++ F E+ ++ W+ M+ Q+ N +LF +M+ V PN
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE-AFVVPNEF 349
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
T +L C+ G+ L+ K G + ++D+ + K+ AV++ E
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVK-VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 389 MPMEPTESVWGALLTG 404
+ E W ++ G
Sbjct: 409 LS-SKNEVSWNTVIVG 423
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 11/271 (4%)
Query: 122 DDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVF 181
D H + C + ++H LK LD+F + L++ Y K G A N+F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 182 DEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLL 241
DEMP RN VS+ + GY ++ + L+ + L E +N +S L++ +
Sbjct: 108 DEMPERNNVSFVTLAQGYAC----QDPIGLYSR-LHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 242 ELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIAC 301
E+ +H K +DS+ FV ++LI+ YS CG+V+ A FE + +++ +W ++
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 302 AQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVE--KGQHYFELMKKDYGI 359
++ + + +L M+ + G PN TF L A G + KG H +++K Y +
Sbjct: 223 VENGYFEDSLKLLSCMR-MAGFMPNNYTFDTALKASIGLGAFDFAKGVHG-QILKTCYVL 280
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
+P + ++ L + G + DA +V EMP
Sbjct: 281 DP--RVGVGLLQLYTQLGDMSDAFKVFNEMP 309
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/588 (36%), Positives = 330/588 (56%), Gaps = 14/588 (2%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTG-LETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
TI + L A +H LR G +LHA+ +K G L+ + L++ Y + S +VF+
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLR-IGLLPDDHILPTAAKSCAALSSIHV 141
R W+++I+ ++QN+ AL F M GLL + + +C +
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
++H +K D FV ++L+DMY++ G+I A +F +M R++V+W+ MI GYV
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 202 LGEDEEALRLF-KQVLVEEDVG---------VNDFTLSSVLRVCGASTLLELGKQIHGWC 251
E+AL L K +E V N TL ++L C A + L GK+IH +
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 252 FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTF 311
K + + V S+L+ +Y+KCG ++ + + F+++ +N+ WN +++A H +
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVD 371
+L M V GVKPN +TF+ V ACSH+G+V++G F +MK DYG+EP S HYA +VD
Sbjct: 604 DLLRMMM-VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 372 LLGRAGKLQDAVQVIEEMPMEPTES-VWGALLTGCRIHGDTELASYVADRVFEQGHVSSG 430
LLGRAG++++A Q++ MP + ++ W +LL RIH + E+ A + + +
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
Query: 431 LNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVE 490
VLL+N + +++QG++KE G SW+E G+ VH F AGD SH ++ +
Sbjct: 723 HYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEK 782
Query: 491 IYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIR 550
+ LE L + M K GYV DTS VL V +EK + HSE+LAIAFG++ IR
Sbjct: 783 LSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIR 842
Query: 551 VMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
V KNLRVC DCH A KFISKI R +I+RD RFHRF++G C+CGDYW
Sbjct: 843 VAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 204/415 (49%), Gaps = 21/415 (5%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T C++L L G Q+HA+ ++ G E + + L+ Y K SS + S
Sbjct: 207 TACSNL---PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSF 262
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R TW++++SS QN+ AL++ R+M+ G+ PD+ + + +C+ L + G
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 144 SLHALALKT-AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
LHA ALK + + FV S+LVDMY C ++ R VFD M R + W+ MI GY Q
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 203 GEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
D+EAL LF + +EE G+ N T++ V+ C S + IHG+ K D
Sbjct: 383 EHDKEALLLF--IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
FV ++L+ +YS+ G ++ A + F +++ R+L WN M+ H L +M+++
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 321 G----------GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
+KPN IT + +L +C+ + KG+ K+ + + +V
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALV 559
Query: 371 DLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
D+ + G LQ + +V +++P + + W ++ +HG+ + A + + QG
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVIT-WNVIIMAYGMHGNGQEAIDLLRMMMVQG 613
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 193/382 (50%), Gaps = 11/382 (2%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPL-LSHHLINFYSKTQLPNSSLQVFNSSPHRS 87
L A+ + + G Q+HAH+ K G + +++ L+N Y K + +VF+ R+
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS---SIHVGLS 144
+W+SLISS + +AL+ FR ML + P L + +C+ L + +G
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ 223
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
+HA L+ L+ F+ ++LV MY K G++ ++ + R++V+W+ ++ Q +
Sbjct: 224 VHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT-SFDSSCFVA 263
EAL ++ +V E V ++FT+SSVL C +L GK++H + K S D + FV
Sbjct: 283 LLEALEYLRE-MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
S+L+ +Y C V + F+ + R +G+WNAM+ +Q+ H LF M+ G+
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
N T V+ AC +G + + + K G++ T++D+ R GK+ A+
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 384 QVIEEMPMEPTESV-WGALLTG 404
++ + ME + V W ++TG
Sbjct: 461 RIFGK--MEDRDLVTWNTMITG 480
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 163/326 (50%), Gaps = 8/326 (2%)
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
S RS W L+ S +++L A+ + M+ +G+ PD++ P K+ A L + +G
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116
Query: 143 LSLHALALKTAYHLD-VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
+HA K Y +D V VA++LV++Y KCG+ G VFD + RN VSW+ +I
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLE---LGKQIHGWCFKTSFDS 258
+ E AL F+ +++E+V + FTL SV+ C + E +GKQ+H + + +
Sbjct: 177 FEKWEMALEAFR-CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 234
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
+ F+ ++L+++Y K G + + R+L WN +L + Q+ E +M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM- 293
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
+ GV+P+ T VL ACSH ++ G+ K+ ++ S + +VD+ +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTG 404
+ +V + M + +W A++ G
Sbjct: 354 VLSGRRVFDGM-FDRKIGLWNAMIAG 378
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 178/362 (49%), Gaps = 26/362 (7%)
Query: 20 GNYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQV 79
N T+ + A S + R +H ++K GL+ + + L++ YS+ + ++++
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQML-----------RIGLLPDDHILPT 128
F R TW+++I+ + ++ AL +M R+ L P+ L T
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 129 AAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRN 188
SCAALS++ G +HA A+K DV V S+LVDMYAKCG + +R VFD++P +N
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 189 VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIH 248
V++W+ +I Y G +EA+ L + ++V + V N+ T SV C S +++ G +I
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMV-QGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 249 GWCFKTSF--DSSCFVASSLISLYSKCGAVEGAYQAFEEL--QVRNLGMWNAMLIACAQH 304
+ K + + S + ++ L + G ++ AYQ + G W+++L A
Sbjct: 642 -YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL--GASR 698
Query: 305 AHTNRTFELFE-QMKSVGGVKPNFITFLCVLYAC-SHAGLVEKGQHYFELMKKDYGI--E 360
H N E+ E +++ ++PN + +L S AGL +K MK+ G+ E
Sbjct: 699 IHNN--LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ-GVRKE 755
Query: 361 PG 362
PG
Sbjct: 756 PG 757
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/566 (37%), Positives = 313/566 (55%), Gaps = 9/566 (1%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G Q H G ++ +S LI YS + +VF+ P R+ +W+S+I +
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHI------LPTAAKSCAALSSIHVGLSLHALALKTAY 154
N A+ F+ +L DD + L + +C+ + + + S+H+ +K +
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 155 HLDVFVASSLVDMYAKCGE--IGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
V V ++L+D YAK GE + AR +FD++ ++ VS++ ++ Y Q G EA +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
++++ + V N TLS+VL S L +GK IH + + V +S+I +Y K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 273 CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLC 332
CG VE A +AF+ ++ +N+ W AM+ H H + ELF M GV+PN+ITF+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVS 393
Query: 333 VLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
VL ACSHAGL +G +F MK +G+EPG +HY MVDLLGRAG LQ A +I+ M M+
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 393 PTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXX 452
P +W +LL CRIH + ELA R+FE + G +LLS+
Sbjct: 454 PDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVR 513
Query: 453 KMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTS 512
+++++G+ K G S +E VH F GD H + +IY L EL ++ +AGYV++TS
Sbjct: 514 MIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Query: 513 FVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKIT 572
V +V EEK T+R HSE+LAIAFG++ + V+KNLRVC DCH IK ISKI
Sbjct: 574 SVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIV 633
Query: 573 GRVLIVRDNNRFHRFEDGKCTCGDYW 598
R +VRD RFH F+DG C+CGDYW
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 172/327 (52%), Gaps = 9/327 (2%)
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
+W+S+I+ A++ AL F M ++ L P P A K+C++L I G H A
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEAL 209
Y D+FV+S+L+ MY+ CG++ AR VFDE+P RN+VSW+ MI GY G +A+
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162
Query: 210 RLFKQVLVEED-----VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
LFK +LV+E+ + ++ L SV+ C L + IH + K FD V +
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGN 222
Query: 265 SLISLYSKC--GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+L+ Y+K G V A + F+++ ++ +N+++ AQ +N FE+F ++
Sbjct: 223 TLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV 282
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
V N IT VL A SH+G + G+ + + + G+E +++D+ + G+++ A
Sbjct: 283 VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 383 VQVIEEMPMEPTESVWGALLTGCRIHG 409
+ + M + S W A++ G +HG
Sbjct: 342 RKAFDRMKNKNVRS-WTAMIAGYGMHG 367
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 188 NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQI 247
+V SW+ +I + G+ EAL F + + + + ++ C + + GKQ
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSS-MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 248 HGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHT 307
H F + S FV+S+LI +YS CG +E A + F+E+ RN+ W +M+ + +
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 308 NRTFELFEQM-----KSVGGVKPNFITFLCVLYACSHA---GLVEKGQHYFELMKKDYGI 359
LF+ + + + + + V+ ACS GL E + D G+
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 360 EPGSQHYATMVDLLGRAGK 378
G+ T++D + G+
Sbjct: 219 SVGN----TLLDAYAKGGE 233
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 99/205 (48%), Gaps = 18/205 (8%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ LLA++HS +LR G +H +I+ GLE ++ +I+ Y K ++ + F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ +++ +W+++I+ + + AL+ F M+ G+ P+ + +C+ H
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-----H 400
Query: 141 VGLSLHAL----ALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWS 193
GL + A+K + ++ + +VD+ + G + A ++ M + + + WS
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460
Query: 194 GM-----IYGYVQLGEDEEALRLFK 213
+ I+ V+L E A RLF+
Sbjct: 461 SLLAACRIHKNVELAEISVA-RLFE 484
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/539 (39%), Positives = 300/539 (55%), Gaps = 1/539 (0%)
Query: 60 SHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGL 119
S+ LIN Y + ++ +VF+ P R TTW+++I+ Q + L FR+M +G
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 120 LPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARN 179
PD++ L + A L S+ +G +H +K LD+ V SSL MY + G++
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 180 VFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGAST 239
V MP RN+V+W+ +I G Q G E L L+K + + N T +VL C
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS-GCRPNKITFVTVLSSCSDLA 206
Query: 240 LLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLI 299
+ G+QIH K S V SSLIS+YSKCG + A +AF E + + MW++M+
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266
Query: 300 ACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGI 359
A H + ELF M ++ N + FL +LYACSH+GL +KG F++M + YG
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVAD 419
+PG +HY +VDLLGRAG L A +I MP++ +W LL+ C IH + E+A V
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 420 RVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFA 479
+ + S VLL+N K +RD+ +KKE G+SW E VH F
Sbjct: 387 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 446
Query: 480 AGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFG 539
GDRS +K+ EIY+ L+EL EM GY DT+ VL ++ EEK + HSE+LA+AF
Sbjct: 447 MGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFA 506
Query: 540 LITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
L+ P+ PIR++KNLRVC DCH A K+IS I R + +RD +RFH F +GKC+CGDYW
Sbjct: 507 LMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 5/293 (1%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
RS+ G Q+H + IK GLE +++ L + Y + V S P R+ W++LI
Sbjct: 105 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 164
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
AQN P L ++ M G P+ T SC+ L+ G +HA A+K
Sbjct: 165 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 224
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
V V SSL+ MY+KCG +G A F E + V WS MI Y G+ +EA+ LF +
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF-KTSFDSSCFVASSLISLYSKCG 274
+ ++ +N+ ++L C S L + G ++ K F + ++ L + G
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAG 344
Query: 275 AVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
++ A + ++ ++ +W +L AC H + +F K + + PN
Sbjct: 345 CLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF---KEILQIDPN 394
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 41/297 (13%)
Query: 165 VDMYAKCGEI-----------------------GY--------ARNVFDEMPHRNVVSWS 193
+ MY+K G+ GY AR VFDEMP R + +W+
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 194 GMIYGYVQLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWC 251
MI G +Q +EE L LF+++ +G +++TL SV + +G+QIHG+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREM---HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 117
Query: 252 FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTF 311
K + V SSL +Y + G ++ + VRNL WN +++ AQ+
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 177
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQH-YFELMKKDYGIEPGSQHYATMV 370
L++ MK + G +PN ITF+ VL +CS + +GQ + E +K G ++++
Sbjct: 178 YLYKMMK-ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK--IGASSVVAVVSSLI 234
Query: 371 DLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
+ + G L DA + E E E +W ++++ HG + A + + + EQ ++
Sbjct: 235 SMYSKCGCLGDAAKAFSEREDE-DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 290
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/601 (35%), Positives = 333/601 (55%), Gaps = 38/601 (6%)
Query: 32 LTHSRSLRRGLQLHAHIIKTGL---ETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
+ S+S+ LQ+HA I++ L P+L+ L Y+ SL +F+ +
Sbjct: 36 IDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDL 95
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+++ I++ + N L A + Q+L + P++ + KSC+ S G +H
Sbjct: 96 FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTH 151
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR--------------------- 187
LK +D +VA+ LVD+YAK G++ A+ VFD MP R
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 188 ----------NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA 237
++VSW+ MI GY Q G +AL LF+++L E ++ T+ + L C
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 238 STLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAM 297
LE G+ IH + + + V + LI +YSKCG++E A F + +++ WNAM
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY 357
+ A H ++ LF +M+ + G++P ITF+ L AC+HAGLV +G FE M ++Y
Sbjct: 332 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEY 391
Query: 358 GIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYV 417
GI+P +HY +V LLGRAG+L+ A + I+ M M+ +W ++L C++HGD L +
Sbjct: 392 GIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEI 451
Query: 418 ADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHT 477
A+ + +SG+ VLLSN +++++GI KE G+S +E N+VH
Sbjct: 452 AEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHE 511
Query: 478 FAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIA 537
F AGDR H+K+ EIY L ++ + + GYV +T+ VL+++ EK Q+++ HSERLAIA
Sbjct: 512 FRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIA 571
Query: 538 FGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDY 597
+GLI+ P+++ KNLRVC DCHT K ISKITGR +++RD NRFH F DG C+CGD+
Sbjct: 572 YGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDF 631
Query: 598 W 598
W
Sbjct: 632 W 632
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 166/372 (44%), Gaps = 47/372 (12%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS--- 87
+L S S + G +H H++K GL P ++ L++ Y+K S+ +VF+ P RS
Sbjct: 135 SLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVS 194
Query: 88 ----------------------------ATTWSSLISSFAQNDLPHLALDFFRQMLRIGL 119
+W+ +I +AQ+ P+ AL F+++L G
Sbjct: 195 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 254
Query: 120 LPDDHILPTAAKS-CAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYAR 178
D I AA S C+ + ++ G +H + L+V V + L+DMY+KCG + A
Sbjct: 255 PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAV 314
Query: 179 NVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGAS 238
VF++ P +++V+W+ MI GY G ++ALRLF ++ + D T L+ C +
Sbjct: 315 LVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 374
Query: 239 TLLELGKQI-----HGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV-RNLG 292
L+ G +I + K + L+SL + G ++ AY+ + + + +
Sbjct: 375 GLVNEGIRIFESMGQEYGIKPKIEH----YGCLVSLLGRAGQLKRAYETIKNMNMDADSV 430
Query: 293 MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL 352
+W+++L +C H E+ E + + L +YA G E L
Sbjct: 431 LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYAS--VGDYEGVAKVRNL 488
Query: 353 MKKDYGI--EPG 362
MK+ GI EPG
Sbjct: 489 MKEK-GIVKEPG 499
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 326/575 (56%), Gaps = 1/575 (0%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
TI + SR + G +H+ +K + L++ YSK +S+ VF
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
RS +++S+I+ +A+ L A+ F +M G+ PD + + CA + G
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H + D+FV+++L+DMYAKCG + A VF EM ++++SW+ +I GY +
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 477
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
EAL LF +L E+ ++ T++ VL C + + + G++IHG+ + + S VA
Sbjct: 478 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 537
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
+SL+ +Y+KCGA+ A+ F+++ ++L W M+ H LF QM+ G+
Sbjct: 538 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ-AGI 596
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
+ + I+F+ +LYACSH+GLV++G +F +M+ + IEP +HYA +VD+L R G L A
Sbjct: 597 EADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAY 656
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXX 443
+ IE MP+ P ++WGALL GCRIH D +LA VA++VFE ++G VL++N
Sbjct: 657 RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAE 716
Query: 444 XXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMA 503
K + +G++K G SW+E RV+ F AGD S+ +T I L ++ M
Sbjct: 717 KWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMI 776
Query: 504 KAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHT 563
+ GY T + L + EK + + HSE+LA+A G+I+ + IRV KNLRVCGDCH
Sbjct: 777 EEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHE 836
Query: 564 AIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
KF+SK+T R +++RD+NRFH+F+DG C+C +W
Sbjct: 837 MAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 205/376 (54%), Gaps = 7/376 (1%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
RS+ G QLH I+K+G + + L+ FY K Q +S+ +VF+ R +W+S+I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
+ + N L L F QML G+ D + + CA I +G ++H++ +K +
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
+ ++L+DMY+KCG++ A+ VF EM R+VVS++ MI GY + G EA++LF++
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE- 387
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
+ EE + + +T+++VL C LL+ GK++H W + FV+++L+ +Y+KCG+
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
++ A F E++V+++ WN ++ +++ + N LF + P+ T CVL
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 336 ACSHAGLVEKGQH-YFELMKKDYGIEPGSQHYA-TMVDLLGRAGKLQDAVQVIEEMPMEP 393
AC+ +KG+ + +M+ Y +H A ++VD+ + G L A + +++ +
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 394 TESVWGALLTGCRIHG 409
S W ++ G +HG
Sbjct: 565 LVS-WTVMIAGYGMHG 579
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 191/383 (49%), Gaps = 6/383 (1%)
Query: 23 RTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
RT+C+ L S+SL+ G ++ I G L L Y+ + +VF+
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
A W+ L++ A++ ++ F++M+ G+ D + +KS ++L S+H G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
LH LK+ + V +SLV Y K + AR VFDEM R+V+SW+ +I GYV
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV 262
G E+ L +F Q+LV + ++ T+ SV C S L+ LG+ +H K F
Sbjct: 275 GLAEKGLSVFVQMLV-SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
++L+ +YSKCG ++ A F E+ R++ + +M+ A+ +LFE+M+ G
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EG 392
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKK-DYGIEPGSQHYATMVDLLGRAGKLQD 381
+ P+ T VL C+ L+++G+ E +K+ D G + + ++D+ + G +Q+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQE 450
Query: 382 AVQVIEEMPMEPTESVWGALLTG 404
A V EM ++ S W ++ G
Sbjct: 451 AELVFSEMRVKDIIS-WNTIIGG 472
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 157/361 (43%), Gaps = 27/361 (7%)
Query: 32 LTHSRSLRRGLQLHAHII--KTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSAT 89
L + + +R G+++ ++I + L T+ + F N+ L+ F S +
Sbjct: 21 LQNQKEIRSGVRVRKYVIFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENA 80
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
L+ + D+ D L + + CA S+ G +
Sbjct: 81 V--KLLCVSGKWDI------------------DPRTLCSVLQLCADSKSLKDGKEVDNFI 120
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEAL 209
+ +D + S L MY CG++ A VFDE+ + W+ ++ + G+ ++
Sbjct: 121 RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSI 180
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
LFK+ ++ V ++ +T S V + + + G+Q+HG+ K+ F V +SL++
Sbjct: 181 GLFKK-MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 239
Query: 270 YSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
Y K V+ A + F+E+ R++ WN+++ + + +F QM V G++ + T
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEIDLAT 298
Query: 330 FLCVLYACSHAGLVEKGQHYFEL-MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
+ V C+ + L+ G+ + +K + E + T++D+ + G L A V E
Sbjct: 299 IVSVFAGCADSRLISLGRAVHSIGVKACFSRE--DRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 389 M 389
M
Sbjct: 357 M 357
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/603 (34%), Positives = 338/603 (56%), Gaps = 35/603 (5%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L + S++ + G Q+H H++K G + + LI+ Y + + +VF+ SPHR
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 89 TT-------------------------------WSSLISSFAQNDLPHLALDFFRQMLRI 117
+ W+++IS +A+ AL+ F+ M++
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 118 GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYA 177
+ PD+ + T +CA SI +G +H + ++ + ++L+D+Y+KCGE+ A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 178 RNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA 237
+F+ +P+++V+SW+ +I GY + +EAL LF+++L + ND T+ S+L C
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILPACAH 379
Query: 238 STLLELGKQIHGWCFK--TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWN 295
+++G+ IH + K ++ + +SLI +Y+KCG +E A+Q F + ++L WN
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 296 AMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKK 355
AM+ A H + +F+LF +M+ +G ++P+ ITF+ +L ACSH+G+++ G+H F M +
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIG-IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 356 DYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELAS 415
DY + P +HY M+DLLG +G ++A ++I M MEP +W +LL C++HG+ EL
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 416 YVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRV 475
A+ + + + G VLLSN +L D+G+KK G S +E + V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 476 HTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLA 535
H F GD+ H + EIY LEE+ + KAG+V DTS VL+E+ E K +R+HSE+LA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 536 IAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCG 595
IAFGLI+ + ++KNLRVC +CH A K ISKI R +I RD RFH F DG C+C
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 596 DYW 598
DYW
Sbjct: 739 DYW 741
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 216/443 (48%), Gaps = 44/443 (9%)
Query: 22 YRTICNHL-LALTHS-RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQ----LPNS 75
Y +I NH L+L H+ ++L+ +HA +IK GL LI F + LP
Sbjct: 28 YDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP-Y 86
Query: 76 SLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAA 135
++ VF + + W+++ A + P AL + M+ +GLLP+ + P KSCA
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 136 LSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-------- 187
+ G +H LK LD++V +SL+ MY + G + A VFD+ PHR
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 188 -----------------------NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVN 224
+VVSW+ MI GY + G +EAL LFK +++ +V +
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD-MMKTNVRPD 265
Query: 225 DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFE 284
+ T+ +V+ C S +ELG+Q+H W F S+ + ++LI LYSKCG +E A FE
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 285 ELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVE 344
L +++ WN ++ LF++M G PN +T L +L AC+H G ++
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAID 384
Query: 345 KGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
G+ H + + K+ G+ S +++D+ + G ++ A QV + + + S W A++
Sbjct: 385 IGRWIHVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMI 442
Query: 403 TGCRIHGDTELASYVADRVFEQG 425
G +HG + + + R+ + G
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIG 465
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/594 (34%), Positives = 330/594 (55%), Gaps = 33/594 (5%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
SL G LH +K+ + + +++ LI+ Y +S+ +VF + + +W+S+I+
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
F Q P AL+ F++M + + +CA + ++ G + + + ++
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 157 DVFVASSLVDMYAKCGEI-----------------------GYA--------RNVFDEMP 185
++ +A++++DMY KCG I GYA R V + MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
+++V+W+ +I Y Q G+ EAL +F ++ +++++ +N TL S L C LELG+
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHA 305
IH + K + V S+LI +YSKCG +E + + F ++ R++ +W+AM+ A H
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQH 365
N ++F +M+ VKPN +TF V ACSH GLV++ + F M+ +YGI P +H
Sbjct: 446 CGNEAVDMFYKMQE-ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 366 YATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
YA +VD+LGR+G L+ AV+ IE MP+ P+ SVWGALL C+IH + LA R+ E
Sbjct: 505 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Query: 426 HVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSH 485
+ G +VLLSN K +R G+KKE G S +E +H F +GD +H
Sbjct: 565 PRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH 624
Query: 486 AKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEE-KNQTIRYHSERLAIAFGLITFP 544
+ ++Y KL E+ +++ GY + S VL+ + EE K Q++ HSE+LAI +GLI+
Sbjct: 625 PMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTE 684
Query: 545 QERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
+ IRV+KNLRVCGDCH+ K IS++ R +IVRD RFH F +G+C+C D+W
Sbjct: 685 APKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 207/416 (49%), Gaps = 37/416 (8%)
Query: 28 HLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPN--SSLQVFNSSPH 85
H+ + SLR+ Q H H+I+TG + P + L + + + + +VF+ P
Sbjct: 33 HISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 86 RSATTWSSLISSFAQNDLPHLALDFFRQML-RIGLLPDDHILPTAAKSCAALSSIHVGLS 144
++ W++LI ++A P L++ F M+ P+ + P K+ A +SS+ +G S
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
LH +A+K+A DVFVA+SL+ Y CG++ A VF + ++VVSW+ MI G+VQ G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
++AL LFK+ + EDV + T+ VL C LE G+Q+ + + + + +A+
Sbjct: 213 PDKALELFKK-MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 265 SLISLYSKCGAVEGAYQAFEELQ-------------------------------VRNLGM 293
+++ +Y+KCG++E A + F+ ++ +++
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 294 WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELM 353
WNA++ A Q+ N +F +++ +K N IT + L AC+ G +E G+ +
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 354 KKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
KK +GI + ++ + + G L+ + +V + VW A++ G +HG
Sbjct: 392 KK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV-FVWSAMIGGLAMHG 445
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 144/296 (48%), Gaps = 13/296 (4%)
Query: 146 HALALKTAYHLDVFVASSLVDMYA--KCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
H ++T D + AS L M A + YAR VFDE+P N +W+ +I Y
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
+ ++ F ++ E N +T +++ + L LG+ +HG K++ S FVA
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVA 169
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
+SLI Y CG ++ A + F ++ +++ WN+M+ Q ++ ELF++M+S V
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES-EDV 228
Query: 324 KPNFITFLCVLYACSHAGLVEKGQH---YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
K + +T + VL AC+ +E G+ Y E + + + + M+D+ + G ++
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN----AMLDMYTKCGSIE 284
Query: 381 DAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
DA ++ + M E W +L G I D E A V + + ++ V+ N L+S
Sbjct: 285 DAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA--WNALIS 337
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 312/559 (55%), Gaps = 6/559 (1%)
Query: 43 QLHAHIIKTGL-ETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQN 101
++HA +++TG E LL+ L N + + QVF+ W++L + +N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYAR-QVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
LP +L +++M +G+ PD+ P K+ + L G +LHA +K + VA
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
+ LV MY K GE+ A +F+ M +++V+W+ + VQ G AL F + + + V
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNK-MCADAV 206
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
+ FT+ S+L CG LE+G++I+ K D + V ++ + ++ KCG E A
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 282 AFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
FEE++ RN+ W+ M++ A + + LF M++ G++PN++TFL VL ACSHAG
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQN-EGLRPNYVTFLGVLSACSHAG 325
Query: 342 LVEKGQHYFELM--KKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWG 399
LV +G+ YF LM D +EP +HYA MVDLLGR+G L++A + I++MP+EP +WG
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 400 ALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQG 459
ALL C +H D L VAD + E +VLLSN +R G
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 460 IKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVG 519
KK S VE ++H F GD+SH ++ IY KL+E+ ++ K GYV DT V +V
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVE 505
Query: 520 GEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVR 579
EEK ++ +HSE+LAIAFGLI PIRVMKNLR C DCH KF+S +T +I+R
Sbjct: 506 MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMR 565
Query: 580 DNNRFHRFEDGKCTCGDYW 598
D NRFH F +G C+C ++W
Sbjct: 566 DKNRFHHFRNGVCSCKEFW 584
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 134/268 (50%), Gaps = 5/268 (1%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G LHAH++K G + +++ L+ Y K +S+ +F S + W++ ++ Q
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
+AL++F +M + D + + +C L S+ +G ++ A K ++ V
Sbjct: 188 TGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIV 247
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
++ +DM+ KCG AR +F+EM RNVVSWS MI GY G+ EAL LF + E
Sbjct: 248 ENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF-TTMQNEG 306
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT---SFDSSCFVASSLISLYSKCGAVE 277
+ N T VL C + L+ GK+ ++ + + + ++ L + G +E
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLE 366
Query: 278 GAYQAFEELQVR-NLGMWNAMLIACAQH 304
AY+ +++ V + G+W A+L ACA H
Sbjct: 367 EAYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/575 (37%), Positives = 309/575 (53%), Gaps = 21/575 (3%)
Query: 43 QLHAHIIKTGLETIP---LLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
QLHA ++T P L ++ S N + +VF+S + S+ W++LI + A
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA 125
Query: 100 QN-DLPHLALDFFRQMLRIG-LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ A +R+ML G PD H P K+CA + G +H +K + D
Sbjct: 126 HDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGD 185
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
V+V + L+ +Y CG + AR VFDEMP R++VSW+ MI V+ GE + AL+LF+++
Sbjct: 186 VYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-- 243
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF-KTSFDSS--CFVASSLISLYSKCG 274
+ + +T+ SVL C L LG H + K D + V +SLI +Y KCG
Sbjct: 244 QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM-KSVGGVKPNFITFLCV 333
++ A Q F+ +Q R+L WNAM++ A H F++M V+PN +TF+ +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
L AC+H G V KG+ YF++M +DY IEP +HY +VDL+ RAG + +A+ ++ MPM+P
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 394 TESVWGALLTGCRIHG-DTELASYVADRVF---EQGHVS----SGLNVLLSNXXXXXXXX 445
+W +LL C G EL+ +A + E S SG VLLS
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRW 483
Query: 446 XXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKA 505
K++ + GI+KE G S +E H F AGD SH +T +IY +L+ + D +
Sbjct: 484 NDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 543
Query: 506 GYVADTS--FVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHT 563
GY+ D S ++ K ++R HSERLAIAFGLI P + PIR+ KNLRVC DCH
Sbjct: 544 GYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHE 603
Query: 564 AIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
K ISK+ +IVRD RFH F+DG C+C DYW
Sbjct: 604 VTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%), Gaps = 19/297 (6%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G Q+H I+K G +++ LI+ Y + + +VF+ P RS +W+S+I + +
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA---YHLD 157
AL FR+M R PD + + + +CA L S+ +G HA L+ +D
Sbjct: 230 FGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
V V +SL++MY KCG + A VF M R++ SW+ MI G+ G EEA+ F +++
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 218 E-EDVGVNDFTLSSVLRVCGASTLLELGKQ-----IHGWCFKTSFDSSCFVASSLISLYS 271
+ E+V N T +L C + G+Q + +C + + + ++ L +
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEH----YGCIVDLIA 404
Query: 272 KCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQM-KSVGGVKPN 326
+ G + A + ++ + +W ++L AC + + EL E++ +++ G K +
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG---ASVELSEEIARNIIGTKED 458
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/580 (33%), Positives = 323/580 (55%), Gaps = 5/580 (0%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
NY T + L A +G LH ++ +GL ++ + L++ Y K + S +V
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS-- 138
P R W++LI +A+++ P AL F Q +R+ + ++I + S L
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSACLLPGDL 479
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+ G LHA + + D V +SL+ MYAKCG++ ++++F+ + +RN+++W+ M+
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
G EE L+L + + V ++ F+ S L +LE G+Q+HG K F+
Sbjct: 540 NAHHGHGEEVLKLVSK-MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
F+ ++ +YSKCG + + R+L WN ++ A +H + F +M
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
+G +KP +TF+ +L ACSH GLV+KG Y++++ +D+G+EP +H ++DLLGR+G+
Sbjct: 659 EMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 717
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNX 438
L +A I +MPM+P + VW +LL C+IHG+ + A+ + + + VL SN
Sbjct: 718 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 777
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
K + + IKK+ SWV+ ++V +F GDR+H +T+EIY KLE++
Sbjct: 778 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 837
Query: 499 GDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVC 558
+ ++GYVADTS L++ E+K + HSERLA+A+ L++ P+ +R+ KNLR+C
Sbjct: 838 KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRIC 897
Query: 559 GDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
DCH+ KF+S++ GR +++RD RFH FE G C+C DYW
Sbjct: 898 SDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 191/408 (46%), Gaps = 9/408 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ L L H + G +H ++K G +++ + + L+ Y+ + VF
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
P + +W+SL++SF + AL M+ G + +A +C
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 379
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G LH L + + + + ++LV MY K GE+ +R V +MP R+VV+W+ +I GY
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVC-GASTLLELGKQIHGWCFKTSFDSS 259
+ + ++AL F+ + V E V N T+ SVL C LLE GK +H + F+S
Sbjct: 440 EDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
V +SLI++Y+KCG + + F L RN+ WNAML A A H H +L +M+S
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
GV + +F L A + ++E+GQ L K G E S + D+ + G++
Sbjct: 559 F-GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEI 616
Query: 380 QDAVQVIEEMPMEPTESV--WGALLTGCRIHGDTELASYVADRVFEQG 425
+ V++ +P S+ W L++ HG E + E G
Sbjct: 617 GEVVKM---LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 661
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 184/386 (47%), Gaps = 6/386 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
R G+Q+H + K+GL + +S +++ Y L + S +VF P R+ +W+SL+
Sbjct: 75 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 134
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
++ P +D ++ M G+ +++ + SC L +G + +K+
Sbjct: 135 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 194
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ V +SL+ M G + YA +FD+M R+ +SW+ + Y Q G EE+ R+F +
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
D VN T+S++L V G + G+ IHG K FDS V ++L+ +Y+ G
Sbjct: 255 FHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A F+++ ++L WN+++ + + L M S G N++TF L AC
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-SGKSVNYVTFTSALAAC 372
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
EKG+ L+ G+ +V + G+ G++ ++ +V+ +MP +
Sbjct: 373 FTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA- 430
Query: 398 WGALLTGCRIHGDTE--LASYVADRV 421
W AL+ G D + LA++ RV
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRV 456
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 172/339 (50%), Gaps = 5/339 (1%)
Query: 66 FYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHI 125
Y+K + +F+ P R+ +W++++S + L ++FFR+M +G+ P +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 126 LPTAAKSCAALSSI-HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEM 184
+ + +C S+ G+ +H K+ DV+V+++++ +Y G + +R VF+EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 185 PHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG 244
P RNVVSW+ ++ GY GE EE + ++K + E VG N+ ++S V+ CG LG
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKG-MRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 245 KQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH 304
+QI G K+ +S V +SLIS+ G V+ A F+++ R+ WN++ A AQ+
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 305 AHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQ 364
H +F +F M+ + N T +L H + G+ L+ K G +
Sbjct: 240 GHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGFDSVVC 297
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
T++ + AG+ +A V ++MP + S W +L+
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMA 335
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 126/250 (50%), Gaps = 11/250 (4%)
Query: 167 MYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV--N 224
MY K G + AR++FD MP RN VSW+ M+ G V++G E + F+++ D+G+ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC---DLGIKPS 57
Query: 225 DFTLSSVLRVCGAS-TLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
F ++S++ CG S ++ G Q+HG+ K+ S +V+++++ LY G V + + F
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG-GVKPNFITFLCVLYACSHAGL 342
EE+ RN+ W ++++ + ++++ M+ G G N ++ V+ +C
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL--VISSCGLLKD 175
Query: 343 VEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
G+ + K G+E +++ +LG G + A + ++M T S W ++
Sbjct: 176 ESLGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIA 233
Query: 403 TGCRIHGDTE 412
+G E
Sbjct: 234 AAYAQNGHIE 243
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/560 (37%), Positives = 307/560 (54%), Gaps = 10/560 (1%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS--ATTWSSLISSF 98
G QLH H+ K G ET P + LI+ Y K L + +VF +P S + +++LIS +
Sbjct: 72 GQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGY 131
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
N A FR+M G+ D + C + +G SLH +K +V
Sbjct: 132 TANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
V +S + MY KCG + R +FDEMP + +++W+ +I GY Q G + L L++Q +
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQ-MKS 250
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
V + FTL SVL C ++G ++ F + FV+++ IS+Y++CG +
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAK 310
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A F+ + V++L W AM+ H LF+ M G++P+ F+ VL ACS
Sbjct: 311 ARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK-RGIRPDGAVFVMVLSACS 369
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
H+GL +KG F MK++Y +EPG +HY+ +VDLLGRAG+L +A++ IE MP+EP +VW
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
GALL C+IH + ++A +V E + G VL+SN M+R++
Sbjct: 430 GALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER 489
Query: 459 GIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEV 518
+K+ G S+VE RVH F AGDRSH +T E++ L+EL + + D
Sbjct: 490 AFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD------ 543
Query: 519 GGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIV 578
GEE + T R HSERLAIAFG++ I V+KNLRVC DCH +K +SKI R +V
Sbjct: 544 RGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVV 603
Query: 579 RDNNRFHRFEDGKCTCGDYW 598
RD +RFH F+DG C+C DYW
Sbjct: 604 RDASRFHYFKDGVCSCKDYW 623
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 6/341 (1%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
++T W+ + A L ++ +R MLR G PD P KSCA+LS G LH
Sbjct: 17 ASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLH 76
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVS--WSGMIYGYVQLGE 204
K + FV ++L+ MY KCG + AR VF+E P + +S ++ +I GY +
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
+A +F++ + E V V+ T+ ++ +C L LG+ +HG C K DS V +
Sbjct: 137 VTDAAYMFRR-MKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 265 SLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
S I++Y KCG+VE + F+E+ V+ L WNA++ +Q+ EL+EQMKS GV
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS-SGVC 254
Query: 325 PNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQ 384
P+ T + VL +C+H G + G +L++ + G P + + R G L A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARA 313
Query: 385 VIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
V + MP++ S W A++ +HG E+ + D + ++G
Sbjct: 314 VFDIMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 4/210 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L + H + + G ++ + G +S+ I+ Y++ + VF+
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
P +S +W+++I + + + + L F M++ G+ PD + +C+ GL
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 144 SLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
L A+K Y L+ S LVD+ + G + A + MP + G + G +
Sbjct: 379 ELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 202 LGEDEEALRL-FKQVLVEEDVGVNDFTLSS 230
+ ++ + L F +V+ E + + L S
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMS 467
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/464 (39%), Positives = 287/464 (61%), Gaps = 3/464 (0%)
Query: 136 LSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGM 195
++ + +G ++H++ +++ + ++V +SL+ +YA CG++ A VFD+MP +++V+W+ +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
I G+ + G+ EEAL L+ + + + + + FT+ S+L C L LGK++H + K
Sbjct: 61 INGFAENGKPEEALALYTE-MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
+ ++ L+ LY++CG VE A F+E+ +N W ++++ A + ELF+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGR 375
M+S G+ P ITF+ +LYACSH G+V++G YF M+++Y IEP +H+ MVDLL R
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 376 AGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLL 435
AG+++ A + I+ MPM+P +W LL C +HGD++LA + ++ + SG VLL
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLL 299
Query: 436 SNXXXXXXXXXXXXXXXK-MLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNK 494
SN K MLRD G+KK G S VE GNRVH F GD+SH ++ IY K
Sbjct: 300 SNMYASEQRWSDVQKIRKQMLRD-GVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 358
Query: 495 LEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKN 554
L+E+ + GYV S V +V EEK + YHSE++AIAF LI+ P+ PI V+KN
Sbjct: 359 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 418
Query: 555 LRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
LRVC DCH AIK +SK+ R ++VRD +RFH F++G C+C DYW
Sbjct: 419 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 142/275 (51%), Gaps = 6/275 (2%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
+R G +H+ +I++G ++ + + L++ Y+ S+ +VF+ P + W+S+I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
FA+N P AL + +M G+ PD + + +CA + ++ +G +H +K +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ ++ L+D+YA+CG + A+ +FDEM +N VSW+ +I G G +EA+ LFK +
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWC---FKTSFDSSCFVASSLISLYSKCG 274
E + + T +L C +++ G + +K F ++ L ++ G
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF--GCMVDLLARAG 241
Query: 275 AVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTN 308
V+ AY+ + + ++ N+ +W +L AC H ++
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
TI + L A +L G ++H ++IK GL S+ L++ Y++ + +F+
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAALSSIHVG 142
+++ +W+SLI A N A++ F+ M GLLP + +C+ + G
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
Query: 143 LSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGY 199
+ ++ Y ++ + +VD+ A+ G++ A MP + NVV W ++
Sbjct: 211 FE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 269
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSS 230
G+ + A Q+L E D+ L S
Sbjct: 270 TVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/577 (36%), Positives = 320/577 (55%), Gaps = 5/577 (0%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A H R L ++ +++K G + + LI+ Y+K ++ VFNS
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAA-LSSIHVG 142
+ +W+S+IS + Q+ A+ F+ M+ I DHI S + L+ + G
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM-IMEEQADHITYLMLISVSTRLADLKFG 427
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
LH+ +K+ +D+ V+++L+DMYAKCGE+G + +F M + V+W+ +I V+
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV 262
G+ L++ Q + + +V + T L +C + LGK+IH + ++S +
Sbjct: 488 GDFATGLQVTTQ-MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
++LI +YSKCG +E + + FE + R++ W M+ A + + E F M+ G
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK-SG 605
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
+ P+ + F+ ++YACSH+GLV++G FE MK Y I+P +HYA +VDLL R+ K+ A
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 665
Query: 383 VQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXX 442
+ I+ MP++P S+W ++L CR GD E A V+ R+ E G ++L SN
Sbjct: 666 EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAAL 725
Query: 443 XXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
K L+D+ I K G SW+E G VH F++GD S ++ IY LE L M
Sbjct: 726 RKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLM 785
Query: 503 AKAGYVADTSFVLKEV-GGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDC 561
AK GY+ D V + + EEK + I HSERLAIAFGL+ P++VMKNLRVCGDC
Sbjct: 786 AKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDC 845
Query: 562 HTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
H K ISKI GR ++VRD NRFH F+DG C+C D W
Sbjct: 846 HEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 202/381 (53%), Gaps = 6/381 (1%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS-SPHRSAT 89
AL+ S +L ++HA +I GL++ S LI+ YS + P SSL VF SP ++
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
W+S+I +F++N L AL+F+ ++ + PD + P+ K+CA L +G ++
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEAL 209
L + D+FV ++LVDMY++ G + AR VFDEMP R++VSW+ +I GY G EEAL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
++ + L + + FT+SSVL G +++ G+ +HG+ K+ +S V + L+++
Sbjct: 193 EIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 270 YSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
Y K A + F+E+ VR+ +N M+ + + +F ++++ KP+ +T
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLT 309
Query: 330 FLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
VL AC H + ++ + M K G S ++D+ + G + A V M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLK-AGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 390 PMEPTESVWGALLTGCRIHGD 410
+ T S W ++++G GD
Sbjct: 369 ECKDTVS-WNSIISGYIQSGD 388
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 198/391 (50%), Gaps = 5/391 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A + +++G LH +K+G+ ++ ++++ L+ Y K + P + +VF+
Sbjct: 209 TVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEM 268
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R + +++++I + + ++ ++ F + L PD + + ++C L + +
Sbjct: 269 DVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAK 327
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
++ LK + L+ V + L+D+YAKCG++ AR+VF+ M ++ VSW+ +I GY+Q G
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
+ EA++LFK +++ E+ + T ++ V L+ GK +H K+ V+
Sbjct: 388 DLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
++LI +Y+KCG V + + F + + WN ++ AC + ++ QM+ V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK-SEV 505
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
P+ TFL L C+ G+ + + +G E Q ++++ + G L+++
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSS 564
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
+V E M + W ++ ++G+ E A
Sbjct: 565 RVFERMSRRDVVT-WTGMIYAYGMYGEGEKA 594
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 5/229 (2%)
Query: 127 PTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEM-P 185
P +++ ++ S+++ +HAL + F + L+D Y+ E + +VF + P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
+NV W+ +I + + G EAL + + L E V + +T SV++ C E+G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGK-LRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHA 305
++ F+S FV ++L+ +YS+ G + A Q F+E+ VR+L WN+++ + H
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HYFEL 352
+ E++ ++K+ + P+ T VL A + +V++GQ H F L
Sbjct: 187 YYEEALEIYHELKN-SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ-VR 289
+ R +S+ L ++IH DSS F + LI YS + F + +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHY 349
N+ +WN+++ A +++ E + +++ V P+ TF V+ AC+ E G
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRE-SKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 350 FELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
+E + D G E +VD+ R G L A QV +EMP+ S W +L++G HG
Sbjct: 129 YEQI-LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLISGYSSHG 186
Query: 410 DTELA 414
E A
Sbjct: 187 YYEEA 191
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/607 (33%), Positives = 323/607 (53%), Gaps = 34/607 (5%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKT-----------QL 72
T CN + + +R+L G ++H HI +G ++ + L+ Y+K ++
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 73 PNSSL--------------------QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFR 112
PN L ++F+ + + +W+++++ + + D P AL +
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 113 QMLRI-GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKC 171
M R+ P+ + A + AA+ I G +H ++ D + SSL+DMY KC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 172 GEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSV 231
G I ARN+FD++ ++VVSW+ MI Y + E LF + LV N++T + V
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE-LVGSCERPNEYTFAGV 325
Query: 232 LRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNL 291
L C T ELGKQ+HG+ + FD F +SSL+ +Y+KCG +E A + +L
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 292 GMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFE 351
W +++ CAQ+ + + F+ + G KP+ +TF+ VL AC+HAGLVEKG +F
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLK-SGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 352 LMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDT 411
+ + + + S HY +VDLL R+G+ + VI EMPM+P++ +W ++L GC +G+
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 412 ELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEE 471
+LA A +F+ + V ++N K +++ G+ K G SW E
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Query: 472 GNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHS 531
+ H F A D SH +I L EL +M + GYV TS VL +V E+K + + YHS
Sbjct: 565 KRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 624
Query: 532 ERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGK 591
E+LA+AF +++ + I+V KNLR C DCH AIKFIS IT R + VRD+ RFH FE+G+
Sbjct: 625 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQ 684
Query: 592 CTCGDYW 598
C+CGDYW
Sbjct: 685 CSCGDYW 691
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/584 (35%), Positives = 327/584 (55%), Gaps = 13/584 (2%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNS---SLQVF 80
T+ + A +L G QLH+ I++GL + + L++ Y+K S +VF
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVF 328
Query: 81 NSSPHRSATTWSSLISSFAQN-DLPHLALDFFRQMLRIG-LLPDDHILPTAAKSCAALSS 138
+ S +W++LI+ + +N +L A++ F +M+ G + P+ +A K+C LS
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
VG + A K + VA+S++ M+ K + A+ F+ + +N+VS++ + G
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
+ E+A +L ++ E ++GV+ FT +S+L + G+QIH K
Sbjct: 449 TCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
+ V ++LIS+YSKCG+++ A + F ++ RN+ W +M+ A+H R E F QM
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
GVKPN +T++ +L ACSH GLV +G +F M +D+ I+P +HYA MVDLL RAG
Sbjct: 568 E-EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNX 438
L DA + I MP + VW L CR+H +TEL A ++ E + LSN
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNI 686
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
+ ++++ + KE G SW+E G+++H F GD +H +IY++L+ L
Sbjct: 687 YACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
Query: 499 GDEMAKAGYVADTSFVLKEV----GGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKN 554
E+ + GYV DT VL ++ EK + + HSE++A+AFGLI+ + RP+RV KN
Sbjct: 747 ITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKN 806
Query: 555 LRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
LRVCGDCH A+K+IS ++GR +++RD NRFH F+DGKC+C DYW
Sbjct: 807 LRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 190/395 (48%), Gaps = 19/395 (4%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T + L + +R R G +HA +I+ +E +L + LI+ YSK+ + VF +
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 84 PH---RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
R +WS++++ + N A+ F + L +GL+P+D+ ++C+ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 141 VGLSLHALALKTA-YHLDVFVASSLVDMYAKCGEIGY--ARNVFDEMPHRNVVSWSGMIY 197
VG +KT + DV V SL+DM+ K GE + A VFD+M NVV+W+ MI
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 198 GYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
+Q+G EA+R F +V + FTLSSV C L LGKQ+H W ++
Sbjct: 243 RCMQMGFPREAIRFFLD-MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301
Query: 258 SSCFVASSLISLYSKC---GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAH-TNRTFEL 313
V SL+ +Y+KC G+V+ + F+ ++ ++ W A++ ++ + L
Sbjct: 302 DD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINL 359
Query: 314 FEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF-ELMKKDYGIEPGSQHYATMVDL 372
F +M + G V+PN TF AC + G+ + K+ G+ S +++ +
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR--GLASNSSVANSVISM 417
Query: 373 LGRAGKLQDAVQVIEEMPMEPTESVWGALLTG-CR 406
++ +++DA + E + E + L G CR
Sbjct: 418 FVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 182/369 (49%), Gaps = 13/369 (3%)
Query: 48 IIKTG-LETIPLLSHHLINFYSKTQLP-NSSLQVFNSSPHRSATTWSSLISSFAQNDLPH 105
++KTG E+ + LI+ + K + ++ +VF+ + TW+ +I+ Q P
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 106 LALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLV 165
A+ FF M+ G D L + +CA L ++ +G LH+ A+++ D V SLV
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLV 309
Query: 166 DMYAKC---GEIGYARNVFDEMPHRNVVSWSGMIYGYVQ-LGEDEEALRLFKQVLVEEDV 221
DMYAKC G + R VFD M +V+SW+ +I GY++ EA+ LF +++ + V
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
N FT SS + CG + +GKQ+ G FK S+ VA+S+IS++ K +E A +
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 282 AFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG-GVKPNFITFLCVLYACSHA 340
AFE L +NL +N L ++ + + F+L ++ GV TF +L ++
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA--FTFASLLSGVANV 487
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
G + KG+ + K G+ ++ + + G + A +V M S W +
Sbjct: 488 GSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS-WTS 545
Query: 401 LLTGCRIHG 409
++TG HG
Sbjct: 546 MITGFAKHG 554
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
++ T SS+L+ C + LGK +H + + + +SLISLYSK G A
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 283 FEELQ---VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSH 339
FE ++ R++ W+AM+ + ++F + +G V PN + V+ ACS+
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-PNDYCYTAVIRACSN 178
Query: 340 AGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA-GKLQDAVQVIEEMPMEPTESVW 398
+ V G+ + K E +++D+ + ++A +V ++M E W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTW 237
Query: 399 GALLTGCRIHG 409
++T C G
Sbjct: 238 TLMITRCMQMG 248
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/526 (37%), Positives = 291/526 (55%), Gaps = 5/526 (0%)
Query: 74 NSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSC 133
+ +L++F P ++ +W+++I QN+ ALD F+ MLR + +C
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 134 AALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWS 193
A + H+G+ +H L +K + + +V++SL+ YA C IG +R VFDE H V W+
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 194 GMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFK 253
++ GY + E+AL +F +L + N T +S L C A L+ GK++HG K
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGML-RNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFEL 313
++ FV +SL+ +YS G V A F ++ +++ WN++++ CAQH F +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 314 FEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYG-IEPGSQHYATMVDL 372
F QM + +P+ ITF +L ACSH G +EKG+ F M I+ QHY MVD+
Sbjct: 415 FGQMIRLNK-EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 373 LGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN 432
LGR GKL++A ++IE M ++P E VW ALL+ CR+H D + A +F SS
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 433 VLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIY 492
VLLSN ++ GI K+ G SWV + H F +GD+ H IY
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS--RIY 591
Query: 493 NKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVM 552
KLE L +++ + GY D L +V E+K + + YHSERLAIAFGLI + + VM
Sbjct: 592 EKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVM 651
Query: 553 KNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
KNLRVC DCHT IK IS + GR +++RD RFH F++G C+CGDYW
Sbjct: 652 KNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 4/284 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
+ A ++ + G+Q+H IIK G +S LI FY+ + S +VF+ H
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
W++L+S ++ N AL F MLR +LP+ + SC+AL ++ G +H +
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
A+K D FV +SLV MY+ G + A +VF ++ +++VSW+ +I G Q G + A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFK--TSFDSSCFVASSL 266
+F Q ++ + ++ T + +L C LE G+++ + D + +
Sbjct: 412 FVIFGQ-MIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCM 470
Query: 267 ISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNR 309
+ + +CG ++ A + E + V+ N +W A+L AC H+ +R
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDR 514
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 175/393 (44%), Gaps = 26/393 (6%)
Query: 25 ICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSP 84
ICNHLL SR + ++ + + L +I Y+++ +L +F+ P
Sbjct: 42 ICNHLL----SRRIDEAREVFNQVPSPHVS----LYTKMITGYTRSNRLVDALNLFDEMP 93
Query: 85 HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS 144
R +W+S+IS + + A+ F +M P+ ++ A S V +
Sbjct: 94 VRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGCFRSGKVDQA 147
Query: 145 ---LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
+ + +K D +S+V Y + G++ A +F +MP +NV+SW+ MI G Q
Sbjct: 148 ERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQ 202
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
EAL LFK +L + + V+ C + +G Q+HG K F +
Sbjct: 203 NERSGEALDLFKNML-RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
V++SLI+ Y+ C + + + F+E + +W A+L + + +F M
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR-N 320
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
+ PN TF L +CS G ++ G+ + K G+E + ++V + +G + D
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVND 379
Query: 382 AVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
AV V ++ + S W +++ GC HG + A
Sbjct: 380 AVSVFIKIFKKSIVS-WNSIIVGCAQHGRGKWA 411
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 18/281 (6%)
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
V + + ++ Y + + A N+FDEMP R+VVSW+ MI G V+ G+ A++LF + +
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDE-MP 124
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
E V + ++++ C S ++ +++ F +S++ Y + G V+
Sbjct: 125 ERSV----VSWTAMVNGCFRSGKVDQAERL----FYQMPVKDTAAWNSMVHGYLQFGKVD 176
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + F+++ +N+ W M+ Q+ + +LF+ M +K F CV+ AC
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC-CIKSTSRPFTCVITAC 235
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
++A G L+ K G A+++ ++ D+ +V +E E +V
Sbjct: 236 ANAPAFHMGIQVHGLIIK-LGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV-AV 293
Query: 398 WGALLTGCRIHGDTELASYVADRVFE------QGHVSSGLN 432
W ALL+G ++ E A + + Q +SGLN
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + L + + +L G ++H +K GLET + + L+ YS + N ++ VF
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+S +W+S+I AQ+ A F QM+R+ PD+ +C+ +
Sbjct: 385 IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLE 444
Query: 141 VGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIY 197
G L H+D + + +VD+ +CG++ A +E+ R VV + M++
Sbjct: 445 KGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEA----EELIERMVVKPNEMVW 499
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/567 (34%), Positives = 322/567 (56%), Gaps = 6/567 (1%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
+S+R +++ ++ G E + + ++ + K + + ++F+ P R+ ++ S+I
Sbjct: 137 KSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSII 196
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
S F A + F+ M + H ++ A L SI+VG LH ALK
Sbjct: 197 SGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVV 256
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
+ FV+ L+DMY+KCG+I AR F+ MP + V+W+ +I GY G EEAL L
Sbjct: 257 DNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYD- 315
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
+ + V ++ FTLS ++R+ LEL KQ H + F+S ++L+ YSK G
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGR 375
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
V+ A F++L +N+ WNA++ A H +LFE+M + V PN +TFL VL
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA-ANVAPNHVTFLAVLS 434
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
AC+++GL E+G F M + +GI+P + HYA M++LLGR G L +A+ I P++ T
Sbjct: 435 ACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTV 494
Query: 396 SVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKML 455
++W ALL CR+ + EL VA++++ G G V++ N + L
Sbjct: 495 NMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETL 554
Query: 456 RDQGIKKETGLSWVEEGNRVHTFAAGDR--SHAKTV--EIYNKLEELGDEMAKAGYVADT 511
+G+ +WVE G++ H+F +GDR S+ +TV +IY K++EL +E+++ GY +
Sbjct: 555 ESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEE 614
Query: 512 SFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKI 571
+L +V +E+ + RYHSE+LAIA+GL+ P+ P+++ +N R+C +CH ++FIS +
Sbjct: 615 QHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLV 674
Query: 572 TGRVLIVRDNNRFHRFEDGKCTCGDYW 598
TGR ++VRD +RFH F++GKC+CG YW
Sbjct: 675 TGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 155/347 (44%), Gaps = 14/347 (4%)
Query: 69 KTQLPNSSLQVFNSSP-HRSATTWSSLISSFAQNDLPHLALDFF-----RQMLRIGLLPD 122
+ ++ S Q+ + + +S T S I + A + F R ++G+
Sbjct: 67 RIEVKESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTY 126
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
D ++ ++C L SI ++ + + + ++ + ++ M+ KCG I AR +FD
Sbjct: 127 DALV----EACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFD 182
Query: 183 EMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLE 242
E+P RN+ S+ +I G+V G EA LFK ++ EE T + +LR +
Sbjct: 183 EIPERNLYSYYSIISGFVNFGNYVEAFELFK-MMWEELSDCETHTFAVMLRASAGLGSIY 241
Query: 243 LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACA 302
+GKQ+H K + FV+ LI +YSKCG +E A AFE + + WN ++ A
Sbjct: 242 VGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYA 301
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPG 362
H ++ L M+ G F + + + A L Q + L++ G E
Sbjct: 302 LHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN--GFESE 359
Query: 363 SQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
+VD + G++ A V +++P + S W AL+ G HG
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS-WNALMGGYANHG 405
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
EA LF+ + + V T +++ C + K+++G+ F+ ++ + +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM-KSVGGVKP 325
+ ++ KCG + A + F+E+ RNL + +++ + FELF+ M + + +
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 326 NFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQV 385
+ TF +L A + G + G+ + G+ + ++D+ + G ++DA
Sbjct: 225 H--TFAVMLRASAGLGSIYVGKQ-LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 386 IEEMPMEPTESVWGALLTGCRIHGDTELA 414
E MP E T W ++ G +HG +E A
Sbjct: 282 FECMP-EKTTVAWNNVIAGYALHGYSEEA 309
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/586 (35%), Positives = 320/586 (54%), Gaps = 10/586 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T +L A +L +GLQ+H +K G E + + + L++ YSK N + +VF
Sbjct: 106 NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVF 165
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQM--LRIGLLPDDHILPTAAKSCAALSS 138
RS +W+++I+ F ALD F M I PD+ L + K+C++
Sbjct: 166 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 225
Query: 139 IHVGLSLHALALKTAYHL--DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMI 196
I+ G +H +++ +H + SLVD+Y KCG + AR FD++ + ++SWS +I
Sbjct: 226 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 285
Query: 197 YGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF 256
GY Q GE EA+ LFK+ L E + ++ F LSS++ V LL GKQ+ K
Sbjct: 286 LGYAQEGEFVEAMGLFKR-LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPS 344
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQ 316
V +S++ +Y KCG V+ A + F E+Q++++ W ++ +H ++ +F +
Sbjct: 345 GLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYE 404
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
M ++P+ + +L VL ACSH+G++++G+ F + + +GI+P +HYA +VDLLGRA
Sbjct: 405 MLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 463
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
G+L++A +I+ MP++P +W LL+ CR+HGD EL V + + V++S
Sbjct: 464 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523
Query: 437 NXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLE 496
N ++ +G+KKE G+SWVE VH F +G+ SH T I L+
Sbjct: 524 NLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLK 583
Query: 497 ELGDEMAKA-GYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLIT---FPQERPIRVM 552
E + + GYV L ++ E K + +R HSE+LAI L T + + IRV
Sbjct: 584 EAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVF 643
Query: 553 KNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
KNLRVC DCH IK +SKIT +VRD RFH FEDG C+CGDYW
Sbjct: 644 KNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 208/375 (55%), Gaps = 10/375 (2%)
Query: 40 RGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
+G Q+H +++K+G + S++LI+ Y K + P + +VF+S P R+ +WS+L+S
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
N +L F +M R G+ P++ T K+C L+++ GL +H LK + + V
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
V +SLVDMY+KCG I A VF + R+++SW+ MI G+V G +AL F ++ E
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG-MMQEA 202
Query: 220 DVG--VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF--DSSCFVASSLISLYSKCGA 275
++ ++FTL+S+L+ C ++ ++ GKQIHG+ ++ F SS + SL+ LY KCG
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
+ A +AF++++ + + W+++++ AQ LF++++ + +F ++
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSF-ALSSIIG 321
Query: 336 ACSHAGLVEKGQHYFEL-MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
+ L+ +G+ L +K G+E + ++VD+ + G + +A + EM ++
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGLETSVLN--SVVDMYLKCGLVDEAEKCFAEMQLKDV 379
Query: 395 ESVWGALLTGCRIHG 409
S W ++TG HG
Sbjct: 380 IS-WTVVITGYGKHG 393
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 3/178 (1%)
Query: 227 TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
L S+LRVC L + G Q+H + K+ + ++ LI +Y KC AY+ F+ +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 287 QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG 346
RN+ W+A++ + + LF +M G+ PN TF L AC +EKG
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR-QGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 347 QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
K G E + ++VD+ + G++ +A +V + ++ + W A++ G
Sbjct: 127 LQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 295/545 (54%), Gaps = 37/545 (6%)
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+W+ ++S F ++ A+ F+++ +G PD + + S +++G +H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEI-----------------------GYARN------ 179
+K D V S+++DMY K G + G +RN
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 180 -----VFDEMPHR-NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLR 233
+F E NVVSW+ +I G Q G+D EAL LF+++ V V N T+ S+L
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLP 396
Query: 234 VCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGM 293
CG L G+ HG+ + + V S+LI +Y+KCG + + F + +NL
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 294 WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELM 353
WN+++ + H +FE + +KP+FI+F +L AC GL ++G YF++M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTR-LKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 354 KKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTEL 413
++YGI+P +HY+ MV+LLGRAGKLQ+A +I+EMP EP VWGALL CR+ + +L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 414 ASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGN 473
A A+++F + G VLLSN + G+KK G SW++ N
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 474 RVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSER 533
RV+T AGD+SH + +I K++E+ EM K+G+ + F L +V +E+ Q + HSE+
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 534 LAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCT 593
LA+ FGL+ P P++V+KNLR+CGDCH IKFIS GR + +RD NRFH F+DG C+
Sbjct: 696 LAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 594 CGDYW 598
CGD+W
Sbjct: 756 CGDFW 760
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 196/443 (44%), Gaps = 80/443 (18%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
Q HA I+K+G + +S LI YS N + V S P + ++SSLI + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
L ++ F +M GL+PD H+LP K CA LS+ VG +H ++ + +D FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHR----------------------------------- 187
S+ MY +CG +G AR VFD M +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 188 NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGK 245
N+VSW+G++ G+ + G +EA+ +F+++ +G + T+SSVL G S +L +G+
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKI---HHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGM------------ 293
IHG+ K V S++I +Y K G V G F + ++ G+
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 294 -----------------------WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
W +++ CAQ+ ELF +M+ V GVKPN +T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ-VAGVKPNHVTI 391
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYAT-MVDLLGRAGKLQDAVQVIEEM 389
+L AC + + G+ + + ++ + H + ++D+ + G++ + V M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLD--NVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 390 PMEPTESVWGALLTGCRIHGDTE 412
P + W +L+ G +HG +
Sbjct: 450 PTK-NLVCWNSLMNGFSMHGKAK 471
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/610 (31%), Positives = 323/610 (52%), Gaps = 45/610 (7%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A++ +L G++LH K P + ++ Y+ N + VF+ HR
Sbjct: 118 LKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV 177
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
TW+++I + + L A F +M ++PD+ IL +C ++ +++
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 237
Query: 149 ALKTAYHLD-------------------------------VFVASSLVDMYAKCGEIGYA 177
++ +D +FV++++V Y+KCG + A
Sbjct: 238 LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDA 297
Query: 178 RNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL---VEEDVGVNDFTLSSVLRV 234
+ +FD+ +++V W+ MI YV+ +EALR+F+++ ++ DV ++ SV+
Sbjct: 298 QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV----VSMFSVISA 353
Query: 235 CGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMW 294
C +L+ K +H +S + ++LI++Y+KCG ++ FE++ RN+ W
Sbjct: 354 CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSW 413
Query: 295 NAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMK 354
++M+ A + H + LF +MK V+PN +TF+ VLY CSH+GLVE+G+ F M
Sbjct: 414 SSMINALSMHGEASDALSLFARMKQ-ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT 472
Query: 355 KDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
+Y I P +HY MVDL GRA L++A++VIE MP+ +WG+L++ CRIHG+ EL
Sbjct: 473 DEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELG 532
Query: 415 SYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNR 474
+ A R+ E G VL+SN +++ ++ + KE GLS +++ +
Sbjct: 533 KFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGK 592
Query: 475 VHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERL 534
H F GD+ H ++ EIY KL+E+ ++ AGYV D VL +V EEK + +HSE+L
Sbjct: 593 SHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKL 652
Query: 535 AIAFGLITFPQERP------IRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFE 588
A+ FGL+ +E IR++KNLRVC DCH K +SK+ R +IVRD RFH ++
Sbjct: 653 ALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYK 712
Query: 589 DGKCTCGDYW 598
+G C+C DYW
Sbjct: 713 NGLCSCRDYW 722
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 206/421 (48%), Gaps = 48/421 (11%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFY------SKTQLPNSSLQVFNS 82
L L+ +SL QLHAHI++T +++H L +F S + + +L VF+S
Sbjct: 16 LEKLSFCKSLNHIKQLHAHILRT------VINHKLNSFLFNLSVSSSSINLSYALNVFSS 69
Query: 83 SPHR-SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHV 141
P + ++ + +++ P + F++++ +G D K+ + +S++
Sbjct: 70 IPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
G+ LH +A K A D FV + +DMYA CG I YARNVFDEM HR+VV+W+ MI Y +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWC---------- 251
G +EA +LF++ + + +V ++ L +++ CG + + + I+ +
Sbjct: 190 FGLVDEAFKLFEE-MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 252 ---------------------FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRN 290
F+ + FV+++++S YSKCG ++ A F++ + ++
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
L W M+ A + + +FE+M G+KP+ ++ V+ AC++ G+++K +
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEM-CCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 351 ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGD 410
+ + G+E ++++ + G L V E+MP S W +++ +HG+
Sbjct: 368 SCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALSMHGE 425
Query: 411 T 411
Sbjct: 426 A 426
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/595 (32%), Positives = 321/595 (53%), Gaps = 45/595 (7%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKT------QLPNSSLQVFNSSPHRSATTWSSLIS 96
Q+HA + G L HL+ + K + + + Q+ + S + +S+I
Sbjct: 24 QIHAKLYVDG----TLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIR 79
Query: 97 SFAQNDLPHLALDFFRQMLRIG--LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
+ ++ +P + DF+R++L G L PD++ + ++C L GL +H + ++ +
Sbjct: 80 AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 155 HLDVFVASSLVDMYA-------------------------------KCGEIGYARNVFDE 183
D V + L+ +YA +CG++ +AR +F+
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 184 MPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLEL 243
MP R+ ++W+ MI GY Q+GE EAL +F ++ E V VN + SVL C L+
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVF-HLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 244 GKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQ 303
G+ H + + + +A++L+ LY+KCG +E A + F ++ +N+ W++ L A
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 304 HAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGS 363
+ + ELF MK GV PN +TF+ VL CS G V++GQ +F+ M+ ++GIEP
Sbjct: 319 NGFGEKCLELFSLMKQ-DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 364 QHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFE 423
+HY +VDL RAG+L+DAV +I++MPM+P +VW +LL R++ + EL + ++ E
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLE 437
Query: 424 QGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDR 483
+ G VLLSN + ++ +G++K+ G S +E VH F GD+
Sbjct: 438 LETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDK 497
Query: 484 SHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITF 543
SH K +I +++ + AGY ADT+ V+ ++ EEK + HSE+ AIAFG+++
Sbjct: 498 SHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSL 557
Query: 544 PQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
++ PIR++KNLRVCGDCH ISKI R +IVRD NRFH F+DG C+C +W
Sbjct: 558 KEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A T +L +G H++I + ++ L+ L++ Y+K +++VF ++
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
TWSS ++ A N L+ F M + G+ P+ + + C+ + + G H
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFD 365
Query: 149 ALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYG 198
+++ + ++ + LVD+YA+ G + A ++ +MP + + WS +++
Sbjct: 366 SMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/611 (34%), Positives = 322/611 (52%), Gaps = 49/611 (8%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIP--LLSHHLINFYSKTQLPNSSLQVFNSSP--HRSA 88
H LR G +LHA + +GL+ P LS+ L FY+ + ++ ++F+ P +
Sbjct: 17 AHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDN 76
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
W++L+SSF++ L ++ F +M R + DD + CA L + H +
Sbjct: 77 VDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGV 136
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIG-------------------------------YA 177
A+K V V ++L+DMY KCG +
Sbjct: 137 AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 178 RNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA 237
R VF EMP RN V+W+ M+ GY+ G E L L +++ G+N TL S+L C
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 238 STLLELGKQIHGWCFK--------TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVR 289
S L +G+ +H + K S+D V ++L+ +Y+KCG ++ + F ++ R
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDD-VMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHY 349
N+ WNA+ A H ++F QM + VKP+ +TF VL ACSH+G+V++G
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQM--IREVKPDDLTFTAVLSACSHSGIVDEGWRC 373
Query: 350 FELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
F ++ YG+EP HYA MVDLLGRAG +++A ++ EMP+ P E V G+LL C +HG
Sbjct: 374 FHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG 432
Query: 410 DTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWV 469
E+A + + + ++ +L+SN LR +GI+K GLS +
Sbjct: 433 KVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Query: 470 EEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGG--EEKNQTI 527
+ VH F++GDRSH +T EIY KL E+ + + AGYV D S ++ G EEK Q +
Sbjct: 493 YVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQAL 552
Query: 528 RYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRF 587
HSE+LA+ FGL+ P+ V KNLR+C DCH+A+K +SK+ R +I+RD NRFH+F
Sbjct: 553 CCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQF 612
Query: 588 EDGKCTCGDYW 598
+ G C+C DYW
Sbjct: 613 KGGSCSCSDYW 623
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 47/327 (14%)
Query: 131 KSCAALSSIHVGLSLHAL----ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP- 185
+ CA S + G LHA+ LK A +++++L YA GE+ A+ +FDE+P
Sbjct: 14 RHCAHRSFLRPGKELHAVLTTSGLKKAPR--SYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 186 -HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG 244
++ V W+ ++ + + G +++LF + + + V ++D ++ + VC L
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVE-MRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 245 KQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH 304
+Q HG K +S V ++L+ +Y KCG V + FEEL+ +++ W +L +
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 305 AHTNRTFELFEQMKSVGGVK-------------------------------PNFITFLCV 333
R E+F +M V NF+T +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 334 LYACSHAG--LVEKGQHYFELMKKDYGIEPGSQHYA----TMVDLLGRAGKLQDAVQVIE 387
L AC+ +G +V + H + L K+ E S +VD+ + G + ++ V
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 388 EMPMEPTESVWGALLTGCRIHGDTELA 414
M + W AL +G +HG +
Sbjct: 311 LMRKRNVVT-WNALFSGLAMHGKGRMV 336
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 20/178 (11%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHH-------LINFYSKTQLP 73
N+ T+C+ L A S +L G +H + +K + S+ L++ Y+K
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
Query: 74 NSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSC 133
+SS+ VF R+ TW++L S A + + +D F QM+R + PDD +C
Sbjct: 303 DSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSAC 361
Query: 134 AALSSIHVG------LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
+ + G L + L K ++ + +VD+ + G I A + EMP
Sbjct: 362 SHSGIVDEGWRCFHSLRFYGLEPKVDHY------ACMVDLLGRAGLIEEAEILMREMP 413
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/581 (35%), Positives = 318/581 (54%), Gaps = 8/581 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L + + + G Q+H +K G++ +S+ L+ Y++T N ++F+S
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 84 PHRSATTWSSLISSFAQND--LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHV 141
P +W+S+I + A+++ LP + F R G + + + ++LS +
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ-RAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGYV 200
G +H LALK + ++L+ Y KCGE+ +F M R + V+W+ MI GY+
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+AL L +++ ++ F ++VL + LE G ++H + +S
Sbjct: 596 HNELLAKALDLV-WFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
V S+L+ +YSKCG ++ A + F + VRN WN+M+ A+H +LFE MK
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 321 GGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
G P+ +TF+ VL ACSHAGL+E+G +FE M YG+ P +H++ M D+LGRAG+L
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774
Query: 381 DAVQVIEEMPMEPTESVWGALLTG-CRIHG-DTELASYVADRVFEQGHVSSGLNVLLSNX 438
IE+MPM+P +W +L CR +G EL A+ +F+ ++ VLL N
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 834
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
K ++D +KKE G SWV + VH F AGD+SH IY KL+EL
Sbjct: 835 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 894
Query: 499 GDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQER-PIRVMKNLRV 557
+M AGYV T F L ++ E K + + YHSE+LA+AF L PIR+MKNLRV
Sbjct: 895 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 954
Query: 558 CGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
CGDCH+A K+ISKI GR +I+RD+NRFH F+DG C+C D+W
Sbjct: 955 CGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 191/390 (48%), Gaps = 13/390 (3%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLETIPL-LSHHLINFYSKTQLPNSSLQVFNSSPHRSAT 89
+L L++G ++H H+I TGL + + + L+N Y+K + +VF + +
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
+W+S+I+ QN A++ ++ M R +LP L ++ SCA+L +G +H +
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGES 441
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE--E 207
LK L+V V+++L+ +YA+ G + R +F MP + VSW+ +I G + E E
Sbjct: 442 LKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALARSERSLPE 500
Query: 208 ALRLFKQVLVEEDVG--VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASS 265
A+ F L + G +N T SSVL + + ELGKQIHG K + ++
Sbjct: 501 AVVCF---LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENA 557
Query: 266 LISLYSKCGAVEGAYQAFEEL-QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
LI+ Y KCG ++G + F + + R+ WN+M+ + + +L M G
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617
Query: 325 PNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQ 384
+F+ + VL A + +E+G + +E + +VD+ + G+L A++
Sbjct: 618 DSFM-YATVLSAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYALR 675
Query: 385 VIEEMPMEPTESVWGALLTGCRIHGDTELA 414
MP+ + S W ++++G HG E A
Sbjct: 676 FFNTMPVRNSYS-WNSMISGYARHGQGEEA 704
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 188/380 (49%), Gaps = 22/380 (5%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
H+ + K L+ L ++LIN Y +T S+ +VF+ P R+ +W+ ++S +++N
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHV--GLSLHALALKTAYHLDVFVA 161
AL F R M++ G+ + + + ++C + S+ + G +H L K +Y +D V+
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 162 SSLVDMYAKC-GEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
+ L+ MY KC G +GYA F ++ +N VSW+ +I Y Q G+ A R+F + +
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 221 VGVNDFTLSSVLRVCGASTLLE----LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
++T S+ V A +L E L +QI K+ + FV S L+S ++K G++
Sbjct: 203 RPT-EYTFGSL--VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP-NFITFLCVL- 334
A + F +++ RN N +++ + +LF M S+ V P +++ L
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 335 -YACSHAGLVEKGQ----HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
Y+ + ++KG+ H D+ + G+ +V++ + G + DA +V M
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN----GLVNMYAKCGSIADARRVFYFM 375
Query: 390 PMEPTESVWGALLTGCRIHG 409
+ + S W +++TG +G
Sbjct: 376 TDKDSVS-WNSMITGLDQNG 394
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 169/370 (45%), Gaps = 12/370 (3%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSK-TQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
G Q+H + K ++S+ LI+ Y K +L F +++ +W+S+IS ++
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL--SLHALALKTAYHLD 157
Q A F M G P ++ + + +L+ V L + K+ D
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+FV S LV +AK G + YAR VF++M RN V+ +G++ G V+ EEA +LF +
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 218 EEDVGVNDFT--LSSVLRVCGASTL-LELGKQIHGWCFKTSF-DSSCFVASSLISLYSKC 273
DV + LSS A + L+ G+++HG T D + + L+++Y+KC
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G++ A + F + ++ WN+M+ Q+ E ++ M+ + P T +
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISS 421
Query: 334 LYACSHAGLVEKGQH-YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
L +C+ + GQ + E +K GI+ ++ L G L + ++ MP E
Sbjct: 422 LSSCASLKWAKLGQQIHGESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-E 478
Query: 393 PTESVWGALL 402
+ W +++
Sbjct: 479 HDQVSWNSII 488
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/619 (34%), Positives = 327/619 (52%), Gaps = 54/619 (8%)
Query: 32 LTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSL----QVFNSSPHRS 87
+ + R++R Q+HA IK+G L + ++ F + + L + L ++FN P R+
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 88 ATTWSSLISSFAQNDLPH--LALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLS 144
+W+++I F+++D +A+ F +M+ + P+ P+ K+CA I G
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCG-----------------------------EI- 174
+H LALK + D FV S+LV MY CG EI
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 175 -------GY--------ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
GY AR +FD+M R+VVSW+ MI GY G ++A+ +F++ + +
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE-MKKG 268
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
D+ N TL SVL LELG+ +H + + + S+LI +YSKCG +E A
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSH 339
FE L N+ W+AM+ A H + F +M+ GV+P+ + ++ +L ACSH
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ-AGVRPSDVAYINLLTACSH 387
Query: 340 AGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWG 399
GLVE+G+ YF M G+EP +HY MVDLLGR+G L +A + I MP++P + +W
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 400 ALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQG 459
ALL CR+ G+ E+ VA+ + + SG V LSN ++++
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 460 IKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVG 519
I+K+ G S ++ +H F D SH K EI + L E+ D++ AGY T+ VL +
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 567
Query: 520 GEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVR 579
E+K + YHSE++A AFGLI+ +PIR++KNLR+C DCH++IK ISK+ R + VR
Sbjct: 568 EEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 627
Query: 580 DNNRFHRFEDGKCTCGDYW 598
D RFH F+DG C+C DYW
Sbjct: 628 DRKRFHHFQDGSCSCMDYW 646
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 19/197 (9%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
NY T+ + L A++ SL G LH + +G+ +L LI+ YSK + ++ VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
P + TWS++I+ FA + A+D F +M + G+ P D +C+ +
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Query: 141 VG-------LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSW 192
G +S+ L + ++ +VD+ + G + A MP + + V W
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHY------GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 446
Query: 193 SGMI-----YGYVQLGE 204
++ G V++G+
Sbjct: 447 KALLGACRMQGNVEMGK 463
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/576 (34%), Positives = 321/576 (55%), Gaps = 3/576 (0%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
TI N + H L +LH + +K L+++ + Y+K + + +VF+
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI 456
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
++ +W++LI AQ++ P L+LD QM GLLPD + + +C+ L S+ +G
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H ++ D+FV S++ +Y CGE+ + +FD M +++VSW+ +I GY+Q G
Sbjct: 517 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG 576
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
+ AL +F+Q +V + + ++ V C L LG++ H + K + F+A
Sbjct: 577 FPDRALGVFRQ-MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 635
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
SLI +Y+K G++ + + F L+ ++ WNAM++ H +LFE+M+ G
Sbjct: 636 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH- 694
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
P+ +TFL VL AC+H+GL+ +G Y + MK +G++P +HYA ++D+LGRAG+L A+
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 754
Query: 384 QVI-EEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXX 442
+V+ EEM E +W +LL+ CRIH + E+ VA ++FE VLLSN
Sbjct: 755 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 814
Query: 443 XXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
+ + + ++K+ G SW+E +V +F G+R EI + L ++
Sbjct: 815 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 874
Query: 503 AKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCH 562
+K GY DT V ++ EEK + +R HSE+LA+ +GLI + IRV KNLR+C DCH
Sbjct: 875 SKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCH 934
Query: 563 TAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
A K ISK+ R ++VRDN RFH F++G C+CGDYW
Sbjct: 935 NAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 190/387 (49%), Gaps = 12/387 (3%)
Query: 36 RSLRRGLQLHAHII-KTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
+ + G ++H + T L +L +I Y+ P+ S VF++ ++ W+++
Sbjct: 98 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 95 ISSFAQNDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
ISS+++N+L L+ F +M+ LLPD P K+CA +S + +GL++H L +KT
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 217
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
DVFV ++LV Y G + A +FD MP RN+VSW+ MI + G EE+ L
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 277
Query: 214 QVLVEEDVGV---NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
+++ E G + TL +VL VC + LGK +HGW K D + ++L+ +Y
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 337
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG-GVKPNFIT 329
SKCG + A F+ +N+ WN M+ + T+ TF++ QM + G VK + +T
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 330 FLCVLYACSHAGLVE--KGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE 387
L + C H + K H + L ++ E + + V + G L A +V
Sbjct: 398 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF---VASYAKCGSLSYAQRVFH 454
Query: 388 EMPMEPTESVWGALLTGCRIHGDTELA 414
+ + S W AL+ G D L+
Sbjct: 455 GIRSKTVNS-WNALIGGHAQSNDPRLS 480
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 184/369 (49%), Gaps = 8/369 (2%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
GL +H ++KTGL + + L++FY +LQ+F+ P R+ +W+S+I F+
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 101 NDLPHLALDFFRQMLRI----GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
N + +M+ +PD L T CA I +G +H A+K
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
++ + ++L+DMY+KCG I A+ +F ++NVVSW+ M+ G+ G+ + +Q+L
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 217 VE-EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
EDV ++ T+ + + VC + L K++H + K F + VA++ ++ Y+KCG+
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
+ A + F ++ + + WNA++ AQ + + QMK + G+ P+ T +L
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK-ISGLLPDSFTVCSLLS 504
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
ACS + G+ + +++ +E Y +++ L G+L VQ + + + +
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELC-TVQALFDAMEDKSL 562
Query: 396 SVWGALLTG 404
W ++TG
Sbjct: 563 VSWNTVITG 571
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 196/415 (47%), Gaps = 10/415 (2%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ L R + G +H +K L+ +L++ L++ YSK ++ +F +
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIG--LLPDDHILPTAAKSCAALSSIHV 141
+++ +W++++ F+ H D RQML G + D+ + A C S +
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
LH +LK + + VA++ V YAKCG + YA+ VF + + V SW+ +I G+ Q
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
+ +L Q+ + + + FT+ S+L C L LGK++HG+ + + F
Sbjct: 474 SNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 532
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
V S++SLY CG + F+ ++ ++L WN ++ Q+ +R +F QM +
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM-VLY 591
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G++ I+ + V ACS + G+ H + L + +E + +++D+ + G +
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGREAHAYAL---KHLLEDDAFIACSLIDMYAKNGSI 648
Query: 380 QDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
+ +V + + T S W A++ G IHG + A + + + GH L L
Sbjct: 649 TQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 316/559 (56%), Gaps = 5/559 (0%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
Q+HAH+I TG L LI + + +F S P ++S+I S ++
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
LP + ++R+ML + P ++ + KSCA LS++ +G +H A+ + + LD +V +
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQA 146
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
+LV Y+KCG++ AR VFD MP +++V+W+ ++ G+ Q G +EA+++F Q + E
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ-MRESGFE 205
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
+ T S+L C + + LG +H + D + + ++LI+LYS+CG V A +
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 283 FEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGL 342
F++++ N+ W AM+ A H + + ELF +M+ G PN +TF+ VL AC+HAGL
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325
Query: 343 VEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPM---EPTESVWG 399
VE+G+ ++ M K Y + PG +H+ MVD+LGRAG L +A + I ++ ++W
Sbjct: 326 VEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWT 385
Query: 400 ALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQG 459
A+L C++H + +L +A R+ + G +V+LSN +
Sbjct: 386 AMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNN 445
Query: 460 IKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVG 519
++K+ G S +E N+ + F+ GD SH +T EIY LE L + GY + V+ +V
Sbjct: 446 LRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVE 505
Query: 520 GEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVR 579
EEK +RYHSE+LA+AFGL+ + I ++KNLR+C DCH+A K+IS ++ R + VR
Sbjct: 506 EEEKEFALRYHSEKLAVAFGLLK-TVDVAITIVKNLRICEDCHSAFKYISIVSNRQITVR 564
Query: 580 DNNRFHRFEDGKCTCGDYW 598
D RFH F++G C+C DYW
Sbjct: 565 DKLRFHHFQNGSCSCLDYW 583
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 154/313 (49%), Gaps = 17/313 (5%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
+LR G +H H + +G + L+ FYSK + QVF+ P +S W+SL+S
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
F QN L A+ F QM G PD + +CA ++ +G +H + L
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
+V + ++L+++Y++CG++G AR VFD+M NV +W+ MI Y G ++A+ LF +
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK-- 299
Query: 217 VEEDVG--VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS-----SLISL 269
+E+D G N+ T +VL C + L+E G+ + +K S + ++ +
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSV----YKRMTKSYRLIPGVEHHVCMVDM 355
Query: 270 YSKCGAVEGAYQAFEEL----QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP 325
+ G ++ AY+ +L + +W AML AC H + + E+ +++ ++ P
Sbjct: 356 LGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNP 415
Query: 326 NFITFLCVLYACS 338
L +YA S
Sbjct: 416 GHHVMLSNIYALS 428
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/561 (35%), Positives = 310/561 (55%), Gaps = 11/561 (1%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
LH ++K+ + L+ Y + + ++F+ P R +W+SLIS ++
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 104 PHLALDFFRQML--RIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
+ +M+ +G P++ + +C S G +H L +K +V V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF---KQVLVE 218
++ ++ Y K G++ + +F+++ +N+VSW+ MI ++Q G E+ L F ++V E
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
D T +VLR C ++ L + IHG F + + ++L+ LYSK G +E
Sbjct: 233 PDQA----TFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLED 288
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
+ F E+ + W AML A A H + FE M G + P+ +TF +L ACS
Sbjct: 289 SSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG-ISPDHVTFTHLLNACS 347
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
H+GLVE+G+HYFE M K Y I+P HY+ MVDLLGR+G LQDA +I+EMPMEP+ VW
Sbjct: 348 HSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVW 407
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
GALL CR++ DT+L + A+R+FE V+LSN +++ +
Sbjct: 408 GALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQK 467
Query: 459 GIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM-AKAGYVADTSFVLKE 517
G+ + +G S++E GN++H F GD SH ++ +I KL+E+ +M ++ GY + T FVL +
Sbjct: 468 GLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHD 527
Query: 518 VGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLI 577
VG + K + I HSE++A+AFGL+ PI + KNLR+CGDCH K IS I R +I
Sbjct: 528 VGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRII 587
Query: 578 VRDNNRFHRFEDGKCTCGDYW 598
+RD+ RFH F DG C+C DYW
Sbjct: 588 IRDSKRFHHFLDGSCSCSDYW 608
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 11/287 (3%)
Query: 126 LPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
L A KSC SI + LH +K+ + F+ LV Y + G A +FDEMP
Sbjct: 37 LIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLEL 243
R++VSW+ +I GY G + + ++++ E VG N+ T S++ C E
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE-VGFRPNEVTFLSMISACVYGGSKEE 152
Query: 244 GKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQ 303
G+ IHG K V ++ I+ Y K G + + + FE+L ++NL WN M++ Q
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 304 HAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGS 363
+ + F + VG +P+ TFL VL +C G+V Q L+ +G G+
Sbjct: 213 NGLAEKGLAYFNMSRRVGH-EPDQATFLAVLRSCEDMGVVRLAQGIHGLIM--FGGFSGN 269
Query: 364 QHYAT-MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
+ T ++DL + G+L+D+ V E+ P W A+L HG
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHG 315
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 141/303 (46%), Gaps = 12/303 (3%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTG-LETIPLLSHHLINFYSKTQLPNSSLQV 79
N T + + A + S G +H ++K G LE + +++ IN+Y KT SS ++
Sbjct: 133 NEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNA-FINWYGKTGDLTSSCKL 191
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F ++ +W+++I QN L L +F R+G PD +SC + +
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
+ +H L + + + + ++L+D+Y+K G + + VF E+ + ++W+ M+ Y
Sbjct: 252 RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQ-IHGWCFKTSFDS 258
G +A++ F +++V + + T + +L C S L+E GK + D
Sbjct: 312 ATHGFGRDAIKHF-ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDP 370
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTN-------RT 310
S ++ L + G ++ AY +E+ + + G+W A+L AC + T R
Sbjct: 371 RLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERL 430
Query: 311 FEL 313
FEL
Sbjct: 431 FEL 433
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 225 DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFE 284
D +SS++ + +EL + +H K+ F+ L+ Y + G A + F+
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90
Query: 285 ELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK-SVGGVKPNFITFLCVLYACSHAGLV 343
E+ R+L WN+++ + + + FE+ +M S G +PN +TFL ++ AC + G
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
E+G+ L+ K +G+ + ++ G+ G L + ++ E++ ++ S W ++
Sbjct: 151 EEGRCIHGLVMK-FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS-WNTMIV 208
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/572 (32%), Positives = 317/572 (55%), Gaps = 5/572 (0%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
NY T + L A +G LH ++ +GL ++ + L++ Y K + S +V
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS-- 138
P R W++LI +A+++ P AL F Q +R+ + ++I + S L
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSACLLPGDL 462
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+ G LHA + + D V +SL+ MYAKCG++ ++++F+ + +RN+++W+ M+
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
G EE L+L + + V ++ F+ S L +LE G+Q+HG K F+
Sbjct: 523 NAHHGHGEEVLKLVSK-MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
F+ ++ +YSKCG + + R+L WN ++ A +H + F +M
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
+G +KP +TF+ +L ACSH GLV+KG Y++++ +D+G+EP +H ++DLLGR+G+
Sbjct: 642 EMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 700
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNX 438
L +A I +MPM+P + VW +LL C+IHG+ + A+ + + + VL SN
Sbjct: 701 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 760
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
K + + IKK+ SWV+ ++V +F GDR+H +T+EIY KLE++
Sbjct: 761 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 820
Query: 499 GDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVC 558
+ ++GYVADTS L++ E+K + HSERLA+A+ L++ P+ +R+ KNLR+C
Sbjct: 821 KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRIC 880
Query: 559 GDCHTAIKFISKITGRVLIVRDNNRFHRFEDG 590
DCH+ KF+S++ GR +++RD RFH FE G
Sbjct: 881 SDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 191/408 (46%), Gaps = 9/408 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ L L H + G +H ++K G +++ + + L+ Y+ + VF
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
P + +W+SL++SF + AL M+ G + +A +C
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G LH L + + + + ++LV MY K GE+ +R V +MP R+VV+W+ +I GY
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVC-GASTLLELGKQIHGWCFKTSFDSS 259
+ + ++AL F+ + V E V N T+ SVL C LLE GK +H + F+S
Sbjct: 423 EDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
V +SLI++Y+KCG + + F L RN+ WNAML A A H H +L +M+S
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
GV + +F L A + ++E+GQ L K G E S + D+ + G++
Sbjct: 542 F-GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEI 599
Query: 380 QDAVQVIEEMPMEPTESV--WGALLTGCRIHGDTELASYVADRVFEQG 425
+ V++ +P S+ W L++ HG E + E G
Sbjct: 600 GEVVKM---LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 644
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 184/386 (47%), Gaps = 6/386 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
R G+Q+H + K+GL + +S +++ Y L + S +VF P R+ +W+SL+
Sbjct: 58 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
++ P +D ++ M G+ +++ + SC L +G + +K+
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ V +SL+ M G + YA +FD+M R+ +SW+ + Y Q G EE+ R+F +
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
D VN T+S++L V G + G+ IHG K FDS V ++L+ +Y+ G
Sbjct: 238 FHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A F+++ ++L WN+++ + + L M S G N++TF L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS-SGKSVNYVTFTSALAAC 355
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
EKG+ L+ G+ +V + G+ G++ ++ +V+ +MP +
Sbjct: 356 FTPDFFEKGRILHGLVVVS-GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA- 413
Query: 398 WGALLTGCRIHGDTE--LASYVADRV 421
W AL+ G D + LA++ RV
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRV 439
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 165/321 (51%), Gaps = 5/321 (1%)
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI-HVG 142
P R+ +W++++S + L ++FFR+M +G+ P ++ + +C S+ G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
+ +H K+ DV+V+++++ +Y G + +R VF+EMP RNVVSW+ ++ GY
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV 262
GE EE + ++K + E VG N+ ++S V+ CG LG+QI G K+ +S V
Sbjct: 122 GEPEEVIDIYKG-MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+SLIS+ G V+ A F+++ R+ WN++ A AQ+ H +F +F M+
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
+ N T +L H + G+ L+ K G + T++ + AG+ +A
Sbjct: 241 -EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 383 VQVIEEMPMEPTESVWGALLT 403
V ++MP + S W +L+
Sbjct: 299 NLVFKQMPTKDLIS-WNSLMA 318
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 302/572 (52%), Gaps = 12/572 (2%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L +L + R+L G Q+HAH+I+ GL + + ++N Y K + +VF+ +
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+ L+ + Q AL F ++ G+ D + K+CA+L +++G +HA
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
K +V V + LVD Y KC A F E+ N VSWS +I GY Q+ + EEA
Sbjct: 311 VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
++ FK + + +N FT +S+ + C +G Q+H K S S + S+LI+
Sbjct: 371 VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT 430
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
+YSKCG ++ A + FE + ++ W A + A + + + LFE+M S G+KPN +
Sbjct: 431 MYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC-GMKPNSV 489
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
TF+ VL ACSHAGLVE+G+H + M + Y + P HY M+D+ R+G L +A++ ++
Sbjct: 490 TFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKN 549
Query: 389 MPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXX 448
MP EP W L+GC H + EL + + + + VL N
Sbjct: 550 MPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEA 609
Query: 449 XXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYV 508
K++ ++ +KKE SW++E ++H F GD+ H +T EIY KL+E G++
Sbjct: 610 AEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------GFM 663
Query: 509 ADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITF--PQERPIRVMKNLRVCGDCHTAIK 566
F + E+ + + HSERLAIAFGLI+ PI+V KNLR C DCH K
Sbjct: 664 EGDMF---QCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAK 720
Query: 567 FISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
+S +TG +++RD+ RFH F++GKC+C DYW
Sbjct: 721 HVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 196/400 (49%), Gaps = 14/400 (3%)
Query: 36 RSLRRGLQLHAHIIKTGLETIP-LLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
RSL G LH + + G+E LL + ++ Y + + + ++F+ +A + +++
Sbjct: 97 RSLSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTM 155
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
IS++A+ + A+ F ML G P + T KS ++ G +HA ++
Sbjct: 156 ISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL 215
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
+ + + +V+MY KCG + A+ VFD+M + V+ +G++ GY Q G +AL+LF
Sbjct: 216 CSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVD 275
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG 274
LV E V + F S VL+ C + L LGKQIH K +S V + L+ Y KC
Sbjct: 276 -LVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS 334
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
+ E A +AF+E++ N W+A++ Q + + F+ ++S N T+ +
Sbjct: 335 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 335 YACS-HAGLVEKGQHYFELMKKDYGIEPGSQH-YATMVDLLGRAGKLQDAVQVIEEMPME 392
ACS A GQ + + +K+ GSQ+ + ++ + + G L DA +V E M
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSL---IGSQYGESALITMYSKCGCLDDANEVFESMD-N 450
Query: 393 PTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN 432
P W A ++G +G+ A R+FE+ VS G+
Sbjct: 451 PDIVAWTAFISGHAYYGNASEAL----RLFEK-MVSCGMK 485
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 136/298 (45%), Gaps = 4/298 (1%)
Query: 107 ALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVD 166
A +F ++M + G+ + ++C L S+ G LH + V + + ++
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQ 126
Query: 167 MYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF 226
MY +C + A +FDEM N VS + MI Y + G ++A+ LF +L D +
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 227 TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
+++L+ L+ G+QIH + S+ + + ++++Y KCG + GA + F+++
Sbjct: 187 -YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 287 QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG 346
V+ +++ Q +LF + + GV+ + F VL AC+ + G
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVT-EGVEWDSFVFSVVLKACASLEELNLG 304
Query: 347 QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+ + K G+E +VD + + A + +E+ EP + W A+++G
Sbjct: 305 KQIHACVAK-LGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIISG 360
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/520 (37%), Positives = 301/520 (57%), Gaps = 11/520 (2%)
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F+ P + A +W+++I+ +A+ A + F M+ + + ++ + C L
Sbjct: 147 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMI-SGYIECGDLEKA 205
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMIYG 198
+ K A V ++++ Y K ++ A +F +M ++N+V+W+ MI G
Sbjct: 206 -------SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 258
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
YV+ E+ L+LF+ +L EE + N LSS L C + L+LG+QIH K++ +
Sbjct: 259 YVENSRPEDGLKLFRAML-EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN 317
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
+SLIS+Y KCG + A++ FE ++ +++ WNAM+ AQH + ++ LF +M
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
++P++ITF+ VL AC+HAGLV G YFE M +DY +EP HY MVDLLGRAGK
Sbjct: 378 D-NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGK 436
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNX 438
L++A+++I MP P +V+G LL CR+H + ELA + A+++ + ++ V L+N
Sbjct: 437 LEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANI 496
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
K +++ + K G SW+E N+VH F + DR H + I+ KL+EL
Sbjct: 497 YASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKEL 556
Query: 499 GDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVC 558
+M AGY + F L V E+K + + +HSE+LA+AFG I PQ I+V KNLR+C
Sbjct: 557 EKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRIC 616
Query: 559 GDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
GDCH AIKFIS+I R +IVRD RFH F+DG C+CGDYW
Sbjct: 617 GDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 20/293 (6%)
Query: 130 AKSCAALSSIHVGLSLHALALKTAYHL-------DVFVASSLVDMYAKCGEIGYARNVFD 182
AK+ +S+ +G+S + A+ L D F + ++ Y + A++ FD
Sbjct: 89 AKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFD 148
Query: 183 EMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLE 242
MP ++ SW+ MI GY + GE E+A LF ++ + +V N + S CG +
Sbjct: 149 RMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWN--AMISGYIECG-----D 201
Query: 243 LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV-RNLGMWNAMLIAC 301
L K H FK + +++I+ Y K VE A F+++ V +NL WNAM+
Sbjct: 202 LEKASH--FFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY 259
Query: 302 AQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEP 361
+++ +LF M G++PN L CS ++ G+ +++ K
Sbjct: 260 VENSRPEDGLKLFRAMLE-EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCND 318
Query: 362 GSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
+ +++ + + G+L DA ++ E M + + W A+++G HG+ + A
Sbjct: 319 VTA-LTSLISMYCKCGELGDAWKLFEVMKKKDVVA-WNAMISGYAQHGNADKA 369
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 253 KTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH-AHTNRTF 311
K S F + +I+ + G ++GA + F ++ +N WN++LI ++ +
Sbjct: 54 KPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAH 113
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMK-KDYGIEPGSQHYATMV 370
+LF+++ +P+ ++ +L EK Q +F+ M KD + + TM+
Sbjct: 114 QLFDEIP-----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKD------AASWNTMI 162
Query: 371 DLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASY 416
R G+++ A ++ M ME E W A+++G GD E AS+
Sbjct: 163 TGYARRGEMEKARELFYSM-MEKNEVSWNAMISGYIECGDLEKASH 207
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/592 (33%), Positives = 315/592 (53%), Gaps = 32/592 (5%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G +++A I +G+E L+ L++ Y K + + ++F+ + +++ S+
Sbjct: 252 LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ + L AL F M+ G+ PD + +A SC+ L +I G S H L+ +
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 158 VFVASSLVDMYAKC-------------------------------GEIGYARNVFDEMPH 186
+ ++L+DMY KC GE+ A F+ MP
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 187 RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQ 246
+N+VSW+ +I G VQ EEA+ +F + +E V + T+ S+ CG L+L K
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 247 IHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAH 306
I+ + K + ++L+ ++S+CG E A F L R++ W A + A A +
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 307 TNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHY 366
R ELF+ M G+KP+ + F+ L ACSH GLV++G+ F M K +G+ P HY
Sbjct: 552 AERAIELFDDMIE-QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHY 610
Query: 367 ATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGH 426
MVDLLGRAG L++AVQ+IE+MPMEP + +W +LL CR+ G+ E+A+Y A+++
Sbjct: 611 GCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAP 670
Query: 427 VSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHA 486
+G VLLSN ++++G++K G S ++ + H F +GD SH
Sbjct: 671 ERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHP 730
Query: 487 KTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQE 546
+ I L+E+ + G+V D S VL +V +EK + HSE+LA+A+GLI+ +
Sbjct: 731 EMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKG 790
Query: 547 RPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
IR++KNLRVC DCH+ KF SK+ R +I+RDNNRFH GKC+CGD+W
Sbjct: 791 TTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 197/402 (49%), Gaps = 7/402 (1%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLE----TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR 86
+L + +++ H + K GL+ TI L ++ L + NS +
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+ ++SLI +A + L + A+ F +M+ G+ PD + P +CA + G+ +H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
L +K Y D+FV +SLV YA+CGE+ AR VFDEM RNVVSW+ MI GY + +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
+A+ LF +++ +E+V N T+ V+ C LE G++++ + + + + + S+L
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+ +Y KC A++ A + F+E NL + NAM + T +F M GV+P+
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPD 336
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
I+ L + +CS + G+ + ++ G E ++D+ + + A ++
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 387 EEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVS 428
+ M T W +++ G +G+ + A + + E+ VS
Sbjct: 396 DRMS-NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 202/435 (46%), Gaps = 35/435 (8%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A SR+ G+Q+H I+K G + + L++FY++ +S+ +VF+ R+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
+W+S+I +A+ D A+D F +M+R + P+ + +CA L + G ++A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
+ ++ + S+LVDMY KC I A+ +FDE N+ + M YV+ G E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLI 267
AL +F ++++ V + ++ S + C + GK HG+ + F+S + ++LI
Sbjct: 321 ALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 268 SLYSKC-------------------------------GAVEGAYQAFEELQVRNLGMWNA 296
+Y KC G V+ A++ FE + +N+ WN
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 297 MLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKD 356
++ Q + E+F M+S GV + +T + + AC H G ++ + + ++K+
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 357 YGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASY 416
GI+ + T+VD+ R G + A+ + + S W A + + G+ E A
Sbjct: 500 -GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV-SAWTAAIGAMAMAGNAERAIE 557
Query: 417 VADRVFEQGHVSSGL 431
+ D + EQG G+
Sbjct: 558 LFDDMIEQGLKPDGV 572
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
+ C HL AL ++ ++ +I K G++ L L++ +S+ P S++ +FNS
Sbjct: 478 SACGHLGALDLAK------WIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG- 142
+R + W++ I + A A++ F M+ GL PD A +C+ + G
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 143 ------LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGM 195
L LH ++ + ++ +VD+ + G + A + ++MP N V W+ +
Sbjct: 592 EIFYSMLKLHGVSPEDVHY------GCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 196 IYGYVQLGEDEEALRLFK--QVLVEEDVG 222
+ G E A + QVL E G
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTG 674
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 296/547 (54%), Gaps = 39/547 (7%)
Query: 91 WSSLISSFAQN---DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
W+ +I + N H + + +M + PD H P S + +G HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGE-------------------------------IGY 176
L D FV +SL++MY+ CG+ I
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 177 ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV----EEDVGVNDFTLSSVL 232
AR +FDEMP RNV+SWS +I GYV G+ +EAL LF+++ + E V N+FT+S+VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 233 RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL-QVRNL 291
CG LE GK +H + K + + ++LI +Y+KCG++E A + F L +++
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 292 GMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFE 351
++AM+ A + T+ F+LF +M + + PN +TF+ +L AC H GL+ +G+ YF+
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 352 LMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDT 411
+M +++GI P QHY MVDL GR+G +++A I MPMEP +WG+LL+G R+ GD
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 412 ELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEE 471
+ R+ E ++SG VLLSN + +GI K G S+VE
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 472 GNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHS 531
VH F GD S ++ IY L+E+ + +AGYV DT VL ++ ++K + YHS
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHS 506
Query: 532 ERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGK 591
E+LAIAF L+ P+R++KNLR+CGDCH +K ISK+ R ++VRD NRFH F DG
Sbjct: 507 EKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGS 566
Query: 592 CTCGDYW 598
C+C D+W
Sbjct: 567 CSCRDFW 573
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 16/248 (6%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQML-----RI 117
++N Y+K L + + ++F+ P R+ +WS LI+ + ALD FR+M
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA 193
Query: 118 GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYA 177
+ P++ + T +C L ++ G +HA K +D+ + ++L+DMYAKCG + A
Sbjct: 194 FVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 178 RNVFDEM-PHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCG 236
+ VF+ + ++V ++S MI G +E +LF ++ +++ N T +L C
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 237 ASTLLELGKQIHGWCFKTSFDSSCFVAS-----SLISLYSKCGAVEGAYQAFEELQVR-N 290
L+ GK FK + S ++ LY + G ++ A + + +
Sbjct: 314 HRGLINEGKSY----FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD 369
Query: 291 LGMWNAML 298
+ +W ++L
Sbjct: 370 VLIWGSLL 377
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 358 bits (920), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 312/566 (55%), Gaps = 2/566 (0%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS 92
++S + G Q H +K GL + + + L+ YS +++V + P+ + +S
Sbjct: 147 SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
S +S + + LD R+ + ++ ++ + + L +++ L +H+ ++
Sbjct: 207 SALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRF 266
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
++ +V +L++MY KCG++ YA+ VFD+ +N+ + ++ Y Q EEAL LF
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLF 326
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
++ +E V N++T + +L +LL+ G +HG K+ + + V ++L+++Y+K
Sbjct: 327 SKMDTKE-VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAK 385
Query: 273 CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLC 332
G++E A +AF + R++ WN M+ C+ H E F++M G + PN ITF+
Sbjct: 386 SGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIG 444
Query: 333 VLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
VL ACSH G VE+G HYF + K + ++P QHY +V LL +AG +DA + P+E
Sbjct: 445 VLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 393 PTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXX 452
W LL C + + L VA+ E+ SG+ VLLSN
Sbjct: 505 WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVR 564
Query: 453 KMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTS 512
++ ++G+KKE G+SW+ N+ H F A D H + IY K++E+ ++ GY D +
Sbjct: 565 SLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVA 624
Query: 513 FVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKIT 572
+V E++ + YHSE+LA+A+GLI P++ P+ V KN+R+C DCH+AIK ISKI+
Sbjct: 625 GAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKIS 684
Query: 573 GRVLIVRDNNRFHRFEDGKCTCGDYW 598
R +++RD+NRFH F DG+C+C DYW
Sbjct: 685 KRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 187/413 (45%), Gaps = 9/413 (2%)
Query: 27 NHLLAL-THSRSLRRGLQLHAHIIKTGLETIPLLSHH---LINFYSKTQLPNSSLQVFNS 82
N LL + +S LR G +HAH+I T + ++ LIN Y K + + ++F+
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIG-LLPDDHILPTAAKSCAALSSIHV 141
P R+ +W +++ + + L F+ M G P++ + KSC+ I
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
G H LK FV ++LV MY+ C G A V D++P+ ++ +S + GY++
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
G +E L + ++ ED N+ T S LR+ L L Q+H + F++
Sbjct: 215 CGAFKEGLDVLRKT-ANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
+LI++Y KCG V A + F++ +N+ + ++ A Q LF +M +
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT-K 332
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
V PN TF +L + + L+++G L+ K G +V++ ++G ++D
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS-GYRNHVMVGNALVNMYAKSGSIED 391
Query: 382 AVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
A + M + W +++GC HG A DR+ G + + + +
Sbjct: 392 ARKAFSGMTFRDIVT-WNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 5/284 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + L ++ R L LQ+H+ +++ G LIN Y K + +VF
Sbjct: 236 NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVF 295
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ + ++ ++++ ++ Q+ AL+ F +M + P+++ S A LS +
Sbjct: 296 DDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLK 355
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G LH L LK+ Y V V ++LV+MYAK G I AR F M R++V+W+ MI G
Sbjct: 356 QGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCS 415
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
G EAL F +++ ++ N T VL+ C +E G K FD
Sbjct: 416 HHGLGREALEAFDRMIFTGEIP-NRITFIGVLQACSHIGFVEQGLHYFNQLMK-KFDVQP 473
Query: 261 FVA--SSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIAC 301
+ + ++ L SK G + A + ++ W +L AC
Sbjct: 474 DIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNAC 517
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 228 LSSVLRVCGASTLLELGKQIHGWCFKTSFDS---SCFVASSLISLYSKCGAVEGAYQAFE 284
L+ +L+VC S+ L +G+ IH T+ S + +SLI+LY KC A + F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 285 ELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVE 344
+ RN+ W AM+ +LF+ M G +PN V +CS++G +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 345 KGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+G+ + K YG+ T+V + +A++V++++P SV+ + L+G
Sbjct: 154 EGKQFHGCFLK-YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDL-SVFSSALSG 211
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 358 bits (919), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 313/575 (54%), Gaps = 7/575 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKT-GLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS 87
L A ++SL G+++ + I+ L P L LI +S + + + ++F+ S
Sbjct: 138 LHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSS 197
Query: 88 ATT---WSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS 144
T W+++ +++N P AL + ML + P + + A K+C L + VG
Sbjct: 198 LLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRG 257
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
+HA +K +D V + L+ +Y + G AR VFD M RNVV+W+ +I +
Sbjct: 258 IHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVR 317
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
E LF++ + EE +G + TL+++L C L GK+IH K+ + +
Sbjct: 318 VHEMFNLFRK-MQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 265 SLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
SL+ +Y KCG VE + + F+ + ++L WN ML A + + LFE M GV
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE-SGVA 435
Query: 325 PNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQ 384
P+ ITF+ +L CS GL E G FE MK ++ + P +HYA +VD+LGRAGK+++AV+
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 385 VIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXX 444
VIE MP +P+ S+WG+LL CR+HG+ + A +F + G V++SN
Sbjct: 496 VIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKM 555
Query: 445 XXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKL-EELGDEMA 503
+M++ +G+KKE G SWV+ +++ F AG + + Y K+ EL + +
Sbjct: 556 WDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIE 615
Query: 504 KAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHT 563
K+GY +TS VL +V E K + HSERLA + LI + PIR+ KNLRVC DCH+
Sbjct: 616 KSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHS 675
Query: 564 AIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
+K +S++T RV+++RD RFH F DG C+C DYW
Sbjct: 676 WMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLET-IPLLSHHLINFYSKTQLPNSSLQV 79
++ T+ L A + +L G ++HA I+K+ + +PLL + L++ Y K S +V
Sbjct: 336 SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL-NSLMDMYGKCGEVEYSRRV 394
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F+ + +W+ +++ +A N ++ F M+ G+ PD C+
Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454
Query: 140 HVGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHRNVVS-WSGM- 195
GLSL +KT + + + + LVD+ + G+I A V + MP + S W +
Sbjct: 455 EYGLSLFE-RMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
Query: 196 ----IYGYVQLGE 204
++G V +GE
Sbjct: 514 NSCRLHGNVSVGE 526
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 308/592 (52%), Gaps = 39/592 (6%)
Query: 43 QLHAHIIKTGLE----TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
Q+HA ++KTGL I I+ S LP + + VF+ W+ +I F
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQI-VFDGFDRPDTFLWNLMIRGF 90
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
+ +D P +L +++ML + + P+ K+C+ LS+ +HA K Y DV
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 159 FVASSLVDMYA-------------------------------KCGEIGYARNVFDEMPHR 187
+ +SL++ YA K G++ A +F +M +
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 188 NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQI 247
N +SW+ MI GYVQ ++EAL+LF + + DV ++ +L++ L C LE GK I
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHE-MQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 248 HGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHT 307
H + KT + LI +Y+KCG +E A + F+ ++ +++ W A++ A H H
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
F +M+ +G +KPN ITF VL ACS+ GLVE+G+ F M++DY ++P +HY
Sbjct: 330 REAISKFMEMQKMG-IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 368 TMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
+VDLLGRAG L +A + I+EMP++P +WGALL CRIH + EL + + +
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPY 448
Query: 428 SSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAK 487
G V +N +++++QG+ K G S + H F AGDRSH +
Sbjct: 449 HGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPE 508
Query: 488 TVEIYNKLEELGDEMAKAGYVAD-TSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQE 546
+I +K + ++ + GYV + +L V +E+ + HSE+LAI +GLI
Sbjct: 509 IEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPG 568
Query: 547 RPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
IR+MKNLRVC DCH K ISKI R +++RD RFH F DGKC+CGDYW
Sbjct: 569 TIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
++ N L A +L +G +H+++ KT + +L LI+ Y+K +L+VF +
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
+S W++LIS +A + A+ F +M ++G+ P+ +C+ + G
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG- 367
Query: 144 SLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGYV 200
L +++ Y+L + +VD+ + G + A+ EMP + N V W ++
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL---- 423
Query: 201 QLGEDEEALRLFKQVLVEEDVG 222
+A R+ K + + E++G
Sbjct: 424 ------KACRIHKNIELGEEIG 439
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 314/591 (53%), Gaps = 32/591 (5%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G +++A I +G+E L+ L++ Y K + + ++F+ + +++ S+
Sbjct: 252 LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ + L AL F M+ G+ PD + +A SC+ L +I G S H L+ +
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 158 VFVASSLVDMYAKC-------------------------------GEIGYARNVFDEMPH 186
+ ++L+DMY KC GE+ A F+ MP
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 187 RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQ 246
+N+VSW+ +I G VQ EEA+ +F + +E V + T+ S+ CG L+L K
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 247 IHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAH 306
I+ + K + ++L+ ++S+CG E A F L R++ W A + A A +
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 307 TNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHY 366
R ELF+ M G+KP+ + F+ L ACSH GLV++G+ F M K +G+ P HY
Sbjct: 552 AERAIELFDDMIE-QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHY 610
Query: 367 ATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGH 426
MVDLLGRAG L++AVQ+IE+MPMEP + +W +LL CR+ G+ E+A+Y A+++
Sbjct: 611 GCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAP 670
Query: 427 VSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHA 486
+G VLLSN ++++G++K G S ++ + H F +GD SH
Sbjct: 671 ERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHP 730
Query: 487 KTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQE 546
+ I L+E+ + G+V D S VL +V +EK + HSE+LA+A+GLI+ +
Sbjct: 731 EMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKG 790
Query: 547 RPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDY 597
IR++KNLRVC DCH+ KF SK+ R +I+RDNNRFH GKC+CGD+
Sbjct: 791 TTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 197/402 (49%), Gaps = 7/402 (1%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLE----TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR 86
+L + +++ H + K GL+ TI L ++ L + NS +
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+ ++SLI +A + L + A+ F +M+ G+ PD + P +CA + G+ +H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
L +K Y D+FV +SLV YA+CGE+ AR VFDEM RNVVSW+ MI GY + +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
+A+ LF +++ +E+V N T+ V+ C LE G++++ + + + + + S+L
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+ +Y KC A++ A + F+E NL + NAM + T +F M GV+P+
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPD 336
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
I+ L + +CS + G+ + ++ G E ++D+ + + A ++
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 387 EEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVS 428
+ M T W +++ G +G+ + A + + E+ VS
Sbjct: 396 DRMS-NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 202/435 (46%), Gaps = 35/435 (8%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A SR+ G+Q+H I+K G + + L++FY++ +S+ +VF+ R+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
+W+S+I +A+ D A+D F +M+R + P+ + +CA L + G ++A
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
+ ++ + S+LVDMY KC I A+ +FDE N+ + M YV+ G E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLI 267
AL +F ++++ V + ++ S + C + GK HG+ + F+S + ++LI
Sbjct: 321 ALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 268 SLYSKC-------------------------------GAVEGAYQAFEELQVRNLGMWNA 296
+Y KC G V+ A++ FE + +N+ WN
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 297 MLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKD 356
++ Q + E+F M+S GV + +T + + AC H G ++ + + ++K+
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 357 YGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASY 416
GI+ + T+VD+ R G + A+ + + S W A + + G+ E A
Sbjct: 500 -GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV-SAWTAAIGAMAMAGNAERAIE 557
Query: 417 VADRVFEQGHVSSGL 431
+ D + EQG G+
Sbjct: 558 LFDDMIEQGLKPDGV 572
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
+ C HL AL ++ ++ +I K G++ L L++ +S+ P S++ +FNS
Sbjct: 478 SACGHLGALDLAK------WIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG- 142
+R + W++ I + A A++ F M+ GL PD A +C+ + G
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 143 ------LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGM 195
L LH ++ + ++ +VD+ + G + A + ++MP N V W+ +
Sbjct: 592 EIFYSMLKLHGVSPEDVHY------GCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 196 IYGYVQLGEDEEALRLFK--QVLVEEDVG 222
+ G E A + QVL E G
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTG 674
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/576 (35%), Positives = 314/576 (54%), Gaps = 42/576 (7%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A + S ++ G ++H K GL + + + L++ Y K + + V + R
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+W+SL+ +AQN AL+ R+M + + D A + A+L L A+
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEVCREMESVKISHD-------AGTMASL--------LPAV 251
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
+ T + + Y +++F +M +++VSW+ MI Y++ EA
Sbjct: 252 SNTTTEN------------------VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 209 LRLFKQVLVEEDVGVND-FTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLI 267
+ L+ + +E D D +++SVL CG ++ L LGK+IHG+ + + + ++LI
Sbjct: 294 VELYSR--MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 268 SLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF 327
+Y+KCG +E A FE ++ R++ W AM+ A LF +++ G V P+
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV-PDS 410
Query: 328 ITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE 387
I F+ L ACSHAGL+E+G+ F+LM Y I P +H A MVDLLGRAGK+++A + I+
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Query: 388 EMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXX 447
+M MEP E VWGALL CR+H DT++ AD++F+ SG VLLSN
Sbjct: 471 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Query: 448 XXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGY 507
+++ +G+KK G S VE +HTF GDRSH ++ EIY +L+ L +M + GY
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGY 590
Query: 508 VADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQER-----PIRVMKNLRVCGDCH 562
V D+ L +V E+K + HSE+LAI F L+ +E IR+ KNLR+CGDCH
Sbjct: 591 VPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCH 650
Query: 563 TAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
A K IS+IT R +I+RD NRFH F G C+CGDYW
Sbjct: 651 VAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/568 (34%), Positives = 317/568 (55%), Gaps = 15/568 (2%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
LH +K G + +HL+ Y K + N++ ++F+ + +W+S+IS +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 104 PHLALDFFRQMLR-IGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
P AL F++M + P+++ + K+C+AL+ +G ++HA + ++ V+S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 163 SLVDMYAKCGEIGYARNVFDEMPH--RNVVSWSGMIYGYVQLGEDEEALRLFK--QVLVE 218
SLVDMY KC ++ AR VFD M RNVVSW+ MI Y Q EA+ LF+ +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
D N F L+SV+ C + L+ GK HG + ++S+ VA+SL+ +Y+KCG++
Sbjct: 231 SDRA-NQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A + F ++ ++ + +M++A A+H +LF++M + G + PN++T L VL+ACS
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA-GRINPNYVTLLGVLHACS 348
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE--EMPMEPTES 396
H+GLV +G Y LM + YG+ P S+HY +VD+LGR G++ +A ++ + E+ E
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLR 456
+WGALL+ R+HG E+ S + R+ + + + LSN ++
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 457 DQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGY------VAD 510
G KE SW+E + V+ F AGD S ++ EI L++L M + G+ +
Sbjct: 469 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITT 528
Query: 511 TSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISK 570
+S V +V E K++ + H ERLA+A+GL+ P IR+M NLR+C DCH A K IS+
Sbjct: 529 SSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISE 588
Query: 571 ITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
I R ++VRD NRFH F++G CTC DYW
Sbjct: 589 IVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 138/277 (49%), Gaps = 15/277 (5%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS--SPHRSATTWSSLIS 96
R G +HA + +GL ++S L++ Y K ++ +VF+S R+ +W+S+I+
Sbjct: 148 RIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMIT 207
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPD---DHILPTAAKSCAALSSIHVGLSLHALALKTA 153
++AQN H A++ FR L D +L + +C++L + G H L +
Sbjct: 208 AYAQNARGHEAIELFRS-FNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGG 266
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
Y + VA+SL+DMYAKCG + A +F + +V+S++ MI + G E A++LF
Sbjct: 267 YESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFD 326
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQ---IHGWCFKTSFDSSCFVASSLISLY 270
+ +V + N TL VL C S L+ G + + + DS + + ++ +
Sbjct: 327 E-MVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHY--TCVVDML 383
Query: 271 SKCGAVEGAYQAFEELQV---RNLGMWNAMLIACAQH 304
+ G V+ AY+ + ++V + +W A+L A H
Sbjct: 384 GRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLH 420
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 314/594 (52%), Gaps = 41/594 (6%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNS--SLQVFNSSPHRSATTWSSLISSFAQ 100
Q+H H+++ GL+ + LI +K +P + +V R+ W+++I +A
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
A+ + M + + P K+C + +++G HA + V+V
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYV 186
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
++++DMY KC I AR VFDEMP R+V+SW+ +I Y ++G E A LF+ + ++
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM 246
Query: 221 VG------------------------------VNDFTLSSVLRVC---GASTLLELGKQI 247
V ++ T++ + C GAS + QI
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 248 HGWCFKTSFDSS--CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHA 305
K+ + S + S+LI +YSKCG VE A F + +N+ +++M++ A H
Sbjct: 307 AQ---KSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQH 365
LF M + +KPN +TF+ L ACSH+GLV++G+ F+ M + +G++P H
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH 423
Query: 366 YATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
Y MVDLLGR G+LQ+A+++I+ M +EP VWGALL CRIH + E+A A+ +FE
Sbjct: 424 YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELE 483
Query: 426 HVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGN-RVHTFAAGDRS 484
G +LLSN K+++++G+KK +SWV + N ++H F G+ +
Sbjct: 484 PDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLN 543
Query: 485 HAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFP 544
H + +I +KLEEL + + GY D S V +V K + H+E+LA+AF L+T
Sbjct: 544 HPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTN 603
Query: 545 QERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
++ I +MKNLR+C DCH ++ S++TG+V+I+RDN RFH F G C+CGD+W
Sbjct: 604 RDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 11/176 (6%)
Query: 245 KQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY--QAFEELQVRNLGMWNAMLIACA 302
KQIHG + D SC++ + LI +K G Y + E +Q RN +W A++ A
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYG---I 359
+ ++ M+ + P TF +L AC + G+ + + G +
Sbjct: 126 IEGKFDEAIAMYGCMRK-EEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELAS 415
G+ TM+D+ + + A +V +EMP S W L+ G+ E A+
Sbjct: 185 YVGN----TMIDMYVKCESIDCARKVFDEMPERDVIS-WTELIAAYARVGNMECAA 235
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/527 (35%), Positives = 293/527 (55%), Gaps = 23/527 (4%)
Query: 79 VFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS 138
+F+ R+ TW+++I+ + QN+ +A F ++P K+ + +S
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLF------------EVMPE--KTEVSWTS 239
Query: 139 IHVGLSLHALALKTAYHLDVF------VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSW 192
+ +G +L +V ++++ + + GEI AR VFD M R+ +W
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATW 299
Query: 193 SGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF 252
GMI Y + G + EAL LF Q + ++ V + +L S+L VC L+ G+Q+H
Sbjct: 300 RGMIKAYERKGFELEALDLFAQ-MQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 253 KTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFE 312
+ FD +VAS L+++Y KCG + A F+ +++ MWN+++ A H +
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 313 LFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDL 372
+F +M S G PN +T + +L ACS+AG +E+G FE M+ + + P +HY+ VD+
Sbjct: 419 IFHEMPS-SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 373 LGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN 432
LGRAG++ A+++IE M ++P +VWGALL C+ H +LA A ++FE ++G
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY 537
Query: 433 VLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGD-RSHAKTVEI 491
VLLS+ K +R + K G SW+E G +VH F G ++H + I
Sbjct: 538 VLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMI 597
Query: 492 YNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRV 551
LE+ + +AGY D S VL +V EEK ++ HSERLA+A+GL+ P+ PIRV
Sbjct: 598 LMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRV 657
Query: 552 MKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
MKNLRVCGDCH AIK ISK+T R +I+RD NRFH F +G+C+C DYW
Sbjct: 658 MKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 11/237 (4%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
+VF+ R TW +I ++ + ALD F QM + G+ P L + CA L+
Sbjct: 286 RVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLA 345
Query: 138 SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIY 197
S+ G +HA ++ + DV+VAS L+ MY KCGE+ A+ VFD ++++ W+ +I
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 198 GYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
GY G EEAL++F + + N TL ++L C + LE G +I F++
Sbjct: 406 GYASHGLGEEALKIFHE-MPSSGTMPNKVTLIAILTACSYAGKLEEGLEI----FESMES 460
Query: 258 SSCFVA-----SSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTN 308
C S + + + G V+ A + E + ++ + +W A+L AC H+ +
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 126/297 (42%), Gaps = 40/297 (13%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQM-------- 114
L++ Y K ++ + VF P R+ +W++++ + Q + A F +M
Sbjct: 85 LVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSW 144
Query: 115 -LRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGE 173
+ G L DD + A K + +K DV +++++ + G
Sbjct: 145 TVMFGGLIDDGRIDKARK------------LYDMMPVK-----DVVASTNMIGGLCREGR 187
Query: 174 IGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVL- 232
+ AR +FDEM RNVV+W+ MI GY Q + A +LF+ + + +V L L
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS 247
Query: 233 -RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNL 291
R+ A E+ +++I + + G + A + F+ ++ R+
Sbjct: 248 GRIEDAEEFFEVMPM-----------KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDN 296
Query: 292 GMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQH 348
W M+ A + +LF QM+ GV+P+F + + +L C+ ++ G+
Sbjct: 297 ATWRGMIKAYERKGFELEALDLFAQMQK-QGVRPSFPSLISILSVCATLASLQYGRQ 352
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 60/327 (18%)
Query: 64 INFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDD 123
I+ S+ N + + F+S ++ +W+S++S + N LP A F +M
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------- 74
Query: 124 HILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDE 183
+V + LV Y K I ARNVF+
Sbjct: 75 ------------------------------SERNVVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 184 MPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLEL 243
MP RNVVSW+ M+ GY+Q G EA LF ++ +V S + G L++
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV-------SWTVMFGG---LIDD 154
Query: 244 GKQIHGWCFKTSFDSSCFVASS-LISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACA 302
G+ VAS+ +I + G V+ A F+E++ RN+ W M+
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPG 362
Q+ + +LFE M + +++ +L + +G +E + +FE+M ++P
Sbjct: 215 QNNRVDVARKLFEVMP-----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP----MKPV 265
Query: 363 SQHYATMVDLLGRAGKLQDAVQVIEEM 389
A +V G G++ A +V + M
Sbjct: 266 IACNAMIVG-FGEVGEISKARRVFDLM 291
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 33/274 (12%)
Query: 148 LALKTAYHLDVFVASSL-VDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
L L+ Y V S + ++ G+I AR FD + + + SW+ ++ GY G +
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLR---VCGASTLLEL--GKQIHGWCFKTSFDSSCF 261
EA +LF + + E +V + +S ++ + A + EL + + W
Sbjct: 66 EARQLFDE-MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSW----------- 113
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
++++ Y + G V A F + RN W M ++ +L++ M
Sbjct: 114 --TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD 171
Query: 322 GV-KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
V N I LC G V++ + F+ M+ E + TM+ + ++
Sbjct: 172 VVASTNMIGGLC------REGRVDEARLIFDEMR-----ERNVVTWTTMITGYRQNNRVD 220
Query: 381 DAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
A ++ E MP E TE W ++L G + G E A
Sbjct: 221 VARKLFEVMP-EKTEVSWTSMLLGYTLSGRIEDA 253
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
SL+ G Q+HAH+++ + ++ L+ Y K + VF+ + W+S+IS
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSL-HALALKTAYH 155
+A + L AL F +M G +P+ L +C+ + GL + ++ K
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVT 465
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEM 184
V S VDM + G++ A + + M
Sbjct: 466 PTVEHYSCTVDMLGRAGQVDKAMELIESM 494
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 300/533 (56%), Gaps = 24/533 (4%)
Query: 74 NSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSC 133
+ + ++F+ RS TW+++++ + QN+ A F ++P+ K+
Sbjct: 189 DEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPE--------KTE 234
Query: 134 AALSSIHVGLSLHALALKTAYHL-------DVFVASSLVDMYAKCGEIGYARNVFDEMPH 186
+ +S+ +G + ++ A L V ++++ + GEI AR VFD M
Sbjct: 235 VSWTSMLMGYVQNG-RIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKE 293
Query: 187 RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQ 246
RN SW +I + + G + EAL LF ++ ++ V TL S+L VC + L GKQ
Sbjct: 294 RNDASWQTVIKIHERNGFELEALDLF-ILMQKQGVRPTFPTLISILSVCASLASLHHGKQ 352
Query: 247 IHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAH 306
+H + FD +VAS L+++Y KCG + + F+ +++ MWN+++ A H
Sbjct: 353 VHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGL 412
Query: 307 TNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHY 366
++F +M G KPN +TF+ L ACS+AG+VE+G +E M+ +G++P + HY
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 367 ATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGH 426
A MVD+LGRAG+ +A+++I+ M +EP +VWG+LL CR H ++A + A ++ E
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 427 VSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGD-RSH 485
+SG +LLSN K+++ + ++K G SW E N+VH F G SH
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSH 592
Query: 486 AKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQ 545
+ I L+EL + +AGY D S+ L +V EEK +++YHSERLA+A+ L+ +
Sbjct: 593 PEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSE 652
Query: 546 ERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
PIRVMKNLRVC DCHTAIK ISK+ R +I+RD NRFH F +G+C+C DYW
Sbjct: 653 GIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 155/362 (42%), Gaps = 67/362 (18%)
Query: 50 KTGLETIPLLSHHL-INFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLAL 108
+T TIP + ++ I S+ + + ++F+S +S ++W+S+++ + N +P A
Sbjct: 9 RTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDAR 68
Query: 109 DFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMY 168
F +M PD +I+ + LV Y
Sbjct: 69 KLFDEM------PDRNIISW---------------------------------NGLVSGY 89
Query: 169 AKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTL 228
K GEI AR VFD MP RNVVSW+ ++ GYV G+ + A LF ++ + V +
Sbjct: 90 MKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLI 149
Query: 229 SSVL--RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
+ R+ A L E+ D +S+I K G V+ A + F+E+
Sbjct: 150 GFLQDGRIDDACKLYEMIP-----------DKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 287 QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG 346
R++ W M+ Q+ + ++F+ M + +++ +L G +E
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMP-----EKTEVSWTSMLMGYVQNGRIEDA 253
Query: 347 QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCR 406
+ FE+M ++P A M+ LG+ G++ A +V + M E ++ W ++ +
Sbjct: 254 EELFEVMP----VKPVIACNA-MISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI---K 304
Query: 407 IH 408
IH
Sbjct: 305 IH 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 164/387 (42%), Gaps = 55/387 (14%)
Query: 61 HHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL 120
+ ++ Y +P + ++F+ P R+ +W+ L+S + +N +D R++ L+
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNG----EIDEARKVF--DLM 105
Query: 121 PDDHILPTAA-----------------------KSCAALSSIHVGLSLHALALKTAYHL- 156
P+ +++ A K+ + + + +G L + A L
Sbjct: 106 PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGF-LQDGRIDDACKLY 164
Query: 157 ------DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
D +S++ K G + AR +FDEM R+V++W+ M+ GY Q ++A +
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARK 224
Query: 211 LFKQVLVEEDVGVNDFTLSSVL--RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
+F + + +V + V R+ A L E+ +++IS
Sbjct: 225 IFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV-----------KPVIACNAMIS 273
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
+ G + A + F+ ++ RN W ++ ++ +LF M+ GV+P F
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK-QGVRPTFP 332
Query: 329 TFLCVLYAC-SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE 387
T + +L C S A L Q + +L++ + ++ + ++ + + G+L + + +
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVD--VYVASVLMTMYIKCGELVKSKLIFD 390
Query: 388 EMPMEPTESVWGALLTGCRIHGDTELA 414
P + +W ++++G HG E A
Sbjct: 391 RFPSKDI-IMWNSIISGYASHGLGEEA 416
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 352 bits (902), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 210/609 (34%), Positives = 321/609 (52%), Gaps = 42/609 (6%)
Query: 30 LALTHSRSLRRGLQL-HAHIIKTGLETIPLLSHHLI-------NFYSKTQLPNSSLQVFN 81
LAL S S L++ H +++T L + ++ L+ F T L + +F+
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 82 SSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHV 141
+ + ++ LI F+ P A F+ QML+ + PD+ P K+ + + + V
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEI-----------------------GY-- 176
G H+ ++ + DV+V +SLV MYA CG I GY
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 177 ------ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSS 230
AR +FDEMPHRN+ +WS MI GY + E+A+ LF + + E V N+ + S
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF-EFMKREGVVANETVMVS 254
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRN 290
V+ C LE G++ + + K+ + + ++L+ ++ +CG +E A FE L +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
W++++ A H H ++ F QM S+G + P +TF VL ACSH GLVEKG +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI-PRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 351 ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGD 410
E MKKD+GIEP +HY +VD+LGRAGKL +A I +M ++P + GALL C+I+ +
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 411 TELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
TE+A V + + + SG VLLSN M++++ +KK G S +E
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Query: 471 EGNRVHTFAAGD-RSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRY 529
+++ F GD + H + +I K EE+ ++ GY +T +V EEK +I
Sbjct: 494 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHM 553
Query: 530 HSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFED 589
HSE+LAIA+G++ IR++KNLRVC DCHT K IS++ GR LIVRD NRFH F +
Sbjct: 554 HSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRN 613
Query: 590 GKCTCGDYW 598
G C+C DYW
Sbjct: 614 GVCSCRDYW 622
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/567 (35%), Positives = 311/567 (54%), Gaps = 15/567 (2%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPH-RSATTWSSLISSFAQN 101
QLH + G ++ +++ + +YSK L ++ VF R +W+S+I ++ Q+
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQH 218
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
AL +++M+ G D L + + +L + G H +K +H + V
Sbjct: 219 KEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG 278
Query: 162 SSLVDMYAKCGE---IGYARNVFDEMPHRNVVSWSGMIYGYVQLGE-DEEALRLFKQVLV 217
S L+D Y+KCG + + VF E+ ++V W+ MI GY E EEA++ F+Q+
Sbjct: 279 SGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM-- 336
Query: 218 EEDVG--VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF-VASSLISLYSKCG 274
+ +G +D + V C + KQIHG K+ S+ V ++LISLY K G
Sbjct: 337 -QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
++ A F+ + N +N M+ AQH H L+++M G+ PN ITF+ VL
Sbjct: 396 NLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLD-SGIAPNKITFVAVL 454
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
AC+H G V++GQ YF MK+ + IEP ++HY+ M+DLLGRAGKL++A + I+ MP +P
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 395 ESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKM 454
W ALL CR H + LA A+ + +++ V+L+N K
Sbjct: 515 SVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKS 574
Query: 455 LRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFV 514
+R + I+K+ G SW+E + H F A D SH E+ LEE+ +M K GYV D +
Sbjct: 575 MRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWA 634
Query: 515 L-KEVGGEEKNQTIR--YHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKI 571
+ KE E ++ +R +HSE+LA+AFGL++ + V+KNLR+CGDCH AIKF+S +
Sbjct: 635 MVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAV 694
Query: 572 TGRVLIVRDNNRFHRFEDGKCTCGDYW 598
GR +IVRDN RFH F+DGKC+CGDYW
Sbjct: 695 AGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 197/441 (44%), Gaps = 41/441 (9%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSK----------- 69
++T + LL R L G LHA +K+ + + LS+H +N YSK
Sbjct: 7 KFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAF 66
Query: 70 --TQLPNS------------------SLQVFNSSPHRSATTWSSLISSFAQNDLPHLALD 109
T+ PN + Q+F+ P ++++LIS +A A+
Sbjct: 67 YSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV 126
Query: 110 FFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYA 169
F++M ++G D L +C + + LH ++ + V ++ V Y+
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYS 184
Query: 170 KCGEIGYARNVFDEMPH-RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTL 228
K G + A +VF M R+ VSW+ MI Y Q E +AL L+K+++ + ++ FTL
Sbjct: 185 KGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF-KGFKIDMFTL 243
Query: 229 SSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY---QAFEE 285
+SVL + L G+Q HG K F + V S LI YSKCG +G Y + F+E
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 286 LQVRNLGMWNAMLIACAQHAH-TNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVE 344
+ +L +WN M+ + + + + F QM+ +G +P+ +F+CV ACS+
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPS 362
Query: 345 KGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+ + L K + ++ L ++G LQDA V + MP E + ++ G
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKG 421
Query: 405 CRIHGDTELASYVADRVFEQG 425
HG A + R+ + G
Sbjct: 422 YAQHGHGTEALLLYQRMLDSG 442
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 323/643 (50%), Gaps = 76/643 (11%)
Query: 27 NHLLALTHS-RSLRRGLQLHAHIIKTGLETIPLLSHHLI---NFYSKTQLPNSSLQVFNS 82
+H L+L +S ++LR Q+H IK G++T + LI LP + ++
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYAR-RLLLC 64
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHV 141
P A +++L+ ++++D PH ++ F +M+R G + PD K+ S+
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSG------- 194
G +H ALK +FV ++L+ MY CG + +AR VFDEM N+V+W+
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 195 ------------------------MIYGYVQLGEDEEALRLFKQVLVEEDV-------GV 223
M+ GY++ GE E A R+F ++ +DV G+
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 224 -----------------------NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
N+ +L+ VL C S E GK +HG+ K +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQ-VRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
V ++LI +YS+CG V A FE +Q R + W +M+ A H LF +M +
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G V P+ I+F+ +L+ACSHAGL+E+G+ YF MK+ Y IEP +HY MVDL GR+GKL
Sbjct: 365 YG-VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 380 QDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXX 439
Q A I +MP+ PT VW LL C HG+ ELA V R+ E +SG VLLSN
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 440 XXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEE-- 497
K + Q IKK T S VE G ++ F AG++ +E + KL+E
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEII 543
Query: 498 --LGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNL 555
L DE AGY + + L +V EEK + HSE+LA+AF L + IR++KNL
Sbjct: 544 LRLKDE---AGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNL 600
Query: 556 RVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
R+C DCH +K SK+ G ++VRD NRFH F+DG C+C DYW
Sbjct: 601 RICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 341 bits (875), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 311/569 (54%), Gaps = 11/569 (1%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKT---QLPNSSLQV--FNSSPHRSATTW 91
S+++ ++H+H+I GL+ P + +HL+ F + + L ++ L F+S P S + W
Sbjct: 17 SMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDP--STSDW 74
Query: 92 SSLISSFAQNDLPHLALDFFRQMLRIGL-LPDDHILPTAAKSCAALSSIHVGLSLHALAL 150
+ LI F+ + P ++ F+ +ML + PD A KSC + SI L +H +
Sbjct: 75 NYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVI 134
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
++ + D VA+SLV Y+ G + A VFDEMP R++VSW+ MI + +G +AL
Sbjct: 135 RSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALS 194
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
++K+ + E V + +TL ++L C + L +G +H +S FV+++LI +Y
Sbjct: 195 MYKR-MGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
+KCG++E A F ++ R++ WN+M+I H H F +M + GV+PN ITF
Sbjct: 254 AKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA-SGVRPNAITF 312
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
L +L CSH GLV++G +FE+M + + P +HY MVDL GRAG+L++++++I
Sbjct: 313 LGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 391 MEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXX 450
+W LL C+IH + EL ++ + ++G VL+++
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFAS 432
Query: 451 XXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVA- 509
K++R ++ G SW+E G++VH F D+ H ++ IY++L E+ + AGY
Sbjct: 433 MRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPE 492
Query: 510 DTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFIS 569
D++ + HSE+LAIA+GL+ +R+ KNLRVC DCH+ K++S
Sbjct: 493 DSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVS 552
Query: 570 KITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
K R +IVRD RFH F DG C+C DYW
Sbjct: 553 KAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 141/283 (49%), Gaps = 9/283 (3%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
+S+ + L++H +I++G +++ L+ YS + +VF+ P R +W+ +I
Sbjct: 121 KSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMI 180
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
F+ L + AL +++M G+ D + L SCA +S++++G+ LH +A
Sbjct: 181 CCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCE 240
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
VFV+++L+DMYAKCG + A VF+ M R+V++W+ MI GY G EA+ F++
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRK- 299
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA--SSLISLYSKC 273
+V V N T +L C L++ G + H + F + V ++ LY +
Sbjct: 300 MVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRA 358
Query: 274 GAVEGAYQAFEELQV-RNLGMWNAMLIACAQHAHTNRTFELFE 315
G +E + + + +W +L +C H R EL E
Sbjct: 359 GQLENSLEMIYASSCHEDPVLWRTLLGSCKIH----RNLELGE 397
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 20 GNYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQV 79
G+ T+ L + H +L G+ LH E+ +S+ LI+ Y+K +++ V
Sbjct: 206 GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGV 265
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
FN R TW+S+I + + A+ FFR+M+ G+ P+ C+ +
Sbjct: 266 FNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLV 325
Query: 140 HVGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYA-RNVFDEMPHRNVVSW---- 192
G+ H + + +HL V +VD+Y + G++ + ++ H + V W
Sbjct: 326 KEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
Query: 193 -SGMIYGYVQLGE 204
S I+ ++LGE
Sbjct: 385 GSCKIHRNLELGE 397
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 338 bits (866), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 321/577 (55%), Gaps = 17/577 (2%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSH-HLINFYSKTQLPNSSLQVFNSSPHRS 87
L A +H S + G ++H H +++ +ET ++ +++ YSK + + ++FN R+
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN 297
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQML-RIGLLPD----DHILPTAAKSCAALSSIHVG 142
W+ +I +A+N A F++M + GL PD ++LP +A I G
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA--------ILEG 349
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
++H A++ + + + ++L+DMY +CG++ A +FD M +NV+SW+ +I YVQ
Sbjct: 350 RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQN 409
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV 262
G++ AL LF++ L + + + T++S+L S L G++IH + K+ + S+ +
Sbjct: 410 GKNYSALELFQE-LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+SL+ +Y+ CG +E A + F + ++++ WN++++A A H + LF +M +
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA-SR 527
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
V PN TF +L ACS +G+V++G YFE MK++YGI+PG +HY M+DL+GR G A
Sbjct: 528 VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAA 587
Query: 383 VQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXX 442
+ +EEMP PT +WG+LL R H D +A + A+++F+ H ++G VLL N
Sbjct: 588 KRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEA 647
Query: 443 XXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
++ +GI + + S VE + H F GDRSH T +IY L+ + +
Sbjct: 648 GRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMV 707
Query: 503 AKAG-YVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDC 561
+ YV S + E + ++ + R HS RLA FGLI+ R + V N R+C C
Sbjct: 708 GEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKC 767
Query: 562 HTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
H ++ S++T R ++V D+ FH F +G+C+CG+YW
Sbjct: 768 HEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 176/349 (50%), Gaps = 9/349 (2%)
Query: 57 PLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLR 116
P L+ L F + ++L +LQ+F+ A W+ +I F L A+ F+ +M+
Sbjct: 65 PALTRALRGF-ADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVF 123
Query: 117 IGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGY 176
G+ D P KS A +SS+ G +HA+ +K + DV+V +SL+ +Y K G
Sbjct: 124 AGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD 183
Query: 177 ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCG 236
A VF+EMP R++VSW+ MI GY+ LG+ +L LFK++L + + F+ S L C
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML-KCGFKPDRFSTMSALGACS 242
Query: 237 ASTLLELGKQIHGWCFKTSFDS-SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWN 295
++GK+IH ++ ++ V +S++ +YSK G V A + F + RN+ WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 296 AMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKK 355
M+ A++ F F++M G++P+ IT + +L A A L + H + + +
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA--SAILEGRTIHGYAMRR- 359
Query: 356 DYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
G P ++D+ G G+L+ A + + M E W +++
Sbjct: 360 --GFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAA 405
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 191/375 (50%), Gaps = 10/375 (2%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
SL G ++HA +IK G + + + LI+ Y K + +VF P R +W+S+IS
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
+ +L F++ML+ G PD +A +C+ + S +G +H A+++
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 157 -DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
DV V +S++DMY+K GE+ YA +F+ M RN+V+W+ MI Y + G +A F++
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK- 323
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
+ E G+ ++S+ + AS +LE G+ IHG+ + F + ++LI +Y +CG
Sbjct: 324 -MSEQNGLQPDVITSI-NLLPASAILE-GRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
++ A F+ + +N+ WN+++ A Q+ ELF+++ V P+ T +L
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTIASILP 439
Query: 336 ACSHA-GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
A + + L E + + ++K Y + ++V + G L+DA + + ++
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYW--SNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Query: 395 ESVWGALLTGCRIHG 409
S W +++ +HG
Sbjct: 498 VS-WNSIIMAYAVHG 511
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
TI + L A S SL G ++HA+I+K+ + ++ + L++ Y+ + + FN
Sbjct: 433 TIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI 492
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
+ +W+S+I ++A + +++ F +M+ + P+ + +C+ + G
Sbjct: 493 LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGW 552
Query: 144 SLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP 185
++K Y +D + ++D+ + G A+ +EMP
Sbjct: 553 EYFE-SMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 273/492 (55%), Gaps = 1/492 (0%)
Query: 107 ALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVD 166
AL F+ +M++ G PD+ P K+C L SI G +H K DVFV +SL++
Sbjct: 116 ALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLIN 175
Query: 167 MYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF 226
MY +CGE+ + VF+++ + SWS M+ +G E L LF+ + E ++ +
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 227 TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
+ S L C + L LG IHG+ + + + V +SL+ +Y KCG ++ A F+++
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 287 QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG 346
+ RN ++AM+ A H +F +M G++P+ + ++ VL ACSH+GLV++G
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIK-EGLEPDHVVYVSVLNACSHSGLVKEG 354
Query: 347 QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCR 406
+ F M K+ +EP ++HY +VDLLGRAG L++A++ I+ +P+E + +W L+ CR
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCR 414
Query: 407 IHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGL 466
+ + EL A + + + G +L+SN + +G+K+ G
Sbjct: 415 VRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGF 474
Query: 467 SWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQT 526
S VE + H F + DRSH K EIY L ++ ++ GY D + +L V EEK +
Sbjct: 475 SIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKER 534
Query: 527 IRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHR 586
++ HS+++AIAFGL+ P I++ +NLR+C DCHT K IS I R ++VRD NRFH
Sbjct: 535 LKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHL 594
Query: 587 FEDGKCTCGDYW 598
F+ G C+C DYW
Sbjct: 595 FKGGTCSCKDYW 606
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 141/276 (51%), Gaps = 4/276 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A T +S+R G Q+H + K GLE + + LIN Y + S VF ++A
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQML-RIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
+WSS++S+ A + L FR M L ++ + +A +CA ++++G+S+H
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
L+ L++ V +SLVDMY KCG + A ++F +M RN +++S MI G GE E
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT-SFDSSCFVASSL 266
ALR+F + +++E + + SVL C S L++ G+++ K + + L
Sbjct: 319 ALRMFSK-MIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCL 377
Query: 267 ISLYSKCGAVEGAYQAFEELQV-RNLGMWNAMLIAC 301
+ L + G +E A + + + + +N +W L C
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 169 AKCGEIG------YARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
AKC G YA ++F + ++ MI GYV + EEAL + + +++
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNE-MMQRGNE 129
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
++FT +L+ C + GKQIHG FK ++ FV +SLI++Y +CG +E +
Sbjct: 130 PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAV 189
Query: 283 FEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGL 342
FE+L+ + W++M+ A A + LF M S +K + L AC++ G
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGA 249
Query: 343 VEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
+ G + ++ E ++VD+ + G L A+ + ++M + + A++
Sbjct: 250 LNLGMSIHGFLLRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMI 307
Query: 403 TGCRIHGDTELASYVADRVFEQG 425
+G +HG+ E A + ++ ++G
Sbjct: 308 SGLALHGEGESALRMFSKMIKEG 330
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 279/520 (53%), Gaps = 40/520 (7%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N + + L A + + +G+Q+H+ I K+ + + L++ YSK N + +VF
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ R+ +W+SLI+ F QN ALD F+ ML + PD+ L + +CA+LS+I
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270
Query: 141 VGLSLHALALKT-AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP-------------- 185
VG +H +K D+ ++++ VDMYAKC I AR +FD MP
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 186 -----------------HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTL 228
RNVVSW+ +I GY Q GE+EEAL LF +L E V ++
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-CLLKRESVCPTHYSF 389
Query: 229 SSVLRVCGASTLLELGKQI------HGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
+++L+ C L LG Q HG+ F++ + FV +SLI +Y KCG VE Y
Sbjct: 390 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 283 FEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGL 342
F ++ R+ WNAM+I AQ+ + N ELF +M G KP+ IT + VL AC HAG
Sbjct: 450 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE-SGEKPDHITMIGVLSACGHAGF 508
Query: 343 VEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
VE+G+HYF M +D+G+ P HY MVDLLGRAG L++A +IEEMPM+P +WG+LL
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Query: 403 TGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKK 462
C++H + L YVA+++ E +SG VLLSN K +R +G+ K
Sbjct: 569 AACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628
Query: 463 ETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
+ G SW++ H F D+SH + +I++ L+ L EM
Sbjct: 629 QPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 206/434 (47%), Gaps = 71/434 (16%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSK-----------TQLPNSSL--------------- 77
+HA +IK+G + + LI+ YSK ++P ++
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 78 -----QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKS 132
+F S P R TW+S++S FAQ+D AL +F M + G + +++ + +
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 133 CAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSW 192
C+ L+ ++ G+ +H+L K+ + DV++ S+LVDMY+KCG + A+ VFDEM RNVVSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 193 SGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF 252
+ +I + Q G EAL +F Q+++E V ++ TL+SV+ C + + +++G+++HG
Sbjct: 222 NSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 253 KTS----------------------------FDS----SCFVASSLISLYSKCGAVEGAY 280
K FDS + +S+IS Y+ + + A
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
F ++ RN+ WNA++ Q+ LF +K V P +F +L AC+
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR-ESVCPTHYSFANILKACADL 399
Query: 341 GLVEKG-QHYFELMKKDYGIEPGSQHYA----TMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
+ G Q + ++K + + G + +++D+ + G +++ V +M ME
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDC 458
Query: 396 SVWGALLTGCRIHG 409
W A++ G +G
Sbjct: 459 VSWNAMIIGFAQNG 472
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 163/339 (48%), Gaps = 37/339 (10%)
Query: 121 PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNV 180
P +L + KS LS+I+V +HA +K+ + ++F+ + L+D Y+KCG + R V
Sbjct: 21 PFAKLLDSCIKS--KLSAIYVRY-VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 181 FDEMPHRNV-------------------------------VSWSGMIYGYVQLGEDEEAL 209
FD+MP RN+ +W+ M+ G+ Q EEAL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
F ++ +E +N+++ +SVL C + G Q+H K+ F S ++ S+L+ +
Sbjct: 138 CYFA-MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 270 YSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
YSKCG V A + F+E+ RN+ WN+++ Q+ ++F QM V+P+ +T
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVT 255
Query: 330 FLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
V+ AC+ ++ GQ + K+ + VD+ + ++++A + + M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 390 PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVS 428
P+ + ++++G + T+ A + ++ E+ VS
Sbjct: 316 PIRNVIAE-TSMISGYAMAASTKAARLMFTKMAERNVVS 353
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 300/560 (53%), Gaps = 9/560 (1%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
R G +HA++I TG + + L Y + ++F+ + +W+++IS +
Sbjct: 314 RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
N LP A+D +R M + + PD+ + +CA L + G+ LH LA+K V
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV--L 216
VA++L++MY+KC I A ++F +P +NV+SW+ +I G EAL +Q+
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT 493
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
++ + L++ R+ GA L GK+IH +T F+ ++L+ +Y +CG +
Sbjct: 494 LQPNAITLTAALAACARI-GA---LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
A+ F Q +++ WN +L ++ + ELF++M V+P+ ITF+ +L
Sbjct: 550 NTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVK-SRVRPDEITFISLLCG 607
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
CS + +V +G YF M+ DYG+ P +HYA +VDLLGRAG+LQ+A + I++MP+ P +
Sbjct: 608 CSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLR 456
VWGALL CRIH +L A +FE S G +LL N +M++
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMK 726
Query: 457 DQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLK 516
+ G+ + G SWVE +VH F + D+ H +T EI LE ++M++ G +
Sbjct: 727 ENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSM 786
Query: 517 EVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVL 576
+ +++ HSER AIAFGLI PI V KNL +C +CH +KFISK R +
Sbjct: 787 DETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREI 846
Query: 577 IVRDNNRFHRFEDGKCTCGD 596
VRD FH F+DG+C+CGD
Sbjct: 847 SVRDAEHFHHFKDGECSCGD 866
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 188/390 (48%), Gaps = 14/390 (3%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L RG ++H H+++ G E + + LI Y K S+ +F+ P R +W+++IS
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ +N + H L+ F M + + PD L + +C L +G +HA + T + +D
Sbjct: 272 YFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ V +SL MY G A +F M +++VSW+ MI GY ++A+ ++ ++
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR-MMD 390
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
++ V ++ T+++VL C L+ G ++H K S VA++LI++YSKC ++
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFE---LFEQMKSVGGVKPNFITFLCVL 334
A F + +N+ W +++ A NR FE QMK ++PN IT L
Sbjct: 451 KALDIFHNIPRKNVISWTSII---AGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAAL 505
Query: 335 YACSHAGLVEKGQH-YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
AC+ G + G+ + +++ G++ + ++D+ R G++ A +
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRCGRMNTAWSQFNSQKKDV 563
Query: 394 TESVWGALLTGCRIHGDTELASYVADRVFE 423
T W LLTG G + + DR+ +
Sbjct: 564 TS--WNILLTGYSERGQGSMVVELFDRMVK 591
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 157/307 (51%), Gaps = 18/307 (5%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G++LH IK L + +++++LIN YSK + + +L +F++ P ++ +W+S+I+
Sbjct: 414 LDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
N+ AL F RQM ++ L P+ L A +CA + ++ G +HA L+T LD
Sbjct: 474 LRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
F+ ++L+DMY +CG + A + F+ ++V SW+ ++ GY + G+ + LF + +V
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDR-MV 590
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+ V ++ T S+L C S ++ G + + ++ L + G ++
Sbjct: 591 KSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQ 650
Query: 278 GAYQAFEELQVR-NLGMWNAMLIACAQHAHTN-------RTFELFEQMKSVGGVKPNFIT 329
A++ +++ V + +W A+L AC H + FEL KSVG +
Sbjct: 651 EAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFEL--DKKSVG-----YYI 703
Query: 330 FLCVLYA 336
LC LYA
Sbjct: 704 LLCNLYA 710
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 118/235 (50%), Gaps = 1/235 (0%)
Query: 107 ALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVD 166
A+ M + + D+ + + C + G ++++AL + L V + ++ +
Sbjct: 78 AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA 137
Query: 167 MYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF 226
M+ + G + A VF +M RN+ SW+ ++ GY + G +EA+ L+ ++L V + +
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 227 TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
T VLR CG L GK++H + ++ V ++LI++Y KCG V+ A F+ +
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 287 QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
R++ WNAM+ ++ + ELF M+ + V P+ +T V+ AC G
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGL-SVDPDLMTLTSVISACELLG 311
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
+L G ++HAH+++TG+ L + L++ Y + N++ FNS + T+W+ L++
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLT 571
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
+++ + ++ F +M++ + PD+ + C+ + GL +
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMP 185
++ + +VD+ + GE+ A +MP
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMP 660
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 309/575 (53%), Gaps = 33/575 (5%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSS--LQVFNSSPHRSATTWSSLISSFAQ 100
QL +H + G L L+ + + + S +Q+F P W+++I FA
Sbjct: 21 QLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAG 80
Query: 101 NDLPHLALDFFRQML----------RIGLLPDDHILPTAAKS--CAALSSIHVGLSLHAL 148
+ P LA ++R ML R+ L L A++ +A+ +H ++ L
Sbjct: 81 SSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGL 140
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
+ D + ++L+D Y+K G++ A +FDEMP R+V SW+ +I G V EA
Sbjct: 141 SA------DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEA 194
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQI-HGWCFKTSFDSSCFVASSLI 267
+ L+K+ + E + ++ T+ + L C ++ G+ I HG+ + + V+++ I
Sbjct: 195 MELYKR-METEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAI 248
Query: 268 SLYSKCGAVEGAYQAFEELQ-VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+YSKCG V+ AYQ FE+ +++ WN M+ A H +R E+F++++ G+KP+
Sbjct: 249 DMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED-NGIKPD 307
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
+++L L AC HAGLVE G F M G+E +HY +VDLL RAG+L++A +I
Sbjct: 308 DVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDII 366
Query: 387 EEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXX 446
M M P +W +LL I+ D E+A + + E G + G VLLSN
Sbjct: 367 CSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWK 426
Query: 447 XXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAG 506
+ + +KK GLS++E +H F D+SH + EIY K++E+ ++ + G
Sbjct: 427 DVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDG 486
Query: 507 YVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFP---QERPIRVMKNLRVCGDCHT 563
YVA T VL ++G EEK + YHSE+LA+A+GL+ +E P+RV+ NLR+CGDCH
Sbjct: 487 YVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHV 546
Query: 564 AIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
K ISKI R +IVRD RFHRF+DG C+C D+W
Sbjct: 547 VFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 308/581 (53%), Gaps = 10/581 (1%)
Query: 27 NHLLALTHSRSLRRGL-QLHAHIIKTGLETIPLLSHHLINFYSKTQLP---NSSLQVFNS 82
+HLL+L S + + L Q+HA +++T L + HH ++ + + +P N S +VF+
Sbjct: 12 DHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQ 71
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPT-AAKSCAALSSIHV 141
+ + + +++I +F+ + P FR + R LP + + + A K C +
Sbjct: 72 RLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLG 131
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
GL +H + D + ++L+D+Y+ C A VFDE+P R+ VSW+ + Y++
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 202 LGEDEEALRLFKQVLVEED--VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
+ L LF ++ + D V + T L+ C L+ GKQ+H + + +
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
++++L+S+YS+CG+++ AYQ F ++ RN+ W A++ A + E F +M
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKK-DYGIEPGSQHYATMVDLLGRAGK 378
G + P T +L ACSH+GLV +G +F+ M+ ++ I+P HY +VDLLGRA
Sbjct: 312 FG-ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNX 438
L A +I+ M M+P ++W LL CR+HGD EL V + E +G VLL N
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNT 430
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
+++++ I + G S +E VH F D SH + EIY L E+
Sbjct: 431 YSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEI 490
Query: 499 GDEMAKAGYVADTSFVLKEV-GGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRV 557
++ AGYVA+ + L + EEK +RYHSE+LAIAFG++ P IRV KNLR
Sbjct: 491 NQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRT 550
Query: 558 CGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
C DCH KF+S + R++IVRD +RFH F+ G C+C D+W
Sbjct: 551 CVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/435 (37%), Positives = 251/435 (57%), Gaps = 4/435 (0%)
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
+++ K GE G A+ V +NV++W+ MI GYV+ + EEAL+ K +L D+
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
N F+ +S L C L K +H + + + ++S+L+ +Y+KCG + + + F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
++ ++ +WNAM+ A H +F +M++ V P+ ITFL +L CSH GL+
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEA-EHVSPDSITFLGLLTTCSHCGLL 282
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
E+G+ YF LM + + I+P +HY MVDLLGRAG++++A ++IE MP+EP +W +LL+
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Query: 404 GCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKE 463
R + + EL + SG VLLSN +++ +GI+K
Sbjct: 343 SSRTYKNPELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Query: 464 TGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEK 523
G SW+E G +H F AGD SH +T IY LE L + G+V+DT VL +V EEK
Sbjct: 400 KGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEK 459
Query: 524 NQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNR 583
+ + YHSE+LA+A+ ++ IR+ KN+R+C DCH IK +SK+ RV+I+RD R
Sbjct: 460 EENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIR 519
Query: 584 FHRFEDGKCTCGDYW 598
FHRFEDG C+C DYW
Sbjct: 520 FHRFEDGLCSCRDYW 534
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 136/283 (48%), Gaps = 11/283 (3%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAAL 136
+V ++ ++ TW+ +I + +N AL + ML + P+ ++ +CA L
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL 178
Query: 137 SSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMI 196
+H +H+L + + L+ ++S+LVD+YAKCG+IG +R VF + +V W+ MI
Sbjct: 179 GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMI 238
Query: 197 YGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT-S 255
G+ G EA+R+F + + E V + T +L C LLE GK+ G + S
Sbjct: 239 TGFATHGLATEAIRVFSE-MEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFS 297
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELF 314
+++ L + G V+ AY+ E + + ++ +W ++L + T + EL
Sbjct: 298 IQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL----SSSRTYKNPELG 353
Query: 315 E-QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKD 356
E ++++ K L +Y+ + E Q ELM K+
Sbjct: 354 EIAIQNLSKAKSGDYVLLSNIYSSTKKW--ESAQKVRELMSKE 394
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+H+ +I +G+E +LS L++ Y+K +S +VF S + W+++I+ FA + L
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 104 PHLALDFFRQMLRIGLLPDDHI---LPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
A+ F +M + PD L T C L L + L+ +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMI-----YGYVQLGE 204
A +VD+ + G + A + + MP +VV W ++ Y +LGE
Sbjct: 307 A--MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGE 354
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 196/679 (28%), Positives = 325/679 (47%), Gaps = 105/679 (15%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ L ++ G Q+H ++++ GLE+ + + LI YS+ S +VFNS
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 84 PHRSAT-----------------------------------TWSSLISSFAQNDLPHLAL 108
R+ + TW+SL+S +A L A+
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 109 DFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMY 168
++M GL P + + ++ A + +G ++H L+ DV+V ++L+DMY
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 169 AKCGEIGYARNVFDEMPHRNVVSW----SGMIY--------------------------- 197
K G + YAR VFD M +N+V+W SG+ Y
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 198 ----GYVQLGEDEEALRLFKQV----------------------------------LVEE 219
GY LG+ E+AL + ++ + EE
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
VG N T+S++L++ G +LL GK++HG+C + + +VA++L+ +Y K G ++ A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSH 339
+ F ++ ++L WN ML+ A F M G++P+ ITF VL C +
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE-AGMEPDAITFTSVLSVCKN 509
Query: 340 AGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWG 399
+GLV++G YF+LM+ YGI P +H + MVDLLGR+G L +A I+ M ++P ++WG
Sbjct: 510 SGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWG 569
Query: 400 ALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQG 459
A L+ C+IH D ELA R+ +S +++ N ++R+
Sbjct: 570 AFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNR 629
Query: 460 IKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVG 519
++ + SW++ VH F A ++H +IY +L +L EM K+GYV DTS + +++
Sbjct: 630 VRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDIS 689
Query: 520 GEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVR 579
EK + + H+E+LA+ +GLI PIRV+KN +C D HT K++S + R ++++
Sbjct: 690 DSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQ 749
Query: 580 DNNRFHRFEDGKCTCGDYW 598
+ R H F DGKC+C D W
Sbjct: 750 EGARVHHFRDGKCSCNDSW 768
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 131/241 (54%), Gaps = 4/241 (1%)
Query: 141 VGLSLHALALKTAY-HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
+GL++H +K + D V S+ + Y +C +G+A +FDEMP R+ ++W+ ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
++ G E+A+ LF+++ D T+ +L+VC G+QIHG+ + +S+
Sbjct: 65 LRSGNWEKAVELFREMQFS-GAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
+ +SLI +YS+ G +E + + F ++ RNL WN++L + + + + L ++M+
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME- 182
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
+ G+KP+ +T+ +L + GL + + M+ G++P + ++++ + G L
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
Query: 380 Q 380
+
Sbjct: 242 K 242
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 190/451 (42%), Gaps = 59/451 (13%)
Query: 41 GLQLHAHIIKTGLE-TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
GL +H +IK GL+ + + + FY + + ++F+ P R W+ ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
++ A++ FR+M G D + + C+ G +H L+ +V
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV---- 215
+ +SL+ MY++ G++ +R VF+ M RN+ SW+ ++ Y +LG ++A+ L ++
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 216 -------------------LVEEDVGV-----------NDFTLSSVLRVCGASTLLELGK 245
L ++ + V + ++SS+L+ L+LGK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHA 305
IHG+ + +V ++LI +Y K G + A F+ + +N+ WN+ L++ +A
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS-LVSGLSYA 304
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQH 365
+ E G+KP+ IT+ + + G EK MK+ G+ P
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVS 363
Query: 366 YATMVDLLGRAGKLQDAVQVIEEMPME---PTESVWGALL----------TGCRIHG--- 409
+ + + G ++A++V +M E P + LL +G +HG
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 410 ------DTELASYVADRVFEQGHVSSGLNVL 434
D +A+ + D + G + S + +
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIF 454
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/641 (30%), Positives = 317/641 (49%), Gaps = 74/641 (11%)
Query: 27 NHLLALTH----SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
+H ++L H + SLR +HA I++ G+ + ++ L++ S + P+ SL +F +
Sbjct: 30 SHFISLIHACKDTASLR---HVHAQILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSIFRN 85
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
S R+ ++LI +N ++ F MLR+G+ PD P KS + L +G
Sbjct: 86 SEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLG 145
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDE------------------- 183
+LHA LK D FV SLVDMYAK G++ +A VF+E
Sbjct: 146 RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING 205
Query: 184 ----------------MPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV------------ 215
MP RN SWS +I GYV GE A +LF+ +
Sbjct: 206 YCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLI 265
Query: 216 ------------------LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
++E+ + N++T+++VL C S L G +IHG+
Sbjct: 266 NGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK 325
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
+ ++L+ +Y+KCG ++ A F + +++ W AM+ A H ++ + F QM
Sbjct: 326 LDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
G KP+ + FL VL AC ++ V+ G ++F+ M+ DY IEP +HY +VDLLGRAG
Sbjct: 386 M-YSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAG 444
Query: 378 KLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSN 437
KL +A +++E MP+ P + W AL C+ H A V+ + E G + L
Sbjct: 445 KLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDK 504
Query: 438 XXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEE 497
L+ + ++ G S++E +++ F+AGD SH T EI KL+E
Sbjct: 505 THASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDE 564
Query: 498 LGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRV 557
+ + GY + + ++ EEK HSE+LA+ G + IR++KNLR+
Sbjct: 565 IISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRI 624
Query: 558 CGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
CGDCH+ +K++SKI+ R +++RD +FH F+DG+C+CGDYW
Sbjct: 625 CGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N TI L A + S +L G+++H +I+ G++ + L++ Y+K + + VF
Sbjct: 292 NEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVF 351
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
++ H+ +W+++I +A + H A+ FRQM+ G PD+ + +C S +
Sbjct: 352 SNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVD 411
Query: 141 VGLSLHALALKTAYHLDVFVASSL------VDMYAKCGEIGYARNVFDEMP-HRNVVSWS 193
+GL+ + LD + +L VD+ + G++ A + + MP + ++ +W+
Sbjct: 412 LGLNFF-----DSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWA 466
Query: 194 GM 195
+
Sbjct: 467 AL 468
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/556 (34%), Positives = 295/556 (53%), Gaps = 7/556 (1%)
Query: 45 HAHIIKTGLETIPL-LSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
H + GLE + + L++ Y K + V + + ++LI ++Q
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
A+ F+ ML + P+++ + SC L I G +H L +K+ + + +S
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+ MY +C + + VF + + N VSW+ +I G VQ G +E AL F++++ + +
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM-RDSIKP 366
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
N FTLSS LR C + E G+QIHG K FD + S LI LY KCG + A F
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVF 426
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
+ L ++ N M+ + AQ+ +LFE+M ++G ++PN +T L VL AC+++ LV
Sbjct: 427 DTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLG-LQPNDVTVLSVLLACNNSRLV 485
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
E+G F+ +KD I + HYA MVDLLGRAG+L++A + E+ + P +W LL+
Sbjct: 486 EEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLS 543
Query: 404 GCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKE 463
C++H E+A + ++ E G +L+SN ++D +KK
Sbjct: 544 ACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKN 603
Query: 464 TGLSWVEEGNRVHTFAAGDR-SHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEE 522
+SWVE HTF AGD SH + +I LEEL + GYV D S V +++
Sbjct: 604 PAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETA 663
Query: 523 KNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNN 582
K +++ HSE+LAIAF + IR++KNLRVC DCH+ IK +S++ R +I RD+
Sbjct: 664 KERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSK 722
Query: 583 RFHRFEDGKCTCGDYW 598
RFH F DG C+CGDYW
Sbjct: 723 RFHHFRDGSCSCGDYW 738
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 178/343 (51%), Gaps = 5/343 (1%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
RS+ + AH++K+G + L++ K + + QVF+ R TW+SLI
Sbjct: 79 RSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLI 137
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
+ ++ A++ +R M+ +LPD++ L + K+ + LS H LA+
Sbjct: 138 AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLE 197
Query: 156 L-DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
+ +VFV S+LVDMY K G+ A+ V D + ++VV + +I GY Q GED EA++ F+
Sbjct: 198 VSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQS 257
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG 274
+LVE+ V N++T +SVL CG + GK IHG K+ F+S+ +SL+++Y +C
Sbjct: 258 MLVEK-VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
V+ + + F+ ++ N W +++ Q+ F +M +KPN T L
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR-DSIKPNSFTLSSAL 375
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
CS+ + E+G+ ++ K YG + + ++DL G+ G
Sbjct: 376 RGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCG 417
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 151/299 (50%), Gaps = 9/299 (3%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + L++ + + + G +H ++K+G E+ L+ Y + L + SL+VF
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ + +W+SLIS QN +AL FR+M+R + P+ L +A + C+ L+
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G +H + K + D + S L+D+Y KCG AR VFD + +V+S + MIY Y
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 445
Query: 201 QLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
Q G EAL LF++++ ++G+ ND T+ SVL C S L+E G ++ K
Sbjct: 446 QNGFGREALDLFERMI---NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIML 502
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
+ + ++ L + G +E A E+ +L +W +L AC H R E+ E++
Sbjct: 503 TNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVH----RKVEMAERI 557
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 147/296 (49%), Gaps = 6/296 (2%)
Query: 120 LPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARN 179
L H + C SI ++ A LK+ + ++ S LVD KCG+I YAR
Sbjct: 62 LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQ 120
Query: 180 VFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGAST 239
VFD M R++V+W+ +I ++ +EA+ +++ +++ +V +++TLSSV + +
Sbjct: 121 VFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYR-LMITNNVLPDEYTLSSVFKAFSDLS 179
Query: 240 LLELGKQIHGWCFKTSFD-SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAML 298
L + ++ HG + S+ FV S+L+ +Y K G A + ++ +++ + A++
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 299 IACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYG 358
+ +Q + F+ M V V+PN T+ VL +C + + G+ LM K G
Sbjct: 240 VGYSQKGEDTEAVKAFQSM-LVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS-G 297
Query: 359 IEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
E +++ + R + D+++V + + P + W +L++G +G E+A
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMA 352
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 325 bits (832), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 265/473 (56%), Gaps = 4/473 (0%)
Query: 42 LQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQN 101
Q HAHI+K GL++ P + + LI+ YS + L + + ++F+ + + TW+++I F +N
Sbjct: 123 FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA-YHLDVFV 160
A+ +F +M + G+ ++ + + K+ + + G S+H L L+T DVF+
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
SSLVDMY KC A+ VFDEMP RNVV+W+ +I GYVQ ++ + +F+++L + D
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML-KSD 301
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
V N+ TLSSVL C L G+++H + K S + + ++LI LY KCG +E A
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
FE L +N+ W AM+ A H + F+LF M S V PN +TF+ VL AC+H
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLS-SHVSPNEVTFMAVLSACAHG 420
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
GLVE+G+ F MK + +EP + HYA MVDL GR G L++A +IE MPMEPT VWGA
Sbjct: 421 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 401 LLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGI 460
L C +H D EL Y A RV + SG LL+N K ++DQ +
Sbjct: 481 LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 540
Query: 461 KKETGLSWVEEGNRVHTFAA-GDRSHAKTVEIYNKLEELGDEMAKAGYVADTS 512
K G SW+E ++ F A D+ ++ ++Y L+ +G +M + D +
Sbjct: 541 VKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVT 593
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 7/191 (3%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N +T+ + L A H +L RG ++H ++IK +E LI+ Y K ++ VF
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
++ TW+++I+ FA + A D F ML + P++ +CA +
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 424
Query: 141 VGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR--NVVSWSGMI 196
G L L++K ++++ + +VD++ + G + A+ + + MP NVV W G +
Sbjct: 425 EGRRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVV-W-GAL 481
Query: 197 YGYVQLGEDEE 207
+G L +D E
Sbjct: 482 FGSCLLHKDYE 492
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 188/550 (34%), Positives = 289/550 (52%), Gaps = 40/550 (7%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + L A + R G+Q+H I+K+G +T + LI+ Y+K + S+ +
Sbjct: 226 NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALL 285
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS--S 138
+W+S+I + L AL F +M + DD +P+ +C ALS
Sbjct: 286 EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFALSRTE 344
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+ + S H L +KT Y V ++LVDMYAK G + A VF+ M ++V+SW+ ++ G
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTG 404
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
G +EAL+LF + V + + +SVL TLLE G+Q+HG K+ F S
Sbjct: 405 NTHNGSYDEALKLFCNMRVG-GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPS 463
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
S V +SL+++Y+KCG++E A F +++R+L
Sbjct: 464 SLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDL--------------------------- 496
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
IT+ C++ + GL+E Q YF+ M+ YGI PG +HYA M+DL GR+G
Sbjct: 497 ---------ITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGD 547
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNX 438
Q++ +M +EP +VW A+L R HG+ E A + E ++ V LSN
Sbjct: 548 FVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNM 607
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
++++ + I KE G SWVEE +VH+F + DR H + VEIY+K++E+
Sbjct: 608 YSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEM 667
Query: 499 GDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVC 558
+ +AGY AD SF L ++ E K + YHSE+LA+AFGL+ P PIR++KNLRVC
Sbjct: 668 MLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVC 727
Query: 559 GDCHTAIKFI 568
GDCH+A+K +
Sbjct: 728 GDCHSAMKLL 737
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 200/384 (52%), Gaps = 6/384 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS-SPHRSATTWSSLIS 96
L RG Q+H H IKTG + + + L+ Y++ + + + +F + ++ TW+S+++
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
++QN A++ FR + R G + + P+ +CA++S+ VG+ +H +K+ +
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
+++V S+L+DMYAKC E+ AR + + M +VVSW+ MI G V+ G EAL +F + +
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR-M 319
Query: 217 VEEDVGVNDFTLSSVLRVCGAS-TLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
E D+ ++DFT+ S+L S T +++ H KT + + V ++L+ +Y+K G
Sbjct: 320 HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI 379
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
++ A + FE + +++ W A++ + + +LF M+ VGG+ P+ I VL
Sbjct: 380 MDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMR-VGGITPDKIVTASVLS 438
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
A + L+E GQ K G ++V + + G L+DA + M +
Sbjct: 439 ASAELTLLEFGQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI 497
Query: 396 SVWGALLTGCRIHGDTELASYVAD 419
+ W L+ G +G E A D
Sbjct: 498 T-WTCLIVGYAKNGLLEDAQRYFD 520
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 176/345 (51%), Gaps = 8/345 (2%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+I YS ++ + + ++F S+P ++ +W++LIS + ++ A + F +M G+ P+
Sbjct: 65 MIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPN 124
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
++ L + + C +L + G +H +KT + LDV V + L+ MYA+C I A +F+
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 183 EMP-HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLL 241
M +N V+W+ M+ GY Q G +A+ F+ L E N +T SVL C + +
Sbjct: 185 TMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD-LRREGNQSNQYTFPSVLTACASVSAC 243
Query: 242 ELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIAC 301
+G Q+H K+ F ++ +V S+LI +Y+KC +E A E ++V ++ WN+M++ C
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 302 AQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL--YACSHAGLVEKGQHYFELMKKDYGI 359
+ +F +M +K + T +L +A S + + ++K Y
Sbjct: 304 VRQGLIGEALSMFGRMHE-RDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYAT 362
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+ +VD+ + G + A++V E M +E W AL+TG
Sbjct: 363 YKLVNN--ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 5/254 (1%)
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
D F ++++ Y+ + A +F P +N +SW+ +I GY + G EA LF + +
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE-M 116
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
+ + N++TL SVLR+C + LL G+QIHG KT FD V + L+++Y++C +
Sbjct: 117 QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRI 176
Query: 277 EGAYQAFEELQ-VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
A FE ++ +N W +ML +Q+ + E F ++ G + N TF VL
Sbjct: 177 SEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN-QSNQYTFPSVLT 235
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
AC+ G + K G + + ++D+ + +++ A ++E M ++
Sbjct: 236 ACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVV 294
Query: 396 SVWGALLTGCRIHG 409
S W +++ GC G
Sbjct: 295 S-WNSMIVGCVRQG 307
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 267/485 (55%), Gaps = 8/485 (1%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G Q+H IK GL LS+ L+ YSK + N + ++F+SS R++ TWS++++ ++Q
Sbjct: 240 GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ 299
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
N A+ F +M G+ P ++ + +C+ + + G LH+ LK + +F
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
++LVDMYAK G + AR FD + R+V W+ +I GYVQ ++EEAL L++++ +
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM---KT 416
Query: 221 VGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
G+ ND T++SVL+ C + LELGKQ+HG K F + S+L ++YSKCG++E
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLED 476
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
F +++ WNAM+ + + + ELFE+M + G++P+ +TF+ ++ ACS
Sbjct: 477 GNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA-EGMEPDDVTFVNIISACS 535
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
H G VE+G YF +M G++P HYA MVDLL RAG+L++A + IE ++ +W
Sbjct: 536 HKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLW 595
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
LL+ C+ HG EL Y +++ G S V LS K +R
Sbjct: 596 RILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRAN 655
Query: 459 GIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVA--DTSFVLK 516
G+ KE G SW+E N+ H F GD H E + + + +M + G+V D+SFV +
Sbjct: 656 GVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEE 715
Query: 517 EVGGE 521
E G +
Sbjct: 716 EEGTQ 720
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 210/404 (51%), Gaps = 10/404 (2%)
Query: 29 LLALTH---SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPH 85
L LTH R+L G +H II+TG T ++ L+NFY+K + +FN+
Sbjct: 18 LKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIIC 77
Query: 86 RSATTWSSLISSFAQN---DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
+ +W+SLI+ ++QN + + FR+M +LP+ + L K+ ++L S VG
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
HAL +K + D++V +SLV MY K G + VF MP RN +WS M+ GY
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 203 GEDEEALRLFKQVLVEEDVGVN-DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
G EEA+++F L E++ G + D+ ++VL A+ + LG+QIH K
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
++++L+++YSKC ++ A + F+ RN W+AM+ +Q+ + +LF +M S
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS-A 316
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
G+KP+ T + VL ACS +E+G+ + K G E +VD+ +AG L D
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLAD 375
Query: 382 AVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
A + + + E ++W +L++G + D E A + R+ G
Sbjct: 376 ARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRMKTAG 418
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 150/305 (49%), Gaps = 13/305 (4%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
TI L A + L G QLH+ ++K G E + L++ Y+K + + F+
Sbjct: 324 TIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCL 383
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R W+SLIS + QN AL +R+M G++P+D + + K+C++L+++ +G
Sbjct: 384 QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H +K + L+V + S+L MY+KCG + VF P+++VVSW+ MI G G
Sbjct: 444 QVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNG 503
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF------KTSFD 257
+ +EAL LF+++L E + +D T +++ C +E GW + + D
Sbjct: 504 QGDEALELFEEMLA-EGMEPDDVTFVNIISACSHKGFVE-----RGWFYFNMMSDQIGLD 557
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQV-RNLGMWNAMLIACAQHAHTNRTFELFEQ 316
+ ++ L S+ G ++ A + E + L +W +L AC H E+
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEK 617
Query: 317 MKSVG 321
+ ++G
Sbjct: 618 LMALG 622
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 1/163 (0%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ + L A + +L G Q+H H IK G + L YSK VF
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+P++ +W+++IS + N AL+ F +ML G+ PDD +C+ +
Sbjct: 482 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Query: 141 VG-LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
G + ++ + V + +VD+ ++ G++ A+ +
Sbjct: 542 RGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 179/611 (29%), Positives = 309/611 (50%), Gaps = 37/611 (6%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQ------------ 71
T+ L + T S L RG +LH I+ GL +++ LI FYSK
Sbjct: 287 TLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM 346
Query: 72 -------------------LPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFR 112
+ +S++++F + ++ T+++L++ F +N AL F
Sbjct: 347 MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFT 406
Query: 113 QMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCG 172
ML+ G+ D L +A +C +S V +H +K + + ++L+DM +C
Sbjct: 407 DMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 173 EIGYARNVFDEMPHR--NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSS 230
+ A +FD+ P + + + +I GY + G ++A+ LF + L E+ + +++ +L+
Sbjct: 467 RMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTL 526
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRN 290
+L VCG E+G QIH + K + S + +SLIS+Y+KC + A + F ++ +
Sbjct: 527 ILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHD 586
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC--SHAGLVEKGQH 348
+ WN+++ + + L+ +M +KP+ IT V+ A + + + +
Sbjct: 587 VISWNSLISCYILQRNGDEALALWSRMNE-KEIKPDIITLTLVISAFRYTESNKLSSCRD 645
Query: 349 YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIH 408
F MK Y IEP ++HY V +LG G L++A I MP++P SV ALL CRIH
Sbjct: 646 LFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIH 705
Query: 409 GDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSW 468
+T +A VA + + +L SN + +R++G +K SW
Sbjct: 706 SNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSW 765
Query: 469 VEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIR 528
+ N++H+F A D SH + +IY LE L E K GY +T +VL+EV K +
Sbjct: 766 IIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLF 825
Query: 529 YHSERLAIAFGLITF-PQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRF 587
+HS +LA+ +G+++ + +P+RVMKN+ +CGDCH K+IS + R +++RD++ FH F
Sbjct: 826 HHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHF 885
Query: 588 EDGKCTCGDYW 598
+GKC+C D W
Sbjct: 886 VNGKCSCRDLW 896
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 182/389 (46%), Gaps = 53/389 (13%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+HA +K E L + LI+ Y K P ++ VF S + ++++LIS F++ +L
Sbjct: 102 VHASFLKLREEKTRL-GNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNL 160
Query: 104 PHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
AL F +M + GL+ P+++ +C +S +G+ +H L +K+ + VFV++
Sbjct: 161 EIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSN 220
Query: 163 SLVDMYAK-----CGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
SL+ +Y K C ++ +FDE+P R+V SW+ ++ V+ G+ +A LF ++
Sbjct: 221 SLMSLYDKDSGSSCDDV---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR 277
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK----- 272
E GV+ FTLS++L C S++L G+++HG + V ++LI YSK
Sbjct: 278 VEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMK 337
Query: 273 --------------------------CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAH 306
G V+ A + F + +N +NA++ ++ H
Sbjct: 338 KVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH 397
Query: 307 TNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ-----HYFELMKKDYGIEP 361
+ +LF M G +F + + AC GLV + + H F +K P
Sbjct: 398 GLKALKLFTDMLQRGVELTDF-SLTSAVDAC---GLVSEKKVSEQIHGF-CIKFGTAFNP 452
Query: 362 GSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
Q ++D+ R ++ DA ++ ++ P
Sbjct: 453 CIQ--TALLDMCTRCERMADAEEMFDQWP 479
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 190/418 (45%), Gaps = 53/418 (12%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLP--NSSLQVFNSSPHRSATTWSSLISSF 98
G+Q+H I+K+G +S+ L++ Y K + L++F+ P R +W++++SS
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 99 AQNDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ H A D F +M R+ G D L T SC S + G LH A++ +
Sbjct: 260 VKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQE 319
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV-- 215
+ V ++L+ Y+K ++ ++++ M ++ V+++ MI Y+ G + A+ +F V
Sbjct: 320 LSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Query: 216 ----------------------------LVEEDVGVNDFTLSSVLRVCGASTLLELGKQI 247
+++ V + DF+L+S + CG + ++ +QI
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQI 439
Query: 248 HGWCFK--TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNA---MLIACA 302
HG+C K T+F+ + ++L+ + ++C + A + F++ NL A ++ A
Sbjct: 440 HGFCIKFGTAFNPC--IQTALLDMCTRCERMADAEEMFDQWP-SNLDSSKATTSIIGGYA 496
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG-QHYFELMKKDY--GI 359
++ ++ LF + + + ++ +L C G E G Q + +K Y I
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRI---HGDTELA 414
G+ +++ + + DA+++ M S W +L++ C I +GD LA
Sbjct: 557 SLGN----SLISMYAKCCDSDDAIKIFNTMREHDVIS-WNSLIS-CYILQRNGDEALA 608
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 249/460 (54%), Gaps = 13/460 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
+Y T L A + R ++ G +H ++KTG E +S L++ Y N L+VF
Sbjct: 106 DYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVF 165
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
P + W SLIS F N+ A++ FR+M G+ ++ I+ +C I
Sbjct: 166 EDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIV 225
Query: 141 VGLSLHALA--------LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSW 192
G H ++ +V +A+SL+DMYAKCG++ AR +FD MP R +VSW
Sbjct: 226 TGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSW 285
Query: 193 SGMIYGYVQLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGW 250
+ +I GY Q G+ EEAL +F +L D+G+ + T SV+R +LG+ IH +
Sbjct: 286 NSIITGYSQNGDAEEALCMFLDML---DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY 342
Query: 251 CFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRT 310
KT F + +L+++Y+K G E A +AFE+L+ ++ W ++I A H H N
Sbjct: 343 VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEA 402
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
+F++M+ G P+ IT+L VLYACSH GLVE+GQ YF M+ +G+EP +HY MV
Sbjct: 403 LSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMV 462
Query: 371 DLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSG 430
D+L RAG+ ++A ++++ MP++P ++WGALL GC IH + EL + V E + SG
Sbjct: 463 DILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSG 522
Query: 431 LNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
+ VLLSN + ++ + + K G S VE
Sbjct: 523 IYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 201/413 (48%), Gaps = 19/413 (4%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGL--ETIPLLSHHLINFYS---KTQLPNSSLQVFNSS 83
L L + RSL QLH +IK+ + IPL LI+F + +T + + VF S
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPL--SRLIDFCTTCPETMNLSYARSVFESI 67
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
S W+S+I ++ + P AL F+++MLR G PD P K+C+ L I G
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H +KT + ++++V++ L+ MY CGE+ Y VF+++P NVV+W +I G+V
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS----- 258
+A+ F++ + V N+ + +L CG + GK HG+ FD
Sbjct: 188 RFSDAIEAFRE-MQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 259 ---SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
+ +A+SLI +Y+KCG + A F+ + R L WN+++ +Q+ +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGR 375
M + G+ P+ +TFL V+ A G + GQ + K G + +V++ +
Sbjct: 307 DMLDL-GIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAK 364
Query: 376 AGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVS 428
G + A + E++ + T + W ++ G HG A + R+ E+G+ +
Sbjct: 365 TGDAESAKKAFEDLEKKDTIA-WTVVIIGLASHGHGNEALSIFQRMQEKGNAT 416
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 301/576 (52%), Gaps = 24/576 (4%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQ---VFNSSPHRSATTWSSLISS 97
G Q+H +K GL +++ +I+ Y + ++ + VF + ++ TW+S+I++
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI------HVGLSLHALALK 151
F +L A+ F +M G+ D L S S + L LH+L +K
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVK 295
Query: 152 TAYHLDVFVASSLVDMYAKCGE-IGYARNVFDEMPH-RNVVSWSGMIYGYVQLGEDEEAL 209
+ VA++L+ +Y++ E +F EM H R++V+W+G+I + + + E A+
Sbjct: 296 SGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYDPERAI 354
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
LF Q L +E + + +T SSVL+ C IH K F + + +SLI
Sbjct: 355 HLFGQ-LRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHA 413
Query: 270 YSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
Y+KCG+++ + F+++ R++ WN+ML A + H + +F++M + P+ T
Sbjct: 414 YAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD----INPDSAT 469
Query: 330 FLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
F+ +L ACSHAG VE+G F M + P HYA ++D+L RA + +A +VI++M
Sbjct: 470 FIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM 529
Query: 390 PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN-VLLSNXXXXXXXXXXX 448
PM+P VW ALL CR HG+T L AD++ E ++ ++ + +SN
Sbjct: 530 PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEA 589
Query: 449 XXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYV 508
K + ++KE LSW E GN+VH FA+G R +Y +L+ L + + GYV
Sbjct: 590 NLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYV 649
Query: 509 ADT-SFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERP-----IRVMKNLRVCGDCH 562
+ S E++ + +HSE+LA+AF ++ + I++MKN R+C DCH
Sbjct: 650 PEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCH 709
Query: 563 TAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
+K SK+ G+ +++RD+NRFH F+D C+C DYW
Sbjct: 710 NFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 119/215 (55%), Gaps = 13/215 (6%)
Query: 131 KSCAALSSIHVGLSLH--ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRN 188
++CA ++ G++LH L+ Y +V +A+ L++MYAKCG I YAR VFD MP RN
Sbjct: 67 QACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERN 126
Query: 189 VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIH 248
VVSW+ +I GYVQ G ++E LF +L N+FTLSSVL C E GKQ+H
Sbjct: 127 VVSWTALITGYVQAGNEQEGFCLFSSML--SHCFPNEFTLSSVLTSCR----YEPGKQVH 180
Query: 249 GWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA---FEELQVRNLGMWNAMLIACAQHA 305
G K S +VA+++IS+Y +C AY+A FE ++ +NL WN+M+ A
Sbjct: 181 GLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCN 240
Query: 306 HTNRTFELFEQMKS--VGGVKPNFITFLCVLYACS 338
+ +F +M S VG + + LY S
Sbjct: 241 LGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSS 275
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 189/400 (47%), Gaps = 33/400 (8%)
Query: 31 ALTHSRSLRRGLQLHAHIIK--TGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
A R+L G+ LH H++ +L++ LIN Y+K + QVF++ P R+
Sbjct: 68 ACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNV 127
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+W++LI+ + Q F ML P++ L + SC G +H L
Sbjct: 128 VSWTALITGYVQAGNEQEGFCLFSSMLS-HCFPNEFTLSSVLTSC----RYEPGKQVHGL 182
Query: 149 ALKTAYHLDVFVASSLVDMYAKC--GEIGY-ARNVFDEMPHRNVVSWSGMIYGYVQLGED 205
ALK H ++VA++++ MY +C G Y A VF+ + +N+V+W+ MI +
Sbjct: 183 ALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLG 242
Query: 206 EEALRLFKQVLVEEDVGVNDFTLSSVLRVCG----ASTLL--ELGK---QIHGWCFKTSF 256
++A+ +F + + + VG F +++L +C +S L+ E+ K Q+H K+
Sbjct: 243 KKAIGVFMR-MHSDGVG---FDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGL 298
Query: 257 DSSCFVASSLISLYSK-CGAVEGAYQAFEEL-QVRNLGMWNAMLIACAQHAHTNRTFELF 314
+ VA++LI +YS+ Y+ F E+ R++ WN ++ A A + R LF
Sbjct: 299 VTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLF 357
Query: 315 EQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKK--DYGIEPGSQHYATMVDL 372
Q++ + P++ TF VL AC AGLV +H + + G + +++
Sbjct: 358 GQLRQ-EKLSPDWYTFSSVLKAC--AGLV-TARHALSIHAQVIKGGFLADTVLNNSLIHA 413
Query: 373 LGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTE 412
+ G L ++V ++M S W ++L +HG +
Sbjct: 414 YAKCGSLDLCMRVFDDMDSRDVVS-WNSMLKAYSLHGQVD 452
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 264/484 (54%), Gaps = 3/484 (0%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+HA I +G + + + LI Y K S VF+ HR+ T +++IS +N+L
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
L F M R + P+ +A +C+ I G +HAL K ++ + S+
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+DMY+KCG I A +F+ + VS + ++ G Q G +EEA++ F ++L + V +
Sbjct: 297 LMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML-QAGVEI 355
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
+ +S+VL V L LGKQ+H K F + FV + LI++YSKCG + + F
Sbjct: 356 DANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVF 415
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
+ RN WN+M+ A A+H H +L+E+M ++ VKP +TFL +L+ACSH GL+
Sbjct: 416 RRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACSHVGLI 474
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
+KG+ MK+ +GIEP ++HY ++D+LGRAG L++A I+ +P++P +W ALL
Sbjct: 475 DKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG 534
Query: 404 GCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKE 463
C HGDTE+ Y A+++F+ SS ++L++N K ++ G+ KE
Sbjct: 535 ACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKE 594
Query: 464 TGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEK 523
TG+S +E ++ H+F D+ H + IY+ L L M GY D F+L G+++
Sbjct: 595 TGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYT-GDDR 653
Query: 524 NQTI 527
N T+
Sbjct: 654 NGTV 657
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 148/295 (50%), Gaps = 15/295 (5%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + L A + S+ + G Q+HA + K G+E+ + L++ YSK + +F
Sbjct: 255 NSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIF 314
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
S+ + + ++ AQN A+ FF +ML+ G+ D +++ +S+
Sbjct: 315 ESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLG 374
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
+G LH+L +K + + FV + L++MY+KCG++ ++ VF MP RN VSW+ MI +
Sbjct: 375 LGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFA 434
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG-------KQIHGWCFK 253
+ G AL+L++++ E V D T S+L C L++ G K++HG +
Sbjct: 435 RHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPR 493
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHT 307
T + +I + + G ++ A + L ++ + +W A+L AC+ H T
Sbjct: 494 TEH------YTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDT 542
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 15/296 (5%)
Query: 140 HVGLSLHALALKTAYHLD----------VFVASSLVDMYAKCGEIGYARNVFDEMPHRNV 189
H+G LHA +K + + V +SL+ +YAKCG++ A +FDEMP R+V
Sbjct: 62 HLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDV 121
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHG 249
+S + + YG+++ E E L K++L G + TL+ VL VC + K IH
Sbjct: 122 ISQNIVFYGFLRNRETESGFVLLKRML--GSGGFDHATLTIVLSVCDTPEFCLVTKMIHA 179
Query: 250 WCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNR 309
+ +D V + LI+ Y KCG F+ + RN+ A++ ++
Sbjct: 180 LAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHED 239
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATM 369
LF M+ G V PN +T+L L ACS + + +GQ L+ K YGIE + +
Sbjct: 240 GLRLFSLMRR-GLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK-YGIESELCIESAL 297
Query: 370 VDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
+D+ + G ++DA + E E E +L G +G E A R+ + G
Sbjct: 298 MDMYSKCGSIEDAWTIFEST-TEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 264/462 (57%), Gaps = 8/462 (1%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA- 99
G Q+HA+ IK L +++ LI+ Y+K + +VF+ ++++I ++
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 100 ---QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
Q +L H AL+ FR M + P + ++ A+L+S+ + +H L K +L
Sbjct: 429 LGTQWEL-HEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
D+F S+L+D+Y+ C + +R VFDEM +++V W+ M GYVQ E+EEAL LF ++
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
+ + ++FT ++++ G ++LG++ H K + + ++ ++L+ +Y+KCG+
Sbjct: 548 LSRERP-DEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
E A++AF+ R++ WN+++ + A H + ++ E+M S G++PN+ITF+ VL A
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS-EGIEPNYITFVGVLSA 665
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
CSHAGLVE G FELM + +GIEP ++HY MV LLGRAG+L A ++IE+MP +P
Sbjct: 666 CSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI 724
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLR 456
VW +LL+GC G+ ELA + A+ SG +LSN + ++
Sbjct: 725 VWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMK 784
Query: 457 DQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
+G+ KE G SW+ VH F + D+SH K +IY L++L
Sbjct: 785 VEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDL 826
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 208/395 (52%), Gaps = 15/395 (3%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G Q+HAHI++ GLE L + LI+ Y K ++ ++FN P+++ +W++L+S
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ QN L A++ F M + GL PD + + SCA+L ++ G +HA +K D
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG---EDEEALRLFKQ 214
+V +SL+DMYAKC + AR VFD +VV ++ MI GY +LG E EAL +F+
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 215 V---LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYS 271
+ L+ + T S+LR + T L L KQIHG FK + F S+LI +YS
Sbjct: 445 MRFRLIRPSL----LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYS 500
Query: 272 KCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFL 331
C ++ + F+E++V++L +WN+M Q + LF +++ + +P+ TF
Sbjct: 501 NCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ-LSRERPDEFTFA 559
Query: 332 CVLYACSHAGLVEKGQHYF-ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
++ A + V+ GQ + +L+K+ G+E ++D+ + G +DA + +
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKR--GLECNPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 391 MEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
W ++++ HG+ + A + +++ +G
Sbjct: 618 SRDV-VCWNSVISSYANHGEGKKALQMLEKMMSEG 651
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 191/376 (50%), Gaps = 7/376 (1%)
Query: 42 LQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQN 101
QL + ++K+G + + LI+FY K + + VF++ P +S TW+++IS +
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
+++L F Q++ ++PD +IL T +C+ L + G +HA L+ +D +
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
+ L+D Y KCG + A +F+ MP++N++SW+ ++ GY Q +EA+ LF + + +
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS-MSKFGL 346
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
+ + SS+L C + L G Q+H + K + + +V +SLI +Y+KC + A +
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 282 AFEELQVRNLGMWNAMLIACAQ---HAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
F+ ++ ++NAM+ ++ + +F M+ ++P+ +TF+ +L A +
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLTFVSLLRASA 465
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
+ + LM K YG+ + ++D+ L+D+ V +EM ++ +W
Sbjct: 466 SLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL-VIW 523
Query: 399 GALLTGCRIHGDTELA 414
++ G + E A
Sbjct: 524 NSMFAGYVQQSENEEA 539
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 174/349 (49%), Gaps = 10/349 (2%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+H II GLE LS+ LIN YS+ + +VF P R+ +WS+++S+ + +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 104 PHLALDFFRQMLRIGL-LPDDHILPTAAKSCAALS--SIHVGLSLHALALKTAYHLDVFV 160
+L F + R P+++IL + ++C+ L + L + +K+ + DV+V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
+ L+D Y K G I YAR VFD +P ++ V+W+ MI G V++G +L+LF Q L+E++
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ-LMEDN 244
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
V + + LS+VL C LE GKQIH + + + + LI Y KCG V A+
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
+ F + +N+ W +L Q+A ELF M G+KP+ +L +C+
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF-GLKPDMYACSSILTSCASL 363
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYAT--MVDLLGRAGKLQDAVQVIE 387
+ G K G+ Y T ++D+ + L DA +V +
Sbjct: 364 HALGFGTQVHAYTIK---ANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 9/270 (3%)
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+H +H + LD ++++ L+++Y++ G + YAR VF++MP RN+VSWS M+
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK----QIHGWCFKT 254
G EE+L +F + N++ LSS ++ C S L G+ Q+ + K+
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKS 177
Query: 255 SFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELF 314
FD +V + LI Y K G ++ A F+ L ++ W M+ C + + + +LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 315 EQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLG 374
Q+ V P+ VL ACS +E G+ + + YG+E + ++D
Sbjct: 238 YQLME-DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYV 295
Query: 375 RAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+ G++ A ++ MP + S W LL+G
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIIS-WTTLLSG 324
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 2/281 (0%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T + L A SL Q+H + K GL LI+ YS S VF+
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
+ W+S+ + + Q AL+ F ++ PD+ + L+S+ +G
Sbjct: 516 KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQ 575
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
H LK + ++ ++L+DMYAKCG A FD R+VV W+ +I Y G
Sbjct: 576 EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHG 635
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
E ++AL++ ++ ++ E + N T VL C + L+E G + + +
Sbjct: 636 EGKKALQMLEK-MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHY 694
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGM-WNAMLIACAQ 303
++SL + G + A + E++ + + W ++L CA+
Sbjct: 695 VCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 228 LSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ 287
+ +L++ + LL +HG + ++++ LI+LYS+ G + A + FE++
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 288 VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ 347
RNL W+ M+ AC H + +F + PN + ACS GL +G+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 348 -HYFELMK--KDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
F+L G + ++D + G + A V + +P E + W +++G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISG 223
Query: 405 CRIHGDTELASYVADRVFEQ 424
C G SYV+ ++F Q
Sbjct: 224 CVKMG----RSYVSLQLFYQ 239
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 247/468 (52%), Gaps = 7/468 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
+ +G+ +H + K G+E ++ L++ Y+K ++++F+ P ++ T++++IS
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 98 FAQND-----LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
F Q D A F M R GL P K+C+A ++ G +HAL K
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
+ D F+ S+L+++YA G F +++ SW+ MI +VQ + E A LF
Sbjct: 388 NFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLF 447
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
+Q L + ++T+S ++ C L G+QI G+ K+ D+ V +S IS+Y+K
Sbjct: 448 RQ-LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAK 506
Query: 273 CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLC 332
G + A Q F E+Q ++ ++AM+ + AQH N +FE MK+ G+KPN FL
Sbjct: 507 SGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKT-HGIKPNQQAFLG 565
Query: 333 VLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
VL AC H GLV +G YF+ MK DY I P +H+ +VDLLGR G+L DA +I +
Sbjct: 566 VLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQ 625
Query: 393 PTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXX 452
W ALL+ CR++ D+ + VA+R+ E +SG VLL N
Sbjct: 626 DHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVR 685
Query: 453 KMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGD 500
+++RD+G+KKE LSW+ GN+ H+FA D SH + IY LE + +
Sbjct: 686 ELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMDN 733
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 193/401 (48%), Gaps = 13/401 (3%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
S S+ G H H+IK+ L L ++L+N Y K + + Q+F+ P R+ +++SL
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 119
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
IS + Q A++ F + L D A C + +G LH L +
Sbjct: 120 ISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGL 179
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
VF+ + L+DMY+KCG++ A ++FD R+ VSW+ +I GYV++G EE L L +
Sbjct: 180 SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAK 239
Query: 215 VLVEEDVGVNDFTLSSVLRVCGAST---LLELGKQIHGWCFKTSFDSSCFVASSLISLYS 271
+ + + + + L SVL+ C + +E G IH + K + V ++L+ +Y+
Sbjct: 240 -MHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYA 298
Query: 272 KCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAH-----TNRTFELFEQMKSVGGVKPN 326
K G+++ A + F + +N+ +NAM+ Q ++ F+LF M+ G++P+
Sbjct: 299 KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR-RGLEPS 357
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
TF VL ACS A +E G+ L+ K+ + + +++L G +D +Q
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKN-NFQSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 387 EEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
+ S W +++ C + + +++ R H+
Sbjct: 417 ASTSKQDIAS-WTSMID-CHVQNEQLESAFDLFRQLFSSHI 455
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 157/304 (51%), Gaps = 16/304 (5%)
Query: 125 ILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEM 184
+ TAAKS S+ +G H +K++ + +++ ++L++MY KC E+G+AR +FD M
Sbjct: 53 LFQTAAKS----GSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRM 108
Query: 185 PHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG 244
P RN++S++ +I GY Q+G E+A+ LF + E ++ ++ FT + L CG L+LG
Sbjct: 109 PERNIISFNSLISGYTQMGFYEQAMELFLEAR-EANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 245 KQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH 304
+ +HG F+ + LI +YSKCG ++ A F+ R+ WN+++ +
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 305 AHTNRTFELFEQMKSVGGVKPNFITFL--CVLYACS---HAGLVEKGQHYFELMKKDYGI 359
L +M G N T+ VL AC + G +EKG K G+
Sbjct: 228 GAAEEPLNLLAKMHRDG---LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK-LGM 283
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG-CRIHGDTELASYVA 418
E ++D+ + G L++A+++ MP + + + A+++G ++ T+ AS A
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVT-YNAMISGFLQMDEITDEASSEA 342
Query: 419 DRVF 422
++F
Sbjct: 343 FKLF 346
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A + +++L G Q+HA I K ++ + LI Y+ +Q F S+ +
Sbjct: 365 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI 424
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+W+S+I QN+ A D FRQ+ + P+++ + +CA +++ G +
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGY 484
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
A+K+ V +S + MYAK G + A VF E+ + +V ++S MI Q G EA
Sbjct: 485 AIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 209 LRLFKQV 215
L +F+ +
Sbjct: 545 LNIFESM 551
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 258/485 (53%), Gaps = 1/485 (0%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T + L +++ +L Q+H +I++ + L+ LI+ Y K + + + +F+
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
++++IS + N L +L+ FR ++++ + P++ L + L ++ +G
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
LH +K + + +++DMYAKCG + A +F+ + R++VSW+ MI Q
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
A+ +F+Q+ V + + ++S+ L C GK IHG+ K S S +
Sbjct: 522 NPSAAIDIFRQMGVS-GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
S+LI +Y+KCG ++ A F+ ++ +N+ WN+++ AC H + LF +M G+
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
+P+ ITFL ++ +C H G V++G +F M +DYGI+P +HYA +VDL GRAG+L +A
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXX 443
+ ++ MP P VWG LL CR+H + ELA + ++ + +SG VL+SN
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAR 760
Query: 444 XXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMA 503
+++++ ++K G SW+E R H F +GD +H ++ IY+ L L E+
Sbjct: 761 EWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Query: 504 KAGYV 508
GY+
Sbjct: 821 LEGYI 825
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 197/369 (53%), Gaps = 4/369 (1%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G+QLH ++ +G++ + + L++ YSK + + ++F TW+ +IS + Q
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
+ L +L FF +M+ G+LPD + S + ++ +H ++ + LD+F+
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
S+L+D Y KC + A+N+F + +VV ++ MI GY+ G ++L +F+ LV+
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRW-LVKVK 436
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+ N+ TL S+L V G L+LG+++HG+ K FD+ C + ++I +Y+KCG + AY
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY 496
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
+ FE L R++ WN+M+ CAQ + + ++F QM V G+ + ++ L AC++
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM-GVSGICYDCVSISAALSACANL 555
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
G+ M K + + +T++D+ + G L+ A+ V + M + S W +
Sbjct: 556 PSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNS 613
Query: 401 LLTGCRIHG 409
++ C HG
Sbjct: 614 IIAACGNHG 622
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 149/312 (47%), Gaps = 4/312 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR-- 86
L A ++ LR+G Q+HA +I + ++ Y+ + ++F R
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
S W+S+ISSF +N L + AL F+ +ML G+ PD P K+C AL + L
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
+ FVASSL+ Y + G+I +FD + ++ V W+ M+ GY + G +
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
++ F V+ + + N T VL VC + L++LG Q+HG + D + +SL
Sbjct: 222 SVIKGF-SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+S+YSKCG + A + F + + WN M+ Q + F +M S GV P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS-SGVLPD 339
Query: 327 FITFLCVLYACS 338
ITF +L + S
Sbjct: 340 AITFSSLLPSVS 351
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 12/279 (4%)
Query: 131 KSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR--N 188
++C+ + + G +HA + + D + ++ MYA CG +F + R +
Sbjct: 43 QACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSS 102
Query: 189 VVSWSGMIYGYVQLGEDEEALRLFKQVL---VEEDVGVNDFTLSSVLRVCGASTLLELGK 245
+ W+ +I +V+ G +AL + ++L V DV T +++ C A +
Sbjct: 103 IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS----TFPCLVKACVALKNFKGID 158
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHA 305
+ D + FVASSLI Y + G ++ + F+ + ++ +WN ML A+
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQH 365
+ + F M+ + + PN +TF CVL C+ L++ G L+ G++
Sbjct: 219 ALDSVIKGFSVMR-MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS-GVDFEGSI 276
Query: 366 YATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+++ + + G+ DA ++ M T + W +++G
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVT-WNCMISG 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 228 LSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ 287
LS +L+ C LL GKQ+H + S + ++ +Y+ CG+ + F L
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 288 VR--NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEK 345
+R ++ WN+++ + ++ N+ + +M GV P+ TF C++ AC A K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCF-GVSPDVSTFPCLVKACV-ALKNFK 155
Query: 346 GQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
G + G++ ++++ GK+ ++ + + ++ +W +L G
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNG 213
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 264/511 (51%), Gaps = 28/511 (5%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
+ L GLQ++ IK+ L +++ I+ Y K Q + +VF+ R A +W+++I
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAII 455
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
++ QN + L F MLR + PD+ + K+C S+ G+ +H+ +K+
Sbjct: 456 AAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMA 514
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NV-------------------VSWSGM 195
+ V SL+DMY+KCG I A + R NV VSW+ +
Sbjct: 515 SNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSI 574
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
I GYV + E+A LF +++ E + + FT ++VL C LGKQIH K
Sbjct: 575 ISGYVMKEQSEDAQMLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE 633
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
S ++ S+L+ +YSKCG + + FE+ R+ WNAM+ A H +LFE
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFE 693
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGR 375
+M + +KPN +TF+ +L AC+H GL++KG YF +MK+DYG++P HY+ MVD+LG+
Sbjct: 694 RM-ILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGK 752
Query: 376 AGKLQDAVQVIEEMPMEPTESVWGALLTGCRIH-GDTELASYVADRVFEQGHVSSGLNVL 434
+GK++ A+++I EMP E + +W LL C IH + E+A + S L
Sbjct: 753 SGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTL 812
Query: 435 LSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNK 494
LSN + +R +KKE G SWVE + +H F GD++H + EIY
Sbjct: 813 LSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIY-- 870
Query: 495 LEELGDEMAKAGYVADTSFVLKEVGGEEKNQ 525
EELG ++ D+SFV + V EE++Q
Sbjct: 871 -EELGLIYSEMKPFDDSSFV-RGVEVEEEDQ 899
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 209/404 (51%), Gaps = 23/404 (5%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G+Q+H +++ G +T + + L++ Y+K + SL+VF P +++ +WS++I+ Q
Sbjct: 199 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 258
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
N+L LAL FF++M ++ I + +SCAALS + +G LHA ALK+ + D V
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
++ +DMYAKC + A+ +FD + N S++ MI GY Q +AL LF + L+
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR-LMSSG 377
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+G ++ +LS V R C L G QI+G K+S VA++ I +Y KC A+ A+
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
+ F+E++ R+ WNA++ A Q+ T LF M ++P+ TF +L AC+
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSILKACTGG 496
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM--------PME 392
L + + ++K G+ S +++D+ + G +++A ++ ME
Sbjct: 497 SLGYGMEIHSSIVKS--GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTME 554
Query: 393 PTESV-----------WGALLTGCRIHGDTELASYVADRVFEQG 425
E + W ++++G + +E A + R+ E G
Sbjct: 555 ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 598
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 209/421 (49%), Gaps = 30/421 (7%)
Query: 22 YRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFN 81
Y ++ AL+ LR G QLHAH +K+ ++ ++ Y+K + +F+
Sbjct: 284 YASVLRSCAALSE---LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 82 SSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHV 141
+S + + +++++I+ ++Q + AL F +++ GL D+ L ++CA + +
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
GL ++ LA+K++ LDV VA++ +DMY KC + A VFDEM R+ VSW+ +I + Q
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
G+ E L LF +L + ++FT S+L+ C + L G +IH K+ S+
Sbjct: 461 NGKGYETLFLFVSML-RSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSS 518
Query: 262 VASSLISLYSKCGAVE----------------GAYQAFEELQVRNLG----MWNAMLIAC 301
V SLI +YSKCG +E G + E++ + L WN+++
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 302 AQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG-QHYFELMKKDYGIE 360
+ LF +M + G+ P+ T+ VL C++ G Q + +++KK+ ++
Sbjct: 579 VMKEQSEDAQMLFTRMMEM-GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQ 635
Query: 361 PGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADR 420
+T+VD+ + G L D+ +++ E + W A++ G HG E A + +R
Sbjct: 636 SDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 694
Query: 421 V 421
+
Sbjct: 695 M 695
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 185/400 (46%), Gaps = 37/400 (9%)
Query: 37 SLRRGLQLHAHIIKTGL---------------------------ETIPLLS----HHLIN 65
+L G Q HAH+I +G + +PL + +IN
Sbjct: 63 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 122
Query: 66 FYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHI 125
YSK+ + FN P R +W+S++S + QN +++ F M R G+ D
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 126 LPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
K C+ L +G+ +H + ++ DV AS+L+DMYAK + VF +P
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP 242
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
+N VSWS +I G VQ AL+ FK+ + + + GV+ +SVLR C A + L LG
Sbjct: 243 EKNSVSWSAIIAGCVQNNLLSLALKFFKE-MQKVNAGVSQSIYASVLRSCAALSELRLGG 301
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHA 305
Q+H K+ F + V ++ + +Y+KC ++ A F+ + N +NAM+ +Q
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 361
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA-GLVEKGQHYFELMKKDYGIEPGSQ 364
H + LF ++ S G+ + I+ V AC+ GL E Q Y +K ++
Sbjct: 362 HGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA 420
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+ A +D+ G+ L +A +V +EM S W A++
Sbjct: 421 NAA--IDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAA 457
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 136/308 (44%), Gaps = 41/308 (13%)
Query: 131 KSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVV 190
K CA ++ +G HA + + + FV + L+ +Y + A VFD+MP R+VV
Sbjct: 56 KECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVV 115
Query: 191 SWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF------------------------ 226
SW+ MI GY + + +A F + V + V N
Sbjct: 116 SWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 175
Query: 227 ------TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
T + +L+VC LG QIHG + D+ AS+L+ +Y+K +
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 235
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV-GGVKPNFITFLCVLYACSH 339
+ F+ + +N W+A++ C Q+ + + F++M+ V GV + + VL +C
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI--YASVLRSC-- 291
Query: 340 AGLVE---KGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
A L E GQ + +K D+ + G AT+ D+ + +QDA Q++ +
Sbjct: 292 AALSELRLGGQLHAHALKSDFAAD-GIVRTATL-DMYAKCDNMQDA-QILFDNSENLNRQ 348
Query: 397 VWGALLTG 404
+ A++TG
Sbjct: 349 SYNAMITG 356
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 242/475 (50%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + A T + R G +H +I+ G L + L+N Y+K++ ++ +F
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
+ +WS++I+ + QN AL F M+ G P+ + ++CAA + G
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
H LA++ +V V+++LVDMY KC A VF +P ++VVSW +I G+ G
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
++ F +L+E + + + VL C LE K H + K FDS+ F+
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
+SL+ LYS+CG++ A + F + +++ +W +++ H + E F M V
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 464
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
KPN +TFL +L ACSHAGL+ +G F+LM DY + P +HYA +VDLLGR G L A+
Sbjct: 465 KPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAI 524
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXX 443
++ + MP PT + G LL CRIH + E+A VA ++FE +G +L+SN
Sbjct: 525 EITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKG 584
Query: 444 XXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
++ +GIKK S +E +VH F A D H + +Y L+EL
Sbjct: 585 EWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 192/376 (51%), Gaps = 5/376 (1%)
Query: 36 RSLRRGLQLHAHIIK-TGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
R + G +H + K L + + LI Y K +L++F+ TWSS+
Sbjct: 74 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSM 133
Query: 95 ISSFAQNDLPHLALDFFRQMLRIG-LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
+S F +N P+ A++FFR+M+ + PD L T +C LS+ +G +H ++
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG 193
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
+ D+ + +SL++ YAK A N+F + ++V+SWS +I YVQ G EAL +F
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFN 253
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
++++ N T+ VL+ C A+ LE G++ H + ++ V+++L+ +Y KC
Sbjct: 254 D-MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
+ E AY F + +++ W A++ + +R+ E F M +P+ I + V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
L +CS G +E+ + + + K YG + A++V+L R G L +A +V + ++
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 394 TESVWGALLTGCRIHG 409
T VW +L+TG IHG
Sbjct: 432 T-VVWTSLITGYGIHG 446
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 168/333 (50%), Gaps = 4/333 (1%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
Q+F RS W++L+ S ++ L F M R PD+ LP A K+C L
Sbjct: 15 QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74
Query: 138 SIHVGLSLHALALK-TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMI 196
++ G +H K D++V SSL+ MY KCG + A +FDE+ ++V+WS M+
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134
Query: 197 YGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF 256
G+ + G +A+ F+++++ DV + TL +++ C + LG+ +HG+ + F
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQ 316
+ + +SL++ Y+K A + A F+ + +++ W+ ++ Q+ +F
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
M G +PN T LCVL AC+ A +E+G+ EL + G+E + +VD+ +
Sbjct: 255 MMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKC 312
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
++A V +P + S W AL++G ++G
Sbjct: 313 FSPEEAYAVFSRIPRKDVVS-WVALISGFTLNG 344
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ L A + L +G + H I+ GLET +S L++ Y K P + VF
Sbjct: 263 NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 322
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQM-LRIGLLPDDHILPTAAKSCAALSSI 139
+ P + +W +LIS F N + H +++ F M L PD ++ SC+ L +
Sbjct: 323 SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFL 382
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
H+ +K + + F+ +SLV++Y++CG +G A VF+ + ++ V W+ +I GY
Sbjct: 383 EQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGY 442
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQI 247
G+ +AL F ++ +V N+ T S+L C + L+ G +I
Sbjct: 443 GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 244/455 (53%), Gaps = 14/455 (3%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ + + A + +R G H +I G E +S L Y + P + +VF
Sbjct: 162 NEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVF 221
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLR-IGLLPDDHILPTAAKSCAALSSI 139
+ P W++++S+F++NDL AL F M R GL+PD T +C L +
Sbjct: 222 DEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRL 281
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
G +H + +V V SSL+DMY KCG + AR VF+ M +N VSWS ++ GY
Sbjct: 282 KQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGY 341
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
Q GE E+A+ +F++ + E+D+ + +VL+ C + LGK+IHG + +
Sbjct: 342 CQNGEHEKAIEIFRE-MEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
V S+LI LY K G ++ A + + ++ +RN+ WNAML A AQ+ F M
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G+KP++I+F+ +L AC H G+V++G++YF LM K YGI+PG++HY+ M+DLLGRAG
Sbjct: 457 -KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 380 QDAVQVIEEMPMEPTESVWGALLTGCRIHGD-TELASYVADRVFE---QGHVSSGLNVLL 435
++A ++E S+WG LL C + D + +A +A R+ E + H+S VLL
Sbjct: 516 EEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSY---VLL 572
Query: 436 SNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
SN K++ +G+ K G SW++
Sbjct: 573 SNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 200/403 (49%), Gaps = 25/403 (6%)
Query: 26 CNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLP-NSSLQVFNSSP 84
CN + + H G+Q HAH++K+GLET + + L++ Y K + +VF+
Sbjct: 71 CNKVFSFIH------GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRF 124
Query: 85 HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS 144
+ A +W+S++S + AL+ F +M+ GL ++ L +A K+C+ L + +G
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
H + + + + F++S+L +Y E AR VFDEMP +V+ W+ ++ + +
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
EEAL LF + + + + T +VL CG L+ GK+IHG S+ V S
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 265 SLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
SL+ +Y KCG+V A Q F + +N W+A+L Q+ + E+F +M+ +
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME-----E 359
Query: 325 PNFITFLCVLYACSHAGLVEKGQ--HYFELMKKDYG---IEPGSQHYATMVDLLGRAGKL 379
+ F VL AC+ V G+ H + + +G +E + ++DL G++G +
Sbjct: 360 KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE------SALIDLYGKSGCI 413
Query: 380 QDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA-SYVADRV 421
A +V +M + + W A+L+ +G E A S+ D V
Sbjct: 414 DSASRVYSKMSIRNMIT-WNAMLSALAQNGRGEEAVSFFNDMV 455
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 4/285 (1%)
Query: 131 KSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGE-IGYARNVFDEMPHRNV 189
++C + S G+ HA +K+ D V +SL+ +Y K G + R VFD ++
Sbjct: 69 QTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDA 128
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHG 249
+SW+ M+ GYV E +AL +F + +V + N+FTLSS ++ C + LG+ HG
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVE-MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHG 187
Query: 250 WCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNR 309
F+ + F++S+L LY A + F+E+ ++ W A+L A +++
Sbjct: 188 VVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEE 247
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATM 369
LF M G+ P+ TF VL AC + +++G+ + + GI +++
Sbjct: 248 ALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSL 306
Query: 370 VDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
+D+ G+ G +++A QV M + + S W ALL G +G+ E A
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVS-WSALLGGYCQNGEHEKA 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 5/204 (2%)
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+LG+ EA+R+ E + +S+L+ C G Q H K+ ++
Sbjct: 38 KLGQLTEAIRILNSTHSSE-IPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR 96
Query: 261 FVASSLISLYSKCG-AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
V +SL+SLY K G + + F+ V++ W +M+ + E+F +M S
Sbjct: 97 NVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS 156
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G+ N T + ACS G V G+ F + +G E +T+ L G +
Sbjct: 157 F-GLDANEFTLSSAVKACSELGEVRLGR-CFHGVVITHGFEWNHFISSTLAYLYGVNREP 214
Query: 380 QDAVQVIEEMPMEPTESVWGALLT 403
DA +V +EMP EP W A+L+
Sbjct: 215 VDARRVFDEMP-EPDVICWTAVLS 237
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 240/464 (51%), Gaps = 4/464 (0%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +HA + K +++ + L+ YSK + VF S + W SLIS +
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 101 NDLPHLALDFFRQMLRI--GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
N AL F M L PD I+ + +CA L ++ GL +H +KT L+V
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
FV SSL+D+Y+KCG A VF M N+V+W+ MI Y + E ++ LF +++
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF-NLMLS 570
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
+ + + +++SVL ++ L GK +HG+ + S + ++LI +Y KCG +
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A F+++Q ++L WN M+ H LF++MK G P+ +TFL ++ AC+
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKK-AGESPDDVTFLSLISACN 689
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
H+G VE+G++ FE MK+DYGIEP +HYA MVDLLGRAG L++A I+ MP+E S+W
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
LL+ R H + EL A+++ V L N +++++
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Query: 459 GIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
G+ K+ G SW+E +R + F +G S EI+N L L M
Sbjct: 810 GLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 194/399 (48%), Gaps = 8/399 (2%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATT 90
A + S + G Q+H ++K GL P + L++ YSK + + VF+ +
Sbjct: 281 ACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI 340
Query: 91 WSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALAL 150
W+++++++A+ND + ALD F M + +LPD L C+ L + G S+HA
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
K + S+L+ +Y+KCG A VF M +++V+W +I G + G+ +EAL+
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 211 LFKQVLVEED-VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
+F + ++D + + ++SV C L G Q+HG KT + FV SSLI L
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDL 520
Query: 270 YSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
YSKCG E A + F + N+ WN+M+ +++ + +LF M S G+ P+ ++
Sbjct: 521 YSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS-QGIFPDSVS 579
Query: 330 FLCVLYACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE 387
VL A S + KG+ H + L GI + ++D+ + G + A + +
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTL---RLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 388 EMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGH 426
+M + W ++ G HGD A + D + + G
Sbjct: 637 KM-QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 147/271 (54%), Gaps = 3/271 (1%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
+LR GLQ+H +IKTGL + LI+ YSK LP +L+VF S + W+S+I
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
S +++N+LP L++D F ML G+ PD + + + ++ +S+ G SLH L+
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP 609
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
D + ++L+DMY KCG YA N+F +M H+++++W+ MIYGY G+ AL LF +
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDE- 668
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT-SFDSSCFVASSLISLYSKCG 274
+ + +D T S++ C S +E GK I + + + + ++++ L + G
Sbjct: 669 MKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAG 728
Query: 275 AVEGAYQAFEELQVR-NLGMWNAMLIACAQH 304
+E AY + + + + +W +L A H
Sbjct: 729 LLEEAYSFIKAMPIEADSSIWLCLLSASRTH 759
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 177/392 (45%), Gaps = 16/392 (4%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T + L A + +L G +H ++ G P ++ L+N Y K + ++QVF+
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 84 PH-------RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAAL 136
R T W+S+I + + + FR+ML G+ PD L
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 137 SSI--HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWS 193
+ G +H L+ + D F+ ++L+DMY K G A VF E+ + NVV W+
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 194 GMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFK 253
MI G+ G E +L L+ + V + + + L C S G+QIH K
Sbjct: 242 VMIVGFGGSGICESSLDLY-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFEL 313
+ +V +SL+S+YSKCG V A F + + L +WNAM+ A A++ + +L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 314 FEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQH-YFELMKKDYGIEPGSQHYATMVDL 372
F M+ V P+ T V+ CS GL G+ + EL K+ I+ S + ++ L
Sbjct: 361 FGFMRQ-KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP--IQSTSTIESALLTL 417
Query: 373 LGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+ G DA V + M E WG+L++G
Sbjct: 418 YSKCGCDPDAYLVFKSME-EKDMVAWGSLISG 448
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 11/218 (5%)
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
I +Q GE +AL L+ + + FT S+L+ C A T L GK IHG
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFE-------ELQVRNLGMWNAMLIACAQHAHTN 308
+ F+A+SL+++Y KCG ++ A Q F+ + R++ +WN+M+ +
Sbjct: 91 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFK 150
Query: 309 RTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV--EKGQHYFELMKKDYGIEPGSQHY 366
F +M V GV+P+ + V+ G E+G+ M ++ ++ S
Sbjct: 151 EGVGCFRRML-VFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLDTDSFLK 208
Query: 367 ATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
++D+ + G DA +V E+ + +W ++ G
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
+I + L+A++ + SL +G LH + ++ G+ + L + LI+ Y K + +F
Sbjct: 579 SITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
H+S TW+ +I + + AL F +M + G PDD + +C + G
Sbjct: 639 QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGK 698
Query: 144 SLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP 185
++ +K Y ++ + +++VD+ + G + A + MP
Sbjct: 699 NIFEF-MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMP 741
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/561 (27%), Positives = 285/561 (50%), Gaps = 16/561 (2%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPN-SSLQVFNSSPHRSATTWSSL 94
RSL G Q+H+ IK G E + + L++ Y K + +VF + + +W++L
Sbjct: 339 RSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTL 398
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
I + +M++ + P+ L ++C+ L + L +HA L+
Sbjct: 399 ILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHV 458
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
++ V +SLVD YA ++ YA NV M R+ ++++ ++ + +LG+ E AL +
Sbjct: 459 DGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVI-N 517
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG 274
+ + + ++ +L + LE GK +H + K+ F + V +SL+ +YSKCG
Sbjct: 518 YMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCG 577
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
++E A + FEE+ ++ WN ++ A + + FE+M+ + +P+ +TFL +L
Sbjct: 578 SLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMR-MKETEPDSVTFLILL 636
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
ACS+ L + G YF++MKK Y IEP +HY +V +LGRAG+L++A V+E M ++P
Sbjct: 637 SACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPN 696
Query: 395 ESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKM 454
++ LL CR G+ L +A++ L +LL++ +
Sbjct: 697 AMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNL 756
Query: 455 LRDQGIKKETGLSWVEEGNRVHTFAAGDRSHA-KTVEIYNKLEELGDEMAKAGYVADTSF 513
+ ++ + K+ G S VE +VH+F + D + KT IY ++E + +E+ + G
Sbjct: 757 MTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG------- 809
Query: 514 VLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITG 573
N+ +HS + A+ +G I E P+ V+KN +C DCH + ++++
Sbjct: 810 -----SPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVD 864
Query: 574 RVLIVRDNNRFHRFEDGKCTC 594
+ + VRD N+ H F++G+C+C
Sbjct: 865 KKITVRDGNQVHIFKNGECSC 885
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 191/393 (48%), Gaps = 10/393 (2%)
Query: 20 GNYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQV 79
GN + C +L+ S S R GL +H +IK GL L ++L++ Y KT ++ ++
Sbjct: 21 GNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKL 80
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F+ HR+ W+ +IS+F ++ AL F +M+ G P++ + +SCA L I
Sbjct: 81 FDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDI 140
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
G +H +KT + + V SSL D+Y+KCG+ A +F + + + +SW+ MI
Sbjct: 141 SYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSL 200
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTL--LELGKQIHGWCFKTSFD 257
V + EAL+ + + +V+ V N+FT +++ GAS+ LE GK IH
Sbjct: 201 VGARKWREALQFYSE-MVKAGVPPNEFTF---VKLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
+ + +SL+ YS+ +E A + +++ +W +++ ++ F +M
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
+S+ G++PN T+ +L CS ++ G+ K G E + +VD+ +
Sbjct: 317 RSL-GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMYMKCS 374
Query: 378 KLQ-DAVQVIEEMPMEPTESVWGALLTGCRIHG 409
+ +A +V M + P W L+ G HG
Sbjct: 375 ASEVEASRVFGAM-VSPNVVSWTTLILGLVDHG 406
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 157/337 (46%), Gaps = 9/337 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ L A + R +RR L++HA++++ ++ ++ + L++ Y+ ++ + + V
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
S R T++SL++ F + +AL M G+ D LP + A L ++
Sbjct: 486 RSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G LH ++K+ + V +SLVDMY+KCG + A+ VF+E+ +VVSW+G++ G
Sbjct: 546 TGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLA 605
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK---QIHGWCFKTSFD 257
G AL F+++ ++E + T +L C L +LG Q+ +
Sbjct: 606 SNGFISSALSAFEEMRMKE-TEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQ 664
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQ 316
+V L+ + + G +E A E + ++ N ++ +L AC + + ++ +
Sbjct: 665 VEHYV--HLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELM 353
++ P L LY +G E Q LM
Sbjct: 723 GLALAPSDPALYILLADLY--DESGKPELAQKTRNLM 757
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 262/483 (54%), Gaps = 6/483 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A TH L +G Q+H +K GL+ LI+ YSK + + +VF+S P S
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+ ++LI+ ++QN+L A+ F++ML G+ P + T ++C S+ +G H
Sbjct: 596 VSMNALIAGYSQNNLEE-AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 149 ALKTAYHLD-VFVASSLVDMYAKCGEIGYARNVFDEMPH-RNVVSWSGMIYGYVQLGEDE 206
K + + ++ SL+ MY + A +F E+ +++V W+GM+ G+ Q G E
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
EAL+ +K+ + + V + T +VLRVC + L G+ IH F + D +++L
Sbjct: 715 EALKFYKE-MRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 267 ISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP 325
I +Y+KCG ++G+ Q F+E++ R N+ WN+++ A++ + ++F+ M+ + P
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMP 832
Query: 326 NFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQV 385
+ ITFL VL ACSHAG V G+ FE+M YGIE H A MVDLLGR G LQ+A
Sbjct: 833 DEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF 892
Query: 386 IEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXX 445
IE ++P +W +LL CRIHGD A+++ E +S VLLSN
Sbjct: 893 IEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCW 952
Query: 446 XXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKA 505
K++RD+G+KK G SW++ R H FAAGD+SH++ +I LE+L D M
Sbjct: 953 EKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDD 1012
Query: 506 GYV 508
V
Sbjct: 1013 AVV 1015
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 193/382 (50%), Gaps = 5/382 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A+ +L GL +HA IK GL + + L++ YSK + ++ +VF +
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
++ W+++I +A N H ++ F M G DD + +CAA + +G
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS 448
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
H++ +K ++FV ++LVDMYAKCG + AR +F+ M R+ V+W+ +I YVQ
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
+ EA LFK++ + V + L+S L+ C L GKQ+H K D
Sbjct: 509 NESEAFDLFKRMNLCGIVS-DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG 567
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
SSLI +YSKCG ++ A + F L ++ NA++ +Q+ + LF++M + GV
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLT-RGV 625
Query: 324 KPNFITFLCVLYACSHAGLVEKG-QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
P+ ITF ++ AC + G Q + ++ K+ + E G +++ + + + +A
Sbjct: 626 NPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE-GEYLGISLLGMYMNSRGMTEA 684
Query: 383 VQVIEEMPMEPTESVWGALLTG 404
+ E+ + +W +++G
Sbjct: 685 CALFSELSSPKSIVLWTGMMSG 706
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 173/342 (50%), Gaps = 4/342 (1%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+IN Y + + +F W+ +IS + +A+++F M + +
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
L + + ++++ +GL +HA A+K +++V SSLV MY+KC ++ A VF+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 183 EMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLE 242
+ +N V W+ MI GY GE + + LF + ++DFT +S+L C AS LE
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMD-MKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 243 LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACA 302
+G Q H K + FV ++L+ +Y+KCGA+E A Q FE + R+ WN ++ +
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPG 362
Q + + F+LF++M ++ G+ + L AC+H + +G+ L K G++
Sbjct: 506 QDENESEAFDLFKRM-NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK-CGLDRD 563
Query: 363 SQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
++++D+ + G ++DA +V +P S+ AL+ G
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM-NALIAG 604
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 11/295 (3%)
Query: 138 SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIY 197
++ +G ++H+ +L + + +++VD+YAKC ++ YA FD + ++V +W+ M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 198 GYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
Y +G+ + LR F L E + N FT S VL C T +E G+QIH K +
Sbjct: 134 MYSSIGKPGKVLRSFVS-LFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
+ + +L+ +Y+KC + A + FE + N W + + +FE+M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
+ G +P+ + F+ V+ G ++ + F M P + M+ G+ G
Sbjct: 253 RDEGH-RPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRG 306
Query: 378 KLQDAVQVIEEM---PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSS 429
A++ M ++ T S G++L+ I + +L V + G S+
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 158/376 (42%), Gaps = 42/376 (11%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
+LR G +H+ + G+++ L + +++ Y+K + + + F+ + T W+S++S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF-LEKDVTAWNSMLS 133
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
++ P L F + + P+ +CA +++ G +H +K
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
+ + +LVDMYAKC I AR VF+ + N V W+ + GYV+ G EEA+ +F+++
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
E G + F T +I+ Y + G +
Sbjct: 254 DE-------------------------GHRPDHLAFVT-----------VINTYIRLGKL 277
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
+ A F E+ ++ WN M+ + E F M+ VK T VL A
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-SSVKSTRSTLGSVLSA 336
Query: 337 CSHAGLVEKG-QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
++ G + E +K G+ +++V + + K++ A +V E + E +
Sbjct: 337 IGIVANLDLGLVVHAEAIK--LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKND 393
Query: 396 SVWGALLTGCRIHGDT 411
W A++ G +G++
Sbjct: 394 VFWNAMIRGYAHNGES 409
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 273/504 (54%), Gaps = 8/504 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLP-NSSLQV 79
N T+ + L + + + L G +H ++K G+E + + ++N Y+ + ++ +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F ++ TW++LI+ F L ++QML + + A ++ A++ S+
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSV 229
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
G +HA +K + ++ V +S++D+Y +CG + A++ F EM +++++W+ +I
Sbjct: 230 TTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI-SE 288
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
++ + EAL +F++ + V N +T +S++ C L G+Q+HG F+ F+ +
Sbjct: 289 LERSDSSEALLMFQRFESQGFVP-NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEEL-QVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
+A++LI +Y+KCG + + + F E+ RNL W +M+I H + ELF++M
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
S G++P+ I F+ VL AC HAGLVEKG YF +M+ +YGI P Y +VDLLGRAGK
Sbjct: 408 S-SGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADR-VFEQGHVSSGLNVLLSN 437
+ +A +++E MP +P ES WGA+L C+ H L S +A R V E G V+LS
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSY 526
Query: 438 XXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEE 497
KM+R G KKE G+SW+ N+V +FA D+ +Y+ L
Sbjct: 527 IYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGL 586
Query: 498 LGDEMAKAGYVADTSFVL--KEVG 519
L +E +AGYV + ++ +EVG
Sbjct: 587 LIEETREAGYVPELDSLVNDQEVG 610
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 187/369 (50%), Gaps = 5/369 (1%)
Query: 58 LLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRI 117
+L+ +LI Y + L + +F+ P R W+++I+ +A ++ A + F +M++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 118 GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCG-EIGY 176
G P++ L + KSC + + G +H + +K ++V +++++MYA C +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 177 ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCG 236
A +F ++ +N V+W+ +I G+ LG+ L+++KQ+L+ E+ V + ++ +R
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLL-ENAEVTPYCITIAVRASA 224
Query: 237 ASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNA 296
+ + GKQIH K F S+ V +S++ LY +CG + A F E++ ++L WN
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 297 MLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKD 356
LI+ + + ++ +F++ +S G V PN TF ++ AC++ + GQ + +
Sbjct: 285 -LISELERSDSSEALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 357 YGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASY 416
G + ++D+ + G + D+ +V E+ W +++ G HG A
Sbjct: 343 -GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 417 VADRVFEQG 425
+ D++ G
Sbjct: 402 LFDKMVSSG 410
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 229/445 (51%), Gaps = 12/445 (2%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +H+ + K GLE ++H LI Y+K + ++F+ R +W+S+IS +++
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
A+D FR+M G PD+ L + +C+ L + G L +A+ L F+
Sbjct: 211 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 270
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF---KQVLV 217
S L+ MY KCG++ AR VF++M ++ V+W+ MI Y Q G+ EA +LF ++ V
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
D G TLS+VL CG+ LELGKQI + S + +VA+ L+ +Y KCG VE
Sbjct: 331 SPDAG----TLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVE 386
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + FE + V+N WNAM+ A A H LF++M V P+ ITF+ VL AC
Sbjct: 387 EALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM----SVPPSDITFIGVLSAC 442
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
HAGLV +G YF M +G+ P +HY ++DLL RAG L +A + +E P +P E +
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIM 502
Query: 398 WGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN-VLLSNXXXXXXXXXXXXXXXKMLR 456
A+L C D + + E + N V+ SN ++R
Sbjct: 503 LAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMR 562
Query: 457 DQGIKKETGLSWVEEGNRVHTFAAG 481
D+G+ K G SW+E + F AG
Sbjct: 563 DRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 181/356 (50%), Gaps = 16/356 (4%)
Query: 66 FYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHI 125
+S T+ PN FN TW ND AL +R+M GL PD
Sbjct: 87 LFSVTEEPNH--YSFNYMIRGLTNTW---------ND-HEAALSLYRRMKFSGLKPDKFT 134
Query: 126 LPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
+CA L I VG S+H+ K DV + SL+ MYAKCG++GYAR +FDE+
Sbjct: 135 YNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEIT 194
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
R+ VSW+ MI GY + G ++A+ LF++ + EE ++ TL S+L C L G+
Sbjct: 195 ERDTVSWNSMISGYSEAGYAKDAMDLFRK-MEEEGFEPDERTLVSMLGACSHLGDLRTGR 253
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHA 305
+ S F+ S LIS+Y KCG ++ A + F ++ ++ W AM+ +Q+
Sbjct: 254 LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNG 313
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQH 365
++ F+LF +M+ GV P+ T VL AC G +E G+ E + ++
Sbjct: 314 KSSEAFKLFFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKQ-IETHASELSLQHNIYV 371
Query: 366 YATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRV 421
+VD+ G+ G++++A++V E MP++ E+ W A++T G + A + DR+
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITAYAHQGHAKEALLLFDRM 426
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 10/283 (3%)
Query: 23 RTICNHLLALTHSRSLRRGLQLHAHII--KTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
RT+ + L A +H LR G L I K GL T L LI+ Y K +S+ +VF
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST--FLGSKLISMYGKCGDLDSARRVF 291
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
N + W+++I+ ++QN A F +M + G+ PD L T +C ++ ++
Sbjct: 292 NQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALE 351
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
+G + A + + +++VA+ LVDMY KCG + A VF+ MP +N +W+ MI Y
Sbjct: 352 LGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYA 411
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG-KQIHGWCFKTSFDSS 259
G +EAL LF ++ V +D T VL C + L+ G + H
Sbjct: 412 HQGHAKEALLLFDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPK 467
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIAC 301
+++I L S+ G ++ A++ E + + M A+L AC
Sbjct: 468 IEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGAC 510
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 268/484 (55%), Gaps = 13/484 (2%)
Query: 28 HLLALTHSRSLRR---GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSP 84
+LLA + +L++ G Q H + K E ++ + L+ YS+ + S VF S
Sbjct: 321 YLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMR 380
Query: 85 HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAA-LSSIHVGL 143
R +W+++IS+F QN L L +M + G D+I TA S A+ L + +G
Sbjct: 381 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF-KIDYITVTALLSAASNLRNKEIGK 439
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDE--MPHRNVVSWSGMIYGYVQ 201
HA ++ + + S L+DMY+K G I ++ +F+ R+ +W+ MI GY Q
Sbjct: 440 QTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQ 498
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
G E+ +F+++L E+++ N T++S+L C ++LGKQ+HG+ + D + F
Sbjct: 499 NGHTEKTFLVFRKML-EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVF 557
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
VAS+L+ +YSK GA++ A F + + RN + M++ QH R LF M+
Sbjct: 558 VASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE-S 616
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
G+KP+ ITF+ VL ACS++GL+++G FE M++ Y I+P S+HY + D+LGR G++ +
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNE 676
Query: 382 AVQVIEEMPMEPT-ESVWGALLTGCRIHGDTELASYVADRV--FEQGHVSSGLNVLLSNX 438
A + ++ + E +WG+LL C++HG+ ELA V++R+ F++G SG VLLSN
Sbjct: 677 AYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNM 736
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
+ +R++G+KKE G S +E V+ F + D+ H + EIY+ ++ L
Sbjct: 737 YAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGL 796
Query: 499 GDEM 502
+M
Sbjct: 797 AKDM 800
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 198/411 (48%), Gaps = 14/411 (3%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFY-SKTQLPNS-----SL 77
T + L A +++L+ G +H H+I+ + ++ + L+N Y S P+
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
+VF++ ++ W++LIS + + A F M+R+ + P + +
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 138 SIHVGLSLHALALKTA--YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGM 195
SI + L LK Y D+FV SS + MYA+ G+I +R VFD RN+ W+ M
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
I YVQ E++ LF + + +++ ++ T A +ELG+Q HG+ K
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
+ + +SL+ +YS+CG+V ++ F ++ R++ WN M+ A Q+ + L
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIE-PGSQHYATMVDLLG 374
+M+ G K ++IT +L A S+ E G+ + + GI+ G Y ++D+
Sbjct: 409 EMQK-QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ-GIQFEGMNSY--LIDMYS 464
Query: 375 RAGKLQDAVQVIE-EMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQ 424
++G ++ + ++ E E ++ W ++++G +G TE V ++ EQ
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 152/295 (51%), Gaps = 15/295 (5%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
+Y T+ L A ++ R+ G Q HA +I+ G++ ++ +LI+ YSK+ L S ++F
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLF 476
Query: 81 NSSPH--RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS 138
S + R TW+S+IS + QN FR+ML + P+ + + +C+ + S
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+ +G LH +++ +VFVAS+LVDMY+K G I YA ++F + RN V+++ MI G
Sbjct: 537 VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQI-----HGWCFK 253
Y Q G E A+ LF + E + + T +VL C S L++ G +I + +
Sbjct: 597 YGQHGMGERAISLFLS-MQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL-QVRNLG-MWNAMLIACAQHAH 306
S + C + L + G V AY+ + L + N+ +W ++L +C H
Sbjct: 656 PSSEHYCCITDML----GRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGE 706
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 11/295 (3%)
Query: 73 PNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLP--DDHILPTAA 130
P + Q+F++ P + W+++I F N+LPH AL F+ +M + D + +
Sbjct: 55 PQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTL 114
Query: 131 KSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAK------CGEIGYARNVFDEM 184
K+CA ++ G ++H ++ + V +SL++MY C E R VFD M
Sbjct: 115 KACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNM 174
Query: 185 PHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG 244
+NVV+W+ +I YV+ G + EA R F +++ +V + + +V S ++
Sbjct: 175 RRKNVVAWNTLISWYVKTGRNAEACRQFG-IMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 245 KQIHGWCFK--TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACA 302
+G K + FV SS IS+Y++ G +E + + F+ RN+ +WN M+
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY 357
Q+ + ELF + + + +T+L A S VE G+ + + K++
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 258/468 (55%), Gaps = 3/468 (0%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
+L G++LHA++IK G ++ + + LI+ YSK L + F + +W+++I+
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
+AQND AL+ FR + + + D+ IL + ++ + L S+ + +H L+ L
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-L 519
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
D + + LVD+Y KC +GYA VF+ + ++VVSW+ MI G + EA+ LF++ +
Sbjct: 520 DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR-M 578
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
VE + + L +L + + L G++IH + + F +A +++ +Y+ CG +
Sbjct: 579 VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
+ A F+ ++ + L + +M+ A H ELF++M+ V P+ I+FL +LYA
Sbjct: 639 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH-ENVSPDHISFLALLYA 697
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
CSHAGL+++G+ + ++M+ +Y +EP +HY +VD+LGRA + +A + ++ M EPT
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAE 757
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLR 456
VW ALL CR H + E+ A R+ E + G VL+SN ++
Sbjct: 758 VWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMK 817
Query: 457 DQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAK 504
G++K G SW+E +VH F A D+SH ++ EIY KL E+ ++ +
Sbjct: 818 ASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 865
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 4/289 (1%)
Query: 36 RSLRRGLQLHAHIIKTGLE-TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
R++ +G QLH+ I KT + L+ L+ Y K + + +VF+ P R+A W+++
Sbjct: 94 RAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTM 153
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
I ++ N P AL + M G+ P K+CA L I G LH+L +K Y
Sbjct: 154 IGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGY 213
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGYVQLGEDEEALRLFK 213
H F+ ++LV MYAK ++ AR +FD + + V W+ ++ Y G+ E L LF+
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFR 273
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS-CFVASSLISLYSK 272
++ + N +T+ S L C + +LGK+IH K+S SS +V ++LI++Y++
Sbjct: 274 EMHM-TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 273 CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
CG + A + ++ ++ WN+++ Q+ E F M + G
Sbjct: 333 CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 207/412 (50%), Gaps = 15/412 (3%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR-S 87
L A R +R G +LH+ ++K G + + + L++ Y+K +++ ++F+ +
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
A W+S++SS++ + L+ FR+M G P+ + + +A +C S +G +HA
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 148 LALKTAYH-LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
LK++ H +++V ++L+ MY +CG++ A + +M + +VV+W+ +I GYVQ +
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 368
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
EAL F ++ ++ +++S++ G + L G ++H + K +DS+ V ++L
Sbjct: 369 EALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
I +YSKC +AF + ++L W ++ AQ+ ELF + + ++ +
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV-AKKRMEID 486
Query: 327 FITFLCVLYACS--HAGLVEKGQHYFELMKK--DYGIEPGSQHYATMVDLLGRAGKLQDA 382
+ +L A S + L+ K H L K D I+ +VD+ G+ + A
Sbjct: 487 EMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ------NELVDVYGKCRNMGYA 540
Query: 383 VQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
+V E + + S W ++++ ++G+ A + R+ E G + + +L
Sbjct: 541 TRVFESIKGKDVVS-WTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 186/371 (50%), Gaps = 7/371 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPL-LSHHLINFYSKTQLPNSSLQV 79
N TI + L A + G ++HA ++K+ + L + + LI Y++ + ++
Sbjct: 283 NSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERI 342
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
+ TW+SLI + QN + AL+FF M+ G D+ + + + LS++
Sbjct: 343 LRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNL 402
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
G+ LHA +K + ++ V ++L+DMY+KC Y F M ++++SW+ +I GY
Sbjct: 403 LAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGY 462
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
Q EAL LF+ V ++ + +++ L S+LR + + K+IH + +
Sbjct: 463 AQNDCHVEALELFRDV-AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT 521
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
+ + L+ +Y KC + A + FE ++ +++ W +M+ + A + + + ELF +M
Sbjct: 522 -VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQH-YFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
G+ + + LC+L A + + KG+ + L++K + +E GS A +VD+ G
Sbjct: 581 T-GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE-GSIAVA-VVDMYACCGD 637
Query: 379 LQDAVQVIEEM 389
LQ A V + +
Sbjct: 638 LQSAKAVFDRI 648
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 209 LRLFKQVLVEE----DVGVNDFTLSS---VLRVCGASTLLELGKQIHGWCFKT--SFDSS 259
L F VL E DV N+ + + VL +CG + G+Q+H FKT SF+
Sbjct: 57 LACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD 116
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
F+A L+ +Y KCG+++ A + F+E+ R WN M+ A + L+ M+
Sbjct: 117 -FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR- 174
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
V GV +F +L AC+ + G L+ K G +V + + L
Sbjct: 175 VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK-LGYHSTGFIVNALVSMYAKNDDL 233
Query: 380 QDAVQVIEEMPMEPTESVWGALLTGCRIHGDT 411
A ++ + + +W ++L+ G +
Sbjct: 234 SAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 259/501 (51%), Gaps = 33/501 (6%)
Query: 23 RTICNHLLA-LTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFN 81
R + N+ + L +S +++A II GL + +++F K + + + ++FN
Sbjct: 7 REVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFN 66
Query: 82 SSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGL-LPDDHILPTAAKSCAALSSIH 140
+ + ++S+I ++ N L + ++Q+LR LPD P KSCA+L S +
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
+G +H K V ++L+DMY K ++ A VFDEM R+V+SW+ ++ GY
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 201 QLGEDEEALRLFKQVLVEEDV----------------------------GV--NDFTLSS 230
+LG+ ++A LF +L + V G+ ++ +L S
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRN 290
VL C LELGK IH + + F V ++LI +YSKCG + A Q F +++ ++
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD 306
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
+ W+ M+ A H + + E F +M+ VKPN ITFL +L ACSH G+ ++G YF
Sbjct: 307 VISWSTMISGYAYHGNAHGAIETFNEMQR-AKVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 351 ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGD 410
++M++DY IEP +HY ++D+L RAGKL+ AV++ + MPM+P +WG+LL+ CR G+
Sbjct: 366 DMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGN 425
Query: 411 TELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
++A D + E G VLL+N KM+R++ +KK G S +E
Sbjct: 426 LDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485
Query: 471 EGNRVHTFAAGDRSHAKTVEI 491
N V F +GD S EI
Sbjct: 486 VNNIVQEFVSGDNSKPFWTEI 506
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 260/500 (52%), Gaps = 38/500 (7%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
Q+H +I+ G ++ + + +I +Y+K S+ +VF+ R +W+S+IS ++Q+
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 103 LPHLALDFFRQMLRIG-LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
++ ML P+ + + ++C S + GL +H ++ +D+ +
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
++++ YAKCG + YAR +FDEM ++ V++ +I GY+ G +EA+ LF ++ E +
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM---ESI 329
Query: 222 GV---------------------------------NDFTLSSVLRVCGASTLLELGKQIH 248
G+ N TLSS+L S+ L+ GK+IH
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 249 GWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTN 308
+ + D++ +V +S+I Y+K G + GA + F+ + R+L W A++ A A H ++
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 309 RTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYAT 368
LF+QM+ +G KP+ +T VL A +H+G + QH F+ M Y IEPG +HYA
Sbjct: 450 SACSLFDQMQCLG-TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYAC 508
Query: 369 MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVS 428
MV +L RAGKL DA++ I +MP++P VWGALL G + GD E+A + DR+FE +
Sbjct: 509 MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPEN 568
Query: 429 SGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKT 488
+G +++N ++ G+KK G SW+E + +F A D S ++
Sbjct: 569 TGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERS 628
Query: 489 VEIYNKLEELGDEMAKAGYV 508
E+Y +E L + M+ Y+
Sbjct: 629 KEMYEIIEGLVESMSDKEYI 648
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 189/422 (44%), Gaps = 47/422 (11%)
Query: 42 LQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQN 101
LQLHA I+ ++ L+ LI+FY++ +L VF+ R+A ++++L+ ++
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH---------VGLSLHALALKT 152
++ A F + D P + L ++ + +H ++
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
+ DVFV + ++ Y KC I AR VFDEM R+VVSW+ MI GY Q G E+ +++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
K +L D N T+ SV + CG S+ L G ++H + + +++I Y+K
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 273 CGAVEGAYQAFEELQVRN-------------------------------LGMWNAMLIAC 301
CG+++ A F+E+ ++ L WNAM+
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 302 AQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HYFELMKKDYGI 359
Q+ H F +M G +PN +T +L + +++ ++ G+ H F + G
Sbjct: 342 MQNNHHEEVINSFREMIRCGS-RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN---GA 397
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVAD 419
+ +++D + G L A +V + + + W A++T +HGD++ A + D
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHGDSDSACSLFD 456
Query: 420 RV 421
++
Sbjct: 457 QM 458
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 11/279 (3%)
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+HV L LHA + + D F+AS L+ Y + A +VFDE+ RN S++ ++
Sbjct: 39 LHV-LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIA 97
Query: 199 YVQLGEDEEALRLF-----KQVLVEEDVGVNDFTLSSVLRV---CGASTLLELGKQIHGW 250
Y +A LF + + ++S VL+ C L L +Q+HG+
Sbjct: 98 YTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157
Query: 251 CFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRT 310
+ FDS FV + +I+ Y+KC +E A + F+E+ R++ WN+M+ +Q
Sbjct: 158 VIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC 217
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
++++ M + KPN +T + V AC + + G + M +++ I+ ++
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVI 276
Query: 371 DLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
+ G L A + +EM E +GA+++G HG
Sbjct: 277 GFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHG 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ + L +LT+S +L+ G ++HA I+ G + ++ +I+ Y+K + +VF
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
++ RS W+++I+++A + A F QM +G PDD L TA S A S
Sbjct: 425 DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL-TAVLSAFAHSG-D 482
Query: 141 VGLSLHAL-ALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHRNVVS-WSGMI 196
++ H ++ T Y ++ V + +V + ++ G++ A +MP + W ++
Sbjct: 483 SDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALL 542
Query: 197 YGYVQLGEDEEAL----RLFK 213
G LG+ E A RLF+
Sbjct: 543 NGASVLGDLEIARFACDRLFE 563
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 216/387 (55%), Gaps = 2/387 (0%)
Query: 116 RIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIG 175
R G D + L +A +SC G H LALK + DV++ SSLV +Y GE+
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 176 YARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVC 235
A VF+EMP RNVVSW+ MI G+ Q + L+L+ + + + ND+T +++L C
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK-MRKSTSDPNDYTFTALLSAC 231
Query: 236 GASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWN 295
S L G+ +H S +++SLIS+Y KCG ++ A++ F++ +++ WN
Sbjct: 232 TGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWN 291
Query: 296 AMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKK 355
+M+ AQH + ELFE M G KP+ IT+L VL +C HAGLV++G+ +F LM
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-A 350
Query: 356 DYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELAS 415
++G++P HY+ +VDLLGR G LQ+A+++IE MPM+P +WG+LL CR+HGD
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 416 YVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRV 475
A+ + +V L+N K+++D+G+K G SW+E N V
Sbjct: 411 RAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYV 470
Query: 476 HTFAAGDRSHAKTVEIYNKLEELGDEM 502
F A D S+ + +EI + L L D M
Sbjct: 471 FMFKAEDGSNCRMLEIVHVLHCLIDHM 497
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 1/272 (0%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
+R R G H +K G + L L+ Y + ++ +VF P R+ +W+++
Sbjct: 133 NRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAM 192
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
IS FAQ + L + +M + P+D+ +C ++ G S+H L
Sbjct: 193 ISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGL 252
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
+ +++SL+ MY KCG++ A +FD+ +++VVSW+ MI GY Q G +A+ LF+
Sbjct: 253 KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFEL 312
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG 274
++ + + T VL C + L++ G++ + S L+ L + G
Sbjct: 313 MMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 275 AVEGAYQAFEELQVR-NLGMWNAMLIACAQHA 305
++ A + E + ++ N +W ++L +C H
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T L A T S +L +G +H + GL++ +S+ LI+ Y K + ++F
Sbjct: 220 NDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF 279
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQML-RIGLLPDDHILPTAAKSCAALSSI 139
+ ++ +W+S+I+ +AQ+ L A++ F M+ + G PD SC +
Sbjct: 280 DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLV 339
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYG 198
G L + ++ S LVD+ + G + A + + MP + N V W +++
Sbjct: 340 KEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFS 399
Query: 199 YVQLGEDEEALRLFKQ-VLVEEDVGVNDFTLSSVLRVCG----ASTLLELGK 245
G+ +R ++ +++E D L+++ G A+T+ +L K
Sbjct: 400 CRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMK 451
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/585 (28%), Positives = 287/585 (49%), Gaps = 48/585 (8%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N TI + + A + + + +G ++H+ +K G L+ + L++ YSK + +VF
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+S ++ TW+S+I+ + Q A + F +M L P+
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN------------------ 452
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP-----HRNVVSWSGM 195
+ ++++ Y K G+ G A ++F M RN +W+ +
Sbjct: 453 -----------------IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
I GY+Q G+ +EAL LF+++ + N T+ S+L C ++ ++IHG + +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMP-NSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
D+ V ++L Y+K G +E + F ++ +++ WN+++ H LF
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGR 375
QMK+ G+ PN T ++ A G V++G+ F + DY I P +H + MV L GR
Sbjct: 615 QMKT-QGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGR 673
Query: 376 AGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLL 435
A +L++A+Q I+EM ++ +W + LTGCRIHGD ++A + A+ +F ++ ++
Sbjct: 674 ANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIV 733
Query: 436 SNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKL 495
S K RD +KK G SW+E N +HTF GD+S T +Y +
Sbjct: 734 SQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV 793
Query: 496 EELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITF--PQERPIRVMK 553
E++ + + ++E G EE T HSE+ A+AFGLI+ + IR++K
Sbjct: 794 EKMS-RLDNRSDQYNGELWIEEEGREE---TCGIHSEKFAMAFGLISSSGASKTTIRILK 849
Query: 554 NLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
NLR+C DCH K++SK G +++ D H F++G C+C DYW
Sbjct: 850 NLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 174/373 (46%), Gaps = 42/373 (11%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIP--LLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS 92
S S+ G LHA GL T P + L++ Y+K + +VF+S R+ TWS
Sbjct: 94 SGSIHLGRILHARF---GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWS 150
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
++I ++++ + FR M++ G+LPDD + P + CA + G +H++ +K
Sbjct: 151 AMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKL 210
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
+ V++S++ +YAKCGE+ +A F M R+V++W+ ++ Y Q G+ EEA+ L
Sbjct: 211 GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELV 270
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
K++ E G++ ++ + + G + L K
Sbjct: 271 KEM---EKEGISPGLVTWNILIGGYNQL------------------------------GK 297
Query: 273 CGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFL 331
C A Q E + ++ W AM+ + + ++F +M + GV PN +T +
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM-FLAGVVPNAVTIM 356
Query: 332 CVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPM 391
+ ACS ++ +G + K G ++VD+ + GKL+DA +V + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVK-MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN 415
Query: 392 EPTESVWGALLTG 404
+ + W +++TG
Sbjct: 416 KDVYT-WNSMITG 427
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 134/260 (51%), Gaps = 6/260 (2%)
Query: 131 KSCAALSSIHVGLSLHA-LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNV 189
+SC SIH+G LHA L T DVFV + L+ MYAKCG I AR VFD M RN+
Sbjct: 89 ESCIDSGSIHLGRILHARFGLFT--EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL 146
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHG 249
+WS MI Y + E +LF+ +++++ V +DF +L+ C +E GK IH
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFR-LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 250 WCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNR 309
K S V++S++++Y+KCG ++ A + F ++ R++ WN++L+A Q+
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATM 369
EL ++M+ G+ P +T+ ++ + G + + M+ +GI + M
Sbjct: 266 AVELVKEMEK-EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAM 323
Query: 370 VDLLGRAGKLQDAVQVIEEM 389
+ L G A+ + +M
Sbjct: 324 ISGLIHNGMRYQALDMFRKM 343
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 42/255 (16%)
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
TW+++IS N + + ALD FR+M G++P+ + +A +C+ L I+ G +H++A
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEAL 209
+K + DV V +SLVDMY+KCG++ AR VFD + +++V +W+ MI GY Q G +A
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAY 438
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
LF ++ +D L I W +++IS
Sbjct: 439 ELFTRM---QDAN--------------------LRPNIITW-------------NTMISG 462
Query: 270 YSKCGAVEGAYQAFEELQV-----RNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
Y K G A F+ ++ RN WN ++ Q+ + ELF +M+
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ-FSRFM 521
Query: 325 PNFITFLCVLYACSH 339
PN +T L +L AC++
Sbjct: 522 PNSVTILSLLPACAN 536
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 164/368 (44%), Gaps = 36/368 (9%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +H+ +IK G+ + +S+ ++ Y+K + + + F R W+S++ ++ Q
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
N A++ ++M + G+ P GL + + L
Sbjct: 260 NGKHEEAVELVKEMEKEGISP--------------------GLVTWNILIGGYNQLGKCD 299
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
A+ +D+ K G +VF +W+ MI G + G +AL +F+++ +
Sbjct: 300 AA--MDLMQKMETFGITADVF---------TWTAMISGLIHNGMRYQALDMFRKMFLA-G 347
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
V N T+ S + C ++ G ++H K F V +SL+ +YSKCG +E A
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
+ F+ ++ +++ WN+M+ Q + + +ELF +M+ ++PN IT+ ++
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQD-ANLRPNIITWNTMISGYIKN 466
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME---PTESV 397
G + F+ M+KD ++ + + ++ + GK +A+++ +M P
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 398 WGALLTGC 405
+LL C
Sbjct: 527 ILSLLPAC 534
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 232/446 (52%), Gaps = 5/446 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
++C+ L L L G Q+H + +K+GL + L YSK S ++F
Sbjct: 455 SVCSLLSVLD---CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGI 511
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
P + W+S+IS F + A+ F +ML G PD+ L C++ S+ G
Sbjct: 512 PFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGK 571
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H L+ + + S+LV+MY+KCG + AR V+D +P + VS S +I GY Q G
Sbjct: 572 EIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHG 631
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
++ LF+ +V ++ F +SS+L+ S LG Q+H + K + V
Sbjct: 632 LIQDGFLLFRD-MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG 690
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
SSL+++YSK G+++ +AF ++ +L W A++ + AQH N +++ MK G
Sbjct: 691 SSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE-KGF 749
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
KP+ +TF+ VL ACSH GLVE+ + M KDYGIEP ++HY MVD LGR+G+L++A
Sbjct: 750 KPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAE 809
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXX 443
I M ++P VWG LL C+IHG+ EL A + E +G + LSN
Sbjct: 810 SFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVG 869
Query: 444 XXXXXXXXXKMLRDQGIKKETGLSWV 469
K+++ G++KE G S V
Sbjct: 870 EWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 203/387 (52%), Gaps = 19/387 (4%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A LR G + A +IK G E + + +++ Y+K +++VF+ P+ S
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+W+ ++S + +++ AL+ F++M G+ ++ + + +C S + +HA
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVF---DEMPHRNVVSWSGMIYGYVQLGED 205
K+ ++LD VA++L+ MY+K G+I + VF D++ +N+V+ MI + Q +
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNV--MITSFSQSKKP 434
Query: 206 EEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASS 265
+A+RLF ++L +E + ++F++ S+L V L LGKQ+HG+ K+ V SS
Sbjct: 435 GKAIRLFTRML-QEGLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLTVGSS 490
Query: 266 LISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP 325
L +LYSKCG++E +Y+ F+ + ++ W +M+ ++ + LF +M G P
Sbjct: 491 LFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD-DGTSP 549
Query: 326 NFITFLCVLYACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
+ T VL CS + +G+ H + L GI+ G + +V++ + G L+ A
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRA---GIDKGMDLGSALVNMYSKCGSLKLAR 606
Query: 384 QVIEEMP-MEPTESVWGALLTGCRIHG 409
QV + +P ++P +L++G HG
Sbjct: 607 QVYDRLPELDPVSC--SSLISGYSQHG 631
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 184/392 (46%), Gaps = 32/392 (8%)
Query: 47 HIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHL 106
H IK G ++ LI+ +SK + +VF S + W+++I+ +N
Sbjct: 175 HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA 234
Query: 107 ALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVD 166
D F +M PD + + +CA+L + G + A +K DVFV +++VD
Sbjct: 235 VFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVD 293
Query: 167 MYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF 226
+YAKCG + A VF +P+ +VVSW+ M+ GY + + AL +FK+ + V +N+
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKE-MRHSGVEINNC 352
Query: 227 TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
T++SV+ CG +++ Q+H W FK+ F VA++LIS+YSK G ++ + Q FE+L
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Query: 287 -QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF--ITFLCVLYACS----- 338
++ + N M+ + +Q + LF +M G F + L VL +
Sbjct: 413 DDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQV 472
Query: 339 -----HAGLV---EKGQHYFELMKKDYGIEPGSQHY-----------ATMVDLLGRAGKL 379
+GLV G F L K +E + + A+M+ G L
Sbjct: 473 HGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 380 QDAVQVIEEM---PMEPTESVWGALLTGCRIH 408
++A+ + EM P ES A+LT C H
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 170/369 (46%), Gaps = 7/369 (1%)
Query: 37 SLRRGLQLHAHIIKTGLETIPL-LSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
+LR L AH+++ L + L+ L+++YS + + ++F++ P + + +I
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
S + Q+ L +L FF +M +G ++ + +C+AL + + +K Y
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
V S+L+D+++K A VF + NV W+ +I G ++ LF ++
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
V + +T SSVL C + L GK + K + FV ++++ LY+KCG
Sbjct: 243 CVGFQ-KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGH 300
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
+ A + F + ++ W ML + E+F++M+ GV+ N T V+
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH-SGVEINNCTVTSVIS 359
Query: 336 ACSHAGLV-EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
AC +V E Q + + K + ++ S A ++ + ++G + + QV E++
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLD--SSVAAALISMYSKSGDIDLSEQVFEDLDDIQR 417
Query: 395 ESVWGALLT 403
+++ ++T
Sbjct: 418 QNIVNVMIT 426
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 11/252 (4%)
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
DVF+ SL+ Y+ G + A +FD +P +VVS + MI GY Q EE+LR F ++
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
N+ + SV+ C A + + K + V S+LI ++SK
Sbjct: 142 HF-LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
E AY+ F + N+ WN ++ ++ + F+LF +M VG KP+ T+ VL
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPDSYTYSSVLA 259
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHY---ATMVDLLGRAGKLQDAVQVIEEMPME 392
AC+ +EK + F + + I+ G++ +VDL + G + +A++V +P
Sbjct: 260 ACAS---LEKLR--FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-N 313
Query: 393 PTESVWGALLTG 404
P+ W +L+G
Sbjct: 314 PSVVSWTVMLSG 325
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 257/512 (50%), Gaps = 37/512 (7%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +LH H++K GL + + + L+ YS L + + VF+ +W+ +IS + +
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
+++ +M R + P L +C+ + + +H + + +
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 161 ASSLVDMYAKCGEI-----------------------GY--------ARNVFDEMPHRNV 189
++LV+ YA CGE+ GY AR FD+MP R+
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQI 247
+SW+ MI GY++ G E+L +F+++ + G+ ++FT+ SVL C LE+G+ I
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREM---QSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390
Query: 248 HGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHT 307
+ K + V ++LI +Y KCG E A + F ++ R+ W AM++ A +
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
++F QM+ + ++P+ IT+L VL AC+H+G+V++ + +F M+ D+ IEP HY
Sbjct: 451 QEAIKVFFQMQDMS-IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 368 TMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
MVD+LGRAG +++A +++ +MPM P VWGALL R+H D +A A ++ E
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 428 SSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAK 487
+ + LL N + + D IKK G S +E H F AGD+SH +
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629
Query: 488 TVEIYNKLEELGDEMAKAGYVADTSFVLKEVG 519
+ EIY KLEEL E A Y+ DTS +L E G
Sbjct: 630 SEEIYMKLEELAQESTFAAYLPDTSELLFEAG 661
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 181/410 (44%), Gaps = 46/410 (11%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSL--QVFNSSPHRSATTWSSLISSFAQ 100
QLH+ I G+ P L F+ + S ++F P W+++I +++
Sbjct: 52 QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSK 111
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS-SIHVGLSLHALALKTAYHLDVF 159
D + + ML+ G+ PD H P ++ G LH +K +++
Sbjct: 112 VDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLY 171
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
V ++LV MY+ CG + AR VFD +V SW+ MI GY ++ E EE++ L V +E
Sbjct: 172 VQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL--VEMER 229
Query: 220 D-VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
+ V TL VL C +L K++H + + + S + ++L++ Y+ CG ++
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHT------------------------------- 307
A + F ++ R++ W +++ + +
Sbjct: 290 AVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCF 349
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ---HYFELMKKDYGIEPGSQ 364
N + E+F +M+S G + P+ T + VL AC+H G +E G+ Y + K + G+
Sbjct: 350 NESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN- 407
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
++D+ + G + A +V +M + + W A++ G +G + A
Sbjct: 408 ---ALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEA 453
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 15/263 (5%)
Query: 172 GEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL---VEEDVGVNDFTL 228
G + YA +F ++P +VV W+ MI G+ ++ D E +RL+ +L V D F L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 229 SSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV 288
+ + R GA L GK++H K S+ +V ++L+ +YS CG ++ A F+
Sbjct: 142 NGLKRDGGA---LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK 198
Query: 289 RNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA---GLVEK 345
++ WN M+ + + EL +M+ V P +T L VL ACS L ++
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMER-NLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 346 GQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGC 405
Y K EP + +V+ G++ AV++ M S W +++ G
Sbjct: 258 VHEYVSECK----TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVIS-WTSIVKGY 312
Query: 406 RIHGDTELASYVADRVFEQGHVS 428
G+ +LA D++ + +S
Sbjct: 313 VERGNLKLARTYFDQMPVRDRIS 335
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 13/202 (6%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A H SL G + +I K ++ ++ + LI+ Y K + +VF+
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R TW++++ A N A+ F QM + + PDD +C H G+
Sbjct: 430 DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACN-----HSGM 484
Query: 144 SLHALALKTAYHLDVFVASSL------VDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMI 196
A D + SL VDM + G + A + +MP + N + W G +
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVW-GAL 543
Query: 197 YGYVQLGEDEEALRLFKQVLVE 218
G +L DE L + ++E
Sbjct: 544 LGASRLHNDEPMAELAAKKILE 565
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 254/502 (50%), Gaps = 37/502 (7%)
Query: 36 RSLRRGLQLHAHIIKTGL-ETIPLLSHHL-INFYSKTQLPNSSLQVFNSSPHRSATTWSS 93
+S+ ++H +I GL E P +S L + S + + + + + W+
Sbjct: 19 KSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNF 78
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
+I F+ + P ++ + QMLR GLLPD P KS + LS+ +G SLH +K+
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138
Query: 154 YHLDVFVASSLV-------------------------------DMYAKCGEIGYARNVFD 182
D+F+ ++L+ D YAK G++ AR VFD
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 183 EMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLE 242
EM R+VV+WS MI GYV+ GE +AL +F Q++ N+ T+ SV+ C L
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258
Query: 243 LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG--MWNAMLIA 300
GK +H + + + +SLI +Y+KCG++ A+ F V+ MWNA++
Sbjct: 259 RGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 301 CAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIE 360
A H + +LF +M+ + P+ ITFLC+L ACSH GLV++ H+F+ +K+ G E
Sbjct: 319 LASHGFIRESLQLFHKMRE-SKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAE 376
Query: 361 PGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADR 420
P S+HYA MVD+L RAG ++DA I EMP++PT S+ GALL GC HG+ ELA V +
Sbjct: 377 PKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKK 436
Query: 421 VFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAA 480
+ E + G V L+N + + +G+KK G S ++ H F A
Sbjct: 437 LIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIA 496
Query: 481 GDRSHAKTVEIYNKLEELGDEM 502
D++H + +IY L+ G M
Sbjct: 497 HDKTHFHSDKIYAVLQLTGAWM 518
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 242/435 (55%), Gaps = 6/435 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS---SPHRSATTWSSL 94
L G QLH ++K+GLE+ P LI+ YS + VF+ + + S W+S+
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
+S F N+ AL Q+ + L D + L A K C ++ +GL +H+L + + Y
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
LD V S LVD++A G I A +F +P+++++++SG+I G V+ G + A LF++
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG 274
L++ + + F +S++L+VC + L GKQIHG C K ++S A++L+ +Y KCG
Sbjct: 434 -LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCG 492
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
++ F+ + R++ W +++ Q+ F F +M ++G ++PN +TFL +L
Sbjct: 493 EIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG-IEPNKVTFLGLL 551
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
AC H+GL+E+ + E MK +YG+EP +HY +VDLLG+AG Q+A ++I +MP+EP
Sbjct: 552 SACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPD 611
Query: 395 ESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKM 454
+++W +LLT C H + L + +A+++ + + LSN +
Sbjct: 612 KTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREA 671
Query: 455 LRDQGIKKETGLSWV 469
+ G KE+G+SW+
Sbjct: 672 AKKLG-AKESGMSWI 685
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 176/356 (49%), Gaps = 10/356 (2%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
LI+ Y K L + ++ +F+ P + +W+ LIS F P AL+F +M R GL+ D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLD 237
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
LP K+C+ + +G LH +K+ F S+L+DMY+ CG + YA +VF
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 183 E---MPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGAST 239
+ + +V W+ M+ G++ E+E AL L Q+ + D+ + +TLS L++C
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIY-QSDLCFDSYTLSGALKICINYV 356
Query: 240 LLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLI 299
L LG Q+H + ++ V S L+ L++ G ++ A++ F L +++ ++ ++
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR 416
Query: 300 ACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL-MKKDYG 358
C + + F LF ++ +G FI +L CS + G+ L +KK Y
Sbjct: 417 GCVKSGFNSLAFYLFRELIKLGLDADQFIVS-NILKVCSSLASLGWGKQIHGLCIKKGYE 475
Query: 359 IEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
EP + +VD+ + G++ + V + + M +E W ++ G +G E A
Sbjct: 476 SEPVTA--TALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEA 528
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 196/433 (45%), Gaps = 56/433 (12%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
++ +RG + AH+IK G+ +++++I+ Y +L + + +VF+ R+ TW++++
Sbjct: 19 QAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMV 78
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAA-KSCAALSSIHVGLSLHALALKTAY 154
S + + P+ A++ +R+ML + + +A K+C + I +G+ ++ K
Sbjct: 79 SGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL 138
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
DV + +S+VDMY K G + A + F E+ + SW+ +I GY + G +EA+ LF +
Sbjct: 139 RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHR 198
Query: 215 V-----------------------------LVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
+ + E + ++ F L L+ C LL +GK
Sbjct: 199 MPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGK 258
Query: 246 QIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF--EELQVR-NLGMWNAMLIACA 302
Q+H K+ +SS F S+LI +YS CG++ A F E+L V ++ +WN+ML
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 303 QHAHTNRTFEL----------FEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL 352
+ L F+ G +K +C+ Y GL
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALK------ICINYVNLRLGLQVHSLVVVSG 372
Query: 353 MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTE 412
+ DY + + +VDL G +QDA ++ +P + + G L+ GC G
Sbjct: 373 YELDYIVG------SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG-LIRGCVKSGFNS 425
Query: 413 LASYVADRVFEQG 425
LA Y+ + + G
Sbjct: 426 LAFYLFRELIKLG 438
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 154/305 (50%), Gaps = 9/305 (2%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
+LR GLQ+H+ ++ +G E ++ L++ ++ + ++F+ P++ +S LI
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR 416
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
++ LA FR+++++GL D I+ K C++L+S+ G +H L +K Y
Sbjct: 417 GCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYES 476
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
+ A++LVDMY KCGEI +FD M R+VVSW+G+I G+ Q G EEA R F +++
Sbjct: 477 EPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMI 536
Query: 217 VEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA--SSLISLYSK 272
++G+ N T +L C S LLE + K+ + ++ ++ L +
Sbjct: 537 ---NIGIEPNKVTFLGLLSACRHSGLLEEARSTLE-TMKSEYGLEPYLEHYYCVVDLLGQ 592
Query: 273 CGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFL 331
G + A + ++ + + +W ++L AC H + + E++ P+ T L
Sbjct: 593 AGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSL 652
Query: 332 CVLYA 336
YA
Sbjct: 653 SNAYA 657
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 160/355 (45%), Gaps = 38/355 (10%)
Query: 119 LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYAR 178
++ D ++ + C + + G S+ A +K +VF+A++++ MY + A
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60
Query: 179 NVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGAS 238
VFDEM RN+V+W+ M+ GY G+ +A+ L++++L E+ N+F S+VL+ CG
Sbjct: 61 KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 239 TLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAML 298
++LG ++ K + + +S++ +Y K G + A +F+E+ + WN ++
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 299 IACAQHAHTNRTFELFEQMKSVGGV-------------KPNFITFL-------------- 331
+ + LF +M V P + FL
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFA 240
Query: 332 --CVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI--E 387
C L ACS GL+ G+ + K G+E + ++D+ G L A V E
Sbjct: 241 LPCGLKACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQE 299
Query: 388 EMPMEPTESVWGALLTGCRIHGDTE------LASYVADRVFEQGHVSSGLNVLLS 436
++ + + +VW ++L+G I+ + E L Y +D F+ +S L + ++
Sbjct: 300 KLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICIN 354
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 25 ICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSP 84
+ N L + SL G Q+H IK G E+ P+ + L++ Y K ++ + +F+
Sbjct: 446 VSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGML 505
Query: 85 HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS 144
R +W+ +I F QN A +F +M+ IG+ P+ +C H GL
Sbjct: 506 ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACR-----HSGLL 560
Query: 145 LHALA----LKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP 185
A + +K+ Y L+ ++ +VD+ + G A + ++MP
Sbjct: 561 EEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMP 607
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 263/511 (51%), Gaps = 38/511 (7%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLP-NSSLQVFNSSPHRSATTW 91
T ++R Q+HA +IKTGL + + + ++ F + N + VF H++ W
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 92 SSLISSFAQNDLPHLALDFFRQML--RIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
+++I F+++ P +A+ F ML + P P+ K+ L G LH +
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 150 LKTAYHLDVFVASSLVDMY-------------------------------AKCGEIGYAR 178
+K D F+ ++++ MY AKCG I A+
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 179 NVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGAS 238
N+FDEMP RN VSW+ MI G+V+ G ++AL +F++ + E+DV + FT+ S+L C
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE-MQEKDVKPDGFTMVSLLNACAYL 271
Query: 239 TLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAML 298
E G+ IH + + F+ + V ++LI +Y KCG +E FE + L WN+M+
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 299 IACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYG 358
+ A + R +LF +++ G++P+ ++F+ VL AC+H+G V + +F LMK+ Y
Sbjct: 332 LGLANNGFEERAMDLFSELER-SGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYM 390
Query: 359 IEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVA 418
IEP +HY MV++LG AG L++A +I+ MP+E +W +LL+ CR G+ E+A A
Sbjct: 391 IEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAA 450
Query: 419 DRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTF 478
+ + + VLLSN +++++ ++KE G S +E VH F
Sbjct: 451 KCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEF 510
Query: 479 AAGDRSHAKTVEIYNKLEELGDEMA--KAGY 507
+ +H K+ EIY+ L+ L +++ K+G+
Sbjct: 511 ISCGGTHPKSAEIYSLLDILNWDVSTIKSGF 541
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 4/193 (2%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A + + +G +H +I++ E ++ LI+ Y K L VF +
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
P + + W+S+I A N A+D F ++ R GL PD +CA +H
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 144 SLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMIYGYV 200
L +K Y ++ + + +V++ G + A + MP + V WS ++
Sbjct: 380 EFFRL-MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACR 438
Query: 201 QLGEDEEALRLFK 213
++G E A R K
Sbjct: 439 KIGNVEMAKRAAK 451
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 255/531 (48%), Gaps = 68/531 (12%)
Query: 35 SRSLRRGLQLHAHIIKTGLETI-PLLSHHLINFYSKTQLPNSSLQVFN------------ 81
++SL++G +H H+ TG + LLS+HLI Y K P + +VF+
Sbjct: 59 TKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNN 118
Query: 82 -------------------SSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
S P R +W++++ +AQ+ H AL F+++ R G+ +
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
+ +C + + H L + +V ++ S++D YAKCG++ A+ FD
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 183 EM-------------------------------PHRNVVSWSGMIYGYVQLGEDEEALRL 211
EM P +N VSW+ +I GYV+ G AL L
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 212 FKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYS 271
F++ ++ V FT SS L + L GK+IHG+ +T+ + V SSLI +YS
Sbjct: 299 FRK-MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYS 357
Query: 272 KCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
K G++E + + F + + WN M+ A AQH ++ + + M V+PN T
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR-VQPNRTTL 416
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
+ +L ACSH+GLVE+G +FE M +GI P +HYA ++DLLGRAG ++ ++ IEEMP
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
Query: 391 MEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXX 450
EP + +W A+L CRIHG+ EL AD + + SS +LLS+
Sbjct: 477 FEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEK 536
Query: 451 XXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRS--HAKTVEIYNKLEELG 499
+++ + + KE +SW+E +V F D S HA+ EIY L L
Sbjct: 537 LRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 37/234 (15%)
Query: 228 LSSVLRVCGASTLLELGKQIHGWCFKTSFD-SSCFVASSLISLYSKCGAVEGAYQAFEEL 286
L+S+L+ CG + L+ GK IH T F + +++ LI +Y KCG A + F+++
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 287 QVRNL-------------GM------------------WNAMLIACAQHAHTNRTFELFE 315
+RNL GM WN M+I AQ + + ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVE-KGQHYFELMKKDYGIEPGSQHYATMVDLLG 374
+ + G+K N +F +L AC + ++ Q + +++ G +++D
Sbjct: 169 EFRR-SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA--GFLSNVVLSCSIIDAYA 225
Query: 375 RAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVS 428
+ G+++ A + +EM ++ +W L++G GD E A + + E+ VS
Sbjct: 226 KCGQMESAKRCFDEMTVKDIH-IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 241/461 (52%), Gaps = 2/461 (0%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
R ++ G +H H+I G T +++ L Y++ L +F + R +W+SLI
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
++ + A++ F +M + P++ + +CA+LS + G LH L +
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
+ V++S++ MY+ CG + A +F M R+++SWS +I GY Q G EE + F
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW- 401
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
+ + DF L+S+L V G ++E G+Q+H + + V SSLI++YSKCG+
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
++ A F E ++ AM+ A+H + +LFE+ VG +P+ +TF+ VL
Sbjct: 462 IKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG-FRPDSVTFISVLT 520
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
AC+H+G ++ G HYF +M++ Y + P +HY MVDLL RAG+L DA ++I EM + +
Sbjct: 521 ACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDD 580
Query: 396 SVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKML 455
VW LL C+ GD E A+R+ E + V L+N K +
Sbjct: 581 VVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNM 640
Query: 456 RDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLE 496
+ +G+ KE G S ++ + V F +GDR H ++ +IYN LE
Sbjct: 641 KAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 189/386 (48%), Gaps = 4/386 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A S ++ G LHA+ +KT L + + L++ Y + + S +VF+ P R+A
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNA 174
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
TW+++I+ L +F +M R L D + A K+CA L + G ++H
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
+ + + VA+SL MY +CGE+ +F+ M R+VVSW+ +I Y ++G++ +A
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
+ F + + V N+ T +S+ C + + L G+Q+H + S V++S++
Sbjct: 295 VETFIK-MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
+YS CG + A F+ ++ R++ W+ ++ Q F+ F M+ G KP
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ-SGTKPTDF 412
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
+L + ++E G+ L +G+E S ++++++ + G +++A + E
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHAL-ALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 389 MPMEPTESVWGALLTGCRIHGDTELA 414
+ S+ A++ G HG ++ A
Sbjct: 472 TDRDDIVSL-TAMINGYAEHGKSKEA 496
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 139/263 (52%), Gaps = 4/263 (1%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRI--GLLPDDHILPTAAKSCAA 135
QVF+ PH +W+S+I + + AL F M + + PD +L K+C
Sbjct: 61 QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ 120
Query: 136 LSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGM 195
S+I G SLHA A+KT+ V+V SSL+DMY + G+I + VF EMP RN V+W+ +
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
I G V G +E L F ++ E++ + +T + L+ C ++ GK IH
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
F ++ VA+SL ++Y++CG ++ FE + R++ W ++++A + + E F
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299
Query: 316 QMKSVGGVKPNFITFLCVLYACS 338
+M++ V PN TF + AC+
Sbjct: 300 KMRN-SQVPPNEQTFASMFSACA 321
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 8/236 (3%)
Query: 172 GEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV-LVEEDVGVNDFTLSS 230
G + AR VFD+MPH ++VSW+ +I YV +EAL LF + +V+ V + LS
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRN 290
VL+ CG S+ + G+ +H + KTS SS +V SSL+ +Y + G ++ + + F E+ RN
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--H 348
W A++ F +M + + TF L AC+ V+ G+ H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTY-TFAIALKACAGLRQVKYGKAIH 232
Query: 349 YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+++ + ATM G++QD + + E M S W +L+
Sbjct: 233 THVIVRGFVTTLCVANSLATMYT---ECGEMQDGLCLFENMSERDVVS-WTSLIVA 284
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 151/347 (43%), Gaps = 10/347 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N +T + A L G QLH +++ GL +S+ ++ YS S+ +F
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLF 368
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
R +WS++I + Q +F M + G P D L + ++ I
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G +HALAL + V SSL++MY+KCG I A +F E ++VS + MI GY
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 201 QLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKT-SFD 257
+ G+ +EA+ LF++ L VG + T SVL C S L+LG +T +
Sbjct: 489 EHGKSKEAIDLFEKSL---KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMR 545
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQ-VRNLGMWNAMLIACAQHAHTNRTFELFEQ 316
+ ++ L + G + A + E+ ++ +W +LIAC R E+
Sbjct: 546 PAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAER 605
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGI-EPG 362
+ + + L +Y S G +E+ + + MK I EPG
Sbjct: 606 ILELDPTCATALVTLANIY--SSTGNLEEAANVRKNMKAKGVIKEPG 650
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 247/487 (50%), Gaps = 37/487 (7%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+HA II+T + + LI S + + VF+ + + ++++I F +
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
+ + +M+ +LPD++++ + K+C + V +HA LK + V
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLK 163
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRN-------------------------------VVSW 192
++++Y K GE+ A+ +FDEMP R+ V W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 193 SGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF 252
+ MI G V+ E +AL LF+++ +E +V N+FT VL C LELG+ +H +
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSACSDLGALELGRWVHSFVE 282
Query: 253 KTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFE 312
+ S FV ++LI++YS+CG + A + F ++ +++ +N M+ A H +
Sbjct: 283 NQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAIN 342
Query: 313 LFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDL 372
F M + G +PN +T + +L ACSH GL++ G F MK+ + +EP +HY +VDL
Sbjct: 343 EFRDMVN-RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDL 401
Query: 373 LGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN 432
LGR G+L++A + IE +P+EP + G LL+ C+IHG+ EL +A R+FE + SG
Sbjct: 402 LGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTY 461
Query: 433 VLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIY 492
VLLSN + +RD GI+KE G S +E N++H F GD +H IY
Sbjct: 462 VLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIY 521
Query: 493 NKLEELG 499
+L+EL
Sbjct: 522 QRLQELN 528
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 152/317 (47%), Gaps = 46/317 (14%)
Query: 126 LPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
L + +SC ++ + S+HA ++T + D FV L+ + + + YA +VF +
Sbjct: 32 LISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS 88
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
+ NV ++ MI G+V G + + L+ + ++ V +++ ++SVL+ C L++ +
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHR-MIHNSVLPDNYVITSVLKACD----LKVCR 143
Query: 246 QIHGWCFKTSFDSSCFV-------------------------------ASSLISLYSKCG 274
+IH K F SS V A+ +I+ YS+CG
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
++ A + F+++++++ W AM+ ++ N+ ELF +M+ + V N T +CVL
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQ-MENVSANEFTAVCVL 262
Query: 335 YACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
ACS G +E G+ H F ++ +E + ++++ R G + +A +V M +
Sbjct: 263 SACSDLGALELGRWVHSF---VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
Query: 393 PTESVWGALLTGCRIHG 409
S + +++G +HG
Sbjct: 320 DVIS-YNTMISGLAMHG 335
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 257/506 (50%), Gaps = 40/506 (7%)
Query: 32 LTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQ--VFNSSPHRSAT 89
++ SR L Q+ + +I +GL L L+ F + +L N S +F+ +
Sbjct: 31 ISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCT-LRLCNLSYARFIFDRFSFPNTH 89
Query: 90 TWSSLISSFAQNDLPHL--ALDFFRQML-RIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+++++++++ + H A FFR M+ R P+ I P KS LSS +H
Sbjct: 90 LYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVH 149
Query: 147 ALALKTAYHLDVFVASSLVDMYAK-CGEIGYARNVFDEMPHRNVVSWSGMIYGY------ 199
K+ +HL V V ++L+ YA I AR +FDEM RNVVSW+ M+ GY
Sbjct: 150 THLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDI 209
Query: 200 ---VQLGEDE----------------------EALRLFKQVLVEEDVGVNDFTLSSVLRV 234
V L ED EA+ LF++++ E + N+ T+ VL
Sbjct: 210 SNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSA 269
Query: 235 CGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMW 294
C + L+L K IH + ++ S FV++SL+ LY KCG +E A F+ ++L W
Sbjct: 270 CAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAW 329
Query: 295 NAMLIACAQHAHTNRTFELFEQMK--SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL 352
N+M+ A H + +FE+M ++ +KP+ ITF+ +L AC+H GLV KG+ YF+L
Sbjct: 330 NSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDL 389
Query: 353 MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTE 412
M +GIEP +HY ++DLLGRAG+ +A++V+ M M+ E++WG+LL C+IHG +
Sbjct: 390 MTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLD 449
Query: 413 LASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEG 472
LA + + G +++N KM++ Q K G S +E
Sbjct: 450 LAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEID 509
Query: 473 NRVHTFAAGDRSHAKTVEIYNKLEEL 498
N VH F + D+SH +T EIY L+ L
Sbjct: 510 NEVHQFYSLDKSHPETEEIYMILDSL 535
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 254/464 (54%), Gaps = 6/464 (1%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS-SPHRSATTWSSLISSFAQN 101
Q+HA ++K GL+ + + +I+ Y+ + + +VF+ + +W+S+I+ F+++
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
+L A + F QM R + D + +C+ G SLH + +K
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT 343
Query: 162 SSLVDMYAK--CGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
++L+ MY + G + A ++F+ + ++++SW+ +I G+ Q G E+A++ F L
Sbjct: 344 NALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF-SYLRSS 402
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
++ V+D+ S++LR C L+LG+QIH K+ F S+ FV SSLI +YSKCG +E A
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 280 YQAFEELQVRNLGM-WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
+ F+++ ++ + WNAM++ AQH + +LF QM + VK + +TF +L ACS
Sbjct: 463 RKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN-QNVKLDHVTFTAILTACS 521
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
H GL+++G LM+ Y I+P +HYA VDLLGRAG + A ++IE MP+ P V
Sbjct: 522 HTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVL 581
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
L CR G+ E+A+ VA+ + E V LS+ KM++++
Sbjct: 582 KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKER 641
Query: 459 GIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
G+KK G SW+E N+V F A DRS+ +IY +++L EM
Sbjct: 642 GVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 179/375 (47%), Gaps = 10/375 (2%)
Query: 45 HAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLP 104
H + IK G + +S+ +++ Y K + +F+ P R + +W+++IS +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 105 HLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSL 164
A F M R G D + K A++ +G +H L +K Y +V+V SSL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 165 VDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVN 224
VDMYAKC + A F E+ N VSW+ +I G+VQ+ + + A L + ++ V ++
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 225 DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFE 284
T + +L + L KQ+H K + +++IS Y+ CG+V A + F+
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 285 EL-QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS--HAG 341
L ++L WN+M+ ++H FELF QM+ V+ + T+ +L ACS
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR-HWVETDIYTYTGLLSACSGEEHQ 321
Query: 342 LVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGR--AGKLQDAVQVIEEMPMEPTESVWG 399
+ K H + K G+E + ++ + + G ++DA+ + E + + S W
Sbjct: 322 IFGKSLHGMVIKK---GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS-WN 377
Query: 400 ALLTGCRIHGDTELA 414
+++TG G +E A
Sbjct: 378 SIITGFAQKGLSEDA 392
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 174/382 (45%), Gaps = 25/382 (6%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G Q+H +IK G E + L++ Y+K + + + F ++ +W++LI+ F Q
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI-------HVGLSLHALALKTA 153
D +GL+ + A + A L ++ ++ +HA LK
Sbjct: 180 ------VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLG 233
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEM-PHRNVVSWSGMIYGYVQLGEDEEALRLF 212
++ + ++++ YA CG + A+ VFD + ++++SW+ MI G+ + E A LF
Sbjct: 234 LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELF 293
Query: 213 KQV---LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
Q+ VE D+ +T + +L C GK +HG K + ++LIS+
Sbjct: 294 IQMQRHWVETDI----YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISM 349
Query: 270 YSK--CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF 327
Y + G +E A FE L+ ++L WN+++ AQ + + F ++S +K +
Sbjct: 350 YIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS-SEIKVDD 408
Query: 328 ITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE 387
F +L +CS ++ GQ L K G ++++ + + G ++ A + +
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHALATKS-GFVSNEFVISSLIVMYSKCGIIESARKCFQ 467
Query: 388 EMPMEPTESVWGALLTGCRIHG 409
++ + + W A++ G HG
Sbjct: 468 QISSKHSTVAWNAMILGYAQHG 489
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS-SPHRSATTWSSLI 95
+L+ G Q+HA K+G + + LI YSK + S+ + F S S W+++I
Sbjct: 423 TLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL---ALKT 152
+AQ+ L ++LD F QM + D +C+ I GL L L K
Sbjct: 483 LGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKI 542
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
++ + A+ VD+ + G + A+ + + MP
Sbjct: 543 QPRMEHYAAA--VDLLGRAGLVNKAKELIESMP 573
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 253/496 (51%), Gaps = 44/496 (8%)
Query: 43 QLHAHIIKTGL-ETIPLLSHHLINFYSKTQLPN--SSLQVFNSSPHRSATTWSSLISSFA 99
QLHAH ++TG+ ET LL L+ +PN + ++F+ + ++ LI ++
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLL-------IPNLVYARKLFDHHQNSCTFLYNKLIQAYY 58
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
+ PH ++ + + GL P H + A+ SS LH+ ++ + D F
Sbjct: 59 VHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 160 VASSLVDMYAKCGEIGYARNVFDEM-------------------------------PHRN 188
++L+ YAK G + AR VFDEM P +N
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 189 VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIH 248
V SW+ +I G+ Q G EAL++F + ++ V N T+ SVL C LE+G+++
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 249 GWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL-QVRNLGMWNAMLIACAQHAHT 307
G+ + F + +V ++ I +YSKCG ++ A + FEEL RNL WN+M+ + A H
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
+ LF QM G KP+ +TF+ +L AC H G+V KGQ F+ M++ + I P +HY
Sbjct: 299 DEALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG 357
Query: 368 TMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
M+DLLGR GKLQ+A +I+ MPM+P VWG LL C HG+ E+A ++ +F+
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPT 417
Query: 428 SSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSW-VEEGNRVHTFAAGDRSHA 486
+ G V++SN K+++ + + K G S+ VE G VH F D+SH
Sbjct: 418 NPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHP 477
Query: 487 KTVEIYNKLEELGDEM 502
++ EIY LEE+ M
Sbjct: 478 RSYEIYQVLEEIFRRM 493
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 259/497 (52%), Gaps = 38/497 (7%)
Query: 43 QLHAHIIKTGLETI-PLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQN 101
Q+H HII +G ++ L + L+ FY + + +VF PH ++++ +I +A+
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALK--TAYHLDVF 159
AL + +M+ G+ PD++ + + C LS I +G +H + Y ++
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 160 VASSLVDMYAKCGEIGYARN-------------------------------VFDEMPHRN 188
++++L+DMY KC E G A+ VFD+MP R+
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 189 VVSWSGMIYGYVQLGEDEEALR-LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQI 247
+VSW+ +++GY + G D+ +R LF ++ + E V + T+ S++ + L G+ +
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 248 HGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHT 307
HG + F++S+LI +Y KCG +E A+ F+ +++ +W +M+ A H +
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNG 450
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
+ +LF +M+ GV PN +T L VL ACSH+GLVE+G H F MK +G +P ++HY
Sbjct: 451 QQALQLFGRMQE-EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYG 509
Query: 368 TMVDLLGRAGKLQDAVQVIE-EMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGH 426
++VDLL RAG++++A +++ +MPM P++S+WG++L+ CR D E A + +
Sbjct: 510 SLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEP 569
Query: 427 VSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDR-SH 485
G VLLSN + + ++G+KK G S V +H F A ++ +H
Sbjct: 570 EKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNH 629
Query: 486 AKTVEIYNKLEELGDEM 502
+ EI L+ L +EM
Sbjct: 630 PRWTEIKRILQHLYNEM 646
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G +H +I+ L+ LS LI+ Y K + + VF ++ + W+S+I+
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSL-HALALKTAYHL 156
A + AL F +M G+ P++ L +C+ + GL + + + K +
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFD-EMPHRNVVSWSGMIYGYVQLGEDEEALRL 211
+ SLVD+ + G + A+++ +MP R S G I + GED E L
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAEL 559
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 227/392 (57%), Gaps = 13/392 (3%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSAT--TWSS 93
R++ G+++H I L +S L+ Y+ + +VF+ R ++ W+S
Sbjct: 106 RAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNS 165
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
LIS +A+ A+ + QM G+ PD P K+C + S+ +G ++H +K
Sbjct: 166 LISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG 225
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
+ DV+V ++LV MYAKCG+I ARNVFD +PH++ VSW+ M+ GY+ G EAL +F+
Sbjct: 226 FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFR 285
Query: 214 QVLVEEDVGVNDFTLSSVL-RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
++V+ + + +SSVL RV + G+Q+HGW + + VA++LI LYSK
Sbjct: 286 -LMVQNGIEPDKVAISSVLARVLS----FKHGRQLHGWVIRRGMEWELSVANALIVLYSK 340
Query: 273 CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLC 332
G + A F+++ R+ WNA++ A H+ + + FEQM KP+ ITF+
Sbjct: 341 RGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHR-ANAKPDGITFVS 396
Query: 333 VLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQ-VIEEMPM 391
VL C++ G+VE G+ F LM K+YGI+P +HYA MV+L GRAG +++A +++EM +
Sbjct: 397 VLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGL 456
Query: 392 EPTESVWGALLTGCRIHGDTELASYVADRVFE 423
E +VWGALL C +HG+T++ A R+FE
Sbjct: 457 EAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 120 LPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARN 179
L + I + ++C +L +I G+ +H L ++ ++S LV +YA CG A
Sbjct: 89 LTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 180 VFDEMPHRN--VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA 237
VFD M R+ +W+ +I GY +LG+ E+A+ L+ Q + E+ V + FT VL+ CG
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ-MAEDGVKPDRFTFPRVLKACGG 207
Query: 238 STLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAM 297
+++G+ IH K F +V ++L+ +Y+KCG + A F+ + ++ WN+M
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
L H + ++F M G++P+ + VL
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQ-NGIEPDKVAISSVL 303
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 215/386 (55%), Gaps = 10/386 (2%)
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
A W++++ S+ +++ P A+ + M+R +LPD + LP K+ + +G LH+
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
+A++ + D F S + +Y K GE AR VFDE P R + SW+ +I G G E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 208 ALRLF---KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF--KTSFDSSCFV 262
A+ +F K+ +E D DFT+ SV CG L L Q+H KT S +
Sbjct: 202 AVEMFVDMKRSGLEPD----DFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+SLI +Y KCG ++ A FEE++ RN+ W++M++ A + +T E F QM+ G
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG- 316
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
V+PN ITF+ VL AC H GLVE+G+ YF +MK ++ +EPG HY +VDLL R G+L++A
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 383 VQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXX 442
+V+EEMPM+P VWG L+ GC GD E+A +VA + E + G+ V+L+N
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALR 436
Query: 443 XXXXXXXXXXKMLRDQGIKKETGLSW 468
K+++ + + K S+
Sbjct: 437 GMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 7/268 (2%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +LH+ ++ G I Y K ++ +VF+ +P R +W+++I
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALAL--KTAYHLDV 158
+ A++ F M R GL PDD + + SC L + + LH L KT D+
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
+ +SL+DMY KCG + A ++F+EM RNVVSWS MI GY G EAL F+Q + E
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQ-MRE 314
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA--SSLISLYSKCGAV 276
V N T VL C L+E GK K+ F+ ++ ++ L S+ G +
Sbjct: 315 FGVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQL 373
Query: 277 EGAYQAFEELQVR-NLGMWNAMLIACAQ 303
+ A + EE+ ++ N+ +W ++ C +
Sbjct: 374 KEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 252/483 (52%), Gaps = 15/483 (3%)
Query: 34 HSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSS 93
H L+ Q+H IK G E++ + + L++ YSK + + VF+ R+ +W++
Sbjct: 288 HETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTT 347
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
+ISS + A+ F M G+ P++ + I GL +H L +KT
Sbjct: 348 MISSNKDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTG 402
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
+ + V +S + +YAK + A+ F+++ R ++SW+ MI G+ Q G EAL++F
Sbjct: 403 FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFL 462
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLEL--GKQIHGWCFKTSFDSSCFVASSLISLYS 271
E N++T SVL + + + G++ H K +S V+S+L+ +Y+
Sbjct: 463 SAAAE--TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYA 520
Query: 272 KCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFL 331
K G ++ + + F E+ +N +W +++ A + H LF +M V P+ +TFL
Sbjct: 521 KRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK-ENVAPDLVTFL 579
Query: 332 CVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPM 391
VL AC+ G+V+KG F +M + Y +EP +HY+ MVD+LGRAG+L++A +++ E+P
Sbjct: 580 SVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPG 639
Query: 392 EPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXX 451
P ES+ ++L CR+HG+ ++ + VA+ E SG V + N
Sbjct: 640 GPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEI 699
Query: 452 XKMLRDQGIKKETGLSWVEEGN-----RVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAG 506
K +R + + KE G SW++ G+ + F++GD+SH K+ EIY +E +G EM G
Sbjct: 700 RKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
Query: 507 YVA 509
VA
Sbjct: 760 KVA 762
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 195/389 (50%), Gaps = 19/389 (4%)
Query: 24 TICNHLLALTHSR-SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
T+C LAL R L+RG Q+H +G + +S+ ++ Y K +++L +F +
Sbjct: 80 TLC---LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN 136
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
+W++++S F N +AL+F +M G++ D TA C +G
Sbjct: 137 LVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLG 193
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
L L + +KT D+ V +S + MY++ G AR VFDEM ++++SW+ ++ G Q
Sbjct: 194 LQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 253
Query: 203 GE-DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
G EA+ +F+ ++ E V ++ + +SV+ C T L+L +QIHG C K ++S
Sbjct: 254 GTFGFEAVVIFRD-MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 312
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
V + L+S YSKCG +E F ++ RN+ W M+ ++ + +F M+
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMR-FD 366
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFEL-MKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
GV PN +TF+ ++ A +++G L +K + EP + + + L + L+
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALE 424
Query: 381 DAVQVIEEMPMEPTESVWGALLTGCRIHG 409
DA + E++ S W A+++G +G
Sbjct: 425 DAKKAFEDITFREIIS-WNAMISGFAQNG 452
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 9/305 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + A+ + ++ GL++H IKTG + P + + I Y+K + + + F
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF 430
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
R +W+++IS FAQN H AL F +P+++ + + A I
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDIS 489
Query: 141 V--GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
V G HA LK + V+S+L+DMYAK G I + VF+EM +N W+ +I
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISA 549
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT-SFD 257
Y G+ E + LF + +++E+V + T SVL C +++ G +I + + +
Sbjct: 550 YSSHGDFETVMNLFHK-MIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQ-VRNLGMWNAMLIACAQHAHTN---RTFEL 313
S S ++ + + G ++ A + E+ M +ML +C H + + EL
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAEL 668
Query: 314 FEQMK 318
+MK
Sbjct: 669 AMEMK 673
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 246/493 (49%), Gaps = 33/493 (6%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G + H++K LE + + + I+ ++ ++ +VF+ SP R +W+ LI+ + +
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
A+ ++ M G+ PDD + SC+ L ++ G + + + + +
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY--------------------- 199
++L+DM++KCG+I AR +FD + R +VSW+ MI GY
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 200 ----------VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHG 249
VQ ++AL LF++ + + ++ T+ L C L++G IH
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQE-MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 250 WCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNR 309
+ K S + + +SL+ +Y+KCG + A F +Q RN + A++ A H +
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATM 369
F +M G+ P+ ITF+ +L AC H G+++ G+ YF MK + + P +HY+ M
Sbjct: 474 AISYFNEMID-AGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 370 VDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSS 429
VDLLGRAG L++A +++E MPME +VWGALL GCR+HG+ EL A ++ E S
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 430 GLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTV 489
G+ VLL +M+ ++G++K G S +E V F D+S ++
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 652
Query: 490 EIYNKLEELGDEM 502
+IY++L LG M
Sbjct: 653 KIYDRLHCLGRHM 665
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 203/436 (46%), Gaps = 41/436 (9%)
Query: 27 NHLLALTHSRSLRRGL-QLHAHIIKTGLETIPLLSHHLINF--YSKTQLPNSSLQVFNSS 83
N LL+L L L Q+ A +I GL P S LI F S+++ + S+++
Sbjct: 54 NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGI 113
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL---PDDHILPTAAKSCAALSSIH 140
+ + +W+ I F++++ P + ++QMLR G PD P K CA L
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
+G + LK L V ++ + M+A CG++ AR VFDE P R++VSW+ +I GY
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
++GE E+A+ ++K ++ E V +D T+ ++ C L GK+ + + + +
Sbjct: 234 KIGEAEKAIYVYK-LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVR------------------------------- 289
+ ++L+ ++SKCG + A + F+ L+ R
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHY 349
++ +WNAM+ Q LF++M++ KP+ IT + L ACS G ++ G
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQT-SNTKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 350 FELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
++K Y + ++VD+ + G + +A+ V + + + + A++ G +HG
Sbjct: 412 HRYIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT-YTAIIGGLALHG 469
Query: 410 DTELASYVADRVFEQG 425
D A + + + G
Sbjct: 470 DASTAISYFNEMIDAG 485
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A + +L G+ +H +I K L L L++ Y+K + +L VF+
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R++ T++++I A + A+ +F +M+ G+ PD+ +C I G
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Query: 144 SLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMIY--- 197
+ +K+ ++L+ + S +VD+ + G + A + + MP + W +++
Sbjct: 511 DYFS-QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCR 569
Query: 198 --GYVQLGE 204
G V+LGE
Sbjct: 570 MHGNVELGE 578
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 246/481 (51%), Gaps = 24/481 (4%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINF----------YSKTQLPNSSLQ 78
L+ L S++ LQ+H I + L+ + L+ +++T L +SS
Sbjct: 17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSS-- 74
Query: 79 VFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS 138
+S+P +TW+ L ++ +D P ++ + +M R G+ P+ P K+CA+
Sbjct: 75 --DSTP----STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG 128
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+ G + LK + DV+V ++L+ +Y C + AR VFDEM RNVVSW+ ++
Sbjct: 129 LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTA 188
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
V+ G+ F + ++ + ++ T+ +L CG + L LGK +H +
Sbjct: 189 LVENGKLNLVFECFCE-MIGKRFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELEL 245
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
+C + ++L+ +Y+K G +E A FE + +N+ W+AM++ AQ+ +LF +M
Sbjct: 246 NCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMM 305
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
V+PN++TFL VL ACSH GLV+ G YF M+K + I+P HY MVD+LGRAG+
Sbjct: 306 KESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGR 365
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTE---LASYVADRVFEQGHVSSGLNVLL 435
L +A I++MP EP VW LL+ C IH D + + V R+ E SG V++
Sbjct: 366 LNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIV 425
Query: 436 SNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKL 495
+N +++++ +KK G S +E G H F +G ++ V IY L
Sbjct: 426 ANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
Query: 496 E 496
+
Sbjct: 486 D 486
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 243/463 (52%), Gaps = 3/463 (0%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G Q+H IK+ L + L + Y++ NS+ +VF+ +W+ +I+ A
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
N A+ F QM G +PD L + + ++ G+ +H+ +K + D+ V
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
+SL+ MY C ++ N+F++ + + VSW+ ++ +Q + E LRLFK +LV E
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
+ T+ ++LR C + L+LG Q+H + KT F+ + LI +Y+KCG++ A
Sbjct: 469 -CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQA 527
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSH 339
+ F+ + R++ W+ +++ AQ LF++MKS G++PN +TF+ VL ACSH
Sbjct: 528 RRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS-AGIEPNHVTFVGVLTACSH 586
Query: 340 AGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWG 399
GLVE+G + M+ ++GI P +H + +VDLL RAG+L +A + I+EM +EP VW
Sbjct: 587 VGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWK 646
Query: 400 ALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQG 459
LL+ C+ G+ LA A+ + + +S +VLL + ++
Sbjct: 647 TLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHD 706
Query: 460 IKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
+KK G SW+E +++H F A D H + +IY L + +M
Sbjct: 707 VKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 192/386 (49%), Gaps = 2/386 (0%)
Query: 23 RTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
RT + + A + SRSL +G ++H HI+ + + +L++H+++ Y K + +VF+
Sbjct: 68 RTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
P R+ +++S+I+ ++QN A+ + +ML+ L+PD + K+CA+ S + +G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
LHA +K + ++L+ MY + ++ A VF +P ++++SWS +I G+ QL
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV 262
G + EAL K++L N++ S L+ C + + G QIHG C K+ +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
SL +Y++CG + A + F++++ + WN ++ A + + + +F QM+S G
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
+ P+ I+ +L A + + +G + K +G +++ + L
Sbjct: 368 I-PDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 383 VQVIEEMPMEPTESVWGALLTGCRIH 408
+ E+ W +LT C H
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQH 451
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 157/314 (50%), Gaps = 6/314 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS- 87
L A T +L +G+Q+H++IIK G + + L+ Y+ +F + +
Sbjct: 378 LCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNAD 437
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
+ +W++++++ Q++ P L F+ ML PD + + C +SS+ +G +H
Sbjct: 438 SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 497
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
+LKT + F+ + L+DMYAKCG +G AR +FD M +R+VVSWS +I GY Q G EE
Sbjct: 498 YSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEE 557
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV--ASS 265
AL LFK+ + + N T VL C L+E G +++ +T S S
Sbjct: 558 ALILFKE-MKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQTEHGISPTKEHCSC 615
Query: 266 LISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
++ L ++ G + A + +E+++ ++ +W +L AC + + + E + +
Sbjct: 616 VVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFN 675
Query: 325 PNFITFLCVLYACS 338
LC ++A S
Sbjct: 676 STAHVLLCSMHASS 689
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ N L SL+ G Q+H + +KTGL + + LI+ Y+K + ++F+S
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
+R +WS+LI +AQ+ AL F++M G+ P+ +C+ + + GL
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGL 594
Query: 144 SLHALALKTAYHLDVFV--ASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMI 196
L+A ++T + + S +VD+ A+ G + A DEM +VV W ++
Sbjct: 595 KLYA-TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLL 649
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 7/200 (3%)
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
EAL F + T S++ C +S L G++IH ++ + + +
Sbjct: 49 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHI 108
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+S+Y KCG++ A + F+ + RNL + +++ +Q+ L+ +M V P+
Sbjct: 109 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV-PD 167
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA--TMVDLLGRAGKLQDAVQ 384
F ++ AC+ + V G+ +L + +E S A ++ + R ++ DA +
Sbjct: 168 QFAFGSIIKACASSSDVGLGK---QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 385 VIEEMPMEPTESVWGALLTG 404
V +PM+ S W +++ G
Sbjct: 225 VFYGIPMKDLIS-WSSIIAG 243
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 246/460 (53%), Gaps = 16/460 (3%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQL--PNSSLQVFNSSPHRSATTWSSLISSFAQN 101
+H HI K GL + + + LI+ YS+ ++++F R +W+S++ +
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKA 198
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALAL-KTAYHLDVFV 160
A F +M + L+ + +L A+ C +S A L + +
Sbjct: 199 GELRDARRLFDEMPQRDLISWNTMLDGYAR-CREMSK--------AFELFEKMPERNTVS 249
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMP--HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
S++V Y+K G++ AR +FD+MP +NVV+W+ +I GY + G +EA RL Q +V
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ-MVA 308
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
+ + + S+L C S LL LG +IH +++ S+ +V ++L+ +Y+KCG ++
Sbjct: 309 SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A+ F ++ ++L WN ML H H ELF +M+ G++P+ +TF+ VL +C+
Sbjct: 369 AFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR-EGIRPDKVTFIAVLCSCN 427
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
HAGL+++G YF M+K Y + P +HY +VDLLGR G+L++A++V++ MPMEP +W
Sbjct: 428 HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 487
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
GALL CR+H + ++A V D + + G LLSN ++
Sbjct: 488 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSM 547
Query: 459 GIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
G++K +G S VE + +H F D+SH K+ +IY L L
Sbjct: 548 GVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 193/409 (47%), Gaps = 20/409 (4%)
Query: 23 RTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
R L L +L + QLHA II+ L ++ LI+ S + N +++VFN
Sbjct: 17 RIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQ 76
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
+ +SLI + AQN P+ A F +M R GL D+ P K+C+ S + V
Sbjct: 77 VQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVV 136
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGY--ARNVFDEMPHRNVVSWSGMIYGYV 200
+H K D++V ++L+D Y++CG +G A +F++M R+ VSW+ M+ G V
Sbjct: 137 KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLV 196
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+ GE +A RLF + + + D+ + L R S EL F+ + +
Sbjct: 197 KAGELRDARRLFDE-MPQRDLISWNTMLDGYARCREMSKAFEL--------FEKMPERNT 247
Query: 261 FVASSLISLYSKCGAVEGAYQAFEE--LQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
S+++ YSK G +E A F++ L +N+ W ++ A+ L +QM
Sbjct: 248 VSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA--TMVDLLGRA 376
+ G+K + + +L AC+ +GL+ G ++K+ GS Y ++D+ +
Sbjct: 308 A-SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS---NLGSNAYVLNALLDMYAKC 363
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
G L+ A V ++P + S W +L G +HG + A + R+ +G
Sbjct: 364 GNLKKAFDVFNDIPKKDLVS-WNTMLHGLGVHGHGKEAIELFSRMRREG 411
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 4/171 (2%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A T S L G+++H+ + ++ L + + + L++ Y+K + VFN P +
Sbjct: 322 LAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL 381
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
+W++++ + A++ F +M R G+ PD SC I G+ +
Sbjct: 382 VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID-YFY 440
Query: 149 ALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMI 196
+++ Y L V LVD+ + G + A V MP NVV W ++
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 491
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/436 (31%), Positives = 229/436 (52%), Gaps = 3/436 (0%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G+ +H +K GL+ ++ L+ Y++ S+ +VF+ P R++ W L+
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY-HL 156
+ + F M GL D L K+C + + VG +H ++++ ++
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
++ +S++DMY KC + AR +F+ RNVV W+ +I G+ + EA LF+Q+L
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
E + N TL+++L C + L GK +HG+ + + +S I +Y++CG +
Sbjct: 305 -RESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
+ A F+ + RN+ W++M+ A + + F +MKS V PN +TF+ +L A
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKS-QNVVPNSVTFVSLLSA 422
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
CSH+G V++G FE M +DYG+ P +HYA MVDLLGRAG++ +A I+ MP++P S
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLR 456
WGALL+ CRIH + +LA +A+++ S + VLLSN + +
Sbjct: 483 AWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMG 542
Query: 457 DQGIKKETGLSWVEEG 472
+G +K G S E G
Sbjct: 543 IKGYRKHVGQSATEVG 558
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 216/442 (48%), Gaps = 11/442 (2%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSP--HR 86
L L+ +++L Q+HA +I G E +L L N Y ++ + + FN P R
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 87 SATTWSSLISSFAQNDLPHLA--LDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS 144
+ +W++++S ++++ + L + +M R D L A K+C L + G+
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
+H LA+K D +VA SLV+MYA+ G + A+ VFDE+P RN V W ++ GY++ +
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF-DSSCFVA 263
D E RLF ++ + + ++ TL +++ CG ++GK +HG + SF D S ++
Sbjct: 191 DPEVFRLF-CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
+S+I +Y KC ++ A + FE RN+ MW ++ A+ F+LF QM +
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLR-ESI 308
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
PN T +L +CS G + G+ M ++ GIE + ++ + +D+ R G +Q A
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNV--LLSNXXXX 441
V + MP E W +++ I+G E A ++ Q V + + LLS
Sbjct: 368 TVFDMMP-ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 442 XXXXXXXXXXXKMLRDQGIKKE 463
M RD G+ E
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPE 448
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ L++ + SLR G +H ++I+ G+E + I+ Y++ + VF
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ P R+ +WSS+I++F N L ALD F +M ++P+ + +C+ ++
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 141 VGLS-LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVS-WSGMI 196
G ++ + + +VD+ + GEIG A++ D MP + + S W ++
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 236/469 (50%), Gaps = 3/469 (0%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G LH I+KTG + L LI Y K +S +V + P++ W+ +IS
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ AL F +ML+ G + + SCA L S +G S+H L+ Y LD
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+SL+ MYAKCG + + +F+ M R++VSW+ +I GY Q + +AL LF+++
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+ V+ FT+ S+L+ C ++ L +GK IH ++ V ++L+ +YSKCG +E
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + F+ + +++ W ++ H + E++ + G++PN + FL VL +C
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLH-SGMEPNHVIFLAVLSSC 559
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
SH G+V++G F M +D+G+EP +H A +VDLL RA +++DA + +E P+ V
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDV 619
Query: 398 WGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRD 457
G +L CR +G TE+ + + + E +G V L + +R
Sbjct: 620 LGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRS 679
Query: 458 QGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAG 506
G+KK G S +E + TF SH+ + + L+ L EM + G
Sbjct: 680 LGLKKLPGWSKIEMNGKTTTFFMNHTSHSD--DTVSLLKLLSREMMQFG 726
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 186/382 (48%), Gaps = 3/382 (0%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
LH + G + + + ++N Y K + +F+ R +W+++IS +A
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
L +M GL PD + + + +G LH +KT + +D+ + ++
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+ MY KCG+ + V + +P+++VV W+ MI G ++LG E+AL +F ++L + +
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML-QSGSDL 344
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
+ ++SV+ C +LG +HG+ + + +SLI++Y+KCG ++ + F
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
E + R+L WNA++ AQ+ + LFE+MK + + T + +L ACS AG +
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGAL 464
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
G+ ++ + + I P S +VD+ + G L+ A + + + + S WG L+
Sbjct: 465 PVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIA 522
Query: 404 GCRIHGDTELASYVADRVFEQG 425
G HG ++A + G
Sbjct: 523 GYGFHGKGDIALEIYSEFLHSG 544
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 173/376 (46%), Gaps = 7/376 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A + L GL +H ++ G + +S L+N Y+K L + +VF R
Sbjct: 53 LKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDV 112
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
W+++I +++ + A +M G+ P L ++ + LH
Sbjct: 113 VHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDF 169
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
A+ + D+ V +S++++Y KC +G A+++FD+M R++VSW+ MI GY +G E
Sbjct: 170 AVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEI 229
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
L+L + + + + + T + L V G LE+G+ +H KT FD + ++LI+
Sbjct: 230 LKLLYR-MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALIT 288
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
+Y KCG E +Y+ E + +++ W M+ + + +F +M G +
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ-SGSDLSSE 347
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
V+ +C+ G + G + + +G + +++ + + G L ++ + E
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFER 406
Query: 389 MPMEPTESVWGALLTG 404
M S W A+++G
Sbjct: 407 MNERDLVS-WNAIISG 421
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 161/321 (50%), Gaps = 11/321 (3%)
Query: 107 ALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVD 166
L F ML LLPD P+ K+CA+L + GLS+H L + D +++SSLV+
Sbjct: 30 VLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVN 89
Query: 167 MYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF 226
+YAK G + +AR VF+EM R+VV W+ MI Y + G EA L ++ + G+
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ---GIKPG 146
Query: 227 TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
++ + + G + +L + +H + FD V +S+++LY KC V A F+++
Sbjct: 147 PVTLLEMLSGVLEITQL-QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM 205
Query: 287 QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG 346
+ R++ WN M+ A + + +L +M+ G++P+ TF L +E G
Sbjct: 206 EQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 347 QH-YFELMKKDYGIEPGSQHYAT-MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+ + +++K + ++ H T ++ + + GK + + +V+E +P + W +++G
Sbjct: 265 RMLHCQIVKTGFDVD---MHLKTALITMYLKCGKEEASYRVLETIPNKDV-VCWTVMISG 320
Query: 405 CRIHGDTELASYVADRVFEQG 425
G E A V + + G
Sbjct: 321 LMRLGRAEKALIVFSEMLQSG 341
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 236/453 (52%), Gaps = 5/453 (1%)
Query: 20 GNYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQV 79
GN T ++A T +L +G H ++K+G+E L L++ Y K +++ +V
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
FN H W+++I + N + AL F++M + + P+ + + C + ++
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
+G S+H L++K D VA++LV MYAKC + A+ VF+ +++V+W+ +I G+
Sbjct: 360 ELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF--D 257
Q G EAL LF + + E V N T++S+ C + L +G +H + K F
Sbjct: 419 SQNGSIHEALFLFHR-MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLAS 477
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
SS V ++L+ Y+KCG + A F+ ++ +N W+AM+ + T + ELFE+M
Sbjct: 478 SSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEM 537
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
KPN TF +L AC H G+V +G+ YF M KDY P ++HY MVD+L RAG
Sbjct: 538 LK-KQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAG 596
Query: 378 KLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSN 437
+L+ A+ +IE+MP++P +GA L GC +H +L V ++ + + VL+SN
Sbjct: 597 ELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSN 656
Query: 438 XXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
+++ +G+ K G S +E
Sbjct: 657 LYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 193/386 (50%), Gaps = 10/386 (2%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKT-GLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS 87
L A T + L G ++H ++K + + L L++ Y+K S+ +VFN R+
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
W+S+I+ + +NDL L F +M +L +++ T +C LS++H G H
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
+K+ L + +SL+DMY KCG+I AR VF+E H ++V W+ MI GY G E
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 326
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS-FDSSCFVASSL 266
AL LF+++ E + N T++SVL CG LELG+ +HG K +D++ VA++L
Sbjct: 327 ALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANAL 383
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+ +Y+KC A FE +++ WN+++ +Q+ + LF +M S V PN
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS-ESVTPN 442
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYAT-MVDLLGRAGKLQDAVQV 385
+T + AC+ G + G K + S H T ++D + G Q A ++
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RL 501
Query: 386 IEEMPMEPTESVWGALLTGCRIHGDT 411
I + E W A++ G GDT
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDT 527
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 189/406 (46%), Gaps = 19/406 (4%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS 92
T+ SLR Q H + GL ++ L++ Y + VF+ P W
Sbjct: 55 TNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWK 111
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
++ + N + + +++ G DD + A K+C L + G +H +K
Sbjct: 112 VMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV 171
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
D V + L+DMYAKCGEI A VF+++ RNVV W+ MI GYV+ EE L LF
Sbjct: 172 P-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
+ + E +V N++T +++ C + L GK HG K+ + S + +SL+ +Y K
Sbjct: 231 NR-MRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 273 CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLC 332
CG + A + F E +L MW AM++ + N LF++MK V +KPN +T
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV-EIKPNCVTIAS 348
Query: 333 VLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYAT-----MVDLLGRAGKLQDAVQVIE 387
VL C GL+E EL + +G+ + T +V + + + +DA V
Sbjct: 349 VLSGC---GLIEN----LELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVF- 400
Query: 388 EMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNV 433
EM E W ++++G +G A ++ R+ + +G+ V
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 236/462 (51%), Gaps = 6/462 (1%)
Query: 38 LRRGLQLHAHIIKTGLE-TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
+R G +H ++ L+ LS L+ Y++ + V R+ W+SLIS
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
+A + AL FRQM+ + PD L ++ +C + +G +H ++T
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS- 437
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
D FV +SL+DMY+K G + A VF+++ HR+VV+W+ M+ G+ Q G EA+ LF +
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF-DYM 496
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
+ +N+ T +V++ C + LE GK +H + F ++LI +Y+KCG +
Sbjct: 497 YHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDL 555
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
A F + R++ W++M+ A H F QM G KPN + F+ VL A
Sbjct: 556 NAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE-SGTKPNEVVFMNVLSA 614
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
C H+G VE+G++YF LMK +G+ P S+H+A +DLL R+G L++A + I+EMP S
Sbjct: 615 CGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADAS 673
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLR 456
VWG+L+ GCRIH ++ + + + + +G LLSN ++
Sbjct: 674 VWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMK 733
Query: 457 DQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
+KK G S +E +V F AG+ + +T EIY L L
Sbjct: 734 SSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 188/359 (52%), Gaps = 18/359 (5%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
LR +H I + + L + L+ YSK SS ++F ++A +W+++ISS
Sbjct: 218 LRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS 277
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ + + AL F +M++ G+ P+ L + SC + I G S+H A++ LD
Sbjct: 278 YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR--ELD 335
Query: 158 VFVAS---SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
S +LV++YA+CG++ V + RN+V+W+ +I Y G +AL LF+Q
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG 274
+V + + + FTL+S + C + L+ LGKQIHG +T S FV +SLI +YSK G
Sbjct: 396 -MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSG 453
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
+V+ A F +++ R++ WN+ML +Q+ ++ LF+ M ++ N +TFL V+
Sbjct: 454 SVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH-SYLEMNEVTFLAVI 512
Query: 335 YACSHAGLVEKGQ--HYFELMK--KDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
ACS G +EKG+ H+ ++ KD + ++D+ + G L A V M
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGLKDLFTD------TALIDMYAKCGDLNAAETVFRAM 565
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 195/387 (50%), Gaps = 8/387 (2%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G ++H IIK G++ ++ L+ Y +T + + +VF+ P R WS+L+SS
Sbjct: 117 LSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS 176
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+N AL F+ M+ G+ PD + + + CA L + + S+H + + LD
Sbjct: 177 CLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ +SL+ MY+KCG++ + +F+++ +N VSW+ MI Y + E+ALR F + ++
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSE-MI 295
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS-SLISLYSKCGAV 276
+ + N TL SVL CG L+ GK +HG+ + D + S +L+ LY++CG +
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKL 355
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
+ RN+ WN+++ A + LF QM + +KP+ T + A
Sbjct: 356 SDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT-QRIKPDAFTLASSISA 414
Query: 337 CSHAGLVEKG-QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
C +AGLV G Q + +++ D E +++D+ ++G + A V ++
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQN---SLIDMYSKSGSVDSASTVFNQIKHRSVV 471
Query: 396 SVWGALLTGCRIHGDTELASYVADRVF 422
+ W ++L G +G++ A + D ++
Sbjct: 472 T-WNSMLCGFSQNGNSVEAISLFDYMY 497
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 182/355 (51%), Gaps = 10/355 (2%)
Query: 37 SLRRGLQLHAHIIKTG-LETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
SLR QLHAH++ TG L PL LI Y+ P+SS VF + P+ + + LI
Sbjct: 13 SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI 72
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCA-ALSSIHVGLSLHALALKTAY 154
L A+D + +++ + P+ ++CA + + VG +H +K
Sbjct: 73 KCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGV 132
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
D + +SL+ MY + G + A VFD MP R++V+WS ++ ++ GE +ALR+FK
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFK- 191
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG 274
+V++ V + T+ SV+ C L + + +HG + FD + +SL+++YSKCG
Sbjct: 192 CMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCG 251
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
+ + + FE++ +N W AM+ + + + + F +M G++PN +T VL
Sbjct: 252 DLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK-SGIEPNLVTLYSVL 310
Query: 335 YACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYA-TMVDLLGRAGKLQDAVQVI 386
+C GL+ +G+ H F + ++ ++P + + +V+L GKL D V+
Sbjct: 311 SSCGLIGLIREGKSVHGFAVRRE---LDPNYESLSLALVELYAECGKLSDCETVL 362
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 232/466 (49%), Gaps = 3/466 (0%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L RG ++H +K G E ++ L++ Y K + +VF P +S W+S+I
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ ++ +M+ G P L + +C+ ++ G +H +++ + D
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
++V SL+D+Y KCGE A VF + SW+ MI Y+ +G +A+ ++ Q +V
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQ-MV 402
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
V + T +SVL C LE GKQIH ++ ++ + S+L+ +YSKCG +
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEK 462
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A++ F + +++ W M+ A H F++M+ G+KP+ +T L VL AC
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKF-GLKPDGVTLLAVLSAC 521
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP-MEPTES 396
HAGL+++G +F M+ YGIEP +HY+ M+D+LGRAG+L +A ++I++ P
Sbjct: 522 GHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAE 581
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLR 456
+ L + C +H + L +A + E + ++L N ++
Sbjct: 582 LLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMK 641
Query: 457 DQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
+ G++K+ G SW+E ++V F A DRSH + +Y L L M
Sbjct: 642 EMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 204/394 (51%), Gaps = 4/394 (1%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +H ++K+G +++ L+ Y+K L +SLQVF+ P R +W+++IS F Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
+ AL+ F +M G P+ L A +C+ L + G +H +K + LD +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
S+LVDMY KC + AR VF +MP +++V+W+ MI GYV G+ + + + ++++ E
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII-EG 304
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+ TL+S+L C S L GK IHG+ ++ ++ +V SLI LY KCG A
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
F + Q WN M+ + + + E+++QM SV GVKP+ +TF VL ACS
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQL 423
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
+EKG+ L + +E + ++D+ + G ++A ++ +P + S W
Sbjct: 424 AALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTV 481
Query: 401 LLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
+++ HG A Y D + + G G+ +L
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLL 515
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 196/395 (49%), Gaps = 10/395 (2%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSAT-TWSS 93
++SLRR +H I+ GL +L LIN Y + S+ VF + RS W+S
Sbjct: 17 TKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNS 76
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGL-LPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
L+S +++N + H L+ F+++L + +PD P K+ AL +G +H L +K+
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
Y DV VASSLV MYAK + VFDEMP R+V SW+ +I + Q GE E+AL LF
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 213 KQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
++ E G N +L+ + C LE GK+IH C K F+ +V S+L+ +Y
Sbjct: 197 GRM---ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
KC +E A + F+++ ++L WN+M+ + E+ +M + G +P+ T
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM-IIEGTRPSQTTL 312
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
+L ACS + + G+ + + + +++DL + G+ A V +
Sbjct: 313 TSILMACSRSRNLLHGKFIHGYVIRSV-VNADIYVNCSLIDLYFKCGEANLAETVFSKTQ 371
Query: 391 MEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
+ ES W +++ G+ A V D++ G
Sbjct: 372 KDVAES-WNVMISSYISVGNWFKAVEVYDQMVSVG 405
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 144/287 (50%), Gaps = 10/287 (3%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L+A + SR+L G +H ++I++ + ++ LI+ Y K N + VF+ +
Sbjct: 311 TLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
A +W+ +ISS+ A++ + QM+ +G+ PD + +C+ L+++ G
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK 430
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H ++ D + S+L+DMY+KCG A +F+ +P ++VVSW+ MI Y G
Sbjct: 431 QIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHG 490
Query: 204 EDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
+ EAL F ++ + G+ + TL +VL CG + L++ G + ++ +
Sbjct: 491 QPREALYQFDEM---QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ-MRSKYGIEPI 546
Query: 262 VA--SSLISLYSKCGAVEGAYQAFEEL--QVRNLGMWNAMLIACAQH 304
+ S +I + + G + AY+ ++ N + + + AC H
Sbjct: 547 IEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 593
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 226/436 (51%), Gaps = 6/436 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
+R G Q+H + K G + + L++FY ++ +VF P R +W+ +I+
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
F + L ALD F +M + P+ S + + +G +H L LK A +
Sbjct: 182 FTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ ++L+DMY KC ++ A VF E+ ++ VSW+ MI G V +EA+ LF +
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+ + L+SVL C + ++ G+ +H + + ++++ +Y+KCG +E
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + F ++ +N+ WNA+L A H H + FE+M + G KPN +TFL L AC
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL-GFKPNLVTFLAALNAC 417
Query: 338 SHAGLVEKGQHYFELMK-KDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
H GLV++G+ YF MK ++Y + P +HY M+DLL RAG L +A+++++ MP++P
Sbjct: 418 CHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVR 477
Query: 397 VWGALLTGCRIHGD-TELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKML 455
+ GA+L+ C+ G EL + D + SG+ VLLSN +++
Sbjct: 478 ICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLM 537
Query: 456 RDQGIKKETGLSWVEE 471
+ +GI K G S++E+
Sbjct: 538 KVKGISKVPGSSYIEK 553
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 188/380 (49%), Gaps = 8/380 (2%)
Query: 32 LTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQ--LPNSSLQVFNSSPHRSAT 89
++ SLR Q+ +I L L+ + ++ F K+ SS+ + + S+
Sbjct: 13 ISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSF 72
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
++++L+SS+A D P + + ++ + G PD P K+C S I G +H +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEAL 209
K ++ D++V +SLV Y CGE A VF EMP R+VVSW+G+I G+ + G +EAL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
F ++ VE ++ T VL G L LGK IHG K + S ++LI +
Sbjct: 193 DTFSKMDVEPNLA----TYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 270 YSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
Y KC + A + F EL+ ++ WN+M+ + +LF M++ G+KP+
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 330 FLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
VL AC+ G V+ G+ E + GI+ + +VD+ + G ++ A+++ +
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 390 PMEPTESVWGALLTGCRIHG 409
+ + W ALL G IHG
Sbjct: 368 RSKNVFT-WNALLGGLAIHG 386
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 201/393 (51%), Gaps = 2/393 (0%)
Query: 118 GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYA 177
GL + + C G +HA + L+ ++ L+ +YA G++ A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 178 RNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA 237
+F + R+++ W+ MI GYVQ G ++E L ++ + + + + +T +SV R C A
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD-MRQNRIVPDQYTFASVFRACSA 221
Query: 238 STLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAM 297
LE GK+ H K S+ V S+L+ +Y KC + ++ F++L RN+ W ++
Sbjct: 222 LDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSL 281
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY 357
+ H + + FE+MK G +PN +TFL VL AC+H GLV+KG +F MK+DY
Sbjct: 282 ISGYGYHGKVSEVLKCFEKMKE-EGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 358 GIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYV 417
GIEP QHYA MVD LGRAG+LQ+A + + + P + VWG+LL CRIHG+ +L
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELA 400
Query: 418 ADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHT 477
A + E + G V+ +N + + + G+KK+ G S +E VH
Sbjct: 401 ATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHR 460
Query: 478 FAAGDRSHAKTVEIYNKLEELGDEMAKAGYVAD 510
F D SH + +IY K+ E+ Y D
Sbjct: 461 FMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 5/272 (1%)
Query: 40 RGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
+G ++HA + G L L+ Y+ + ++ +F S R W+++IS +
Sbjct: 126 KGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYV 185
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
Q L L + M + ++PD + + ++C+AL + G HA+ +K ++
Sbjct: 186 QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII 245
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
V S+LVDMY KC VFD++ RNV++W+ +I GY G+ E L+ F++ + EE
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEK-MKEE 304
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF--DSSCFVASSLISLYSKCGAVE 277
N T VL C L++ G + H + K + + ++++ + G ++
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQ 363
Query: 278 GAYQAFEELQVR-NLGMWNAMLIACAQHAHTN 308
AY+ + + + +W ++L AC H +
Sbjct: 364 EAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK 395
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 240/501 (47%), Gaps = 38/501 (7%)
Query: 34 HSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSS 93
H +L+ Q H ++I TGL L I S + VF P + ++
Sbjct: 24 HGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNT 83
Query: 94 LISSFAQNDLPH---LALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALAL 150
+I + + D P+ +A+ +R++ + PD P K +S + G +H +
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEM-------------------------- 184
+ V V + L+ MY CG +G AR +FDEM
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARS 203
Query: 185 -----P--HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA 237
P RN VSW+ +I GY + G EA+ +F+++L+E +V ++ TL +VL C
Sbjct: 204 LLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-NVEPDEVTLLAVLSACAD 262
Query: 238 STLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAM 297
LELG++I + + + + +++I +Y+K G + A FE + RN+ W +
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTI 322
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY 357
+ A H H +F +M GV+PN +TF+ +L ACSH G V+ G+ F M+ Y
Sbjct: 323 IAGLATHGHGAEALAMFNRMVK-AGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKY 381
Query: 358 GIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYV 417
GI P +HY M+DLLGRAGKL++A +VI+ MP + ++WG+LL +H D EL
Sbjct: 382 GIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERA 441
Query: 418 ADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHT 477
+ + +SG +LL+N M++ G+KK G S +E NRV+
Sbjct: 442 LSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYK 501
Query: 478 FAAGDRSHAKTVEIYNKLEEL 498
F +GD +H + I+ L+E+
Sbjct: 502 FISGDLTHPQVERIHEILQEM 522
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 265/510 (51%), Gaps = 38/510 (7%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L ++ R + G ++H + +K GLE +S+ L+ Y+ + +VF+ P R
Sbjct: 53 LKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDV 112
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLP-DDHILPTAAKSCAALSSIHVGLSLHA 147
+W+ LISS+ N A+ F++M + L D+ + + +C+AL ++ +G ++
Sbjct: 113 VSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYR 172
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
+ T + + V + ++LVDM+ KCG + AR VFD M +NV W+ M++GYV G +E
Sbjct: 173 FVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDE 231
Query: 208 ALRLFKQVLVEEDV----------------------------GV--NDFTLSSVLRVCGA 237
A LF++ V++ V G+ ++F L S+L C
Sbjct: 232 ARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQ 291
Query: 238 STLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAM 297
+ LE GK IHG+ + V ++L+ +Y+KCG +E A + F E++ R+ W ++
Sbjct: 292 TGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSL 351
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY 357
+ A + + R +L+ +M++VG V+ + ITF+ VL AC+H G V +G+ F M + +
Sbjct: 352 IYGLAMNGMSGRALDLYYEMENVG-VRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERH 410
Query: 358 GIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES---VWGALLTGCRIHGDTELA 414
++P S+H + ++DLL RAG L +A ++I++M E E+ V+ +LL+ R +G+ ++A
Sbjct: 411 NVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIA 470
Query: 415 SYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNR 474
VA+++ + S + LL++ + ++D GI+K G S +E
Sbjct: 471 ERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGV 530
Query: 475 VHTFAAGDR--SHAKTVEIYNKLEELGDEM 502
H F GD SH K EI + L + + M
Sbjct: 531 GHEFIVGDDLLSHPKMDEINSMLHQTTNLM 560
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 182/379 (48%), Gaps = 38/379 (10%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
S ++ ++ S A L F ++ GL PD+ LP KS L + G +H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
A+K D +V++SL+ MYA G+I VFDEMP R+VVSW+G+I YV G E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
+A+ +FK++ E ++ ++ T+ S L C A LE+G++I+ + T F+ S + ++L
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNAL 188
Query: 267 ISLYSKCGAVEGAYQAFEELQ-------------------------------VRNLGMWN 295
+ ++ KCG ++ A F+ ++ V+++ +W
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWT 248
Query: 296 AMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKK 355
AM+ Q + ELF M++ G++P+ + +L C+ G +E+G+ + +
Sbjct: 249 AMMNGYVQFNRFDEALELFRCMQT-AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 356 DYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELAS 415
+ + +VD+ + G ++ A++V E+ T S W +L+ G ++G ++
Sbjct: 308 NR-VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS-WTSLIYGLAMNG---MSG 362
Query: 416 YVADRVFEQGHVSSGLNVL 434
D +E +V L+ +
Sbjct: 363 RALDLYYEMENVGVRLDAI 381
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 216/404 (53%), Gaps = 45/404 (11%)
Query: 206 EEALRLFKQVLVEEDVGVND---------FTLSSVLRVCGASTLLELGKQIHGWCFKTSF 256
EE +RL ++ L ++ + + D F L + C LE K++H ++ F
Sbjct: 210 EEVMRLCQRRLYKDAIELLDKGAMPDRECFVL--LFESCANLKSLEHSKKVHDHFLQSKF 267
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQ 316
+ + +IS++ +C ++ A + F+ + +++ W+ M+ A + + + LFE+
Sbjct: 268 RGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEE 327
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
M + G+KPN TFL V AC+ G +E+ +F+ MK ++GI P ++HY ++ +LG+
Sbjct: 328 M-TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKC 386
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
G L +A Q I ++P EPT W A+ R+HGD +L Y+ + + + + +N + +
Sbjct: 387 GHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPT 446
Query: 437 NXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLE 496
KET + V +R+ F + + Y +
Sbjct: 447 PPPKSF-------------------KETNM--VTSKSRILEF--------RNLTFYK--D 475
Query: 497 ELGDEMAKAG--YVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLITFPQERPIRVMKN 554
E + AK G YV DT FVL ++ E K Q + YHSERLAIA+G+I P + + ++KN
Sbjct: 476 EAKEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKN 535
Query: 555 LRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
LRVCGDCH IK +SKI GRVLIVRDN RFH F+DGKC+CGDYW
Sbjct: 536 LRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 15/193 (7%)
Query: 113 QMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCG 172
++L G +PD +SCA L S+ +H L++ + D + + ++ M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 173 EIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVL 232
I A+ VFD M +++ SW M+ Y G ++AL LF++ + + + N+ T +V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEE-MTKHGLKPNEETFLTVF 344
Query: 233 RVCGASTLLELG-------KQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEE 285
C +E K HG KT ++ + KCG + A Q +
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEH------YLGVLGVLGKCGHLVEAEQYIRD 398
Query: 286 LQVRNLG-MWNAM 297
L W AM
Sbjct: 399 LPFEPTADFWEAM 411
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 26 CNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPH 85
C +L +L HS+ ++H H +++ P L++ +I+ + + + +VF+
Sbjct: 246 CANLKSLEHSK------KVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVD 299
Query: 86 RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL-- 143
+ +W ++ +++ N + AL F +M + GL P++ T +CA + I
Sbjct: 300 KDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLH 359
Query: 144 -----SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+ H ++ KT ++L V + + KCG + A ++P + +
Sbjct: 360 FDSMKNEHGISPKTEHYLGV------LGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 199 YVQLGEDEEALRLFKQVLVEED 220
Y +L D + ++++V+ D
Sbjct: 414 YARLHGDIDLEDYMEELMVDVD 435
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/510 (29%), Positives = 254/510 (49%), Gaps = 78/510 (15%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNS---SLQVFNSSPHRSATTWS 92
+++R Q+HA ++ GL + + LI + + +P + + ++F+ P + +
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELI-YSASLSVPGALKYAHKLFDEIPKPDVSICN 81
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
++ AQ+ P + + +M + G+ PD + K+C+ L G + H ++
Sbjct: 82 HVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH 141
Query: 153 AYHLDVFVASSLVDMYAKCGEI-----------------------GYARN--------VF 181
+ L+ +V ++L+ +A CG++ GYA+ +F
Sbjct: 142 GFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 182 DEMPHRN-------------------------------VVSWSGMIYGYVQLGEDEEALR 210
DEMP+++ VV+W+ MI GYV G +EAL
Sbjct: 202 DEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALG 261
Query: 211 LFKQVLVEEDVG--VNDFTLSSVLRVCGASTLLELGKQIHGWCFKT-SFDSSCFVAS--- 264
+FK++ D G + T+ S+L C LE GK++H + +T S SS +V +
Sbjct: 262 IFKEM---RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW 318
Query: 265 -SLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
+LI +Y+KCG+++ A + F ++ R+L WN +++ A H H + E+FE+M+ + V
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLK-V 376
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
PN +TF+ V+ ACSH+G V++G+ YF LM+ Y IEP +HY MVD+LGRAG+L++A
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF 436
Query: 384 QVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXX 443
+E M +EP VW LL C+I+G+ EL Y +++ SG VLLSN
Sbjct: 437 MFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTG 496
Query: 444 XXXXXXXXXKMLRDQGIKKETGLSWVEEGN 473
KM D +KK TG+S +EE +
Sbjct: 497 QWDGVQKVRKMFDDTRVKKPTGVSLIEEDD 526
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPL-----LSHHLINFYSKTQLPNSSLQ 78
TI + L A L G +LH +I++T + + + + LI+ Y+K + +++
Sbjct: 277 TILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE 336
Query: 79 VFNSSPHRSATTWSSLISSFAQNDLPHL--ALDFFRQMLRIGLLPDDHILPTAAKSCAAL 136
VF R +TW++LI A L H +++ F +M R+ + P++ +C+
Sbjct: 337 VFRGVKDRDLSTWNTLIVGLA---LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHS 393
Query: 137 SSIHVGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWS 193
+ G +L ++ Y+++ + +VDM + G++ A + M N + W
Sbjct: 394 GRVDEGRKYFSL-MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWR 452
Query: 194 GM-----IYGYVQLGE 204
+ IYG V+LG+
Sbjct: 453 TLLGACKIYGNVELGK 468
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 245/443 (55%), Gaps = 15/443 (3%)
Query: 32 LTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSK-TQLPNSSLQVFNSSPHRSATT 90
L HS + + LHAH+++T L + +LS L+ YSK L +SL VF P+R+ +
Sbjct: 41 LHHSPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFS 100
Query: 91 WSSLISSFAQNDLPHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSLHALA 149
W+ +I F+++ ++D F +M R + PDD LP ++C+A G +H L
Sbjct: 101 WNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLC 160
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEAL 209
LK + +FV+S+LV MY G++ +AR +FD+MP R+ V ++ M GYVQ GE L
Sbjct: 161 LKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGL 220
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRV-----CGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
+F++ +G + F L SV+ V CG L+ GK +HGWC + + +
Sbjct: 221 AMFRE------MGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGN 274
Query: 265 SLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
++ +Y KC ++ A+ F + R++ W+++++ +F+LF++M G++
Sbjct: 275 AITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLK-EGIE 333
Query: 325 PNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQ 384
PN +TFL VL AC+H GLVEK YF LM ++Y I P +HYA++ D + RAG L++A +
Sbjct: 334 PNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEK 392
Query: 385 VIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXX 444
+E+MP++P E+V GA+L+GC+++G+ E+ VA + + + V L+
Sbjct: 393 FLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGR 452
Query: 445 XXXXXXXXKMLRDQGIKKETGLS 467
+ ++++ I K G S
Sbjct: 453 FDEAESLRQWMKEKQISKVPGCS 475
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 148/333 (44%), Gaps = 14/333 (4%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A + SR + G +H +K G + +S L+ Y + ++F+ P R +
Sbjct: 141 LRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDS 200
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
++++ + Q L L FR+M G D ++ + +C L ++ G S+H
Sbjct: 201 VLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGW 260
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
++ L + + +++ DMY KC + YA VF M R+V+SWS +I GY G+ +
Sbjct: 261 CIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMS 320
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA----- 263
+LF ++L +E + N T VL C L+E W + V
Sbjct: 321 FKLFDEML-KEGIEPNAVTFLGVLSACAHGGLVE-----KSWLYFRLMQEYNIVPELKHY 374
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+S+ S+ G +E A + E++ V+ + + A+L C + + + ++ +
Sbjct: 375 ASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKP 434
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKK 355
K ++ L LY S AG ++ + + MK+
Sbjct: 435 RKASYYVTLAGLY--SAAGRFDEAESLRQWMKE 465
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 245/477 (51%), Gaps = 42/477 (8%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
R G L AHI K G + LI+FYS T + +VF+ P R W++++S+
Sbjct: 886 RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSA- 944
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
+R++L + S ++LA + + +
Sbjct: 945 ------------YRRVLDMD-------------------------SANSLANQMSEKNEA 967
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
++ L++ Y G + A ++F++MP ++++SW+ MI GY Q EA+ +F +++ E
Sbjct: 968 -TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMM-E 1025
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
E + ++ T+S+V+ C +LE+GK++H + + F ++ S+L+ +YSKCG++E
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLER 1085
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A F L +NL WN+++ A H ++F +M+ + VKPN +TF+ V AC+
Sbjct: 1086 ALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME-MESVKPNAVTFVSVFTACT 1144
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
HAGLV++G+ + M DY I +HY MV L +AG + +A+++I M EP +W
Sbjct: 1145 HAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIW 1204
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
GALL GCRIH + +A +++ ++SG LL + +R+
Sbjct: 1205 GALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMREL 1264
Query: 459 GIKKE-TGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFV 514
GI+K G S + R H FAA D+SH+ + E+ L+E+ D+M AGYV +T V
Sbjct: 1265 GIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 114/284 (40%), Gaps = 16/284 (5%)
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
A +KT+ + D + + + + A + +M NV ++ + G+V
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 853
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
+L L+ ++L + V + +T SS+++ ++ Q H W F F + ++L
Sbjct: 854 RSLELYVRML-RDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVK--IQTTL 910
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
I YS G + A + F+E+ R+ W M+ A + + L QM + N
Sbjct: 911 IDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMS-----EKN 965
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
T C++ G +E+ + F M I + TM+ + + ++A+ V
Sbjct: 966 EATSNCLINGYMGLGNLEQAESLFNQMPVKDIIS-----WTTMIKGYSQNKRYREAIAVF 1020
Query: 387 EEMPME---PTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
+M E P E +++ C G E+ V + G V
Sbjct: 1021 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV 1064
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 244/474 (51%), Gaps = 32/474 (6%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+I+ Y+++ + +L++F+ P R+ +W+S++ + Q A++ F +M R ++
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSW 205
Query: 123 DHILPTAAKS-----------CAALSSIHVGLSLHALALKTAYH---------------L 156
++ AK+ C +I +S +A+ A +
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERNI---ISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
D ++++ + + E+ A +FD MP +NV+SW+ MI GYV+ E+EEAL +F ++L
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
+ V N T S+L C L G+QIH K+ + V S+L+++YSK G +
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Query: 277 EGAYQAFEELQV--RNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
A + F+ V R+L WN+M+ A H H E++ QM+ G KP+ +T+L +L
Sbjct: 383 IAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK-HGFKPSAVTYLNLL 441
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
+ACSHAGLVEKG +F+ + +D + +HY +VDL GRAG+L+D I +
Sbjct: 442 FACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLS 501
Query: 395 ESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKM 454
S +GA+L+ C +H + +A V +V E G +G VL+SN
Sbjct: 502 RSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMK 561
Query: 455 LRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYV 508
++++G+KK+ G SWV+ G + H F GD+SH + + + L +L ++M K V
Sbjct: 562 MKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNV 615
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 143/302 (47%), Gaps = 21/302 (6%)
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+ K G+I AR +FD +P R+VV+W+ +I GY++LG+ EA LF +V ++V
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
+S LR S L + + + F+ + + +++I Y++ G ++ A + F
Sbjct: 112 WTAMVSGYLR----SKQLSIAEML----FQEMPERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
+E+ RN+ WN+M+ A Q + LFE+M + + +++ ++ + G V
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP-----RRDVVSWTAMVDGLAKNGKV 218
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
++ + F+ M + I + M+ + ++ +A Q+ + MP E + W ++T
Sbjct: 219 DEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMIT 272
Query: 404 GCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKE 463
G + + A + DR+ E+ +S +++ KMLRD +K
Sbjct: 273 GFIRNREMNKACGLFDRMPEKNVIS--WTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 464 TG 465
G
Sbjct: 331 VG 332
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 143/310 (46%), Gaps = 49/310 (15%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
++F+ P R TW+ +I+ + + A + F + + +++ A L
Sbjct: 67 KLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR-----VDSRKNVVTWTAMVSGYLR 121
Query: 138 SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIY 197
S LS+ + + +V ++++D YA+ G I A +FDEMP RN+VSW+ M+
Sbjct: 122 SKQ--LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 198 GYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
VQ G +EA+ LF++ + DV + ++++ + ++ +++ F +
Sbjct: 180 ALVQRGRIDEAMNLFER-MPRRDV----VSWTAMVDGLAKNGKVDEARRL----FDCMPE 230
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
+ +++I+ Y++ ++ A Q F+ + R+ WN M+ ++ N+ LF++M
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 318 --KSV-----------------------------GGVKPNFITFLCVLYACSH-AGLVEK 345
K+V G VKPN T++ +L ACS AGLVE
Sbjct: 291 PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE- 349
Query: 346 GQHYFELMKK 355
GQ +L+ K
Sbjct: 350 GQQIHQLISK 359
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 151/509 (29%), Positives = 242/509 (47%), Gaps = 65/509 (12%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSK-------------T 70
T+ L A +L+ G Q+HA I+ G+E ++ L+N Y+K
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 71 QLP------------------NSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFR 112
+ P N S +F+ +R W+S+IS + N++ AL F
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 113 QMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCG 172
+M R D L +C L + G +H A K D+ VAS+L+DMY+KCG
Sbjct: 309 EM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 173 -------------------------------EIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
I A+ VF+ + +++++SW+ M G+ Q
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
G E L F Q + + D+ ++ +LSSV+ C + + LELG+Q+ DS
Sbjct: 428 NGCTVETLEYFHQ-MHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV 486
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
V+SSLI LY KCG VE + F+ + + WN+M+ A + +LF++M SV
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM-SVA 545
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
G++P ITF+ VL AC++ GLVE+G+ FE MK D+G P +H++ MVDLL RAG +++
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 382 AVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXX 441
A+ ++EEMP + S+W ++L GC +G + A+++ E +S V LS
Sbjct: 606 AINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFAT 665
Query: 442 XXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
K++R+ + K G SW +
Sbjct: 666 SGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 172/394 (43%), Gaps = 70/394 (17%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
++FN+ P + T +SL+ + N AL F+++ D L T K+CA L
Sbjct: 145 RLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELE 201
Query: 138 SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEI----------------------- 174
++ G +HA L D + SSLV++YAKCG++
Sbjct: 202 ALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALIS 261
Query: 175 GYA--------RNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF 226
GYA R +FD +R V+ W+ MI GY+ EAL LF + + + +
Sbjct: 262 GYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE--MRNETREDSR 319
Query: 227 TLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA----------- 275
TL++V+ C LE GKQ+H K VAS+L+ +YSKCG+
Sbjct: 320 TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV 379
Query: 276 --------------------VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
++ A + FE ++ ++L WN+M +Q+ T T E F
Sbjct: 380 ESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFH 439
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGR 375
QM + + + ++ V+ AC+ +E G+ F G++ ++++DL +
Sbjct: 440 QMHKL-DLPTDEVSLSSVISACASISSLELGEQVFA-RATIVGLDSDQVVSSSLIDLYCK 497
Query: 376 AGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
G ++ +V + M ++ E W ++++G +G
Sbjct: 498 CGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 136/349 (38%), Gaps = 93/349 (26%)
Query: 131 KSCAALSSIHVGLSLHALALKTAYHLD-VFVASSLVDMYAKCGEIGYARNVFDEMPHRNV 189
+SC++ + + + L LK + V VA+ L+ MY++ G++G ARN+FDEMP RN
Sbjct: 34 QSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNY 93
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQV------------------------------LVEE 219
SW+ MI GY+ GE +LR F + + E+
Sbjct: 94 FSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEK 153
Query: 220 DV----------------------------GVNDFTLSSVLRVCGASTLLELGKQIHGWC 251
DV + TL++VL+ C L+ GKQIH
Sbjct: 154 DVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQI 213
Query: 252 FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV----------------------- 288
+ + SSL+++Y+KCG + A E+++
Sbjct: 214 LIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESR 273
Query: 289 --------RNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
R + +WN+M+ + LF +M++ + + T V+ AC
Sbjct: 274 GLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN--ETREDSRTLAAVINACIGL 331
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
G +E G+ +G+ +T++D+ + G +A ++ E+
Sbjct: 332 GFLETGKQ-MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV 379
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 244/479 (50%), Gaps = 35/479 (7%)
Query: 33 THSRSLRRGLQLHAHIIK---TGLETIPLLS---HHLINFYSKTQLPNSSLQVFNSSPHR 86
THS + GL + + I T +P L+ H+ + + ++PNS +
Sbjct: 30 THSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFV--------- 80
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAK------SCAALSSIH 140
+ ++I +++ PHL L +F M++ ++ I P+ +C
Sbjct: 81 ----YDTMIRICSRSSQPHLGLRYFLLMVK---EEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 141 VGLSLHALALKTAYHL-DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
VG +H +K L D V + ++ +Y + + AR VFDE+P +VV W ++ GY
Sbjct: 134 VGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF-DS 258
V+ G E L +FK++LV + ++F++++ L C L GK IH + K + +S
Sbjct: 194 VRCGLGSEGLEVFKEMLVR-GIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIES 252
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
FV ++L+ +Y+KCG +E A + FE+L RN+ W A++ A + + + ++++
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
G+KP+ + L VL AC+H G +E+G+ E M+ YGI P +HY+ +VDL+ RAG+
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRV--FEQGHV--SSGLNVL 434
L DA+ +IE+MPM+P SVWGALL GCR H + EL + E+G+V V
Sbjct: 373 LDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQ 432
Query: 435 LSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYN 493
LSN M+ +GI+K G S +E V F +GD SH ++I+
Sbjct: 433 LSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHT 491
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 245/479 (51%), Gaps = 35/479 (7%)
Query: 33 THSRSLRRGLQLHAHIIK---TGLETIPLLS---HHLINFYSKTQLPNSSLQVFNSSPHR 86
THS + GL + + I T +P L+ H+ + + ++PNS +
Sbjct: 30 THSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFV--------- 80
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAK------SCAALSSIH 140
+ ++I +++ PHL L +F M++ ++ I P+ +C
Sbjct: 81 ----YDTMIRICSRSSQPHLGLRYFLLMVK---EEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 141 VGLSLHALALKTAYHL-DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
VG +H +K L D V + ++ +Y + + AR VFDE+P +VV W ++ GY
Sbjct: 134 VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF-DS 258
V+ G E L +F+++LV+ + ++F++++ L C L GK IH + K S+ +S
Sbjct: 194 VRCGLGSEGLEVFREMLVK-GLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIES 252
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
FV ++L+ +Y+KCG +E A + F++L RN+ W A++ A + + + E+++
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
G+KP+ + L VL AC+H G +E+G+ E M+ Y I P +HY+ +VDL+ RAG+
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGR 372
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRV--FEQGHV--SSGLNVL 434
L DA+ +IE+MPM+P SVWGALL GCR H + EL + E+G+V V
Sbjct: 373 LDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQ 432
Query: 435 LSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYN 493
LSN M+ +G++K G S +E V F +GD SH ++I+
Sbjct: 433 LSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHT 491
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 233/475 (49%), Gaps = 38/475 (8%)
Query: 34 HSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSS 93
+S + + G ++HA IIKTG + +S L+ + K + + QVF+ P + + ++
Sbjct: 46 NSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNY 105
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS-----LHAL 148
+IS + ++ L L ++M G D + L K+ + S + +HA
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
+K LD + ++LVD Y K G++ AR VF+ M NVV + MI GY+ G E+A
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 209 LRLFKQVLVEEDVGVNDF-------------------------------TLSSVLRVCGA 237
+F V++ V N T +SV+ C
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 238 STLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAM 297
T E+G+Q+H K+ + + SSL+ +Y+KCG + A + F+++Q +N+ W +M
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSM 345
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY 357
+ ++ + ELF +MK ++PN++TFL L ACSH+GLV+KG FE M++DY
Sbjct: 346 IDGYGKNGNPEEALELFTRMKEFR-IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 358 GIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYV 417
++P +HYA +VDL+GRAG L A + MP P +W ALL+ C +HG+ ELAS
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIA 464
Query: 418 ADRVFE-QGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEE 471
A +F+ G + LSN ++++ + I K G SW E
Sbjct: 465 ASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSE 519
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 229/462 (49%), Gaps = 7/462 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
++ TI + L H + L G +H + + L + + L+N Y K + + VF
Sbjct: 217 DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 276
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ R TW+ +I+ + ++ AL+ R M G+ P+ + + C ++
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
G LH A++ + D+ + +SL+ MYAKC + VF + WS +I G V
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 396
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
Q +AL LFK+ + EDV N TL+S+L A L IH + KT F SS
Sbjct: 397 QNELVSDALGLFKR-MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQ 316
A+ L+ +YSKCG +E A++ F +Q +++ +W A++ H + ++F +
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFME 515
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
M GV PN ITF L ACSH+GLVE+G F M + Y S HY +VDLLGRA
Sbjct: 516 MVR-SGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRA 574
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
G+L +A +I +P EPT +VWGALL C H + +L A+++FE ++G VLL+
Sbjct: 575 GRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLA 634
Query: 437 NXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE-EGNRVHT 477
N M+ + G++K+ G S +E N V T
Sbjct: 635 NIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNSVDT 676
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 188/378 (49%), Gaps = 6/378 (1%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
+S++ GL +H I+++ + + L+ Y + VF+ +R +W+++I
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
S + +N + AL F M+ + D + + C L + +G ++H L +
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
+ V ++LV+MY KCG + AR VFD M R+V++W+ MI GY + G+ E AL L + +
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR-L 309
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
+ E V N T++S++ VCG + + GK +HGW + S + +SLIS+Y+KC
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
V+ ++ F + G W+A++ C Q+ + LF++M+ V+PN T +L
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR-EDVEPNIATLNSLLP 428
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQV---IEEMPME 392
A + + + + + K G +V + + G L+ A ++ I+E
Sbjct: 429 AYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 393 PTESVWGALLTGCRIHGD 410
+WGAL++G +HGD
Sbjct: 488 KDVVLWGALISGYGMHGD 505
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 171/328 (52%), Gaps = 8/328 (2%)
Query: 22 YRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFN 81
Y+++ NH A ++S+ + LH H+I G + +LS + Y+ + ++F
Sbjct: 18 YQSLLNHFAA---TQSISKTKALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFE 73
Query: 82 SSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGL--LPDDHILPTAAKSCAALSSI 139
P S +++ +I + + L H A+ F +M+ G+ +PD + P AK+ L S+
Sbjct: 74 EMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSM 133
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
+GL +H L++ + D +V ++L+ MY G++ AR+VFD M +R+V+SW+ MI GY
Sbjct: 134 KLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
+ G +AL +F +V E V ++ T+ S+L VCG LE+G+ +H +
Sbjct: 194 YRNGYMNDALMMFDW-MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
V ++L+++Y KCG ++ A F+ ++ R++ W M+ + EL M+
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ- 311
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQ 347
GV+PN +T ++ C A V G+
Sbjct: 312 FEGVRPNAVTIASLVSVCGDALKVNDGK 339
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 226/426 (53%), Gaps = 1/426 (0%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
LH ++K G+ + L+ YS+ S+ +++ S+ S +S++S +A+
Sbjct: 268 LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGD 327
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
+A+ +F + ++ + D L C S I +G+SLH A+K+ V +
Sbjct: 328 MDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNG 387
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+ MY+K ++ +F+++ ++SW+ +I G VQ G A +F Q+++ +
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLP 447
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
+ T++S+L C L LGK++HG+ + +F++ FV ++LI +Y+KCG A F
Sbjct: 448 DAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVF 507
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
+ ++ WN+M+ + +R + +M+ G+KP+ ITFL VL AC+H G V
Sbjct: 508 KSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMRE-KGLKPDEITFLGVLSACNHGGFV 566
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
++G+ F M K++GI P QHYA MV LLGRA +A+ +I +M ++P +VWGALL+
Sbjct: 567 DEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLS 626
Query: 404 GCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKE 463
C IH + E+ YVA ++F + + GL VL+SN M++D G
Sbjct: 627 ACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGY 686
Query: 464 TGLSWV 469
G+S +
Sbjct: 687 LGVSQI 692
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 176/373 (47%), Gaps = 11/373 (2%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
+ +G +H K+GLE + + LI+FYSK S+ +F +S +W+++I +
Sbjct: 167 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGA 226
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG-LSLHALALKTAYHL 156
++Q+ L A+ F+ M + I P + L S HV LH L +K
Sbjct: 227 YSQSGLQEEAITVFKNMFE----KNVEISPVTIIN---LLSAHVSHEPLHCLVVKCGMVN 279
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
D+ V +SLV Y++CG + A ++ ++V + ++ Y + G+ + A+ F +
Sbjct: 280 DISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTR 339
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
+ + ++ L +L C S+ +++G +HG+ K+ + V + LI++YSK V
Sbjct: 340 -QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 398
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
E FE+LQ L WN+++ C Q + FE+F QM GG+ P+ IT +L
Sbjct: 399 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 458
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
CS + G+ ++ E + ++D+ + G A V + + P +
Sbjct: 459 CSQLCCLNLGKELHGYTLRN-NFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTA 516
Query: 397 VWGALLTGCRIHG 409
W ++++G + G
Sbjct: 517 TWNSMISGYSLSG 529
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 178/393 (45%), Gaps = 22/393 (5%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
Q+ H+ K+GL+ + L+N Y K S+ +F+ P R W++LI +++N
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
A F ML+ G P L C + G S+H +A K+ LD V +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
+L+ Y+KC E+G A +F EM ++ VSW+ MI Y Q G EEA+ +FK + E++V
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKN-MFEKNVE 249
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
++ T+ ++L + + +H K + V +SL+ YS+CG + A +
Sbjct: 250 ISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 283 FEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGL 342
+ + ++ +++ A+ + F + + + +K + + + +L+ C +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL-CMKIDAVALVGILHGCKKSSH 362
Query: 343 VEKGQHYFELMKKDYGIEPGSQHYATMVD-LLGRAGKLQDAVQVI---EEMPMEPTESVW 398
++ G Y I+ G +V+ L+ K D V+ E++ P S W
Sbjct: 363 IDIGMSL-----HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS-W 416
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGL 431
++++GC G A VF Q ++ GL
Sbjct: 417 NSVISGCVQSGRAS----TAFEVFHQMMLTGGL 445
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 124/273 (45%), Gaps = 16/273 (5%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G+ LH + IK+GL T L+ + LI YSK + L +F +W+S+IS Q
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQ 425
Query: 101 NDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
+ A + F QM+ GLLPD + + C+ L +++G LH L+ + + F
Sbjct: 426 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENF 485
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
V ++L+DMYAKCG A +VF + +W+ MI GY G AL + + + E+
Sbjct: 486 VCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLE-MREK 544
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYS-------- 271
+ ++ T VL C ++ GK CF+ F S + Y+
Sbjct: 545 GLKPDEITFLGVLSACNHGGFVDEGK----ICFRAMIKE--FGISPTLQHYALMVGLLGR 598
Query: 272 KCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH 304
C E Y ++ + +W A+L AC H
Sbjct: 599 ACLFTEALYLIWKMDIKPDSAVWGALLSACIIH 631
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 119/235 (50%), Gaps = 3/235 (1%)
Query: 85 HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAK-SCAALSSIHVGL 143
+R + + SL+ S ++ + FR +LR L P+ + + + + +S + +
Sbjct: 10 YRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQV 69
Query: 144 -SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
+ K+ V+V +SL+++Y K G + A+ +FDEMP R+ V W+ +I GY +
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV 262
G + +A +LF V++++ + TL ++L CG + G+ +HG K+ + V
Sbjct: 130 GYECDAWKLFI-VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
++LIS YSKC + A F E++ ++ WN M+ A +Q +F+ M
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Query: 216 LVEEDVGVNDFTLSSVLRVCGAS--TLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
L+ + N FT+S L+ S + +Q+ K+ D +V +SL++LY K
Sbjct: 39 LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKK 98
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G V A F+E+ R+ +WNA++ +++ + ++LF M G P+ T + +
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ-QGFSPSATTLVNL 157
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
L C G V +G+ + K G+E SQ ++ + +L A + EM +
Sbjct: 158 LPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 394 TESVWGALLTGCRIHGDTELASYVADRVFEQ 424
T S W ++ G E A V +FE+
Sbjct: 217 TVS-WNTMIGAYSQSGLQEEAITVFKNMFEK 246
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 210/393 (53%), Gaps = 9/393 (2%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS 92
T S +++ G+QLH ++K GLE+ S L++FY K L + +VF + R W+
Sbjct: 153 TDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWN 212
Query: 93 SLISSFAQNDLPHLALDFFRQM--LRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALAL 150
+L+SS+ N + A + M + D + +C I G +HA+
Sbjct: 213 ALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILF 268
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
K +Y D+ VA++L++MYAK + AR F+ M RNVVSW+ MI G+ Q GE EA+R
Sbjct: 269 KVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMR 328
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
LF Q+L+E ++ ++ T +SVL C + + KQ+ K VA+SLIS Y
Sbjct: 329 LFGQMLLE-NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSY 387
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
S+ G + A F ++ +L W +++ A A H + ++FE M + ++P+ ITF
Sbjct: 388 SRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM--LQKLQPDKITF 445
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
L VL ACSH GLV++G F+ M + Y IE +HY ++DLLGRAG + +A V+ MP
Sbjct: 446 LEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
Query: 391 MEPTESVWGALLTGCRIHGDTELASYVADRVFE 423
EP+ A GC IH E + A ++ E
Sbjct: 506 TEPSTHALAAFTGGCNIHEKRESMKWGAKKLLE 538
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 21/380 (5%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
Q H ++K G+ L + L+ Y+K + + + ++F+ P R+ TW+ LI Q D
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 103 -----LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
HL + ++L + D + C +++ G+ LH L +K
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS 176
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
F ++SLV Y KCG I AR VF+ + R++V W+ ++ YV G +EA L K +
Sbjct: 177 CFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGS 236
Query: 218 EEDVGVND-FTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
+++ D FT SS+L C +E GKQIH FK S+ VA++L+++Y+K +
Sbjct: 237 DKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHL 292
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
A + FE + VRN+ WNAM++ AQ+ LF QM + ++P+ +TF VL +
Sbjct: 293 SDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML-LENLQPDELTFASVLSS 351
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLL----GRAGKLQDAVQVIEEMPME 392
C+ + + + ++ K GS + ++ + L R G L +A+ + E
Sbjct: 352 CAKFSAIWEIKQVQAMVTK-----KGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-E 405
Query: 393 PTESVWGALLTGCRIHGDTE 412
P W +++ HG E
Sbjct: 406 PDLVSWTSVIGALASHGFAE 425
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 238/461 (51%), Gaps = 13/461 (2%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATT-WSSLISSFAQN 101
++H K G ++ + L+ YSK + +VF+ P R + W++L++ ++Q
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
AL F +M G+ H + + + I G S+H LA+KT D+ V+
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL---VE 218
++L+DMY K + A ++F+ M R++ +W+ ++ + G+ + L LF+++L +
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF----DSSCFVASSLISLYSKCG 274
D+ TL++VL CG L G++IHG+ + S+ F+ +SL+ +Y KCG
Sbjct: 361 PDI----VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCG 416
Query: 275 AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
+ A F+ ++V++ WN M+ + ++F M GVKP+ ITF+ +L
Sbjct: 417 DLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCM-CRAGVKPDEITFVGLL 475
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
ACSH+G + +G+++ M+ Y I P S HYA ++D+LGRA KL++A ++ P+
Sbjct: 476 QACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDN 535
Query: 395 ESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKM 454
VW ++L+ CR+HG+ +LA R+ E G VL+SN
Sbjct: 536 PVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDA 595
Query: 455 LRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKL 495
+R Q +KK G SW+ N VHTF G+++H + I++ L
Sbjct: 596 MRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 195/382 (51%), Gaps = 16/382 (4%)
Query: 41 GLQLHAHIIKTG-LETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
G Q+H +++ G L+ P L+N Y+K L ++ VF S R +++LIS F
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFV 137
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
N P A++ +R+M G+LPD + P+ K A+ V +H LA K + D +
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK-KVHGLAFKLGFDSDCY 196
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
V S LV Y+K + A+ VFDE+P R + V W+ ++ GY Q+ E+AL +F + + E
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSK-MRE 255
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
E VGV+ T++SVL S ++ G+ IHG KT S V+++LI +Y K +E
Sbjct: 256 EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 279 AYQAFEELQVRNLGMWNAMLIA---CAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
A FE + R+L WN++L C H + T LFE+M G++P+ +T VL
Sbjct: 316 ANSIFEAMDERDLFTWNSVLCVHDYCGDH---DGTLALFERML-CSGIRPDIVTLTTVLP 371
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQH---YATMVDLLGRAGKLQDAVQVIEEMPME 392
C + +G+ M + S + + +++D+ + G L+DA V + M ++
Sbjct: 372 TCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Query: 393 PTESVWGALLTGCRIHGDTELA 414
+ S W ++ G + ELA
Sbjct: 432 DSAS-WNIMINGYGVQSCGELA 452
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 134/296 (45%), Gaps = 17/296 (5%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
TI + L A T S + G +H +KTG + ++S+ LI+ Y K++ + +F +
Sbjct: 264 TITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R TW+S++ L F +ML G+ PD L T +C L+S+ G
Sbjct: 324 DERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGR 383
Query: 144 SLHALALKTAY----HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGY 199
+H + + + F+ +SL+DMY KCG++ AR VFD M ++ SW+ MI GY
Sbjct: 384 EIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGW------CFK 253
E AL +F + V ++ T +L+ C S L G+
Sbjct: 444 GVQSCGELALDMF-SCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILP 502
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQ-AFEELQVRNLGMWNAMLIACAQHAHTN 308
TS +C +I + + +E AY+ A + N +W ++L +C H + +
Sbjct: 503 TSDHYAC-----VIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKD 553
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 14/277 (5%)
Query: 131 KSCAALSSIHVGLSLHALALKTAYHLDVFVA-SSLVDMYAKCGEIGYARNVFDEMPHRNV 189
+ CA G +H ++ + D A +SLV+MYAKCG + A VF R+V
Sbjct: 68 QRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDV 126
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHG 249
++ +I G+V G +A+ +++ + + + +T S+L+ A L ++ K++HG
Sbjct: 127 FGYNALISGFVVNGSPLDAMETYRE-MRANGILPDKYTFPSLLKGSDAMELSDV-KKVHG 184
Query: 250 WCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG-MWNAMLIACAQHAHTN 308
FK FDS C+V S L++ YSK +VE A + F+EL R+ +WNA++ +Q
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 309 RTFELFEQMKSVG-GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
+F +M+ G GV + IT VL A + +G ++ G+ L K GS
Sbjct: 245 DALLVFSKMREEGVGVSRHTIT--SVLSAFTVSGDIDNGRSIHGLAVK---TGSGSDIVV 299
Query: 368 T--MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
+ ++D+ G++ L++A + E M E W ++L
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 234/521 (44%), Gaps = 67/521 (12%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS----------------- 83
G QLH ++KTG + LI+ YSK +FN S
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 84 ----------------PHRSAT-TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHIL 126
P + T +W++LI+ +AQN AL M GL D+H
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 127 PTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYA--------- 177
++L S+ +G +HA LK + + FV+S +VD+Y KCG + YA
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF 323
Query: 178 ----------------------RNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
+ +FD + +N+V W+ M GY+ L + + L L +
Sbjct: 324 GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
+ E + + SVL C +E GK+IHG +T + ++ + +YSKCG
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
VE A + F+ R+ M+NAM+ CA H H ++F+ FE M GG KP+ ITF+ +L
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE-GGFKPDEITFMALLS 502
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP-MEPT 394
AC H GLV +G+ YF+ M + Y I P + HY M+DL G+A +L A++++E + +E
Sbjct: 503 ACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKD 562
Query: 395 ESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKM 454
+ GA L C + +TEL V +++ + + ++N
Sbjct: 563 AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQ 622
Query: 455 LRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKL 495
+R + ++ +G SW + H F + D SH +T IY L
Sbjct: 623 MRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 192/478 (40%), Gaps = 110/478 (23%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS--- 92
+ L+ G H IK+G + S+ L+N YSK+ L + VF+ R+ +W+
Sbjct: 2 KCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVI 61
Query: 93 -----------------------------SLISSFAQND-LPHLALDFFRQMLRI---GL 119
+L+S FA+ D A++ F +M R +
Sbjct: 62 AAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDI 121
Query: 120 LPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKC-------- 171
DD + T K A L+++ G LH + +KT F SSL+ MY+KC
Sbjct: 122 WIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCN 181
Query: 172 -------------------------GEIGYARNVFDEMPHRN-VVSWSGMIYGYVQLGED 205
G+I A +VF P N +SW+ +I GY Q G +
Sbjct: 182 IFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYE 241
Query: 206 EEALRLFKQVLVEED-VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
EEAL++ V +EE+ + ++ + +VL V + L++GK++H K S+ FV+S
Sbjct: 242 EEALKM--AVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSS 299
Query: 265 SLISLYSKCGAVEGAYQA-------------------------------FEELQVRNLGM 293
++ +Y KCG ++ A A F+ L +NL +
Sbjct: 300 GIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVV 359
Query: 294 WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HYFE 351
W AM + + EL + P+ + + VL ACS +E G+ H
Sbjct: 360 WTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHS 419
Query: 352 LMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
L GI + VD+ + G ++ A ++ + E ++ A++ GC HG
Sbjct: 420 LRT---GILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 151/349 (43%), Gaps = 44/349 (12%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSK-----------------TQ 71
L L+ +SL+ G ++HA ++K G + +S +++ Y K
Sbjct: 267 LNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL 326
Query: 72 LPNSSL--------------QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRI 117
SS+ ++F+S ++ W+++ + P L+ R +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIAN 386
Query: 118 GL-LPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGY 176
PD ++ + +C+ + + G +H +L+T +D + ++ VDMY+KCG + Y
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEY 446
Query: 177 ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCG 236
A +FD R+ V ++ MI G G + ++ + F+ + E ++ T ++L C
Sbjct: 447 AERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFED-MTEGGFKPDEITFMALLSACR 505
Query: 237 ASTLLELGKQIHGWCFKTSFDSSCFVASS-----LISLYSKCGAVEGAYQAFEEL-QV-R 289
L+ G++ FK+ ++ + +I LY K ++ A + E + QV +
Sbjct: 506 HRGLVLEGEKY----FKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEK 561
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
+ + A L AC+ + +T E+ E++ + G + + YA S
Sbjct: 562 DAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASS 610
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 232/481 (48%), Gaps = 16/481 (3%)
Query: 32 LTHSRSLR----RGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS 87
LT S SL +GLQLH+ I + G +S +++ Y+K + F+ PHRS
Sbjct: 84 LTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRS 143
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
+W++LIS + + LA F QM H+ + + G A
Sbjct: 144 EVSWTALISGYIRCGELDLASKLFDQM--------PHVKDVVIYNAMMDGFVKSGDMTSA 195
Query: 148 LAL-KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
L H V ++++ Y +I AR +FD MP RN+VSW+ MI GY Q + +
Sbjct: 196 RRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
E +RLF+++ + +D T+ SVL + L LG+ H + + D V +++
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAI 315
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+ +YSKCG +E A + F+E+ + + WNAM+ A + + +LF M + KP+
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM--MIEEKPD 373
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
IT L V+ AC+H GLVE+G+ +F +M ++ G+ +HY MVDLLGRAG L++A +I
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 387 EEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXX 446
MP EP + + L+ C + D E A + + E + G VLL N
Sbjct: 433 TNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWD 492
Query: 447 XXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAG 506
++R KKE G S +E V F +GD +H I+ L +L M +
Sbjct: 493 DFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEK 552
Query: 507 Y 507
Y
Sbjct: 553 Y 553
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 173/341 (50%), Gaps = 16/341 (4%)
Query: 78 QVFNSSPHRSATTWS-SLISSFAQNDLPHLALDFFRQMLR-IGLLPDDHILPTAAKSCAA 135
++F+ P R + S S+I ++ + + +R + + PD+ T KSC+
Sbjct: 31 KLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSL 90
Query: 136 LSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGM 195
++ GL LH+ + + D++V++ +VDMYAK G++G ARN FDEMPHR+ VSW+ +
Sbjct: 91 SMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTAL 150
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
I GY++ GE + A +LF Q+ +DV + + + ++ ++ L F
Sbjct: 151 ISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL--------FDEM 202
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFE 315
+ +++I Y ++ A + F+ + RNL WN M+ Q+ LF+
Sbjct: 203 THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQ 262
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYATMVDLL 373
+M++ + P+ +T L VL A S G + G+ H F KK ++ + ++D+
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK---LDKKVKVCTAILDMY 319
Query: 374 GRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
+ G+++ A ++ +EMP E + W A++ G ++G+ A
Sbjct: 320 SKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNARAA 359
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 10/198 (5%)
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSG-MIYGYVQLGEDEEA 208
L+ A +V + + + + A IGYAR +FD+ P R+ S MI Y++ + ++
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 209 LRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
L++ + E ++FT +++ + C S + G Q+H ++ F + +V++ ++
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
+Y+K G + A AF+E+ R+ W A++ + + +LF+QM V V
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV----- 176
Query: 329 TFLCVLYACSHAGLVEKG 346
V+Y G V+ G
Sbjct: 177 ----VIYNAMMDGFVKSG 190
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 87/206 (42%), Gaps = 2/206 (0%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
TI + L A++ + +L G H + + L+ + +++ YSK + ++F+
Sbjct: 276 TILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM 335
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
P + +W+++I +A N ALD F M+ I PD+ + +C + G
Sbjct: 336 PEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGR 394
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGYVQL 202
+ + + + +VD+ + G + A ++ MP N + S + Q
Sbjct: 395 KWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQY 454
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTL 228
+ E A R+ K+ + E ++ L
Sbjct: 455 KDIERAERILKKAVELEPQNDGNYVL 480
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 233/487 (47%), Gaps = 47/487 (9%)
Query: 48 IIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLA 107
++ +IP L H+ + L ++ +VF+ P + +++I F + A
Sbjct: 23 LVTKSPNSIPELVKHI-----DSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEA 77
Query: 108 LDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDM 167
F+++L +G+ P++ T S + +G LH ALK +VFV S++++
Sbjct: 78 SQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNC 137
Query: 168 YAKCGEIGYARNVFDE-------------------------------MPHRNVVSWSGMI 196
Y K + AR FD+ MP R+VV+W+ +I
Sbjct: 138 YVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVI 197
Query: 197 YGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFK--- 253
G+ Q G +EEA+ F +L E V N+ T + GK IH K
Sbjct: 198 GGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLG 257
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ--VRNLGMWNAMLIACAQHAHTNRTF 311
F+ FV +SLIS YSKCG +E + AF +L+ RN+ WN+M+ A +
Sbjct: 258 KRFN--VFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAV 315
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGS---QHYAT 368
+FE+M ++PN +T L VL+AC+HAGL+++G YF DY +P +HYA
Sbjct: 316 AMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYAC 374
Query: 369 MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVS 428
MVD+L R+G+ ++A ++I+ MP++P W ALL GC+IH + LA A ++ E
Sbjct: 375 MVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRD 434
Query: 429 SGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKT 488
V+LSN + +++ G+K+ TG SW+E +++ F D+++
Sbjct: 435 VSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELK 494
Query: 489 VEIYNKL 495
E+Y L
Sbjct: 495 DEVYRML 501
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 152/313 (48%), Gaps = 39/313 (12%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSK-------------TQLPN----- 74
T SR ++ G QLH + +K GL + + ++N Y K T+ PN
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 75 -------------SSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIG-LL 120
+L +F + P RS TW+++I F+Q A++ F MLR G ++
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 121 PDDHILPTAAKSCAALSSIHVGLSLHALALK-TAYHLDVFVASSLVDMYAKCGEIGYARN 179
P++ P A + + ++S G S+HA A+K +VFV +SL+ Y+KCG + +
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 180 VFDEM--PHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA 237
F+++ RN+VSW+ MI+GY G EEA+ +F++++ + ++ N+ T+ VL C
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNH 343
Query: 238 STLLELGKQIHGWCFKTSFDSSCFVA---SSLISLYSKCGAVEGAYQAFEELQVR-NLGM 293
+ L++ G D + + ++ + S+ G + A + + + + +G
Sbjct: 344 AGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGF 403
Query: 294 WNAMLIACAQHAH 306
W A+L C H++
Sbjct: 404 WKALLGGCQIHSN 416
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/479 (30%), Positives = 234/479 (48%), Gaps = 51/479 (10%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
++ G+Q+H + KTGL + L + LI Y K S Q+F+ P R + +++S+I
Sbjct: 137 VKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDG 196
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL- 156
+ + L A + F ++P K+ + +S+ G + + + A L
Sbjct: 197 YVKCGLIVSARELF------------DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLF 244
Query: 157 -------------------------------------DVFVASSLVDMYAKCGEIGYARN 179
DV ++++D YAK G + +A+
Sbjct: 245 ADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKT 304
Query: 180 VFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGAST 239
+FD+MPHR+VV+++ M+ GYVQ EAL +F + E + +D TL VL
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 240 LLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLI 299
L +H + + F + +LI +YSKCG+++ A FE ++ +++ WNAM+
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 300 ACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGI 359
A H F++ Q++ + +KP+ ITF+ VL ACSH+GLV++G FELM++ + I
Sbjct: 425 GLAIHGLGESAFDMLLQIERLS-LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKI 483
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVAD 419
EP QHY MVD+L R+G ++ A +IEEMP+EP + +W LT C H + E VA
Sbjct: 484 EPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAK 543
Query: 420 RVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTF 478
+ Q + VLLSN M++++ I+K G SW+E RVH F
Sbjct: 544 HLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 180/410 (43%), Gaps = 42/410 (10%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSS-----------LQVFNSSPHRSATTW 91
Q+H +IKTG+ L+ ++ ++ ++ P + + F+ W
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 92 SSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALK 151
+++I S + P AL ML G+ D L K+C+ L + G+ +H K
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 152 TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRL 211
T D+F+ + L+ +Y KCG +G +R +FD MP R+ VS++ MI GYV+ G A L
Sbjct: 150 TGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAREL 209
Query: 212 FKQV------LVEEDVGVNDFTLSS--------VLRVCGASTLLELGKQIHGWC------ 251
F + L+ + ++ + +S + L+ I G+
Sbjct: 210 FDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIE 269
Query: 252 -FKTSFD----SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAH 306
K FD +++I Y+K G V A F+++ R++ +N+M+ Q+ +
Sbjct: 270 DAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKY 329
Query: 307 TNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG--QHYFELMKKDYGIEPGSQ 364
E+F M+ + P+ T + VL A + G + K H + + K+ Y G +
Sbjct: 330 HMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY---LGGK 386
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
++D+ + G +Q A+ V E + + + W A++ G IHG E A
Sbjct: 387 LGVALIDMYSKCGSIQHAMLVFEGIENKSIDH-WNAMIGGLAIHGLGESA 435
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A+ L + + +H +I++ L LI+ YSK ++ VF ++S
Sbjct: 357 LPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 416
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
W+++I A + L A D Q+ R+ L PDD +C+ + GL L
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFEL 476
Query: 149 ALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP-HRNVVSW 192
++ + ++ + +VD+ ++ G I A+N+ +EMP N V W
Sbjct: 477 -MRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIW 522
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 209/401 (52%), Gaps = 2/401 (0%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
++F+S P S + W++++S ++ + A+ FRQM L PD L SCA L
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 138 SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDE-MPHRNVVSWSGMI 196
+ G +H + ++T + + S L+ +Y++C ++ + +FD+ + ++ W+ MI
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490
Query: 197 YGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF 256
G+ D +AL LF+++ + N+ + ++VL C L G+Q HG K+ +
Sbjct: 491 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY 550
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQ 316
S FV ++L +Y KCG ++ A Q F+ + +N +WN M+ + + L+ +
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
M S G KP+ ITF+ VL ACSH+GLVE G M++ +GIEP HY +VD LGRA
Sbjct: 611 MIS-SGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRA 669
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
G+L+DA ++ E P + + +W LL+ CR+HGD LA VA+++ SS VLLS
Sbjct: 670 GRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
Query: 437 NXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHT 477
N ++ + K G SW GN + +
Sbjct: 730 NTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDLDS 770
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 186/392 (47%), Gaps = 35/392 (8%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+ F K + +VF+ P R +W+++IS + AL +++M+ G LP
Sbjct: 78 FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPS 137
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEI-GYARNVF 181
L + +C+ + G+ H +A+KT ++FV ++L+ MYAKCG I Y VF
Sbjct: 138 RFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 197
Query: 182 DEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVC----GA 237
+ + N VS++ +I G + + EA+++F+ ++ E+ V V+ LS++L + G
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFR-LMCEKGVQVDSVCLSNILSISAPREGC 256
Query: 238 STLL-----ELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG 292
+L ELGKQIH + F + +SL+ +Y+K + GA F E+ N+
Sbjct: 257 DSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV 316
Query: 293 MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL 352
WN M++ Q ++++ E +M+ G +PN +T + VL AC +G VE G+ F
Sbjct: 317 SWNIMIVGFGQEYRSDKSVEFLTRMRD-SGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 353 MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP---MEPTESVWGALLTGC---- 405
+ +P + M+ ++A+ +M ++P ++ +L+ C
Sbjct: 376 IP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 406 ------RIHGDTELASYVADRVFEQGHVSSGL 431
+IHG + + + H+ SGL
Sbjct: 431 FLEGGKQIHG-----VVIRTEISKNSHIVSGL 457
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 17/292 (5%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR-SATTWSSL 94
R L G Q+H +I+T + + LI YS+ + S +F+ + W+S+
Sbjct: 430 RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSM 489
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
IS F N L AL FR+M + +L P++ T SC+ L S+ G H L +K+
Sbjct: 490 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSG 549
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
Y D FV ++L DMY KCGEI AR FD + +N V W+ MI+GY G +EA+ L++
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYR 609
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLELG-------KQIHGWCFKTSFDSSCFVASSL 266
+ ++ + T SVL C S L+E G ++IHG + D + L
Sbjct: 610 K-MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG--IEPELDHYICIVDCL 666
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLG-MWNAMLIACAQHAHTNRTFELFEQM 317
+ G +E A + E ++ +W +L +C H + + E++
Sbjct: 667 ----GRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKL 714
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 173/378 (45%), Gaps = 52/378 (13%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQ-LPNSSLQVFNSSPHRSATTWSSLISSFA 99
G++ H +KTGL+ + + L++ Y+K + + ++VF S + +++++I A
Sbjct: 157 GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLA 216
Query: 100 QNDLPHLALDFFRQMLRIGLLPD----DHILPTAA--KSCAALSSIH---VGLSLHALAL 150
+ + A+ FR M G+ D +IL +A + C +LS I+ +G +H LAL
Sbjct: 217 RENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLAL 276
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
+ + D+ + +SL+++YAK ++ A +F EMP NVVSW+ MI G+ Q ++++
Sbjct: 277 RLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVE 336
Query: 211 LFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS 268
++ D G N+ T SVL G CF++
Sbjct: 337 FLTRM---RDSGFQPNEVTCISVL----------------GACFRS-------------- 363
Query: 269 LYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
G VE + F + ++ WNAML + + H F QM+ +KP+
Sbjct: 364 -----GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ-FQNLKPDKT 417
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
T +L +C+ +E G+ ++ + I S + ++ + K++ + + ++
Sbjct: 418 TLSVILSSCARLRFLEGGKQIHGVVIRTE-ISKNSHIVSGLIAVYSECEKMEISECIFDD 476
Query: 389 MPMEPTESVWGALLTGCR 406
E + W ++++G R
Sbjct: 477 CINELDIACWNSMISGFR 494
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDE------------------ 183
G +H ++ D ++ + L+D+Y +CG+ YAR VFDE
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 184 -------------MPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSS 230
MP R+VVSW+ MI V+ G +E+AL ++K+ +V + + FTL+S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR-MVCDGFLPSRFTLAS 143
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCG-AVEGAYQAFEELQVR 289
VL C G + HG KT D + FV ++L+S+Y+KCG V+ + FE L
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
N + A++ A+ ++F M G
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKG 235
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 26 CNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPH 85
C+ L +L H R Q H ++K+G + + L + Y K +S+ Q F++
Sbjct: 529 CSRLCSLLHGR------QFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR 582
Query: 86 RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSL 145
++ W+ +I + N A+ +R+M+ G PD + +C+ + GL +
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Query: 146 HALALK---TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSW-----SGMI 196
+ + LD ++ +VD + G + A + + P++ + V W S +
Sbjct: 643 LSSMQRIHGIEPELDHYIC--IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRV 700
Query: 197 YGYVQLGED--EEALRLFKQ 214
+G V L E+ +RL Q
Sbjct: 701 HGDVSLARRVAEKLMRLDPQ 720
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 237/478 (49%), Gaps = 11/478 (2%)
Query: 29 LLALTHSRSLRRGLQL----HAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSP 84
++ L S S + L+L HA I+ G++ +++ I+ Y K +S+ VF +
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 85 H--RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
R+ +W+S+ +++ A + MLR PD A SC ++ G
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
+H+ A+ D+ ++ + MY+K + AR +FD M R VSW+ MI GY +
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWC--FKTSFDSSC 260
G+ +EAL LF +++ + TL S++ CG LE GK I + D+
Sbjct: 336 GDMDEALALF-HAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDN-V 393
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
+ ++LI +YSKCG++ A F+ + + W M+ A + +LF +M +
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Query: 321 GGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
KPN ITFL VL AC+H+G +EKG YF +MK+ Y I PG HY+ MVDLLGR GKL+
Sbjct: 454 D-YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLE 512
Query: 381 DAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXX 440
+A+++I M +P +WGALL C+IH + ++A A+ +F + V ++N
Sbjct: 513 EALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYA 572
Query: 441 XXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEEL 498
+++ + IKK G S ++ + H+F G+ H + IY L L
Sbjct: 573 AAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 179/392 (45%), Gaps = 11/392 (2%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+HAH+IK+ + + ++ + K + + +VF P R ATTW++++S F Q+
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
A FR+M + PD + T +S + S+ + ++HA+ ++ + V VA++
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 164 LVDMYAKCGEIGYARNVFDEMPH--RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
+ Y KCG++ A+ VF+ + R VVSW+ M Y GE +A L+ +++ E+
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY-CLMLREEF 252
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
+ T ++ C L G+ IH D ++ IS+YSK A
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 282 AFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
F+ + R W M+ A+ + LF M G KP+ +T L ++ C G
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIK-SGEKPDLVTLLSLISGCGKFG 371
Query: 342 LVEKGQHYFELMKKDYGIEPGSQHYAT-MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
+E G+ + + YG + + ++D+ + G + +A + + P E T W
Sbjct: 372 SLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTT 429
Query: 401 LLTGCRIHG----DTELASYVADRVFEQGHVS 428
++ G ++G +L S + D ++ H++
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHIT 461
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 136/272 (50%), Gaps = 4/272 (1%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
+++ S S W+ I + P +L FR+M R G P++ P AK+CA L+
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 138 SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIY 197
+ +HA +K+ + DVFV ++ VDM+ KC + YA VF+ MP R+ +W+ M+
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 198 GYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
G+ Q G ++A LF+++ + E + + T+ ++++ L+L + +H + D
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNE-ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQV--RNLGMWNAMLIACAQHAHTNRTFELFE 315
VA++ IS Y KCG ++ A FE + R + WN+M A + F L+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ 347
M KP+ TF+ + +C + + +G+
Sbjct: 246 LMLR-EEFKPDLSTFINLAASCQNPETLTQGR 276
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 20/302 (6%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T N + + +L +G +H+H I G + + I+ YSK++ S+ +F+
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R+ +W+ +IS +A+ AL F M++ G PD L + C S+ G
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 144 SLHALA-LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
+ A A + +V + ++L+DMY+KCG I AR++FD P + VV+W+ MI GY
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG-------KQIHGWCFKTS 255
G EAL+LF + +++ D N T +VL+ C S LE G KQ++
Sbjct: 438 GIFLEALKLFSK-MIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN--ISPG 494
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELF 314
D S ++ L + G +E A + + + + G+W A+L AC H R ++
Sbjct: 495 LDHY----SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH----RNVKIA 546
Query: 315 EQ 316
EQ
Sbjct: 547 EQ 548
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 228/472 (48%), Gaps = 35/472 (7%)
Query: 74 NSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSC 133
N +Q N S + +W+S I+ +N A F M G+ P+ C
Sbjct: 22 NPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC 81
Query: 134 AALSSIHVGLS--LHALALKTAYHLD-VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVV 190
+S L LH A K + V V ++++ MY+K G AR VFD M +N V
Sbjct: 82 GDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV 141
Query: 191 SWSGMIYGYVQLGEDEEALRLFKQV----LVEEDVGVNDFT------------------- 227
+W+ MI GY++ G+ + A ++F ++ L+ +N F
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 228 -------LSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+ + L C L G +H + F ++ V++SLI LY +CG VE A
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
Q F ++ R + WN++++ A + + + + F +M+ G KP+ +TF L ACSH
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE-KGFKPDAVTFTGALTACSHV 320
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
GLVE+G YF++MK DY I P +HY +VDL RAG+L+DA+++++ MPM+P E V G+
Sbjct: 321 GLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGS 380
Query: 401 LLTGCRIHGDTELASYVADRVFEQGHVSSGLN-VLLSNXXXXXXXXXXXXXXXKMLRDQG 459
LL C HG+ + + + +V S N V+LSN + ++ G
Sbjct: 381 LLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLG 440
Query: 460 IKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADT 511
+KK+ G S +E + +H F AGD +H +T I LE + ++ G V +T
Sbjct: 441 LKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 129/248 (52%), Gaps = 5/248 (2%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+I+ Y ++ +++ ++F+ P R +W+++I+ F + AL +FR+M G+ PD
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
+ A +C L ++ GL +H L + +V V++SL+D+Y +CG + +AR VF
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 183 EMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLE 242
M R VVSW+ +I G+ G E+L F++ + E+ + T + L C L+E
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRK-MQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 243 LGKQIHGWCFKTSFDSSCFVA--SSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLI 299
G + + K + S + L+ LYS+ G +E A + + + ++ N + ++L
Sbjct: 325 EGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 300 ACAQHAHT 307
AC+ H +
Sbjct: 384 ACSNHGNN 391
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
+Y I L A T+ +L GL +H +++ + +S+ LI+ Y + + QVF
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ R+ +W+S+I FA N H +L +FR+M G PD A +C+ + +
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 141 VGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR 187
GL + +K Y + + LVD+Y++ G + A + MP +
Sbjct: 325 EGLRYFQI-MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 248/507 (48%), Gaps = 39/507 (7%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +H I + ++ + + LI+ Y + + + ++F+ R A +W+++I+ +A
Sbjct: 163 GRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS 222
Query: 101 NDLPHLALDFFRQML--------------------------RIGLLPDDHILPTAA---- 130
+ A + F +M +GL+ PT+
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVA 282
Query: 131 -----KSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
K+C+ + +I +G +H LA+ ++Y V ++L+ MY+KC ++ +A VF +
Sbjct: 283 MIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE 342
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
++ +W+ +I GY QL + EEA L +++LV N TL+S+L +C L+ GK
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVA-GFQPNSITLASILPLCARIANLQHGK 401
Query: 246 QIHGWCFKTS-FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH 304
+ H + + F + +SL+ +Y+K G + A Q + + R+ + +++
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQ 461
Query: 305 AHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQ 364
LF++M + G+KP+ +T + VL ACSH+ LV +G+ F M+ +YGI P Q
Sbjct: 462 GEGGVALALFKEM-TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQ 520
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQ 424
H++ MVDL GRAG L A +I MP +P+ + W LL C IHG+T++ + A+++ E
Sbjct: 521 HFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEM 580
Query: 425 GHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRS 484
+ G VL++N ++RD G+KK+ G +W++ + F+ GD S
Sbjct: 581 KPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTS 640
Query: 485 HAKTVEIYNKLEELGDEMA-KAGYVAD 510
+ Y L+ L M AGY +
Sbjct: 641 SPEACNTYPLLDGLNQLMKDNAGYAIN 667
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 194/420 (46%), Gaps = 36/420 (8%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSA 88
L A R+ G+Q+HAH I +G+E +L L+ FYS L N + + +S
Sbjct: 50 LSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP 109
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
W+ LI+S+A+N+L + +++M+ G+ PD P+ K+C + G +H
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEA 208
++Y ++V ++L+ MY + +G AR +FD M R+ VSW+ +I Y G EA
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 209 LRLFKQVL---VEEDV-------------------------------GVNDFTLSSVLRV 234
LF ++ VE V ++ + L+
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 235 CGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMW 294
C + LGK+IHG +S+D V ++LI++YSKC + A F + + +L W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 295 NAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMK 354
N+++ AQ + L +M V G +PN IT +L C+ ++ G+ + +
Sbjct: 350 NSIISGYAQLNKSEEASHLLREML-VAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 355 KDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
+ + + + ++VD+ ++GK+ A QV + M + E + +L+ G G+ +A
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVA 467
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 110/225 (48%), Gaps = 5/225 (2%)
Query: 120 LPDDHILPTAAK---SCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGY 176
+ DD +L +AA +C + + G+ +HA + + + LV Y+
Sbjct: 37 VSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNE 96
Query: 177 ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCG 236
A+++ + + + W+ +I Y + EE + +K+ +V + + + FT SVL+ CG
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKR-MVSKGIRPDAFTYPSVLKACG 155
Query: 237 ASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNA 296
+ + G+ +HG +S+ SS +V ++LIS+Y + + A + F+ + R+ WNA
Sbjct: 156 ETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNA 215
Query: 297 MLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
++ A + FELF++M GV+ + IT+ + C G
Sbjct: 216 VINCYASEGMWSEAFELFDKMW-FSGVEVSVITWNIISGGCLQTG 259
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 233/473 (49%), Gaps = 32/473 (6%)
Query: 29 LLALTHSRSLRRGL-QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS 87
LL L H + R L ++HAH+++ L LL H I+ + + +VF+ + +
Sbjct: 7 LLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPN 66
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
++++I ++ P +L FF M G+ D++ KSC++LS + G +H
Sbjct: 67 VLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHG 126
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
++T +H + +V++Y G +G A+ VFDEM RNVV W+ MI G+ G+ E
Sbjct: 127 ELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVER 186
Query: 208 ALRLFKQV------------------------------LVEEDVGVNDFTLSSVLRVCGA 237
L LFKQ+ ++++ ++ T+ +VL + +
Sbjct: 187 GLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISAS 246
Query: 238 STLLELGKQIHGWCFKTS-FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNA 296
+L+ GK IH + F V ++L+ Y K G +E A F ++Q RN+ WN
Sbjct: 247 LGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNT 306
Query: 297 MLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKD 356
++ A + +LF+ M G V PN TFL VL CS+ G VE+G+ F LM +
Sbjct: 307 LISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
Query: 357 YGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASY 416
+ +E ++HY MVDL+ R+G++ +A + ++ MP+ ++WG+LL+ CR HGD +LA
Sbjct: 367 FKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEV 426
Query: 417 VADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWV 469
A + + +SG VLLSN +++ ++K TG S +
Sbjct: 427 AAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 150/477 (31%), Positives = 227/477 (47%), Gaps = 40/477 (8%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
L+ Y + ++L VF P R A W+ +IS A L F++ML PD
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPD 203
Query: 123 DHILPTAAKSCAALSS-IHVGLSLHALALKTAYHLDVFVASSLVDMYAK----------- 170
+ + +C+A SS + G +HA+ LK + V +S++ Y K
Sbjct: 204 CYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMREL 263
Query: 171 --------------------CGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
GE A VF P +N+V+W+ MI GY + G+ E+ALR
Sbjct: 264 ESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALR 323
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
F +++ + V + F +VL C LL GK IHG F +V ++L++LY
Sbjct: 324 FFVEMM-KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLY 382
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
+KCG ++ A +AF ++ ++L WN ML A H ++ +L++ M + G+KP+ +TF
Sbjct: 383 AKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA-SGIKPDNVTF 441
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
+ +L CSH+GLVE+G FE M KDY I H M+D+ GR G L +A +
Sbjct: 442 IGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYS 501
Query: 391 MEPTE----SVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN-VLLSNXXXXXXXX 445
T+ S W LL C H TEL V+ +V + S ++ VLLSN
Sbjct: 502 SLVTDSSNNSSWETLLGACSTHWHTELGREVS-KVLKIAEPSEEMSFVLLSNLYCSTGRW 560
Query: 446 XXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
+ + ++G+KK G SW+E GN+V TF GD SH + E+ L L EM
Sbjct: 561 KEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEM 617
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 184/421 (43%), Gaps = 79/421 (18%)
Query: 75 SSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCA 134
S+ QVF+ P W+++++S+++ L A+ F Q+ PDD+ +CA
Sbjct: 22 SARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCA 81
Query: 135 ALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKC------------------GEIGY 176
+L ++ G + +L +++ + + V +SL+DMY KC E+ +
Sbjct: 82 SLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTW 141
Query: 177 ---------------ARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
A +VF EMP R +W+ MI G+ G+ E L LFK++L E +
Sbjct: 142 CSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML-ESEF 200
Query: 222 GVNDFTLSSVLRVCGA-STLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+ +T SS++ C A S+ + G+ +H K + S+ +S++S Y+K G+ + A
Sbjct: 201 KPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAM 260
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELF-------------------------- 314
+ E ++V WN+++ AC + T + E+F
Sbjct: 261 RELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ 320
Query: 315 ------EQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA- 367
E MKS GV + + VL+ACS L+ G+ M I G Q YA
Sbjct: 321 ALRFFVEMMKS--GVDSDHFAYGAVLHACSGLALLGHGK-----MIHGCLIHCGFQGYAY 373
Query: 368 ---TMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQ 424
+V+L + G +++A + ++ + S W +L +HG + A + D +
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLVS-WNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 425 G 425
G
Sbjct: 433 G 433
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 149/320 (46%), Gaps = 12/320 (3%)
Query: 53 LETIPLLS----HHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLAL 108
LE+I +L+ + +I+ K +L+VF+ +P ++ TW+++I+ + +N AL
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQAL 322
Query: 109 DFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMY 168
FF +M++ G+ D +C+ L+ + G +H + + +V ++LV++Y
Sbjct: 323 RFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLY 382
Query: 169 AKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTL 228
AKCG+I A F ++ ++++VSW+ M++ + G ++AL+L+ ++ + ++ T
Sbjct: 383 AKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDN-MIASGIKPDNVTF 441
Query: 229 SSVLRVCGASTLLELGKQIHGWCFKT-SFDSSCFVASSLISLYSKCGAVEGAYQ---AFE 284
+L C S L+E G I K + +I ++ + G + A +
Sbjct: 442 IGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYS 501
Query: 285 EL--QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGL 342
L N W +L AC+ H HT E+ + +K + L LY CS
Sbjct: 502 SLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLY-CSTGRW 560
Query: 343 VEKGQHYFELMKKDYGIEPG 362
E E++++ PG
Sbjct: 561 KEGEDVRREMVERGMKKTPG 580
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 38/287 (13%)
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
+S + AK G I AR VFD MP + V+W+ M+ Y +LG +EA+ LF Q L D
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ-LRFSDA 66
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
+D++ +++L C + ++ G++I ++ F +S V +SLI +Y KC A +
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 282 AFEEL--QVRNLGMWNAMLIA----------------------------CAQHAHTNR-- 309
F ++ RN W ++L A + HAH +
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 310 -TFELFEQMKSVGGVKPNFITFLCVLYACS-HAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
LF++M KP+ TF ++ ACS + V G+ +M K+ G +
Sbjct: 187 SCLSLFKEMLE-SEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKN 244
Query: 368 TMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
+++ + G DA++ +E + + T+ W +++ C G+TE A
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETEKA 290
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 227/467 (48%), Gaps = 7/467 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L +G + + G + + ++N Y K + + +F R W+++++
Sbjct: 132 LEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTG 191
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
FAQ A++F+R+M G D ++ ++ L +G S+H +T ++
Sbjct: 192 FAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMN 251
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
V V +SLVDMYAK G I A VF M + VSW +I G+ Q G +A F+ V+
Sbjct: 252 VVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA---FEAVVE 308
Query: 218 EEDVGVND--FTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
+ +G TL VL C L+ G+ +H + K A++L+ +YSKCGA
Sbjct: 309 MQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR-VTATALMDMYSKCGA 367
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
+ + + FE + ++L WN M+ H + LF +M ++P+ TF +L
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE-SNIEPDHATFASLLS 426
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTE 395
A SH+GLVE+GQH+F +M Y I+P +HY ++DLL RAG++++A+ +I ++
Sbjct: 427 ALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNAL 486
Query: 396 SVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKML 455
+W ALL+GC H + + A+++ + S G+ L+SN K++
Sbjct: 487 PIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLM 546
Query: 456 RDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
R+ ++K G S +E + TF D SH + + L L E+
Sbjct: 547 RNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEI 593
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 193/379 (50%), Gaps = 6/379 (1%)
Query: 35 SRSLRRGLQLHAHIIKTG-LETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSS 93
S+ R Q+HA +I TG L +S LI + + + +VF+ P R + ++S
Sbjct: 27 SKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNS 86
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
+I +++ P L + QM+ + PD K+C + + G ++ A+
Sbjct: 87 MIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFG 146
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
Y DVFV SS++++Y KCG++ A +F +M R+V+ W+ M+ G+ Q G+ +A+ ++
Sbjct: 147 YKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
+ + E G + + +L+ G ++G+ +HG+ ++T + V +SL+ +Y+K
Sbjct: 207 E-MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKV 265
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G +E A + F + + W +++ AQ+ N+ FE +M+S+ G +P+ +T + V
Sbjct: 266 GFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSL-GFQPDLVTLVGV 324
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
L ACS G ++ G+ + K + ++ + ++D+ + G L + ++ E + +
Sbjct: 325 LVACSQVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVGRKD 382
Query: 394 TESVWGALLTGCRIHGDTE 412
W +++ IHG+ +
Sbjct: 383 L-VCWNTMISCYGIHGNGQ 400
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 226/431 (52%), Gaps = 5/431 (1%)
Query: 40 RGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF-NSSPHRSATTWSSLISSF 98
+G H +I+ + + L++ Y K +L + + ++F S + W++++ +
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
+ ++ FR++ +G+ D + SC+ + ++ +G SLH +KT+ L +
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
V +SL+D+Y K G++ A +F E NV++W+ MI YV + E+A+ LF + +V
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDR-MVS 526
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
E+ + TL ++L C + LE G+ IH + +T + + ++++LI +Y+KCG +E
Sbjct: 527 ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEK 586
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
+ + F+ ++ WN M+ H LF+QM+ VKP TFL +L AC+
Sbjct: 587 SRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE-SDVKPTGPTFLALLSACT 645
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
HAGLVE+G+ F M + Y ++P +HY+ +VDLL R+G L++A + MP P +W
Sbjct: 646 HAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIW 704
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
G LL+ C HG+ E+ +A+R + G ++L+N +M+R+
Sbjct: 705 GTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRES 764
Query: 459 GIKKETGLSWV 469
G+ K G S V
Sbjct: 765 GVGKRAGHSVV 775
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 164/328 (50%), Gaps = 10/328 (3%)
Query: 25 ICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSP 84
+C+ L+L SLR+ +A II GL ++ LI+ Y+ PN S +VF+
Sbjct: 33 LCDQSLSL---ESLRKH---NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVT 86
Query: 85 HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS 144
R W+S+I + N +L FF ML G PD P +CA L HVG
Sbjct: 87 RRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTF 146
Query: 145 LHALALK-TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
+H L LK + + V +S V Y+KCG + A VFDEMP R+VV+W+ +I G+VQ G
Sbjct: 147 VHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNG 206
Query: 204 EDEEAL-RLFKQVLVEEDVG-VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
E E L L K DV N TL + C L+ G+ +HG+ K SS F
Sbjct: 207 ESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKF 266
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
V SS+ S YSK G AY +F EL ++ W +++ + A+ +F++F +M++
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN-K 325
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHY 349
G+ P+ + C++ LV +G+ +
Sbjct: 326 GMHPDGVVISCLINELGKMMLVPQGKAF 353
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 200/417 (47%), Gaps = 10/417 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N RT+ A ++ +L+ G LH +K GL + + + +FYSK+ P+ + F
Sbjct: 229 NPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSF 288
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+W+S+I+S A++ + D F +M G+ PD ++ + +
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVP 348
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGY 199
G + H ++ + LD V +SL+ MY K + A +F + N +W+ M+ GY
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 200 VQLGEDEEALRLFKQVLVEEDVG--VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
++ + + LF+++ +++G ++ + +SV+ C + LGK +H + KTS D
Sbjct: 409 GKMKCHVKCIELFRKI---QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
+ V +SLI LY K G + A++ F E N+ WNAM+ + + + LF++M
Sbjct: 466 LTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRM 524
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
S KP+ IT + +L AC + G +E+GQ + + E A ++D+ + G
Sbjct: 525 VS-ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCG 582
Query: 378 KLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
L+ + ++ + + W +++G +HGD E A + D++ E +G L
Sbjct: 583 HLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFL 638
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 5/324 (1%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS 92
+H ++ G LH +++KT L+ + + LI+ Y K + ++F + TW+
Sbjct: 444 SHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWN 502
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
++I+S+ + A+ F +M+ P L T +C S+ G +H +T
Sbjct: 503 AMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET 562
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
+ +++ ++++L+DMYAKCG + +R +FD ++ V W+ MI GY G+ E A+ LF
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALF 622
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
Q + E DV T ++L C + L+E GK++ + + S L+ L S+
Sbjct: 623 DQ-MEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSR 681
Query: 273 CGAVEGAYQAFEELQVRNLG-MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFL 331
G +E A + G +W +L +C H + E+ + + L
Sbjct: 682 SGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIML 741
Query: 332 CVLYACSHAGLVEKGQHYFELMKK 355
+Y S AG E+ + E+M++
Sbjct: 742 ANMY--SAAGKWEEAERAREMMRE 763
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 234 VCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGM 293
+C S LE ++ + + FVAS LIS Y+ G + + F + R++ +
Sbjct: 33 LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFL 92
Query: 294 WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELM 353
WN+++ A + R+ F M + G P+ T V+ AC+ G L+
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSML-LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 354 KKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTE 412
K G + + A+ V + G LQDA V +EMP + W A+++G +G++E
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIISGHVQNGESE 209
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ L+A ++ SL RG +H +I +T E LS LI+ Y+K S ++F++
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAG 594
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS-IHVG 142
+ A W+ +IS + + A+ F QM + + PT A LS+ H G
Sbjct: 595 NQKDAVCWNVMISGYGMHGDVESAIALFDQM------EESDVKPTGPTFLALLSACTHAG 648
Query: 143 LSLHALALKTAYH-LDVFVA----SSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMI 196
L L H DV S LVD+ ++ G + A + MP + V W ++
Sbjct: 649 LVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLL 708
Query: 197 YGYVQLGEDEEALRLFKQVLVEE 219
+ GE E +R+ ++ + +
Sbjct: 709 SSCMTHGEFEMGIRMAERAVASD 731
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 217/464 (46%), Gaps = 41/464 (8%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
R G Q+H + + LE L + L++ YSK + VF ++ + +W+SLI+
Sbjct: 292 REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGL 351
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
Q A + F +M P D+
Sbjct: 352 VQRKQISEAYELFEKM------PGK---------------------------------DM 372
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
+ ++ ++ GEI +F MP ++ ++W+ MI +V G EEAL F ++L +
Sbjct: 373 VSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKML-Q 431
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
++V N +T SSVL + L G QIHG K + + V +SL+S+Y KCG
Sbjct: 432 KEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTND 491
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
AY+ F + N+ +N M+ + + + +LF ++S G +PN +TFL +L AC
Sbjct: 492 AYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLES-SGKEPNGVTFLALLSACV 550
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
H G V+ G YF+ MK Y IEPG HYA MVDLLGR+G L DA +I MP +P VW
Sbjct: 551 HVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVW 610
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQ 458
G+LL+ + H +LA A ++ E S+ V+LS + + +
Sbjct: 611 GSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSK 670
Query: 459 GIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
IKK+ G SW+ VH F AGD S EI L+ + EM
Sbjct: 671 RIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 176/406 (43%), Gaps = 51/406 (12%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQN------------DLPHLALDF 110
+I+ Y++ + + QVF+ P R T+++++I++ +N D+P
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS 146
Query: 111 FRQML----RIGLLPDDHIL----PTAAKSCAALSSIHVGLSLHALALKTAYHL------ 156
+ M+ R G + L P + A S++ + L A A +
Sbjct: 147 YATMITGFVRAGRFDEAEFLYAETPVKFRDSVA-SNVLLSGYLRAGKWNEAVRVFQGMAV 205
Query: 157 -DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
+V SS+V Y K G I AR++FD M RNV++W+ MI GY + G E+ LF ++
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
E DV VN TL+ + + C G QIHG + + F+ +SL+S+YSK G
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
+ A F ++ ++ WN+++ Q + +ELFE+M + +++ ++
Sbjct: 326 MGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG-----KDMVSWTDMIK 380
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME--- 392
S G + K F +M + I + M+ G ++A+ +M +
Sbjct: 381 GFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 393 PTESVWGALLT----------GCRIHGDTELASYVADRVFEQGHVS 428
P + ++L+ G +IHG + V D + VS
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 9/222 (4%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + L A L GLQ+H ++K + + + L++ Y K N + ++F
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ + +++++IS ++ N AL F + G P+ +C + +
Sbjct: 497 SCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVD 556
Query: 141 VGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEM---PHRNVVSWSGM 195
+G + ++K++Y+++ + +VD+ + G + A N+ M PH V W +
Sbjct: 557 LGWK-YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGV--WGSL 613
Query: 196 IYG-YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCG 236
+ L D L K + +E D LS + + G
Sbjct: 614 LSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIG 655
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 229/438 (52%), Gaps = 11/438 (2%)
Query: 33 THSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS 92
+++ +R G +H +++ G + ++ ++FY K + S+ +VF P R+A +W+
Sbjct: 121 SNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWT 180
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
+L+ ++ ++ A F M L + ++ KS +++ +
Sbjct: 181 ALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKL--------FDE 232
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
D+ +S++D YAK G++ AR++F+E +V +WS +I GY Q G+ EA ++F
Sbjct: 233 MPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF-KTSFDSSCFVASSLISLYS 271
+ + ++V ++F + ++ C EL +++ + + + SS +V +LI + +
Sbjct: 293 SE-MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNA 351
Query: 272 KCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFL 331
KCG ++ A + FEE+ R+L + +M+ A H + LFE+M G+ P+ + F
Sbjct: 352 KCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVD-EGIVPDEVAFT 410
Query: 332 CVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPM 391
+L C + LVE+G YFELM+K Y I HY+ +V+LL R GKL++A ++I+ MP
Sbjct: 411 VILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPF 470
Query: 392 EPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXX 451
E S WG+LL GC +HG+TE+A VA +FE S+G VLLSN
Sbjct: 471 EAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHL 530
Query: 452 XKMLRDQGIKKETGLSWV 469
+ + GI K G SW+
Sbjct: 531 RDKMNENGITKICGRSWI 548
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 190/392 (48%), Gaps = 23/392 (5%)
Query: 43 QLHAHIIKTGLETIP-LLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQN 101
Q+HA II+ GLE L+S + + S + + S VF P W+ LI ++
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 102 DLPHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
L + +M+R GL PD++ P K C+ + VG S+H L L+ + DV V
Sbjct: 88 FLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVV 147
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
+S VD Y KC ++ AR VF EMP RN VSW+ ++ YV+ GE EEA +F ++ E +
Sbjct: 148 GTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF-DLMPERN 206
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+G + + +++ + L+ K F +S+I Y+K G + A
Sbjct: 207 LGSWNALVDGLVK---SGDLVNAKK-----LFDEMPKRDIISYTSMIDGYAKGGDMVSAR 258
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
FEE + ++ W+A+++ AQ+ N F++F +M VKP+ + ++ ACS
Sbjct: 259 DLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM-CAKNVKPDEFIMVGLMSACSQM 317
Query: 341 G---LVEKGQHYFELMKKDYGIEPGSQHYAT--MVDLLGRAGKLQDAVQVIEEMPMEPTE 395
G L EK Y + S HY ++D+ + G + A ++ EEMP
Sbjct: 318 GCFELCEKVDSYLHQRMNKF-----SSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLV 372
Query: 396 SVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
S + +++ G IHG A + +++ ++G V
Sbjct: 373 S-YCSMMEGMAIHGCGSEAIRLFEKMVDEGIV 403
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 248/540 (45%), Gaps = 74/540 (13%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
H +I+ GL+ + + L+ Y K + +F P R+ +W+ +I F+Q
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 104 PHLALDFFRQMLRIGLLPDD-----------------------HILPTAAKS-------- 132
A+ F M R PD+ H++ + +
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 133 ----CAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRN 188
CA L ++ + +H +K + + ++L+ +Y K G++ A ++F ++ ++
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 189 VVSWSGMIYGYVQLGEDEEALRLFKQV--------------------------------- 215
+ SW+ +I +V G+ +EAL LF ++
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 216 -----LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
+ V N T+ +L +C L LG++IHG +TS + V ++L+++Y
Sbjct: 420 EYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMY 479
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
+KCG + FE ++ ++L WN+++ H + +F++M S G P+ I
Sbjct: 480 AKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMIS-SGFHPDGIAL 538
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
+ VL ACSHAGLVEKG+ F M K +G+EP +HYA +VDLLGR G L++A ++++ MP
Sbjct: 539 VAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Query: 391 MEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXX 450
MEP V GALL CR+H + ++A +A ++ +G +LLSN
Sbjct: 599 MEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESAN 658
Query: 451 XXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVAD 510
+ + + +KK +G SW+E + + F++G ++ IY LE+L M K G D
Sbjct: 659 VRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 200/480 (41%), Gaps = 78/480 (16%)
Query: 27 NHLLALTHSRSLRRGLQLHAHIIKTG-LETIPLLSHHLINFYSKTQLPNSSLQVFNSSPH 85
+HLL L + R Q+HA ++ + + L+ +LI+ Y++ L + VF +
Sbjct: 60 DHLLGLCLTAQQCR--QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSL 117
Query: 86 ---RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
W+S++ + + L AL+ +R M + GL D +ILP ++C L +
Sbjct: 118 VLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC 177
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
+ H ++ ++ V + L+ +Y K G +G A N+F EMP RN +SW+ MI G+ Q
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 203 GEDEEALRLFKQVLVE----------------------EDV------------GVNDFTL 228
+ E A+++F+ + E EDV V+ L
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 229 SSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV 288
+ VC L + +++HG+ K F+ ++LI +Y K G V+ A F +++
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 289 RNLGMWNAMLIACAQHAHTNRTFELF---EQMKSVGGVKPNFITFLCVLYACSHAGLVEK 345
+ + WN+++ + + LF E+M V VK N +T+ V+ C+ G +
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 346 GQHYF-----------------------ELMKKDYGIEPGSQHYAT-----------MVD 371
YF EL + G E T +V+
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 372 LLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGL 431
+ + G L + V E + + S W +++ G +HG E A + DR+ G G+
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLIS-WNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 20 GNYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQV 79
N TIC L +L G ++H H+I+T + L+ + L+N Y+K L + V
Sbjct: 432 ANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLV 491
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F + + +W+S+I + + AL F +M+ G PD L +C+ +
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 140 HVGLSL-HALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP 185
G + ++++ + + +VD+ + G + A + MP
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 214/418 (51%), Gaps = 11/418 (2%)
Query: 58 LLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRI 117
LLS L++ Y K ++ VF+ ++ +W+++IS N + +D FR M R
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 118 GLLPDDHILPTAAKSCAALSSIHVGLSL----HALALKTAYHLDVFVASSLVDMYAKCGE 173
L P+ L + +C L + G SL H + + H D + ++ + MY +CG
Sbjct: 246 NLRPNRVTLLSVLPACVEL---NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGN 302
Query: 174 IGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLR 233
+ +R +F+ R+VV WS MI GY + G+ E + L Q + +E + N TL +++
Sbjct: 303 VSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ-MRKEGIEANSVTLLAIVS 361
Query: 234 VCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGM 293
C STLL +H K F S + ++LI +Y+KCG++ A + F EL ++L
Sbjct: 362 ACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVS 421
Query: 294 WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELM 353
W++M+ A H H + E+F+ M GG + + + FL +L AC+HAGLVE+ Q F
Sbjct: 422 WSSMINAYGLHGHGSEALEIFKGMIK-GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQA 480
Query: 354 KKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTEL 413
K Y + +HYA ++LLGR GK+ DA +V MPM+P+ +W +LL+ C HG ++
Sbjct: 481 GK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 414 A-SYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
A +A+ + + + VLLS ++++ + + K G S +E
Sbjct: 540 AGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 192/393 (48%), Gaps = 15/393 (3%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G QLH +K G + ++S+ LI+ Y+K + +VF+ HR ++ S+I+S Q
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAAL-SSIHVGLSLHALAL-KTAYHLDV 158
+ L + A+ ++M G +P ++ + C + SS V HAL L V
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESV 185
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
++++LVDMY K + A +VFD+M +N VSW+ MI G V E + LF+ +
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFR-AMQR 244
Query: 219 EDVGVNDFTLSSVLRVC-----GASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
E++ N TL SVL C G+S L K+IHG+ F+ + + ++ +++Y +C
Sbjct: 245 ENLRPNRVTLLSVLPACVELNYGSS----LVKEIHGFSFRHGCHADERLTAAFMTMYCRC 300
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G V + FE +VR++ MW++M+ A+ + L QM+ G++ N +T L +
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRK-EGIEANSVTLLAI 359
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
+ AC+++ L+ + K G ++D+ + G L A +V E+ +
Sbjct: 360 VSACTNSTLLSFASTVHSQILK-CGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 394 TESVWGALLTGCRIHGDTELASYVADRVFEQGH 426
S W +++ +HG A + + + GH
Sbjct: 419 LVS-WSSMINAYGLHGHGSEALEIFKGMIKGGH 450
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 4/289 (1%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
++H + G L+ + Y + + S +F +S R WSS+IS +A+
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
++ QM + G+ + L +C + + ++H+ LK + + + +
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
+L+DMYAKCG + AR VF E+ +++VSWS MI Y G EAL +FK +++
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG-MIKGGHE 451
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
V+D ++L C + L+E + I K + + I+L + G ++ A++
Sbjct: 452 VDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 283 FEELQVR-NLGMWNAMLIACAQHAHTNRTFELF--EQMKSVGGVKPNFI 328
+ ++ + +W+++L AC H + ++ E MKS N++
Sbjct: 512 TINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYV 560
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 152/318 (47%), Gaps = 16/318 (5%)
Query: 125 ILPTAAKSCA-ALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDE 183
ILP+ K+CA +G LH L LK D V++SL+ MYAK R VFDE
Sbjct: 48 ILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDE 107
Query: 184 MPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVC---GASTL 240
M HR+ VS+ +I Q G EA++L K++ + ++ ++S+L +C G+S+
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL-VASLLALCTRMGSSS- 165
Query: 241 LELGKQIHGWCF-KTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLI 299
++ + H S ++++L+ +Y K A+ F++++V+N W AM+
Sbjct: 166 -KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMIS 224
Query: 300 ACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC---SHAGLVEKGQHYFELMKKD 356
C + + +LF M+ ++PN +T L VL AC ++ + K H F
Sbjct: 225 GCVANQNYEMGVDLFRAMQR-ENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSF---R 280
Query: 357 YGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASY 416
+G + A + + R G + + +V+ E +W ++++G GD
Sbjct: 281 HGCHADERLTAAFMTMYCRCGNVSLS-RVLFETSKVRDVVMWSSMISGYAETGDCSEVMN 339
Query: 417 VADRVFEQGHVSSGLNVL 434
+ +++ ++G ++ + +L
Sbjct: 340 LLNQMRKEGIEANSVTLL 357
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 13/220 (5%)
Query: 20 GNYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQV 79
N T+ + A T+S L +H+ I+K G + LL + LI+ Y+K +++ +V
Sbjct: 351 ANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREV 410
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F + +WSS+I+++ + AL+ F+ M++ G DD +C
Sbjct: 411 FYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACN----- 465
Query: 140 HVGLSLHALALKT---AYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWS 193
H GL A + T YH+ V + + +++ + G+I A V MP + + WS
Sbjct: 466 HAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWS 525
Query: 194 GMIYGYVQLGEDEEALRLFKQVLV--EEDVGVNDFTLSSV 231
++ G + A ++ L+ E D N LS +
Sbjct: 526 SLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKI 565
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 210/425 (49%), Gaps = 37/425 (8%)
Query: 80 FNSSPHRSATTWSSL---ISSFAQNDLPHLALDFFRQMLRIGLLP-DDHILPTAAKSCAA 135
+SS S T SL +SS+A AL+ F QM LP D H+ A KSCAA
Sbjct: 1 MSSSYASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAA 60
Query: 136 LSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGM 195
+G S+HA ++K+ + + FV +L+DMY KC + +AR +FDE+P RN V W+ M
Sbjct: 61 AFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAM 120
Query: 196 IYGYVQLGEDEEALRLFKQV-----------LVEEDVGVND------------------- 225
I Y G+ +EA+ L++ + +++ VG D
Sbjct: 121 ISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKP 180
Query: 226 --FTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
TL +++ C A L K+IH + F+ + + S L+ Y +CG++ F
Sbjct: 181 NLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF 240
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
+ ++ R++ W++++ A A H + F++M+ + V P+ I FL VL ACSHAGL
Sbjct: 241 DSMEDRDVVAWSSLISAYALHGDAESALKTFQEME-LAKVTPDDIAFLNVLKACSHAGLA 299
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
++ YF+ M+ DYG+ HY+ +VD+L R G+ ++A +VI+ MP +PT WGALL
Sbjct: 300 DEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLG 359
Query: 404 GCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKE 463
CR +G+ ELA A + + VLL +++ G+K
Sbjct: 360 ACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVS 419
Query: 464 TGLSW 468
G SW
Sbjct: 420 PGSSW 424
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 12/193 (6%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
++H++ + +E P L L+ Y + VF+S R WSSLIS++A +
Sbjct: 203 EIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHG 262
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
AL F++M + PDD K+C+ H GL+ AL D + +
Sbjct: 263 DAESALKTFQEMELAKVTPDDIAFLNVLKACS-----HAGLADEALVYFKRMQGDYGLRA 317
Query: 163 S------LVDMYAKCGEIGYARNVFDEMPHRNVV-SWSGMIYGYVQLGEDEEALRLFKQV 215
S LVD+ ++ G A V MP + +W ++ GE E A +++
Sbjct: 318 SKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAAREL 377
Query: 216 LVEEDVGVNDFTL 228
L+ E ++ L
Sbjct: 378 LMVEPENPANYVL 390
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 209/447 (46%), Gaps = 41/447 (9%)
Query: 53 LETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFR 112
+E +L +IN Y + S+ + F+ SP R W+++IS + + A F
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 113 QMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCG 172
QM C DV +++++ YA G
Sbjct: 115 QM-----------------PCR----------------------DVMSWNTVLEGYANIG 135
Query: 173 EIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVL 232
++ VFD+MP RNV SW+G+I GY Q G E L FK+++ E V ND T++ VL
Sbjct: 136 DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 195
Query: 233 RVCGASTLLELGKQIHGWCFKTSFDS-SCFVASSLISLYSKCGAVEGAYQAFEELQVRNL 291
C + GK +H + ++ V ++LI +Y KCGA+E A + F+ ++ R+L
Sbjct: 196 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDL 255
Query: 292 GMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFE 351
WN M+ A H H LF +MK+ G+ P+ +TF+ VL AC H GLVE G YF
Sbjct: 256 ISWNTMINGLAAHGHGTEALNLFHEMKN-SGISPDKVTFVGVLCACKHMGLVEDGLAYFN 314
Query: 352 LMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDT 411
M D+ I P +H +VDLL RAG L AV+ I +MP++ +W LL +++
Sbjct: 315 SMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKV 374
Query: 412 ELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEE 471
++ + + + + V+LSN +RD G KKE G+SW+E
Sbjct: 375 DIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIET 434
Query: 472 GNRVHTFAAGDRSHAKTVEIYNKLEEL 498
+ + F + H +T E+ L EL
Sbjct: 435 DDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 30/256 (11%)
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L M G I A VF EM +NVV W+ MI GY+ L +D + R + + E D+
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYL-LNKDLVSARRYFDLSPERDI-- 90
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS----SCFVASSLISLYSKCGAVEGA 279
VL S +E+G + ++ FD ++++ Y+ G +E
Sbjct: 91 -------VLWNTMISGYIEMGNMLEA---RSLFDQMPCRDVMSWNTVLEGYANIGDMEAC 140
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSH 339
+ F+++ RN+ WN ++ AQ+ + F++M G V PN T VL AC+
Sbjct: 141 ERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAK 200
Query: 340 AGLVEKGQ---HYFELM---KKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
G + G+ Y E + K D ++ ++D+ G+ G ++ A++V + +
Sbjct: 201 LGAFDFGKWVHKYGETLGYNKVDVNVKNA------LIDMYGKCGAIEIAMEVFKGIKRRD 254
Query: 394 TESVWGALLTGCRIHG 409
S W ++ G HG
Sbjct: 255 LIS-WNTMINGLAAHG 269
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 242/487 (49%), Gaps = 74/487 (15%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRI--GLLPDDHILPTAAKSCAA 135
++F P R+ +W+++IS FA N+L AL F +M + + P+ L + A +C
Sbjct: 252 RLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGG 311
Query: 136 LSS--IHVGLSLHALALKTAYHL---DVFVASSLVDMYAKCGEIGYARNVFDE---MPHR 187
L +G LHA + + D +A SLV MYA G I A+++ +E +
Sbjct: 312 LGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC 371
Query: 188 NV---------------------------VSWSGMIYGYVQLGEDEEALRLFKQV----- 215
N+ VSW+ MI GY++ G+ A LF+++
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431
Query: 216 ---------LVEEDV--------------GVNDF--TLSSVLRVCGASTLLELGKQIHGW 250
LV+ ++ G+ T S +L GA++ L+ GK IH
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 251 CFKTS--FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTN 308
KT+ +D + +SL+S+Y+KCGA+E AY+ F ++ ++ WN+M++ + H +
Sbjct: 492 IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLAD 551
Query: 309 RTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYAT 368
+ LF++M G KPN +TFL VL ACSH+GL+ +G F+ MK+ Y I+PG HY +
Sbjct: 552 KALNLFKEMLD-SGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS 610
Query: 369 MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIH---GDTE-LASYVADRVFEQ 424
M+DLLGRAGKL++A + I +P P +V+GALL C ++ D E +A A R+ E
Sbjct: 611 MIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLEL 670
Query: 425 GHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRS 484
V++ +V L N K + +G+KK G SWV R + F +GD+S
Sbjct: 671 DPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKS 730
Query: 485 HAKTVEI 491
++ ++
Sbjct: 731 ASEAAQM 737
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+I+ Y + + + +F + TW+ +IS QN+L A M+R GL P
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTA--YHLDVFVASSLVDMYAKCGEIGYARNV 180
+ S A S++ G +H + KT Y D+ + +SLV MYAKCG I A +
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Query: 181 FDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTL 240
F +M ++ VSW+ MI G G ++AL LFK++L + N T VL C S L
Sbjct: 526 FAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML-DSGKKPNSVTFLGVLSACSHSGL 584
Query: 241 LELGKQI 247
+ G ++
Sbjct: 585 ITRGLEL 591
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 171/426 (40%), Gaps = 76/426 (17%)
Query: 76 SLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAA 135
++++F+ P R+ +W++L++ +N A F M P ++ A
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM------PSRDVVSWNAMIKGY 210
Query: 136 LSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGM 195
+ + G+ L +V +S+V Y + G++ A +F EMP RN+VSW+ M
Sbjct: 211 IE--NDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 196 IYGYVQLGEDEEALRLFKQVLVEED-VGVNDFTLSSVLRVCG--ASTLLELGKQIH---- 248
I G+ EAL LF ++ + D V N TL S+ CG LG+Q+H
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVI 328
Query: 249 --GW-----------CFKTSFDSSCFVASS---------------LISLYSKCGAVEGAY 280
GW + SS +AS+ +I+ Y K G +E A
Sbjct: 329 SNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAE 388
Query: 281 QAFEELQ-VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV---------------- 323
FE ++ + + W +M+ + +R F LF+++ GV
Sbjct: 389 TLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFA 448
Query: 324 --------------KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGI-EPGSQHYAT 368
KP T+ +L + +++G+H ++ K +P +
Sbjct: 449 EAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNS 508
Query: 369 MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVS 428
+V + + G ++DA ++ +M + T S W +++ G HG + A + + + G
Sbjct: 509 LVSMYAKCGAIEDAYEIFAKMVQKDTVS-WNSMIMGLSHHGLADKALNLFKEMLDSGKKP 567
Query: 429 SGLNVL 434
+ + L
Sbjct: 568 NSVTFL 573
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
++ ++++ Y KC + A +F EMP +NVVSW+ M+ G E+A+ LF ++
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 217 VEEDVGVNDFTL-----------SSVLRVCGASTLLELGKQIHGWC-----------FKT 254
V N V + ++ I G+ F
Sbjct: 166 ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGD 225
Query: 255 SFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELF 314
+ + +S++ Y + G V AY+ F E+ RN+ W AM+ A + LF
Sbjct: 226 MSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLF 285
Query: 315 EQM-KSVGGVKPNFITFLCVLYACSHAGL 342
+M K V V PN T + + YAC G+
Sbjct: 286 LEMKKDVDAVSPNGETLISLAYACGGLGV 314
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 35/242 (14%)
Query: 172 GEIGYARNVFDEMPHRN----VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFT 227
G + +AR++ D++P R VV W+ ++ Y + G +EA LF +V+ E ++ +
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLF-EVMPERNIVTCNAM 114
Query: 228 LSSVL---RVCGASTLL-ELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
L+ + R+ A TL E+ K + W + +++ G E A + F
Sbjct: 115 LTGYVKCRRMNEAWTLFREMPKNVVSW-------------TVMLTALCDDGRSEDAVELF 161
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
+E+ RN+ WN ++ ++ + ++F+ M S V N + G +
Sbjct: 162 DEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI----------KGYI 211
Query: 344 EK-GQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
E G +L+ D E + +MV R G +++A ++ EMP E W A++
Sbjct: 212 ENDGMEEAKLLFGDMS-EKNVVTWTSMVYGYCRYGDVREAYRLFCEMP-ERNIVSWTAMI 269
Query: 403 TG 404
+G
Sbjct: 270 SG 271
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIP--LLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWS 92
+ +L +G +H I KT P +L + L++ Y+K + ++F + +W+
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWN 538
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
S+I + + L AL+ F++ML G P+ +C+ I GL L A+K
Sbjct: 539 SMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFK-AMKE 597
Query: 153 AYHLDVFVAS--SLVDMYAKCGEIGYARNVFDEMP 185
Y + + S++D+ + G++ A +P
Sbjct: 598 TYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 226/457 (49%), Gaps = 14/457 (3%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N TI AL + +LR G +H + + G ++ +++ Y+K++ + +VF
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDD--HILPTAA----KSCA 134
+ ++ TWS++I + +N++ A + F QML + D+ + P A CA
Sbjct: 264 DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML----VNDNVAMVTPVAIGLILMGCA 319
Query: 135 ALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSG 194
+ G +H A+K + LD+ V ++++ YAK G + A F E+ ++V+S++
Sbjct: 320 RFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNS 379
Query: 195 MIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT 254
+I G V EE+ RLF + + + + TL VL C L G HG+C
Sbjct: 380 LITGCVVNCRPEESFRLFHE-MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVH 438
Query: 255 SFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELF 314
+ + + ++L+ +Y+KCG ++ A + F+ + R++ WN ML H LF
Sbjct: 439 GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 315 EQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKK-DYGIEPGSQHYATMVDLL 373
M+ G V P+ +T L +L ACSH+GLV++G+ F M + D+ + P HY M DLL
Sbjct: 499 NSMQETG-VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLL 557
Query: 374 GRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNV 433
RAG L +A + +MP EP V G LL+ C + + EL + V+ ++ G + L V
Sbjct: 558 ARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESL-V 616
Query: 434 LLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
LLSN + + +G+ K G SWV+
Sbjct: 617 LLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 190/378 (50%), Gaps = 9/378 (2%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
R++ G +H+H+ + T + L++FY+K +++VF+ P R W+++I
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 96 SSFAQNDLPHLALDFFRQMLRI-GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
S F+ + + F M RI GL P+ + + ++ G ++H + +
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
D+ V + ++D+YAK I YAR VFD +N V+WS MI GYV+ +EA +F Q
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQ 296
Query: 215 VLVEEDVG-VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
+LV ++V V + +L C L G+ +H + K F V +++IS Y+K
Sbjct: 297 MLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKY 356
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G++ A++ F E+ ++++ +N+++ C + +F LF +M++ G++P+ T L V
Sbjct: 357 GSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT-SGIRPDITTLLGV 415
Query: 334 LYACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPM 391
L ACSH + G H + ++ +G + ++D+ + GKL A +V + M
Sbjct: 416 LTACSHLAALGHGSSCHGYCVV---HGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK 472
Query: 392 EPTESVWGALLTGCRIHG 409
S W +L G IHG
Sbjct: 473 RDIVS-WNTMLFGFGIHG 489
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 189/386 (48%), Gaps = 14/386 (3%)
Query: 35 SRSLRRGLQLHAHIIKTGLE-TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR--SATTW 91
SR+L G +H H++K L + + +L Y+ + VF+ PH + W
Sbjct: 12 SRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAW 71
Query: 92 SSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALK 151
+I ++A ND ALD + +ML G+ P + P K+CA L +I G +H+
Sbjct: 72 DLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNC 131
Query: 152 TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRL 211
+ + D++V ++LVD YAKCGE+ A VFDEMP R++V+W+ MI G+ + + L
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 212 FKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYS 271
F + + + N T+ + G + L GK +HG+C + F + V + ++ +Y+
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 272 KCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM---KSVGGVKPNFI 328
K + A + F+ +N W+AM+ ++ E+F QM +V V P I
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 329 TFLCVLYACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
+L C+ G + G+ H + + K + ++ Q+ T++ + G L DA +
Sbjct: 312 GL--ILMGCARFGDLSGGRCVHCYAV-KAGFILDLTVQN--TIISFYAKYGSLCDAFRQF 366
Query: 387 EEMPMEPTESVWGALLTGCRIHGDTE 412
E+ ++ S + +L+TGC ++ E
Sbjct: 367 SEIGLKDVIS-YNSLITGCVVNCRPE 391
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 230/453 (50%), Gaps = 8/453 (1%)
Query: 41 GLQLHAHIIKT-GLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
G +HA II + L +PL + L++ Y + VF + + +W+S+IS +
Sbjct: 319 GKLIHARIIVSDSLADLPL-DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 100 QNDLPHLALDFFRQMLRIGL-LPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
+N A+ +R++LR+ PD++ A + A G LH K Y V
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
FV ++L+ MY K E A+ VFD M R+VV W+ MI G+ +LG E A++ F ++ E
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE 497
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
++ + F+LSSV+ C +L G+ H +T FD V +L+ +Y K G E
Sbjct: 498 KNRS-DGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYET 556
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A F +L WN+ML A +QH + FEQ+ G P+ +T+L +L ACS
Sbjct: 557 AETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE-NGFMPDAVTYLSLLAACS 615
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES-V 397
H G +G+ + MK+ GI+ G +HY+ MV+L+ +AG + +A+++IE+ P ++ +
Sbjct: 616 HRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAEL 674
Query: 398 WGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRD 457
W LL+ C + ++ Y A+++ + + ++LLSN + +R
Sbjct: 675 WRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRG 734
Query: 458 QGIKKETGLSWVE-EGNRVHTFAAGDRSHAKTV 489
K+ GLSW+E N F++GD+S+ + V
Sbjct: 735 LASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVV 767
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 186/394 (47%), Gaps = 3/394 (0%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G L++ IIK G ++ ++ YS S+ ++F+ +R A W+++I +
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
ND L FFR ML G+ P C+ L S +G +HA + + D+ +
Sbjct: 278 NDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL 337
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
++L+DMY CG++ A VF + + N+VSW+ +I G + G E+A+ +++++L
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMST 397
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+++T S+ + GK +HG K ++ S FV ++L+S+Y K E A
Sbjct: 398 PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQ 457
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
+ F+ ++ R++ +W M++ ++ ++ + F +M F + V+ ACS
Sbjct: 458 KVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF-SLSSVIGACSDM 516
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
++ +G+ F + G + +VD+ G+ GK + A + I + P W +
Sbjct: 517 AMLRQGE-VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNS 574
Query: 401 LLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
+L HG E A +++ E G + + L
Sbjct: 575 MLGAYSQHGMVEKALSFFEQILENGFMPDAVTYL 608
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 192/400 (48%), Gaps = 7/400 (1%)
Query: 38 LRRGLQLHAHIIKTGLETI---PLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
L+R Q+HA ++ G P +++LI+ Y + + +VF+ PHR+ ++++L
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNAL 169
Query: 95 ISSFAQN-DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
S++++N D A M + P+ + + CA L + +G SL++ +K
Sbjct: 170 YSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLG 229
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
Y +V V +S++ MY+ CG++ AR +FD + +R+ V+W+ MI G ++ + E+ L F+
Sbjct: 230 YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
+L+ V FT S VL C LGK IH + + + ++L+ +Y C
Sbjct: 290 NMLM-SGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSC 348
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G + A+ F + NL WN+++ C+++ + ++ ++ + +P+ TF
Sbjct: 349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEP 393
+ A + G+ + K G E T++ + + + + A +V + M E
Sbjct: 409 ISATAEPERFVHGKLLHGQVTK-LGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK-ER 466
Query: 394 TESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNV 433
+W ++ G G++ELA ++ + + S G ++
Sbjct: 467 DVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSL 506
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 168/380 (44%), Gaps = 22/380 (5%)
Query: 57 PLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLR 116
P +++LI+ Y + + +VF+ P R+ T L + F + + Q+++
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVF---EYVSMGSSLHSQIIK 78
Query: 117 IG------LLPDDHILPTA---AKSCAALSSIHVGLSLHALALKT---AYHLDVFVASSL 164
+G +P + I + + C +++ + +HAL L A + ++L
Sbjct: 79 LGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL 138
Query: 165 VDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVN 224
+ MY +CG + AR VFD+MPHRNVVS++ + Y + + + E V N
Sbjct: 139 ISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 225 DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFE 284
T +S+++VC + +G ++ K + + V +S++ +YS CG +E A + F+
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 285 ELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVE 344
+ R+ WN M++ ++ F M + GV P T+ VL CS G
Sbjct: 259 CVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML-MSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 345 KGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
G+ H ++ P ++D+ G +++A V + P W +++
Sbjct: 318 LGKLIHARIIVSDSLADLPLDN---ALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSII 373
Query: 403 TGCRIHGDTELASYVADRVF 422
+GC +G E A + R+
Sbjct: 374 SGCSENGFGEQAMLMYRRLL 393
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
LR+G H I+TG + + + L++ Y K ++ +F+ + + W+S++ +
Sbjct: 519 LRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGA 578
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
++Q+ + AL FF Q+L G +PD + +C+ S G L +
Sbjct: 579 YSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAG 638
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRN 188
S +V++ +K G + A + ++ P N
Sbjct: 639 FKHYSCMVNLVSKAGLVDEALELIEQSPPGN 669
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 199/383 (51%), Gaps = 33/383 (8%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
Q+H IIK L LL LI+ S + VFN S TW+ +I S + N
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 103 LPHLALDFF-RQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
P AL F M+ D P K+C A SSI +G +H LA+K + DVF
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQ 157
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG----------------------- 198
++L+D+Y KCG+ R VFD+MP R++VSW+ M+YG
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 199 --------YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGW 250
YV+ +EA +LF+++ V+ DV N+FT+ ++L+ L +G+ +H +
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 251 CFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRT 310
K F CF+ ++LI +YSKCG+++ A + F+ +Q ++L WN+M+ + H
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
LFE+M+ V+P+ ITF+ VL AC++ G V+ G YF M + YGI P +H A M+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 371 DLLGRAGKLQDAVQVIEEMPMEP 393
LL +A +++ A ++E M +P
Sbjct: 397 QLLEQALEVEKASNLVESMDSDP 419
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 37/315 (11%)
Query: 131 KSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVV 190
++C+ S + +H +K D + L+ + + GE YA VF+++ +
Sbjct: 28 RTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTF 84
Query: 191 SWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGW 250
+W+ MI + EAL LF +++ + FT V++ C AS+ + LG Q+HG
Sbjct: 85 TWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGL 144
Query: 251 CFKTSFDSSCFVASSLISLYSKCGA-------------------------------VEGA 279
K F + F ++L+ LY KCG ++ A
Sbjct: 145 AIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSA 204
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSH 339
F ++ +RN+ W AM+ A ++ + F+LF +M+ V VKPN T + +L A +
Sbjct: 205 EIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQ-VDDVKPNEFTIVNLLQASTQ 263
Query: 340 AGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWG 399
G + G+ + K+ G ++D+ + G LQDA +V + M + + + W
Sbjct: 264 LGSLSMGRWVHDYAHKN-GFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGK-SLATWN 321
Query: 400 ALLTGCRIHGDTELA 414
+++T +HG E A
Sbjct: 322 SMITSLGVHGCGEEA 336
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 209/409 (51%), Gaps = 35/409 (8%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
++N YSK L + ++F+ + +W ++I + + AL ++ +MLR G+ P
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYA------------- 169
+ ++ + A GL LH +K + F+ ++++ YA
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 170 ------------------KCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRL 211
K G + AR VFD+ +++ SW+ MI GY Q + AL L
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 212 FKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYS 271
F++++ V + T+ SV + LE GK+ H + ++ + + +++I +Y+
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 272 KCGAVEGAYQAFEE---LQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
KCG++E A F + + + WNA++ A H H +L+ ++S+ +KPN I
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLP-IKPNSI 543
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
TF+ VL AC HAGLVE G+ YFE MK D+GIEP +HY MVDLLG+AG+L++A ++I++
Sbjct: 544 TFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKK 603
Query: 389 MPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSN 437
MP++ +WG LL+ R HG+ E+A A + G V+LSN
Sbjct: 604 MPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSN 652
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 213/487 (43%), Gaps = 97/487 (19%)
Query: 23 RTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSS------ 76
R + + L + S + G Q+H ++K+GL++ + + ++N Y+K +L +
Sbjct: 42 RALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRD 101
Query: 77 -------------------------LQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFF 111
L++F+ P RS ++++LI +AQN+ A++ F
Sbjct: 102 HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELF 161
Query: 112 RQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKC 171
R+M +G++ ++ L T +C+ L I L +LA+K VFV+++L+ MY C
Sbjct: 162 REMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 172 GEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSV 231
+ AR +FDEMP RN+V+W+ M+ GY + G E+A LF Q+ E+D+ +
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI-TEKDIVSWGTMIDGC 280
Query: 232 LRV---------------CGAS----TLLEL------------GKQIHGWCFKTSFDSSC 260
LR CG +++L G Q+HG K FD
Sbjct: 281 LRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYD 340
Query: 261 FVASSLISLYS-------------------------------KCGAVEGAYQAFEELQVR 289
F+ +++I Y+ K G VE A + F++ +
Sbjct: 341 FLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDK 400
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHY 349
++ WNAM+ AQ LF +M S VKP+ IT + V A S G +E+G+
Sbjct: 401 DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRA 460
Query: 350 FELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP--MEPTESVWGALLTGCRI 407
+ + I P A ++D+ + G ++ A+ + + T S W A++ G
Sbjct: 461 HDYLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 408 HGDTELA 414
HG +LA
Sbjct: 520 HGHAKLA 526
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 228 LSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ 287
L S L C +S + G+QIH K+ DS+ ++ +S++++Y+KC + A F +
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 288 --------------VRNLGMWNAMLI-------AC----------AQHAHTNRTFELFEQ 316
VR+ +W+A+ + +C AQ+ + ELF +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
M+++ G+ N +T V+ ACSH G + + L K +E ++ +
Sbjct: 164 MRNL-GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIK-LKLEGRVFVSTNLLHMYCLC 221
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSG 430
L+DA ++ +EMP E W +L G G E A + D++ E+ VS G
Sbjct: 222 LCLKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 274
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 234/450 (52%), Gaps = 22/450 (4%)
Query: 32 LTHSRSLRRGLQLHAHIIKTGLE--TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSAT 89
++ +SL+ Q+HA II GL T PL L++ S L + +L + P+ S
Sbjct: 16 ISKCKSLQNLKQIHAQIITIGLSHHTYPL--SKLLHLSSTVCL-SYALSILRQIPNPSVF 72
Query: 90 TWSSLISSFAQN---DLPHLALDFFRQML--RIGLL-PDDHILPTAAKSCAALSSIHV-G 142
+++LISS N HLA + Q+L R + P++ P+ K+ + H G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 143 LSLHALALK--TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
+LHA LK + D FV ++LV YA CG++ AR++F+ + ++ +W+ ++ Y
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 201 ---QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
++ DEE L LF ++ V N+ +L ++++ C G H + K +
Sbjct: 193 NSEEIDSDEEVLLLFMRMQVRP----NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
+ FV +SLI LYSKCG + A + F+E+ R++ +NAM+ A H EL++ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
S G V P+ TF+ + ACSH+GLV++G F MK YGIEP +HY +VDLLGR+G
Sbjct: 309 ISQGLV-PDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 378 KLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSN 437
+L++A + I++MP++P ++W + L + HGD E + +SG VLLSN
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSN 427
Query: 438 XXXXXXXXXXXXXXXKMLRDQGIKKETGLS 467
++++D + K G+S
Sbjct: 428 IYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 243/481 (50%), Gaps = 13/481 (2%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPL-LSHHLINFYSKTQLPNSSLQVFNS 82
T+ + L A T + G +H I+ G + + + + LI+ YSK +S+ +VF+
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDE 287
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
+ R+ +W+S+++ F N AL+ F M++ + D+ + + + C
Sbjct: 288 TTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC 347
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
S+H + ++ Y + SSL+D Y C + A V D M +++VVS S MI G
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD-SSCF 261
G +EA+ +F + D N T+ S+L C S L K HG + S +
Sbjct: 408 GRSDEAISIFCHM---RDTP-NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDIS 463
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
V +S++ Y+KCGA+E A + F+++ +N+ W ++ A A + ++ LF++MK
Sbjct: 464 VGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQ-K 522
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELM-KKDYGIEPGSQHYATMVDLLGRAGKLQ 380
G PN +T+L L AC+H GLV+KG F+ M ++D+ +P QHY+ +VD+L RAG++
Sbjct: 523 GYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH--KPSLQHYSCIVDMLSRAGEID 580
Query: 381 DAVQVIEEMP--MEPTESVWGALLTGCRIH-GDTELASYVADRVFEQGHVSSGLNVLLSN 437
AV++I+ +P ++ S WGA+L+GCR + S V V E + S +L S+
Sbjct: 581 TAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASS 640
Query: 438 XXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEE 497
++++++ ++ G S V EGN F AGD+ E+ + ++
Sbjct: 641 TFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQS 700
Query: 498 L 498
L
Sbjct: 701 L 701
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 173/387 (44%), Gaps = 35/387 (9%)
Query: 61 HHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL 120
+ + +FY K S L+ F+ R + +W+ ++ L +F ++ G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 121 PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNV 180
P+ L +C +L G +H +++ + V +S++ MYA + AR +
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKL 181
Query: 181 FDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTL 240
FDEM R+V+SWS +I YVQ E L+LFK+++ E + T++SVL+ C
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 241 LELGKQIHGWCFKTSFD-SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLI 299
+++G+ +HG+ + FD + FV +SLI +YSK V+ A++ F+E RN+ WN++L
Sbjct: 242 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILA 301
Query: 300 ACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS-----------HAGLVEKGQH 348
+ + E+F M V+ + +T + +L C H ++ +G
Sbjct: 302 GFVHNQRYDEALEMFHLMVQ-EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 349 YFEL-------------MKKDYGIEPGSQHY------ATMVDLLGRAGKLQDAVQVIEEM 389
E+ + D G S Y +TM+ L AG+ +A+ + M
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM 420
Query: 390 PMEPTESVWGALLTGCRIHGDTELASY 416
P +LL C + D + +
Sbjct: 421 RDTPNAITVISLLNACSVSADLRTSKW 447
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 151/336 (44%), Gaps = 46/336 (13%)
Query: 75 SSLQVFNSSPHRSATT--WSSLISSFAQNDLPHLALDFFRQMLRIGL-LPDDHILPTAAK 131
S LQ +S +++ + W ++S +++ + R G+ D + P K
Sbjct: 7 SKLQALSSKIKQASVSGKWREVVSGYSE-------------IQRAGVQFNDPFVFPIVFK 53
Query: 132 SCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVS 191
+CA LS + F +S+ D Y KCG++ FD M R+ VS
Sbjct: 54 ACAKLSWL-------------------FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVS 94
Query: 192 WSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWC 251
W+ +++G + G +EE L F ++ V G T + VL + +L G++IHG+
Sbjct: 95 WNVIVFGLLDYGFEEEGLWWFSKLRVW---GFEPNTSTLVLVIHACRSLWFDGEKIHGYV 151
Query: 252 FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTF 311
++ F V +S++ +Y+ ++ A + F+E+ R++ W+ ++ + Q
Sbjct: 152 IRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGL 210
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYA-T 368
+LF++M +P+ +T VL AC+ ++ G+ H F + + G + +
Sbjct: 211 KLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRR---GFDLADVFVCNS 267
Query: 369 MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
++D+ + + A +V +E S W ++L G
Sbjct: 268 LIDMYSKGFDVDSAFRVFDETTCRNIVS-WNSILAG 302
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 189/378 (50%), Gaps = 23/378 (6%)
Query: 228 LSSVLR---VCGASTLLELGKQIHGWCFKTSFDSSCFVASS---LISLYSKCGAVEGAYQ 281
LS +LR +CG + L+ K +HG K S S SS L+ +YS CG A
Sbjct: 254 LSRLLRLAKICGEAEGLQEAKTVHG---KISASVSHLDLSSNHVLLEMYSNCGLANEAAS 310
Query: 282 AFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
FE++ +NL W ++ A++ ++F + K G + P+ F + YAC G
Sbjct: 311 VFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGMLG 369
Query: 342 LVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGAL 401
V++G +FE M +DYGI P + Y ++V++ G L +A++ +E MPMEP VW L
Sbjct: 370 DVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETL 429
Query: 402 LTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIK 461
+ R+HG+ EL Y A+ V L + + +K
Sbjct: 430 MNLSRVHGNLELGDYCAEVV----------EFLDPTRLNKQSREGFIPVKASDVEKESLK 479
Query: 462 KETG-LSWVEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGG 520
K +G L V+ + F AGD + + E++ L L M + GYVA+T L ++
Sbjct: 480 KRSGILHGVKSS--MQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQ 537
Query: 521 EEKNQTIRYHSERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRD 580
E K + HSER+A A ++ +P V+KNLRVC DCH A+K +S I GR +I RD
Sbjct: 538 ESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRD 597
Query: 581 NNRFHRFEDGKCTCGDYW 598
RFH+ ++G CTC DYW
Sbjct: 598 IKRFHQMKNGACTCKDYW 615
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 13/196 (6%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHI---IKTGLETIPLLSHH-LINFYSKTQLPNSS 76
NY + LL L GLQ + I + + L S+H L+ YS L N +
Sbjct: 249 NYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEA 308
Query: 77 LQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAAL 136
VF ++ TW +I FA+N A+D F + G +PD + +C L
Sbjct: 309 ASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGML 368
Query: 137 SSIHVGLSLHALALKTAYHLDVFVAS--SLVDMYAKCGEIGYARNVFDEMPHR-NVVSWS 193
+ GL LH ++ Y + + SLV+MYA G + A + MP NV W
Sbjct: 369 GDVDEGL-LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWE 427
Query: 194 GM-----IYGYVQLGE 204
+ ++G ++LG+
Sbjct: 428 TLMNLSRVHGNLELGD 443
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 130 AKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNV 189
AK C + ++H + HLD+ L++MY+ CG A +VF++M +N+
Sbjct: 261 AKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNL 320
Query: 190 VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTL-SSVLRVCGASTLLELGKQIH 248
+W +I + + G E+A+ +F + +E+ + D L + CG LG
Sbjct: 321 ETWCIIIRCFAKNGFGEDAIDMFSR--FKEEGNIPDGQLFRGIFYACGM-----LGDVDE 373
Query: 249 GWCFKTSFDSSCFVAS------SLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAML 298
G S +A SL+ +Y+ G ++ A + E + + N+ +W ++
Sbjct: 374 GLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 223/433 (51%), Gaps = 8/433 (1%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G Q+H IKTG E L+S+ + YS + ++ +VF S + TW+++ISS+ Q
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
L A+ +++M IG+ PD+ + + L + + + A +K + +
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEI 423
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
+++L+ Y+K G+I A +F+ +N++SW+ +I G+ G E L F L+E +
Sbjct: 424 SNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF-SCLLESE 482
Query: 221 VGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
V + + +TLS++L +C +++ L LG Q H + + + ++LI++YS+CG ++
Sbjct: 483 VRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQN 542
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
+ + F ++ +++ WN+++ A ++H ++ M+ G V P+ TF VL ACS
Sbjct: 543 SLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACS 602
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQV--IEEMPMEPTES 396
HAGLVE+G F M + +G+ H++ +VDLLGRAG L +A + I E +
Sbjct: 603 HAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD 662
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLR 456
VW AL + C HGD +L VA + E+ + V LSN + +
Sbjct: 663 VWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAIN 722
Query: 457 DQGIKKETGLSWV 469
G K+ G SW+
Sbjct: 723 MIGAMKQRGCSWM 735
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 195/408 (47%), Gaps = 25/408 (6%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS--PHR 86
+L++ SL G Q+H+ +IK G + + LI Y Q+ + VF + R
Sbjct: 196 ILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
T++ +I A +L FR+ML L P D + SC+ + +G +H
Sbjct: 256 DQVTFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVH 311
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
LA+KT Y V+++ + MY+ + G A VF+ + +++V+W+ MI Y Q +
Sbjct: 312 GLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGK 371
Query: 207 EALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
A+ ++K++ + +GV ++FT S+L S L++ + + K S +++
Sbjct: 372 SAMSVYKRMHI---IGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISN 425
Query: 265 SLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQ----MKSV 320
+LIS YSK G +E A FE +NL WNA++ + H FE E+ ++S
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAII---SGFYHNGFPFEGLERFSCLLESE 482
Query: 321 GGVKPNFITFLCVLYAC-SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
+ P+ T +L C S + L+ Q + +++ +G + ++++ + G +
Sbjct: 483 VRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR--HGQFKETLIGNALINMYSQCGTI 540
Query: 380 QDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
Q++++V +M + S W +L++ HG+ E A + ++G V
Sbjct: 541 QNSLEVFNQMSEKDVVS-WNSLISAYSRHGEGENAVNTYKTMQDEGKV 587
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 192/412 (46%), Gaps = 49/412 (11%)
Query: 30 LALTHSRSLRR---GLQLHAHIIKTGLETIPLLSHHLINFYSK----------------- 69
LA+T +R LR G Q+H + I++GL +S+ L++ Y +
Sbjct: 62 LAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEP 121
Query: 70 -----TQLPNSSL---------QVFNSSPHRS-ATTWSSLISSFAQNDLPHLALDFFRQM 114
T L ++S +VF+ P R W+++I+ ++ +++ FR+M
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
Query: 115 LRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEI 174
++G+ D T C S+ G +H+L +K + + V ++L+ MY C +
Sbjct: 182 HKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 175 GYARNVFDE--MPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVL 232
A VF+E + R+ V+++ +I G D E+L +F+++L E + D T SV+
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKML-EASLRPTDLTFVSVM 298
Query: 233 RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG 292
C + +G Q+HG KT ++ V+++ +++YS A++ FE L+ ++L
Sbjct: 299 GSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLV 355
Query: 293 MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL 352
WN M+ + Q ++++M + GVKP+ TF +L ++E Q +
Sbjct: 356 TWNTMISSYNQAKLGKSAMSVYKRMHII-GVKPDEFTFGSLLATSLDLDVLEMVQAC--I 412
Query: 353 MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+K +G+ + ++ + G+++ A ++ E + W A+++G
Sbjct: 413 IK--FGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISG 461
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 37/270 (13%)
Query: 107 ALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLV 165
AL F + R L PD + + A + L G +H A+++ V+++L+
Sbjct: 40 ALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLL 99
Query: 166 DMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV-- 223
+Y + G + + FDE+ +V SW+ ++ +LG+ E A +F ++ +DV +
Sbjct: 100 SLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWN 159
Query: 224 -----------------------------NDFTLSSVLRVCGASTLLELGKQIHGWCFKT 254
+ F +++L +C + L+ GKQ+H K
Sbjct: 160 AMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS-LDFGKQVHSLVIKA 218
Query: 255 SFDSSCFVASSLISLYSKCGAVEGAYQAFEE--LQVRNLGMWNAMLIACAQHAHTNRTFE 312
F + V ++LI++Y C V A FEE + VR+ +N ++ A + +
Sbjct: 219 GFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLL 277
Query: 313 LFEQMKSVGGVKPNFITFLCVLYACSHAGL 342
+F +M ++P +TF+ V+ +CS A +
Sbjct: 278 VFRKMLE-ASLRPTDLTFVSVMGSCSCAAM 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL 94
+ SL G Q HA++++ G L+ + LIN YS+ +SL+VFN + +W+SL
Sbjct: 502 TSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSL 561
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI-HVGLSLHALALKTA 153
IS+++++ A++ ++ M G ++P AA A LS+ H GL L + +
Sbjct: 562 ISAYSRHGEGENAVNTYKTMQDEG-----KVIPDAATFSAVLSACSHAGLVEEGLEIFNS 616
Query: 154 Y--------HLDVFVASSLVDMYAKCGEIGYARNV 180
++D F S LVD+ + G + A ++
Sbjct: 617 MVEFHGVIRNVDHF--SCLVDLLGRAGHLDEAESL 649
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 243/508 (47%), Gaps = 72/508 (14%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
NY + C++LL L R+L+ Q HA I +G +S+ +F + N +
Sbjct: 3 NYSS-CSYLLKLC--RTLKHLHQFHAQFITSGR-----ISN---DFKQNSVFANVLFAIT 51
Query: 81 NSSPHRSAT----TWSSLI-------SSFAQNDLPHL----------ALDFFRQMLRIGL 119
+ SP SA+ ++++ + S+F N + + + FF +M R +
Sbjct: 52 SISPSASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSV 111
Query: 120 LPDDHILPTAAKSCAALSSIHVGL--SLHALALKTAYHLDVFVASSLVDMYA-------- 169
PD H P K+CAA + + L +LH AL+ D+F ++L+ +Y+
Sbjct: 112 PPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSA 171
Query: 170 -----------------------KCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
K EI AR +FD MP R++VSW+ +I GY Q+
Sbjct: 172 LQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCR 231
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
EA++LF + +V + ++ + S L C S + GK IH + + F+A+ L
Sbjct: 232 EAIKLFDE-MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGL 290
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
+ Y+KCG ++ A + FE + L WNAM+ A H + T + F +M S G+KP+
Sbjct: 291 VDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVS-SGIKPD 349
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
+TF+ VL CSH+GLV++ ++ F+ M+ Y + +HY M DLLGRAG +++A ++I
Sbjct: 350 GVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMI 409
Query: 387 EEMPMEPTES----VWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXX 442
E+MP + W LL GCRIHG+ E+A A+RV G+ ++
Sbjct: 410 EQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANA 469
Query: 443 XXXXXXXXXXKML-RDQGIKKETGLSWV 469
+++ RD+ +KK G S V
Sbjct: 470 ERWEEVVKVREIIDRDKKVKKNVGFSKV 497
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 204/398 (51%), Gaps = 3/398 (0%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR-SATTWSSLISSFA 99
G LH +++G L + LI+FY + + +VF+ P A T+S+L++ +
Sbjct: 144 GEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
Q LALD FR M + ++ + L + + + L + S H L +K LD+
Sbjct: 204 QVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLH 263
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
+ ++L+ MY K G I AR +FD ++VV+W+ MI Y + G EE + L +Q+ E+
Sbjct: 264 LITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK 323
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
+ N T +L C S +G+ + + + ++L+ +Y+K G +E A
Sbjct: 324 -MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG-GVKPNFITFLCVLYACS 338
+ F ++ +++ W AM+ H LF +M+ V+PN ITFL VL ACS
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
H GLV +G F+ M + Y P +HY +VDLLGRAG+L++A ++I +P+ + W
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
ALL CR++G+ +L V R+ E G +LL+
Sbjct: 503 RALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 184/368 (50%), Gaps = 6/368 (1%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
++H +++KTGL+ L+ F S + +S +F + + ++++I ++ +D
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYAS-SIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
P A F Q+ GL D T KSC+ + +G LH +AL++ + + + +
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
+L+ Y CG+I AR VFDEMP + V++S ++ GY+Q+ + AL LF+ ++ + +V
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFR-IMRKSEV 223
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
VN TL S L L + H C K D + ++LI +Y K G + A +
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 282 AFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
F+ +++ WN M+ A+ L QMK +KPN TF+ +L +C+++
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK-YEKMKPNSSTFVGLLSSCAYSE 342
Query: 342 LVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGAL 401
G+ +L++++ I + +VD+ + G L+ AV++ M + +S W A+
Sbjct: 343 AAFVGRTVADLLEEER-IALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS-WTAM 400
Query: 402 LTGCRIHG 409
++G HG
Sbjct: 401 ISGYGAHG 408
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 13/313 (4%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+ + L A++ L H IK GL+ L LI Y KT +S+ ++F
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ + + TW+ +I +A+ L + RQM + P+ SCA +
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF 345
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
VG ++ L + LD + ++LVDMYAK G + A +F+ M ++V SW+ MI GY
Sbjct: 346 VGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYG 405
Query: 201 QLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
G EA+ LF + + EE+ V N+ T VL C L+ G + CFK ++
Sbjct: 406 AHGLAREAVTLFNK-MEEENCKVRPNEITFLVVLNACSHGGLVMEGIR----CFKRMVEA 460
Query: 259 SCFVAS-----SLISLYSKCGAVEGAYQAFEELQV-RNLGMWNAMLIACAQHAHTNRTFE 312
F ++ L + G +E AY+ L + + W A+L AC + + +
Sbjct: 461 YSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGES 520
Query: 313 LFEQMKSVGGVKP 325
+ ++ +G P
Sbjct: 521 VMMRLAEMGETHP 533
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 205/378 (54%), Gaps = 3/378 (0%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
R G +H + IK +E+ + +I+ Y+K + +L+ F P + A +++L +
Sbjct: 418 RLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGY 477
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
Q + A D ++ M G+ PD + ++CA S G ++ +K + +
Sbjct: 478 TQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSEC 537
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
VA +L++M+ KC + A +FD+ ++ VSW+ M+ GY+ G+ EEA+ F+Q+ V
Sbjct: 538 HVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKV 597
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
E+ N T +++R + L +G +H + F S V +SL+ +Y+KCG +E
Sbjct: 598 EK-FQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIE 656
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
+ + F E+ + + WN ML A A H + LF M+ +KP+ ++FL VL AC
Sbjct: 657 SSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQE-NELKPDSVSFLSVLSAC 715
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
HAGLVE+G+ FE M + + IE +HYA MVDLLG+AG +AV+++ M ++ + V
Sbjct: 716 RHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGV 775
Query: 398 WGALLTGCRIHGDTELAS 415
WGALL R+H + L++
Sbjct: 776 WGALLNSSRMHCNLWLSN 793
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 188/372 (50%), Gaps = 7/372 (1%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
LH +IK G I S LI+ Y ++ VF + ++W ++++++A N
Sbjct: 223 LHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGF 280
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
L+ F M + + +A ++ A + + G+++H A++ DV VA+S
Sbjct: 281 FEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATS 340
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+ MY+KCGE+ A +F + R+VVSWS MI Y Q G+ +EA+ LF+ ++ +
Sbjct: 341 LMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRD-MMRIHIKP 399
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAF 283
N TL+SVL+ C LGK IH + K +S A+++IS+Y+KCG A +AF
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
E L +++ +NA+ Q N+ F++++ MK + GV P+ T + +L C+
Sbjct: 460 ERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK-LHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 344 EKGQH-YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
+G Y +++K + E H ++++ + L A+ + ++ E + W ++
Sbjct: 519 ARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 403 TGCRIHGDTELA 414
G +HG E A
Sbjct: 577 NGYLLHGQAEEA 588
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 185/373 (49%), Gaps = 5/373 (1%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L +G+ +H + ++ GL ++ L++ YSK + Q+F + R +WS++I+S
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ Q A+ FR M+RI + P+ L + + CA +++ +G S+H A+K +
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ A++++ MYAKCG A F+ +P ++ V+++ + GY Q+G+ +A ++K + +
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
V + T+ +L+ C + G ++G K FDS C VA +LI++++KC A+
Sbjct: 496 -HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 278 GAYQAFEELQV-RNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
A F++ ++ WN M+ H F QMK V +PN +TF+ ++ A
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMK-VEKFQPNAVTFVNIVRA 613
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
+ + G + + G + ++VD+ + G ++ + + E+ + S
Sbjct: 614 AAELSALRVGMSVHSSLIQ-CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS 672
Query: 397 VWGALLTGCRIHG 409
W +L+ HG
Sbjct: 673 -WNTMLSAYAAHG 684
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 21/383 (5%)
Query: 27 NHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR 86
N LL L ++ R LQ+H +I +GL+ + LIN YS Q + S +F+S
Sbjct: 7 NLLLMLRECKNFRCLLQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDP 62
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLR-IGLLPDDHILPTAAKSCAALSSIHVGLSL 145
W+S+I + + L AL FF M G+ PD + A K+CA GL +
Sbjct: 63 GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRI 122
Query: 146 HALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGED 205
H L + DV++ ++LV+MY K ++ AR VFD+M ++VV+W+ M+ G Q G
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCS 182
Query: 206 EEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASS 265
AL LF + V ++ +L +++ ++ + +HG K F + +S
Sbjct: 183 SAALLLFHD-MRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSG 239
Query: 266 LISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP 325
LI +Y C + A FEE+ ++ W M+ A A + ELF+ M++ V+
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNY-DVRM 298
Query: 326 NFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPG----SQHYATMVDLLGRAGKLQD 381
N + L A ++ G + KG + DY ++ G +++ + + G+L+
Sbjct: 299 NKVAAASALQAAAYVGDLVKG-----IAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI 353
Query: 382 AVQVIEEMPMEPTESV-WGALLT 403
A Q+ + +E + V W A++
Sbjct: 354 AEQLF--INIEDRDVVSWSAMIA 374
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 141/289 (48%), Gaps = 8/289 (2%)
Query: 23 RTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
RT+ L RG ++ IIK G ++ ++H LIN ++K +++ +F+
Sbjct: 503 RTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK 562
Query: 83 SP-HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHV 141
+S +W+ +++ + + A+ FRQM P+ ++ A LS++ V
Sbjct: 563 CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV 622
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
G+S+H+ ++ + V +SLVDMYAKCG I + F E+ ++ +VSW+ M+ Y
Sbjct: 623 GMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAA 682
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIH---GWCFKTSFDS 258
G A+ LF + E ++ + + SVL C + L+E GK+I G K +
Sbjct: 683 HGLASCAVSLFLS-MQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEV 741
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAH 306
+ + ++ L K G A + ++V+ ++G+W A+L + H +
Sbjct: 742 EHY--ACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCN 788
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 2/178 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T N + A +LR G+ +H+ +I+ G + + + L++ Y+K + SS + F
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCF 662
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
++ +W++++S++A + L A+ F M L PD + +C +
Sbjct: 663 IEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVE 722
Query: 141 VGLSL-HALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVS-WSGMI 196
G + + + +V + +VD+ K G G A + M + V W ++
Sbjct: 723 EGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 192/386 (49%), Gaps = 40/386 (10%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
G Q+H IK+GL T + + L+N Y ++ + +V + P R A +W+SL+S+
Sbjct: 156 FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSA 215
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ + L A F +M +
Sbjct: 216 YLEKGLVDEARALFDEM---------------------------------------EERN 236
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
V + ++ YA G + A+ VFD MP R+VVSW+ M+ Y +G E L +F ++L
Sbjct: 237 VESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD 296
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+ + FTL SVL C + L G+ +H + K + F+A++L+ +YSKCG ++
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + F R++ WN+++ + H E+F +M G KPN ITF+ VL AC
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM-VYEGFKPNGITFIGVLSAC 415
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
+H G++++ + FE+M Y +EP +HY MVDLLGR GK+++A +++ E+P + +
Sbjct: 416 NHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASIL 475
Query: 398 WGALLTGCRIHGDTELASYVADRVFE 423
+LL C+ G E A +A+R+ E
Sbjct: 476 LESLLGACKRFGQLEQAERIANRLLE 501
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 188/410 (45%), Gaps = 46/410 (11%)
Query: 29 LLALTH-SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNS---SLQVFNSSP 84
+L+ T ++SL Q HA ++KTGL + L+ F + P + + + N
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 85 HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLS 144
+ T +S+I ++A + P +AL FR+ML + PD + K+CAA G
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE 204
+H L +K+ DVFV ++LV++Y + G AR V D MP R+ VSW+ ++ Y++ G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
+EA LF + +EE + + W F
Sbjct: 222 VDEARALFDE--MEE-------------------------RNVESWNF------------ 242
Query: 265 SLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
+IS Y+ G V+ A + F+ + VR++ WNAM+ A A N E+F +M K
Sbjct: 243 -MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEK 301
Query: 325 PNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQ 384
P+ T + VL AC+ G + +G+ + K +GIE +VD+ + GK+ A++
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDK-HGIEIEGFLATALVDMYSKCGKIDKALE 360
Query: 385 VIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVL 434
V S W ++++ +HG + A + + +G +G+ +
Sbjct: 361 VFRATSKRDV-STWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFI 409
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLS-HHLINFYSKTQLPNSSLQVFNSSPHRSATTWSS 93
S L +GL A + +E + S + +I+ Y+ L + +VF+S P R +W++
Sbjct: 214 SAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 273
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGL-LPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
+++++A + L+ F +ML PD L + +CA+L S+ G +H K
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF 212
++ F+A++LVDMY+KCG+I A VF R+V +W+ +I G ++AL +F
Sbjct: 334 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 393
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQI 247
+ +V E N T VL C +L+ +++
Sbjct: 394 SE-MVYEGFKPNGITFIGVLSACNHVGMLDQARKL 427
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A SL +G +H +I K G+E L+ L++ YSK + +L+VF ++
Sbjct: 306 TLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRAT 365
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
R +TW+S+IS + + L AL+ F +M+ G P+ +C HVG+
Sbjct: 366 SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACN-----HVGM 420
Query: 144 SLHALAL----KTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHRNV-VSWSGMI 196
A L + Y ++ + +VD+ + G+I A + +E+P + ++
Sbjct: 421 LDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLL 480
Query: 197 YGYVQLGEDEEALRLFKQVL 216
+ G+ E+A R+ ++L
Sbjct: 481 GACKRFGQLEQAERIANRLL 500
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 190/358 (53%), Gaps = 12/358 (3%)
Query: 132 SCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR-NVV 190
S A +S G +HAL K ++ + + +SLV Y+ G++ YAR VFDE P + N+V
Sbjct: 74 SSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIV 133
Query: 191 SWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGW 250
W+ MI Y + EA+ LFK++ E+ + ++ ++ L C +++G++I+
Sbjct: 134 LWTAMISAYTENENSVEAIELFKRMEAEK-IELDGVIVTVALSACADLGAVQMGEEIYSR 192
Query: 251 CFKTS--FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTN 308
K + +SL+++Y K G E A + F+E +++ + +M+ A +
Sbjct: 193 SIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQ 252
Query: 309 RTFELFEQMKSVGG-----VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGS 363
+ ELF++MK++ + PN +TF+ VL ACSH+GLVE+G+ +F+ M DY ++P
Sbjct: 253 ESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPRE 312
Query: 364 QHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFE 423
H+ MVDL R+G L+DA + I +MP++P +W LL C +HG+ EL V R+FE
Sbjct: 313 AHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE 372
Query: 424 QGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAG 481
G V LSN +R ++ G SW+E G+ ++ F +G
Sbjct: 373 LDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFVSG 427
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 152/291 (52%), Gaps = 19/291 (6%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR-SATTWSSLISSFA 99
G Q+HA + K G + + L+ FYS + + QVF+ +P + + W+++IS++
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL--D 157
+N+ A++ F++M + D I+ A +CA L ++ +G +++ ++K L D
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+ + +SL++MY K GE AR +FDE ++V +++ MI+GY G+ +E+L LFK++
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 218 EED-----VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA--SSLISLY 270
+ + ND T VL C S L+E GK+ H ++ A ++ L+
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 271 SKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHT-------NRTFEL 313
+ G ++ A++ ++ ++ N +W +L AC+ H + R FEL
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 34 HSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSS 93
+SRS++R +L + L + L+N Y K+ + ++F+ S + TT++S
Sbjct: 190 YSRSIKRKRRLAMDLT---------LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI-HVGL----SLHAL 148
+I +A N +L+ F++M I D I P L + H GL H
Sbjct: 241 MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFK 300
Query: 149 ALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMPHR-NVVSWSGM-----IYGYV 200
++ Y+L A +VD++ + G + A ++MP + N V W + ++G V
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNV 360
Query: 201 QLGEDEEALRLFK 213
+LGE E R+F+
Sbjct: 361 ELGE-EVQRRIFE 372
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 226/467 (48%), Gaps = 44/467 (9%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G+QLH +K+G E + L++ YS+ + ++F PH+S T+++ IS +
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 101 NDLPHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
N + +L F M + P+D A +CA+L ++ G LH L +K + +
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPH-RNVVSW----SGM------------------- 195
V ++L+DMY+KC A VF E+ RN++SW SGM
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE 327
Query: 196 ------------IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFT-LSSVLRVCGASTLLE 242
I G+ QLG+ EA + F+++L V V L+S+L C L+
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERML--SVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 243 LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFE--ELQVRNLGMWNAMLIA 300
GK+IHG K + + FV +SLI +Y KCG A + F+ E + ++ WN M+
Sbjct: 386 NGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 301 CAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIE 360
+H E+FE ++ V+P+ TF VL ACSH G VEKG F LM+++YG +
Sbjct: 446 YGKHGECESAIEIFELLRE-EKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 361 PGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADR 420
P ++H M+DLLGR+G+L++A +VI++M + +LL CR H D L A +
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMK 563
Query: 421 VFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLS 467
+ E + V+LS+ +++ + + K GLS
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 155/315 (49%), Gaps = 5/315 (1%)
Query: 40 RGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
+G LHA ++KTG + L++ Y K + +L+V + P R + ++ +S
Sbjct: 49 QGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLL 108
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
+N A F G + + + C I G+ LH LA+K+ + ++V+
Sbjct: 109 ENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVY 165
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
V +SLV MY++CGE A +F+++PH++VV+++ I G ++ G +F +
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFS 225
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
ND T + + C + L+ G+Q+HG K F V ++LI +YSKC + A
Sbjct: 226 SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSA 285
Query: 280 YQAFEELQ-VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
Y F EL+ RNL WN+++ + ELFE++ S G+KP+ T+ ++ S
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS-EGLKPDSATWNSLISGFS 344
Query: 339 HAGLVEKGQHYFELM 353
G V + +FE M
Sbjct: 345 QLGKVIEAFKFFERM 359
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 156/306 (50%), Gaps = 7/306 (2%)
Query: 121 PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNV 180
P+ P KSCA L + G LHA +KT + +DVF A++LV MY K ++ A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 181 FDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTL 240
DEMP R + S + + G ++ G +A R+F V G+N T++SVL CG
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGS-GMNSVTVASVLGGCGD--- 144
Query: 241 LELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIA 300
+E G Q+H K+ F+ +V +SL+S+YS+CG A + FE++ +++ +NA +
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 301 CAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL-MKKDYGI 359
++ N +F M+ +PN +TF+ + AC+ ++ G+ L MKK++
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 360 EPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVAD 419
E + ++D+ + + A V E+ W ++++G I+G E A + +
Sbjct: 265 E--TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 420 RVFEQG 425
++ +G
Sbjct: 323 KLDSEG 328
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 189/355 (53%), Gaps = 3/355 (0%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKT-GLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS 87
L L ++L+ G ++HAH++K+ P + LI+ Y K S +VF S R+
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
A +W++L+S +A N AL M + G PD + T CA L +I G +H
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHC 442
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
ALK + +V + +SL+ MY+KCG Y +FD + RNV +W+ MI YV+ +
Sbjct: 443 YALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLI 267
+ +F+ +L+ + + T+ VL VC L+LGK++HG K F+S FV++ +I
Sbjct: 503 GIEVFRLMLLSKHRP-DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARII 561
Query: 268 SLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF 327
+Y KCG + A +F+ + V+ W A++ A + FEQM S G PN
Sbjct: 562 KMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVS-RGFTPNT 620
Query: 328 ITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
TF VL CS AG V++ +F LM + Y ++P +HY+ +++LL R G++++A
Sbjct: 621 FTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 165/330 (50%), Gaps = 4/330 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T L A +SL G Q+H HI GLE+ L L++ Y+ + +VF
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 81 NSSPHRSATTWSSLI--SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS 138
+ S + +W++L+ + + L F +M +G+ + + L KS A S+
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+ GL HALA+K VF+ +SLVDMY KCG++G AR VFDE+ R++V W MI G
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT-SFD 257
EAL LF+ ++ EE + N L+++L V G L+LGK++H K+ ++
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQM 317
FV S LI LY KCG + + F + RN W A++ A + ++ M
Sbjct: 350 EQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWM 409
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQ 347
+ G +P+ +T VL C+ +++G+
Sbjct: 410 QQ-EGFRPDVVTIATVLPVCAELRAIKQGK 438
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 160/361 (44%), Gaps = 21/361 (5%)
Query: 66 FYSKTQLPNSSLQVFNSSP---HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
F + P SSL + + +P HR I FA+ + +AL + + G+ +
Sbjct: 59 FRERDAFP-SSLPLHSKNPYIIHRD-------IQIFARQNNLEVALTILDYLEQRGIPVN 110
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFD 182
++C S+ G +H + F+ + LV MY CG + A+ VFD
Sbjct: 111 ATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFD 170
Query: 183 EMPHRNVVSWSGMIYGYVQLGED--EEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTL 240
E NV SW+ ++ G V G+ ++ L F + + E V +N ++LS+V + ++
Sbjct: 171 ESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE-MRELGVDLNVYSLSNVFKSFAGASA 229
Query: 241 LELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIA 300
L G + H K +S F+ +SL+ +Y KCG V A + F+E+ R++ +W AM+
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 301 CAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HYFELMKKDYG 358
A + LF M S + PN + +L ++ G+ H L K+Y
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 359 IEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG--DTELASY 416
+P ++ ++DL + G + +V S W AL++G +G D L S
Sbjct: 350 EQPFV--HSGLIDLYCKCGDMASGRRVFYGSKQRNAIS-WTALMSGYAANGRFDQALRSI 406
Query: 417 V 417
V
Sbjct: 407 V 407
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 222/432 (51%), Gaps = 14/432 (3%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G Q+HA +IK G ET + LI+ YSK S++VF S + +W++L+S F +
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
N AL F M R + + L + K+CA+L + G +HA+ + T L V +
Sbjct: 163 NGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVL 221
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
++++ Y+ G I A V++ + H + V + +I G ++ +EA L +
Sbjct: 222 GTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ---- 277
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
N LSS L C ++ L +GKQIH + F S + + L+ +Y KCG + A
Sbjct: 278 --RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQA 335
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG-GVKPNFITFLCVLYACS 338
F + +++ W +M+ A A + + E+F +M G GV PN +TFL V+ AC+
Sbjct: 336 RTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACA 395
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES-- 396
HAGLV++G+ F +MK+ Y + PG++HY +D+L +AG+ ++ +++E M +S
Sbjct: 396 HAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIP 455
Query: 397 --VWGALLTGCRIHGDTELASYVADRVFEQ-GHVSSGLNVLLSNXXXXXXXXXXXXXXXK 453
+W A+L+ C ++ D YVA R+ E+ G ++ + VL+SN
Sbjct: 456 CAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRG 515
Query: 454 MLRDQGIKKETG 465
L+++G+ K G
Sbjct: 516 KLKNKGLVKTAG 527
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 169/348 (48%), Gaps = 11/348 (3%)
Query: 79 VFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS 138
+F+ P R ++ +S +SS ++ P+ L F Q+ R H +C+ LS
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
G +HAL +K ++L+DMY+K G + + VF+ + +++VSW+ ++ G
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS 258
+++ G+ +EAL +F + E V +++FTLSSV++ C + +L+ GKQ+H T D
Sbjct: 160 FLRNGKGKEALGVF-AAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD- 217
Query: 259 SCFVASSLISLYSKCGAVEGAYQAFEELQV-RNLGMWNAMLIACAQHAHTNRTFELFEQM 317
+ +++IS YS G + A + + L V + M N+++ C ++ + F L +
Sbjct: 218 LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ 277
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
+PN L CS + G+ + ++ G S+ ++D+ G+ G
Sbjct: 278 ------RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN-GFVSDSKLCNGLMDMYGKCG 330
Query: 378 KLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
++ A + +P + S W +++ ++GD A + + E+G
Sbjct: 331 QIVQARTIFRAIPSKSVVS-WTSMIDAYAVNGDGVKALEIFREMCEEG 377
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 111/233 (47%), Gaps = 10/233 (4%)
Query: 176 YARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV-LVEEDVGVNDFTLSSVLRV 234
+A ++FDE+P R++ S + + +++ G + L LF Q+ D+ + FT VL
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFT--PVLGA 93
Query: 235 CGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMW 294
C + E G+Q+H K ++ ++LI +YSK G + + + FE ++ ++L W
Sbjct: 94 CSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSW 153
Query: 295 NAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HYFEL 352
NA+L ++ +F M V+ + T V+ C+ ++++G+ H +
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYR-ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 353 MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGC 405
+ + G+ M+ G + +A++V + + E + +L++GC
Sbjct: 213 VTGRDLVVLGT----AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N R + + L + + L G Q+H ++ G + L + L++ Y K + +F
Sbjct: 280 NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIF 339
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLR--IGLLPDDHILPTAAKSCAALSS 138
+ P +S +W+S+I ++A N AL+ FR+M G+LP+ +CA
Sbjct: 340 RAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGL 399
Query: 139 IHVGLSLHALALKTAYHL----DVFVASSLVDMYAKCGE 173
+ G + +K Y L + +V +D+ +K GE
Sbjct: 400 VKEGKECFGM-MKEKYRLVPGTEHYVC--FIDILSKAGE 435
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 194/401 (48%), Gaps = 41/401 (10%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
L G Q+H +IK G ET +L + LI+FY+K S F+ ++ W++L+S
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+A D P + L F QML++G P ++ TA KSC LH++ ++ Y +
Sbjct: 392 YANKDGP-ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQ----LHSVIVRMGYEDN 446
Query: 158 VFVASSLVDMYAKC--------------------------------GEIGYARNVFDEMP 185
+V SSL+ YAK G+ + + +
Sbjct: 447 DYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE 506
Query: 186 HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK 245
+ VSW+ I + EE + LFK +L + ++ + +T S+L +C L LG
Sbjct: 507 QPDTVSWNIAIAACSRSDYHEEVIELFKHML-QSNIRPDKYTFVSILSLCSKLCDLTLGS 565
Query: 246 QIHGWCFKTSFD-SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH 304
IHG KT F + FV + LI +Y KCG++ + FEE + +NL W A++ H
Sbjct: 566 SIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 305 AHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQ 364
+ E F++ S+G KP+ ++F+ +L AC H G+V++G F+ MK DYG+EP
Sbjct: 626 GYGQEALEKFKETLSLG-FKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMD 683
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGC 405
HY VDLL R G L++A +I EMP VW L GC
Sbjct: 684 HYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 4/304 (1%)
Query: 35 SRSLRRGLQLHAHIIKTGL-ETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSS 93
S +R G QLH +K GL + L+ Y + L + QVF P +S TW+
Sbjct: 126 SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
++S + FFR+++R+G + K + + + + LH A K
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKG 245
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFK 213
++ V +SL+ Y KCG A +F + ++VSW+ +I + +AL+LF
Sbjct: 246 LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFV 305
Query: 214 QVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
+ E N T SVL V LL G+QIHG K ++ + ++LI Y+KC
Sbjct: 306 S-MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKC 364
Query: 274 GAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
G +E + F+ ++ +N+ WNA+L A + LF QM + G +P TF
Sbjct: 365 GNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQM-GFRPTEYTFSTA 422
Query: 334 LYAC 337
L +C
Sbjct: 423 LKSC 426
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 169/347 (48%), Gaps = 7/347 (2%)
Query: 59 LSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIG 118
+ +++I+ Y K + + +VF+ P R+ +++++I +++ A F +M G
Sbjct: 51 VCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFG 110
Query: 119 LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA-YHLDVFVASSLVDMYAKCGEIGYA 177
LP+ + + SCA+L + G LH L+LK + D FV + L+ +Y + + A
Sbjct: 111 YLPNQSTV-SGLLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 178 RNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA 237
VF++MP +++ +W+ M+ G +E + F++ LV + + + VL+
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRE-LVRMGASLTESSFLGVLKGVSC 227
Query: 238 STLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAM 297
L++ KQ+H K D V +SLIS Y KCG A + F++ ++ WNA+
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY 357
+ A A+ + + +LF M G PN T++ VL S L+ G+ ++ K+
Sbjct: 288 ICATAKSENPLKALKLFVSMPE-HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN- 345
Query: 358 GIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
G E G ++D + G L+D+ ++ + + W ALL+G
Sbjct: 346 GCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 172/399 (43%), Gaps = 40/399 (10%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
QLH K GL+ + + LI+ Y K + + ++F + +W+++I + A+++
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
P AL F M G P+ + + + + G +H + +K + + +
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGN 355
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
+L+D YAKCG + +R FD + +N+V W+ ++ GY + L LF Q+L +
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQML-QMGFR 413
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLI--------------- 267
++T S+ L+ C + L +Q+H + ++ + +V SSL+
Sbjct: 414 PTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLL 469
Query: 268 -----------------SLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRT 310
+YS+ G + + L+ + WN + AC++ +
Sbjct: 470 LDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEV 529
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
ELF+ M ++P+ TF+ +L CS + G L+ K + ++
Sbjct: 530 IELFKHMLQ-SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLI 588
Query: 371 DLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
D+ G+ G ++ ++V EE E W AL++ IHG
Sbjct: 589 DMYGKCGSIRSVMKVFEE-TREKNLITWTALISCLGIHG 626
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 144 SLHALALKTAYHL--DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQ 201
+LHAL++ L V+V ++++ +Y K GE+ A VFD+MP RN VS++ +I GY +
Sbjct: 33 ALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSK 92
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS-FDSSC 260
G+ ++A +F ++ + N T+S +L AS + G Q+HG K F +
Sbjct: 93 YGDVDKAWGVFSEMRYFGYLP-NQSTVSGLLSC--ASLDVRAGTQLHGLSLKYGLFMADA 149
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
FV + L+ LY + +E A Q FE++ ++L WN M+ F ++ +
Sbjct: 150 FVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRM 209
Query: 321 GG 322
G
Sbjct: 210 GA 211
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 205/380 (53%), Gaps = 12/380 (3%)
Query: 29 LLALTHSRS-LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRS 87
LL L R+ G Q+H +++K G+ + ++ L+ FY++ S+L+ F+ +
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGVGNL-IVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
+W+++IS+ ++ A+ F ML LP++ + + K+C+ ++ G +H+
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEE 207
L +K DVFV +SL+DMYAKCGEI R VFD M +RN V+W+ +I + + G EE
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLI 267
A+ LF+ ++ + N+ T+ S+LR CG+ L LGK++H K S + + ++ S+L+
Sbjct: 369 AISLFR-IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLV 427
Query: 268 SLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF 327
LY KCG A+ ++L R++ W AM+ C+ H + + ++M GV+PN
Sbjct: 428 WLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ-EGVEPNP 486
Query: 328 ITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEP---GSQHYATMVDLLGRAGKLQDAVQ 384
T+ L AC+++ + G+ + KK++ + GS ++ + + G + +A +
Sbjct: 487 FTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS----ALIHMYAKCGFVSEAFR 542
Query: 385 VIEEMPMEPTESVWGALLTG 404
V + MP E W A++ G
Sbjct: 543 VFDSMP-EKNLVSWKAMIMG 561
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 182/324 (56%), Gaps = 2/324 (0%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T+C+ L A + ++LR G Q+H+ ++K ++T + L++ Y+K + +VF
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+ +R+ TW+S+I++ A+ A+ FR M R L+ ++ + + ++C ++ ++
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYV 200
+G LHA +K + +V++ S+LV +Y KCGE A NV ++P R+VVSW+ MI G
Sbjct: 403 LGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCS 462
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
LG + EAL K+ +++E V N FT SS L+ C S L +G+ IH K S+
Sbjct: 463 SLGHESEALDFLKE-MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNV 521
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
FV S+LI +Y+KCG V A++ F+ + +NL W AM++ A++ +L +M++
Sbjct: 522 FVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAE 581
Query: 321 GGVKPNFITFLCVLYACSHAGLVE 344
G ++I F +L C L E
Sbjct: 582 GFEVDDYI-FATILSTCGDIELDE 604
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 182/375 (48%), Gaps = 6/375 (1%)
Query: 32 LTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTW 91
L S +R ++HA +K + + ++LI+ + + +VF+S P ++ TW
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTW 151
Query: 92 SSLISSFAQNDLPHLALDFFRQMLRIGL-LPDDHILPTAAKSCAALSSIHVGLSLHALAL 150
+++I + + L A F ++ G+ ++ + C+ + +G +H +
Sbjct: 152 TAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV 211
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
K ++ V SSLV YA+CGE+ A FD M ++V+SW+ +I + G +A+
Sbjct: 212 KVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIG 270
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
+F +L + N+FT+ S+L+ C L G+Q+H K + FV +SL+ +Y
Sbjct: 271 MFIGMLNHWFLP-NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMY 329
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
+KCG + + F+ + RN W +++ A A+ LF MK + N +T
Sbjct: 330 AKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANN-LTV 388
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
+ +L AC G + G+ + K+ IE +T+V L + G+ +DA V++++P
Sbjct: 389 VSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 391 MEPTESVWGALLTGC 405
S W A+++GC
Sbjct: 448 SRDVVS-WTAMISGC 461
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 5/174 (2%)
Query: 237 ASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNA 296
+S + L K+IH K D + ++LIS + G + A + F+ + +N W A
Sbjct: 94 SSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTA 153
Query: 297 MLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKD 356
M+ ++ + F LFE G N F+C+L CS E G+ M K
Sbjct: 154 MIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVK- 212
Query: 357 YGIEPGSQHY-ATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
+ G+ +++V + G+L A++ + M + S W A+++ C G
Sbjct: 213 --VGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVIS-WTAVISACSRKG 263
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 182/368 (49%), Gaps = 17/368 (4%)
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRN 290
+ ++CG + L+ K +H + + S +S+I +YS CG+VE A F + RN
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
L W ++ A++ + F + K G KP+ F + +AC G + +G +F
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN-KPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 351 ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGD 410
E M K+YGI P +HY ++V +L G L +A++ +E M EP +W L+ R+HGD
Sbjct: 306 ESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGD 363
Query: 411 TELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
L D V EQ + S +++++ + G ++
Sbjct: 364 LILGDRCQDMV-EQ--------LDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNY-- 412
Query: 471 EGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYH 530
+ AAGD S + E+Y L+ L + M + GYV + L +V E K++ + H
Sbjct: 413 ---GIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNH 469
Query: 531 SERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDG 590
+ER A + P IRVMKNLRVC DCH A+K +SKI GR LI RD RFH +DG
Sbjct: 470 NERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDG 529
Query: 591 KCTCGDYW 598
C+C +YW
Sbjct: 530 VCSCREYW 537
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 96/222 (43%), Gaps = 16/222 (7%)
Query: 107 ALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVD 166
A++ + G + D L A+ C ++ +H + D+ +S+++
Sbjct: 165 AVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIE 224
Query: 167 MYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF 226
MY+ CG + A VF+ MP RN+ +W G+I + + G+ E+A+ F + +E +
Sbjct: 225 MYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR-FKQEGNKPDGE 283
Query: 227 TLSSVLRVCGASTLLELGKQIHGWC-FKTSFDSSCFVAS-----SLISLYSKCGAVEGAY 280
+ CG LG G F++ + + SL+ + ++ G ++ A
Sbjct: 284 MFKEIFFACGV-----LGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL 338
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAH---TNRTFELFEQMKS 319
+ E ++ N+ +W ++ H +R ++ EQ+ +
Sbjct: 339 RFVESMEP-NVDLWETLMNLSRVHGDLILGDRCQDMVEQLDA 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+I YS +L VFNS P R+ TW +I FA+N A+D F + + G PD
Sbjct: 222 IIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPD 281
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS--SLVDMYAKCGEIGYARNV 180
+ +C L ++ GL LH ++ Y + + SLV M A+ G + A
Sbjct: 282 GEMFKEIFFACGVLGDMNEGL-LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRF 340
Query: 181 FDEMPHRNVVSWSGMI 196
+ M NV W ++
Sbjct: 341 VESM-EPNVDLWETLM 355
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 205/400 (51%), Gaps = 5/400 (1%)
Query: 72 LPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAK 131
L ++ L++ S R T+W+S+IS A + +L F+ M R G + D I
Sbjct: 529 LTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTI 588
Query: 132 SCAA-LSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVV 190
S + L + G H LA+K+ LD + ++L+ MY +C +I A VF + N+
Sbjct: 589 SASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLC 648
Query: 191 SWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGW 250
SW+ +I Q E +LF+ + +E N+ T +L G Q H
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRNLKLEP----NEITFVGLLSASTQLGSTSYGMQAHCH 704
Query: 251 CFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRT 310
+ F ++ FV+++L+ +YS CG +E + F V ++ WN+++ A H +
Sbjct: 705 LIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKA 764
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
ELF+++ S ++PN +F+ +L ACSH+G +++G Y++ M++ +G++P ++H +V
Sbjct: 765 MELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIV 824
Query: 371 DLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSG 430
D+LGRAGKL++A + I + VWGALL+ C HGDT+L VA+ +FE ++
Sbjct: 825 DMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNAS 884
Query: 431 LNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
+ L+N KM+ D +KK G S ++
Sbjct: 885 YYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVID 924
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 178/375 (47%), Gaps = 24/375 (6%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
R+ LH I+TGL L + L+N Y+K + +S+ VF HR +W+++++
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD- 157
N P +L +F+ M G D +C+++ + +G SLH L +K+ Y +
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 158 -VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
V V +S++ MY+KCG+ A VF+E+ R+V+S + ++ G+ G EEA + Q+
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF-VASSLISLYSKCGA 275
+ + + T+ S+ +CG + G+ +HG+ + S V +S+I +Y KCG
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS-VGGVKPNFITFLCVL 334
A F+ R+L WN+M+ A +Q+ T++ LF+++ S K + T L +L
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPT 394
+C + D I S H L + G L A +E M
Sbjct: 505 TSCDSS---------------DSLIFGKSVHC-----WLQKLGDLTSAFLRLETMSETRD 544
Query: 395 ESVWGALLTGCRIHG 409
+ W ++++GC G
Sbjct: 545 LTSWNSVISGCASSG 559
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 3/306 (0%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+H +K GL S L+ FY +T SS +F+ + W+S+I++ QN
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 104 PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASS 163
A+ F +M+ G D L AA + ++L LH LA++T D + ++
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 164 LVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
L+++YAK + A VF M HR++VSW+ ++ + G ++L+ FK +
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKS-MTGSGQEA 287
Query: 224 NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF--DSSCFVASSLISLYSKCGAVEGAYQ 281
+ T S V+ C + L LG+ +HG K+ + ++ V +S+IS+YSKCG E A
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 282 AFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
FEEL R++ NA+L A + F + QM+SV ++P+ T + + C
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 342 LVEKGQ 347
+G+
Sbjct: 408 FSREGR 413
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 13/282 (4%)
Query: 40 RGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
+G H IK+ E L + LI Y + + S+++VF + +W+ +IS+ +
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 658
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
QN FR + L P++ + L S G+ H ++ + + F
Sbjct: 659 QNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPF 715
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
V+++LVDMY+ CG + VF ++ +W+ +I + G E+A+ LFK++
Sbjct: 716 VSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNS 775
Query: 220 DVGVNDFTLSSVLRVCGASTLLELG----KQI-HGWCFKTSFDSSCFVASSLISLYSKCG 274
++ N + S+L C S ++ G KQ+ + K + ++ + + + G
Sbjct: 776 EMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI----VDMLGRAG 831
Query: 275 AVEGAYQAFEEL-QVRNLGMWNAMLIACAQHAHTNRTFELFE 315
+ AY+ + + + G+W A+L AC H T E+ E
Sbjct: 832 KLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAE 873
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
S+H ALK D+ +S L+ Y + GE+ + +FDE+ ++V+ W+ MI Q G
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQ---IHGWCFKTSFDSSC 260
A+ LF +++ + N+F +++L A + L L ++ +H +T
Sbjct: 168 RYIAAVGLFIEMIHKG----NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS 223
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
+ ++L++LY+K + A F ++ R++ WN ++ C + H ++ + F+ M
Sbjct: 224 SLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG- 282
Query: 321 GGVKPNFITFLCVLYACSHAGLVEKGQHYFEL-MKKDYGIEPGSQHYATMVDLLGRAGKL 379
G + + +TF CV+ ACS + G+ L +K Y E +++ + + G
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 380 QDAVQVIEEM 389
+ A V EE+
Sbjct: 343 EAAETVFEEL 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 48/255 (18%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T L A T S G+Q H H+I+ G + P +S L++ YS + + ++VF
Sbjct: 678 NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVF 737
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIG-LLPDDHILPTAAKSCAALSSI 139
+S S + W+S+IS+ + + A++ F+++ + P+ + +C+ I
Sbjct: 738 RNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFI 797
Query: 140 HVGLSLH-----ALALKTAYHLDVFVASSLVDMYAKCGEIGYA----------------- 177
GLS + +K V++ VDM + G++ A
Sbjct: 798 DEGLSYYKQMEEKFGVKPVTEHRVWI----VDMLGRAGKLREAYEFITGIGEPQKAGVWG 853
Query: 178 ------------------RNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
V EM N + + YV LG EEA+RL K V E
Sbjct: 854 ALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMV---E 910
Query: 220 DVGVNDFTLSSVLRV 234
D + SV+ V
Sbjct: 911 DNALKKLPGYSVIDV 925
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 206/397 (51%), Gaps = 33/397 (8%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +H ++K E+ + LI+ YSK ++ +VF+ + ++++IS +A
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYAN 195
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
N AL+ + M +G+ PD ++ +AL ++ +
Sbjct: 196 NSQADEALNLVKDMKLLGIKPD-------------------VITWNALISGFSHMRNEEK 236
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
S ++++ C + GY +VVSW+ +I G V ++E+A FKQ+L
Sbjct: 237 VSEILELM--CLD-GY---------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTH-G 283
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+ N T+ ++L C ++ GK+IHG+ T + FV S+L+ +Y KCG + A
Sbjct: 284 LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAM 343
Query: 281 QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
F + + +N+M+ A H ++ ELF+QM++ G K + +TF +L ACSHA
Sbjct: 344 ILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE-KLDHLTFTAILTACSHA 402
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
GL + GQ+ F LM+ Y I P +HYA MVDLLGRAGKL +A ++I+ M MEP VWGA
Sbjct: 403 GLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGA 462
Query: 401 LLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSN 437
LL CR HG+ ELA A + E +SG +LL++
Sbjct: 463 LLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTS 499
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 172/365 (47%), Gaps = 46/365 (12%)
Query: 36 RSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLI 95
R RG LHAH++ +G+ + ++ L+ FY + + +VF+ P R + +I
Sbjct: 30 RLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMI 89
Query: 96 SSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYH 155
+ A+N +LDFFR+M + GL D I+P+ K+ L G +H L LK +Y
Sbjct: 90 GACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQV 215
D F+ SSL+DMY+K GE+G AR VF ++ +++V ++ MI GY + +EAL L K +
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
LL + + W ++LIS +S
Sbjct: 210 -----------------------KLLGIKPDVITW-------------NALISGFSHMRN 233
Query: 276 VEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFL 331
E + E + + ++ W +++ + + F+ F+QM + G+ PN T +
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLT-HGLYPNSATII 292
Query: 332 CVLYACSHAGLVEKGQ--HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
+L AC+ ++ G+ H + ++ G+E + ++D+ G+ G + +A+ + +
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVT---GLEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 390 PMEPT 394
P + T
Sbjct: 350 PKKTT 354
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N TI L A T ++ G ++H + + TGLE + L++ Y K + ++ +F
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
+P ++ T++S+I +A + L A++ F QM G D +C+
Sbjct: 347 RKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Query: 141 VGLSLHALALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEM 184
+G +L L ++ Y + + + +VD+ + G++ A + M
Sbjct: 407 LGQNLF-LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 230/458 (50%), Gaps = 35/458 (7%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G LH+ IK G+ + ++ LI+ Y K S+ +VF+ P R+ TW+++I +
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 101 NDLPHLALDFFRQM-----------------LRIGLLPDDHI---LPTAAKSCAALSSIH 140
N LA F ++ RI + + +P K+ A S +
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS-VM 183
Query: 141 VGLSLHALALKTAYHL-------DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWS 193
+G+ ++ ++ A + FV S ++ Y + G++ AR +F + R++V W+
Sbjct: 184 LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWN 243
Query: 194 GMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFK 253
+I GY Q G ++A+ F + E + T+SS+L C S L++G+++H
Sbjct: 244 TLIAGYAQNGYSDDAIDAFFN-MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFEL 313
+ + FV+++LI +Y+KCG +E A FE + VR++ N+M+ A H E+
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 314 FEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLL 373
F M+S+ +KP+ ITF+ VL AC H G + +G F MK ++P +H+ ++ LL
Sbjct: 363 FSTMESLD-LKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLL 420
Query: 374 GRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN- 432
GR+GKL++A ++++EM ++P ++V GALL C++H DTE+A V + G +++ +
Sbjct: 421 GRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSE 480
Query: 433 ---VLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLS 467
+SN + +G++K GLS
Sbjct: 481 NHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 160/348 (45%), Gaps = 38/348 (10%)
Query: 92 SSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCA-ALSSIHVGLSLHALAL 150
S+LI + P AL + + R G+ + P ++CA + + +G LH+ ++
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESI 73
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
K DV V SSL+ MY KCG + AR VFDEMP RNV +W+ MI GY+ G+ A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELG-----------KQIHGWC-------- 251
LF+++ V N T +++ G +E K + W
Sbjct: 134 LFEEI----SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVN 189
Query: 252 ----------FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIAC 301
F+ + + FV S ++S Y + G V A F + R+L +WN ++
Sbjct: 190 NRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGY 249
Query: 302 AQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEP 361
AQ+ +++ + F M+ G +P+ +T +L AC+ +G ++ G+ L+ GIE
Sbjct: 250 AQNGYSDDAIDAFFNMQG-EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR-GIEL 307
Query: 362 GSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
++D+ + G L++A V E + + + ++++ IHG
Sbjct: 308 NQFVSNALIDMYAKCGDLENATSVFESISVRSV-ACCNSMISCLAIHG 354
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 209/392 (53%), Gaps = 12/392 (3%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKT-QLPNSSLQVFNSSPHRSATTWSSLIS 96
L+ G+Q+H + K ++ L++ Y++ ++ + LQ F+S R +W+++I
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ-FDSMKERDLVSWNAMID 187
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
+ N + F+ ML G PD + ++ + + + LH LA+K +
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE-DEEALRLFKQV 215
+ SLV+ Y KCG + A + + R+++S + +I G+ Q +A +FK
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKD- 306
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS---FDSSCFVASSLISLYSK 272
++ +++ +SS+L++C + +G+QIHG+ K+S FD + + +SLI +Y+K
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA--LGNSLIDMYAK 364
Query: 273 CGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLC 332
G +E A AFEE++ +++ W +++ +H + + +L+ +M+ +KPN +TFL
Sbjct: 365 SGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH-ERIKPNDVTFLS 423
Query: 333 VLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI--EEMP 390
+L ACSH G E G ++ M +GIE +H + ++D+L R+G L++A +I +E
Sbjct: 424 LLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGI 483
Query: 391 MEPTESVWGALLTGCRIHGDTELASYVADRVF 422
+ + S WGA L CR HG+ +L+ A ++
Sbjct: 484 VSLSSSTWGAFLDACRRHGNVQLSKVAATQLL 515
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 185/381 (48%), Gaps = 4/381 (1%)
Query: 42 LQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQN 101
L +H + I G + L LI+ Y K + ++F+ R +W+++IS F++
Sbjct: 32 LLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRC 91
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
AL F++M R + + + KSC L + G+ +H K ++ V
Sbjct: 92 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 151
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
S+L+ +YA+CG++ AR FD M R++VSW+ MI GY + + LF Q+++ E
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLF-QLMLTEGK 210
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
+ FT S+LR LE+ ++HG K F S + SL++ Y KCG++ A++
Sbjct: 211 KPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWK 270
Query: 282 AFEELQVRNLGMWNAMLIACAQHAH-TNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
E + R+L A++ +Q + T+ F++F+ M + K + + +L C+
Sbjct: 271 LHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM-KTKMDEVVVSSMLKICTTI 329
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGA 400
V G+ K I +++D+ ++G+++DAV EEM + S W +
Sbjct: 330 ASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS-WTS 388
Query: 401 LLTGCRIHGDTELASYVADRV 421
L+ G HG+ E A + +R+
Sbjct: 389 LIAGYGRHGNFEKAIDLYNRM 409
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 156/305 (51%), Gaps = 9/305 (2%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ-N 101
+LH IK G L L+N Y K ++ ++ + R + ++LI+ F+Q N
Sbjct: 235 ELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQN 294
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA-YHLDVFV 160
+ A D F+ M+R+ D+ ++ + K C ++S+ +G +H ALK++ DV +
Sbjct: 295 NCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVAL 354
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEED 220
+SL+DMYAK GEI A F+EM ++V SW+ +I GY + G E+A+ L+ + + E
Sbjct: 355 GNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNR-MEHER 413
Query: 221 VGVNDFTLSSVLRVCGASTLLELGKQIHGWCF-KTSFDSSCFVASSLISLYSKCGAVEGA 279
+ ND T S+L C + ELG +I+ K ++ S +I + ++ G +E A
Sbjct: 414 IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Query: 280 Y---QAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP-NFITFLCVLY 335
Y ++ E + + W A L AC +H + + Q+ S+ KP N+I L +Y
Sbjct: 474 YALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYIN-LASVY 532
Query: 336 ACSHA 340
A + A
Sbjct: 533 AANGA 537
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 232 LRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNL 291
L++C + + IHG F S+ + LI LY K G V+ A + F+ + R++
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 292 GMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFE 351
W AM+ ++ + LF++M VK N T+ VL +C G +++G
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEG----- 132
Query: 352 LMKKDYGIEPGSQH-----YATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
M+ +E G+ + ++ L R GK+++A + M S W A++ G
Sbjct: 133 -MQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS-WNAMIDG 188
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 223/457 (48%), Gaps = 22/457 (4%)
Query: 34 HSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSS----LQVFNSSPHRSAT 89
+S++L + Q+HA ++ G L + ++ SK +SS L VF H
Sbjct: 17 NSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKF 76
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS-IHVGLSLHAL 148
+++L+ D + ++ + + L + A + +A SS + VG +H +
Sbjct: 77 LFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGM 136
Query: 149 ALKTAYHLDV-FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGED-- 205
K + + + ++L+ YAK G++ YAR VFDEMP R V+W+ MI GY +
Sbjct: 137 VKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGN 196
Query: 206 ---EEALRLFKQV-LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF--DSS 259
+A+ LF++ V D T+ VL + LLE+G +HG+ K F +
Sbjct: 197 HNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVD 256
Query: 260 CFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
F+ ++L+ +YSKCG + A+ FE ++V+N+ W +M A + N T L +M
Sbjct: 257 VFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAE 316
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G+KPN ITF +L A H GLVE+G F+ MK +G+ P +HY +VDLLG+AG++
Sbjct: 317 -SGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRI 375
Query: 380 QDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLN------- 432
Q+A Q I MP++P + +L C I+G+T + + + E L+
Sbjct: 376 QEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDY 435
Query: 433 VLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWV 469
V LSN K ++++ IK G S+V
Sbjct: 436 VALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 204/393 (51%), Gaps = 3/393 (0%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLS-HHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLIS 96
+R G Q+H + I +G+ L+ + +++ Y + + + +L VF + R +W+ LI
Sbjct: 149 VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
S + + +ALD F M + + PD++ + C+ L + G AL +K +
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVL 216
+ V + +DM++KC + + +F E+ + V + MI Y E+ALRLF +
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV 276
+ V + FT SSVL A +L+ G +H K FD VA+SL+ +Y K G+V
Sbjct: 329 TQS-VRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSV 386
Query: 277 EGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
+ A F + ++L WN +++ A+++ + +F Q+ +KP+ +T + +L A
Sbjct: 387 DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVA 446
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTES 396
C +AG V +G F M+K +G+ PG++HYA +++LL R G + +A + +++P EP+
Sbjct: 447 CCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSH 506
Query: 397 VWGALLTGCRIHGDTELASYVADRVFEQGHVSS 429
+W +L GDT LA VA + E SS
Sbjct: 507 IWEPILCASLDLGDTRLAETVAKTMLESEPKSS 539
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 169/371 (45%), Gaps = 33/371 (8%)
Query: 44 LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDL 103
+HA +++ G + + Y K+ ++LQ+F+ P ++ TW+ + +N
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 104 PHLALDFFRQM------------------------LRIGL-LPDDHILPTA---AKSCAA 135
+ ALD F +M +R+ + I PT + +
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 136 LSSIHVGLSLHALALKTAY-HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSG 194
++ + G +H A+ + ++ V +S++DMY + G YA +VF M R+VVSW+
Sbjct: 146 VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNC 205
Query: 195 MIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT 254
+I G E AL F ++ E ++ +++T+S V+ +C L GKQ C K
Sbjct: 206 LILSCSDSGNKEVALDQF-WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKM 264
Query: 255 SFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELF 314
F S+ V + I ++SKC ++ + + F EL+ + + N+M+ + + H LF
Sbjct: 265 GFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF 324
Query: 315 EQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLG 374
+ V+P+ TF VL + +A +++ G L+ K G + + +++++
Sbjct: 325 -ILAMTQSVRPDKFTFSSVL-SSMNAVMLDHGADVHSLVIK-LGFDLDTAVATSLMEMYF 381
Query: 375 RAGKLQDAVQV 385
+ G + A+ V
Sbjct: 382 KTGSVDLAMGV 392
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 7/221 (3%)
Query: 170 KCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLS 229
K G + A ++FDEMP R+VVSW+ MI G V G E +R+F + ++ +FT S
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD-MQRWEIRPTEFTFS 140
Query: 230 SVLRVCGASTLLELGKQIHGWCFKTSFDS-SCFVASSLISLYSKCGAVEGAYQAFEELQV 288
+ + T + G+QIHG + + V +S++ +Y + G + A F ++
Sbjct: 141 ILASLV---TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 289 RNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQH 348
R++ WN ++++C+ + + F M+ + ++P+ T V+ CS + KG+
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREM-EIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 349 YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
L K G S +D+ + +L D+V++ E+
Sbjct: 257 ALALCIK-MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 202/416 (48%), Gaps = 36/416 (8%)
Query: 82 SSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHV 141
+S ++ +++LI S+ +L F ML + P++ P+ K+ + S+
Sbjct: 45 ASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSY 104
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDE------------------ 183
G++LH ALK + D FV +S V Y + G++ +R +FD+
Sbjct: 105 GVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGR 164
Query: 184 -------------MPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV--NDFTL 228
MP +VVSW+ +I G+ + G +AL +F +++ E + N+ T
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATF 224
Query: 229 SSVLRVCGASTL--LELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL 286
SVL C + LGKQIHG+ + + ++L+ +Y K G +E A F+++
Sbjct: 225 VSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI 284
Query: 287 QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG 346
+ + + WNA++ A A + + E+FE MKS V PN IT L +L AC+ + LV+ G
Sbjct: 285 RDKKVCAWNAIISALASNGRPKQALEMFEMMKS-SYVHPNGITLLAILTACARSKLVDLG 343
Query: 347 QHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCR 406
F + +Y I P S+HY +VDL+GRAG L DA I+ +P EP SV GALL C+
Sbjct: 344 IQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACK 403
Query: 407 IHGDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKK 462
IH +TEL + V ++ G V LS K + + GI+K
Sbjct: 404 IHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 232/477 (48%), Gaps = 48/477 (10%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + A + +L+ G ++ + I+ E+ +L+ +++ Y+K + +VF+S+
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
+ W++L++++A++ L AL F M G+ P+
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPN--------------------- 475
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGY 199
V + ++ + G++ A+++F +M N++SW+ M+ G
Sbjct: 476 --------------VITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGM 521
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSS 259
VQ G EEA+ LF + + E + N F+++ L C L +G+ IHG+ + SS
Sbjct: 522 VQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 260 CF-VASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMK 318
+ +SL+ +Y+KCG + A + F L + NAM+ A A + + L+ ++
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 640
Query: 319 SVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
VG +KP+ IT VL AC+HAG + + F + ++P +HY MVDLL AG+
Sbjct: 641 GVG-LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGE 699
Query: 379 LQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLSNX 438
+ A+++IEEMP +P + +L+ C TEL Y++ ++ E +SG V +SN
Sbjct: 700 TEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNA 759
Query: 439 XXXXXXXXXXXXXXKMLRDQGIKKETGLSWV----EEGNRVHTFAAGDRSHAKTVEI 491
+M++ +G+KK+ G SW+ EEG VH F A D++H + EI
Sbjct: 760 YAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEG--VHVFVANDKTHTRINEI 814
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 198/366 (54%), Gaps = 6/366 (1%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
+C AL SR RG+ H +++K+GLE ++ L + Y K + + + +VF+
Sbjct: 178 NVCKACGALKWSR-FGRGV--HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI 234
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
P R+A W++L+ + QN A+ F M + G+ P + T + A + + G
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
HA+A+ LD + +SL++ Y K G I YA VFD M ++VV+W+ +I GYVQ G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
E+A+ + Q++ E + + TL++++ + L+LGK++ +C + SF+S +A
Sbjct: 355 LVEDAIYMC-QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLA 413
Query: 264 SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGV 323
S+++ +Y+KCG++ A + F+ ++L +WN +L A A+ + LF M+ + GV
Sbjct: 414 STVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ-LEGV 472
Query: 324 KPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAV 383
PN IT+ ++ + G V++ + F L + GI P + TM++ + + G ++A+
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 384 QVIEEM 389
+ +M
Sbjct: 532 LFLRKM 537
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 181/378 (47%), Gaps = 6/378 (1%)
Query: 29 LLALTHSRSLRRGLQLHAHIIKTG--LETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR 86
L + R L G Q+HA I+K G + L+ FY+K + +F+ R
Sbjct: 77 LQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR 136
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+ +W+++I + L AL F +ML + PD+ ++P K+C AL G +H
Sbjct: 137 NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVH 196
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDE 206
+K+ VFVASSL DMY KCG + A VFDE+P RN V+W+ ++ GYVQ G++E
Sbjct: 197 GYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNE 256
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
EA+RLF + ++ V T+S+ L +E GKQ H + + +SL
Sbjct: 257 EAIRLFSD-MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSL 315
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
++ Y K G +E A F+ + +++ WN ++ Q + + M+ + +K +
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR-LEKLKYD 374
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
+T ++ A + ++ G+ + + E +T++D+ + G + DA +V
Sbjct: 375 CVTLATLMSAAARTENLKLGKE-VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 387 EEMPMEPTESVWGALLTG 404
+ +E +W LL
Sbjct: 434 DS-TVEKDLILWNTLLAA 450
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 207/431 (48%), Gaps = 35/431 (8%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + +LA + S +L G +HA +K + ++S + + Y K S+ +VF+ +
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT 324
Query: 84 PHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLP---------------------- 121
+ +W+S +S +A + L A + F M ++
Sbjct: 325 RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLT 384
Query: 122 ---------DDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCG 172
D+ L C+ +S + +G H + Y +V VA++L+DMY KCG
Sbjct: 385 LMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCG 444
Query: 173 EIGYARNVFDEMPH-RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSV 231
+ A F +M R+ VSW+ ++ G ++G E+AL F+ + VE + +TL+++
Sbjct: 445 TLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKP--SKYTLATL 502
Query: 232 LRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNL 291
L C L LGK IHG+ + + + +++ +YSKC + A + F+E R+L
Sbjct: 503 LAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDL 562
Query: 292 GMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFE 351
+WN+++ C ++ + FELF +++ GVKP+ +TFL +L AC G VE G YF
Sbjct: 563 ILWNSIIRGCCRNGRSKEVFELFMLLEN-EGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 352 LMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDT 411
M Y I P +HY M++L + G L + + MP +P + + C+ + +
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWS 681
Query: 412 ELASYVADRVF 422
+L ++ A R+
Sbjct: 682 KLGAWAAKRLM 692
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 204/409 (49%), Gaps = 41/409 (10%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISS 97
LR QLH ++K G L +++ Y K ++ + + +VF+ + S +W+ ++
Sbjct: 178 LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRR 237
Query: 98 FAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLD 157
+ + A+ F +ML + + P +H + + +C+ ++ VG +HA+A+K + D
Sbjct: 238 YLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVAD 297
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDE-------------------------------MPH 186
V++S+ DMY KC + AR VFD+ MP
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 187 RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQ 246
RN+VSW+ M+ GYV E +EAL F ++ +E +++ TL +L VC + +++GKQ
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALD-FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 247 IHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEEL-QVRNLGMWNAMLIACAQHA 305
HG+ ++ +D++ VA++L+ +Y KCG ++ A F ++ ++R+ WNA+L A+
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 306 HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ--HYFELMKKDYGIEPGS 363
+ + FE M+ KP+ T +L C++ + G+ H F L++ Y I+
Sbjct: 477 RSEQALSFFEGMQV--EAKPSKYTLATLLAGCANIPALNLGKAIHGF-LIRDGYKIDVVI 533
Query: 364 QHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTE 412
+ MVD+ + A++V +E +W +++ GC +G ++
Sbjct: 534 R--GAMVDMYSKCRCFDYAIEVFKEAATRDL-ILWNSIIRGCCRNGRSK 579
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 185/402 (46%), Gaps = 32/402 (7%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
++ +H++ L + I Y K + + ++F P R +W+++I++ AQN
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG 141
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
+ FR+M R G+ + KSC + + + LH +K Y +V + +
Sbjct: 142 VSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLET 201
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
S+VD+Y KC + AR VFDE+ + + VSW+ ++ Y+++G ++EA+ +F ++L E +V
Sbjct: 202 SIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML-ELNVR 260
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
+ T+SSV+ C S LE+GK IH K S + V++S+ +Y KC +E A +
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 283 FEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF--------------- 327
F++ + ++L W + + A T ELF+ M V N
Sbjct: 321 FDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEAL 380
Query: 328 ---------------ITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDL 372
+T + +L CS V+ G+ + + +G + ++D+
Sbjct: 381 DFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR-HGYDTNVIVANALLDM 439
Query: 373 LGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELA 414
G+ G LQ A +M E W ALLTG G +E A
Sbjct: 440 YGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 133/271 (49%), Gaps = 4/271 (1%)
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+F+ + ++ Y KCG + AR +F+EMP R+ SW+ +I Q G +E R+F++ +
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRR-MN 154
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+ V + + + VL+ CG L L +Q+H K + + + +S++ +Y KC +
Sbjct: 155 RDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMS 214
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
A + F+E+ + WN ++ + + +F +M + V+P T V+ AC
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL-NVRPLNHTVSSVMLAC 273
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESV 397
S + +E G+ + K + + ++ D+ + +L+ A +V ++ + +S
Sbjct: 274 SRSLALEVGKVIHAIAVK-LSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS- 331
Query: 398 WGALLTGCRIHGDTELASYVADRVFEQGHVS 428
W + ++G + G T A + D + E+ VS
Sbjct: 332 WTSAMSGYAMSGLTREARELFDLMPERNIVS 362
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 231 VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRN 290
+ R C + L+ +++ S F+ + I Y KCG V+ A + FEE+ R+
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
G WNA++ ACAQ+ ++ F +F +M GV+ +F VL +C GL+ +
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNR-DGVRATETSFAGVLKSC---GLILDLRLLR 182
Query: 351 EL--MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
+L YG ++VD+ G+ + DA +V +E+ + P++ W ++
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV 235
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 204/400 (51%), Gaps = 4/400 (1%)
Query: 40 RGLQ-LHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
+GL+ +H I +GL + ++ YSK L + ++F S P W+ +I +
Sbjct: 123 KGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY 182
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
++ F M G P+ + + S + V S+HA LK
Sbjct: 183 GCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
+V +LV+MY++C I A +VF+ + ++V+ S +I GY + G +EAL LF ++ +
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
+ ++ VL C + GK++H + + + V S+LI +YSKCG ++
Sbjct: 303 GK-KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKC 361
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A F + +N+ +N++++ H + FE F ++ +G + P+ ITF +L C
Sbjct: 362 AMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLI-PDEITFSALLCTCC 420
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
H+GL+ KGQ FE MK ++GIEP ++HY MV L+G AGKL++A + + + +
Sbjct: 421 HSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGIL 480
Query: 399 GALLTGCRIHGDTELASYVADRVFEQG-HVSSGLNVLLSN 437
GALL+ C +H +T LA VA+ + + G S V+LSN
Sbjct: 481 GALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSN 520
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 175/385 (45%), Gaps = 4/385 (1%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
+LH+ + K+ L P + L FY+ S+ ++F+ P RS W+S+I ++A+
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
L F Q+LR PD+ A+ + +H +A+ + D S
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGS 145
Query: 163 SLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
++V Y+K G I A +F +P ++ W+ MI GY G ++ + LF ++
Sbjct: 146 AIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF-NLMQHRGHQ 204
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
N +T+ ++ +LL + +H +C K + DS +V +L+++YS+C + A
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 283 FEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGL 342
F + +L ++++ ++ + LF +++ + G KP+ + VL +C+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR-MSGKKPDCVLVAIVLGSCAELSD 323
Query: 343 VEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALL 402
G+ + + G+E + + ++D+ + G L+ A+ + +P E + +L+
Sbjct: 324 SVSGKEVHSYVIR-LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLI 381
Query: 403 TGCRIHGDTELASYVADRVFEQGHV 427
G +HG A + E G +
Sbjct: 382 LGLGLHGFASTAFEKFTEILEMGLI 406
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 241/514 (46%), Gaps = 37/514 (7%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIK-TGLETIPLLSHHLINFYSKTQLPNSSLQVFNS 82
TI + L L G ++H++I++ + L + + LI+FY++ +++ F+
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSL 391
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
+ +W++++ +FA + L+ +L + D + + K C + I
Sbjct: 392 MSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 143 LSLHALALKTAYHLD---VFVASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMIYG 198
+H ++K D + ++L+D YAKCG + YA +F + R +VS++ ++ G
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 199 YVQLGEDEEALRLFKQVLV-------------------EEDVGV-----------NDFTL 228
YV G ++A LF ++ E +GV N T+
Sbjct: 512 YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTI 571
Query: 229 SSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV 288
++L VC L L +Q HG+ + + +L+ +Y+KCG+++ AY F+
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDAR 630
Query: 289 RNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQH 348
R+L M+ AM+ A H ++ M +KP+ + +L AC HAGL++ G
Sbjct: 631 RDLVMFTAMVAGYAVHGRGKEALMIYSHMTE-SNIKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 349 YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIH 408
++ ++ +G++P + YA VDL+ R G+L DA + +MP+EP ++WG LL C +
Sbjct: 690 IYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTY 749
Query: 409 GDTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSW 468
+L VA+ + + +G +VL+SN +++ + +KK G SW
Sbjct: 750 NRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSW 809
Query: 469 VEEGNRVHTFAAGDRSHAKTVEIYNKLEELGDEM 502
+E + + F +GD SH + I++ + L +M
Sbjct: 810 LEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQM 843
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 145/272 (53%), Gaps = 12/272 (4%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQL--PNSSLQVFNSSPHRSATTWSSLISSF 98
G +H++IIK GLE L+ + L++ Y+K P++ F+ + +W+++I+ F
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA-YTAFDGIADKDVVSWNAIIAGF 199
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS---SIHVGLSLHALALKTAY- 154
++N++ A F ML+ P+ + CA++ + G +H+ ++ ++
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQ 214
VFV +SLV Y + G I A ++F M +++VSW+ +I GY E +A +LF
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 215 VLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSF---DSSCFVASSLISLYS 271
++ + DV + T+ S+L VC T L GK+IH + + S+ D+S V ++LIS Y+
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS--VGNALISFYA 377
Query: 272 KCGAVEGAYQAFEELQVRNLGMWNAMLIACAQ 303
+ G AY AF + +++ WNA+L A A
Sbjct: 378 RFGDTSAAYWAFSLMSTKDIISWNAILDAFAD 409
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 171/389 (43%), Gaps = 11/389 (2%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
++R + + A L G LH + K G +S ++N Y+K + + ++F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 81 NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQM-LRIGLLPDDHILPTAAKSCAALSSI 139
W+ +++ + + + FF+ M P C L
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEI-GYARNVFDEMPHRNVVSWSGMIYG 198
+ G S+H+ +K D V ++LV MYAK G I A FD + ++VVSW+ +I G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA---STLLELGKQIHGWCFKTS 255
+ + +A R F ++++E N T+++VL VC + + G+QIH + + S
Sbjct: 199 FSENNMMADAFRSF-CLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRS 257
Query: 256 F-DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELF 314
+ + FV +SL+S Y + G +E A F + ++L WN ++ A + + F+LF
Sbjct: 258 WLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLF 317
Query: 315 EQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFE-LMKKDYGIEPGSQHYATMVDLL 373
+ G V P+ +T + +L C+ + G+ +++ Y +E S A ++
Sbjct: 318 HNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNA-LISFY 376
Query: 374 GRAGKLQDAVQVIEEMPMEPTESVWGALL 402
R G A M + S W A+L
Sbjct: 377 ARFGDTSAAYWAFSLMSTKDIIS-WNAIL 404
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 135/313 (43%), Gaps = 35/313 (11%)
Query: 111 FRQMLRI--GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMY 168
F Q R+ G D + K+CA++S + G +LH K + V+ S+++MY
Sbjct: 7 FVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMY 66
Query: 169 AKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTL 228
AKC + + +F +M + V W+ ++ G + + E +R FK + ++ + T
Sbjct: 67 AKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTF 125
Query: 229 SSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAV-EGAYQAFEELQ 287
+ VL +C GK +H + K + V ++L+S+Y+K G + AY AF+ +
Sbjct: 126 AIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIA 185
Query: 288 VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ 347
+++ WNA++ +++ F F M +PN+ T VL C+
Sbjct: 186 DKDVVSWNAIIAGFSENNMMADAFRSFCLMLK-EPTEPNYATIANVLPVCAS-------- 236
Query: 348 HYFELMKKDYGIEPGSQHYA----------------TMVDLLGRAGKLQDAVQVIEEMPM 391
M K+ G Q ++ ++V R G++++A + M
Sbjct: 237 -----MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS 291
Query: 392 EPTESVWGALLTG 404
+ S W ++ G
Sbjct: 292 KDLVS-WNVVIAG 303
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 180/334 (53%), Gaps = 5/334 (1%)
Query: 139 IHVGLSLHALALKTAY-HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIY 197
+HV A AL + + D + +V YA G + AR+ F++ P ++ VSW+ +I
Sbjct: 323 VHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIA 382
Query: 198 GYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
Y + + +EA+ LF ++ +E + + TL+S+L L LG Q+H KT
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGE-KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI- 440
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQV-RNLGMWNAMLIACAQHAHTNRTFELFEQ 316
V ++LI++YS+CG + + + F+E+++ R + WNAM+ A H + + LF
Sbjct: 441 PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGS 500
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
MKS G+ P+ ITF+ VL AC+HAGLV++ + F M Y IEP +HY+++V++
Sbjct: 501 MKS-NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQ 559
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
G+ ++A+ +I MP EP ++VWGALL CRI+ + LA A+ + SS VLL
Sbjct: 560 GQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLY 619
Query: 437 NXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
N + + IKKE G SWV+
Sbjct: 620 NMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 5/225 (2%)
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F +P + +W+S+I+++ +N A+D F +M G PD H L + + L ++
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP-HRNVVSWSGMIYG 198
+G+ +H + +KT DV V ++L+ MY++CGEI +R +FDEM R V++W+ MI G
Sbjct: 426 RLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGK-QIHGWCFKTSFD 257
Y G EAL LF + + + T SVL C + L++ K Q +
Sbjct: 485 YAFHGNASEALNLFGS-MKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIE 543
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIAC 301
SSL+++ S G E A + + +W A+L AC
Sbjct: 544 PQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDAC 588
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 165/375 (44%), Gaps = 45/375 (12%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+I+ Y+K + +L +F P R+A +WS++I+ F QN A+ FR+M P
Sbjct: 142 MISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM------PV 195
Query: 123 DHILPTAAKSCAALSSIHVGLSLHAL----ALKTAYHLDVFVASSLVDMYAKCGEIGYAR 178
P A + + + + L +L + V+ ++L+ Y + G++ AR
Sbjct: 196 KDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAAR 255
Query: 179 NVFDEMPH---------------RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV 223
+FD++P +NVVSW+ MI Y+++G+ A LF Q+ + +
Sbjct: 256 CLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISW 315
Query: 224 NDFT--LSSVLRVCGASTLLE--LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
N V R+ A L + H W + ++S Y+ G VE A
Sbjct: 316 NTMIDGYVHVSRMEDAFALFSEMPNRDAHSW-------------NMMVSGYASVGNVELA 362
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSH 339
FE+ ++ WN+++ A ++ +LF +M ++ G KP+ T +L A +
Sbjct: 363 RHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM-NIEGEKPDPHTLTSLLSASTG 421
Query: 340 AGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWG 399
+ G +++ K + P + ++ + R G++ ++ ++ +EM ++ W
Sbjct: 422 LVNLRLGMQMHQIVVKT--VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWN 479
Query: 400 ALLTGCRIHGDTELA 414
A++ G HG+ A
Sbjct: 480 AMIGGYAFHGNASEA 494
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 61/348 (17%)
Query: 79 VFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSS 138
+F R+ TW+++IS + + + A F M + ++ + ++ + SC +
Sbjct: 62 IFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMI-SGYVSCGGIRF 120
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
+ L D F ++++ YAK IG A +F++MP RN VSWS MI G
Sbjct: 121 LEEARKL----FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITG 176
Query: 199 YVQLGEDEEALRLFKQVLVEEDVG--------VNDFTLSSVLRVCGASTLLELGK----- 245
+ Q GE + A+ LF+++ V++ + + LS V G L G+
Sbjct: 177 FCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVY 236
Query: 246 -----------------------QI-------HGWCFKTSFDSSCFVASSLISLYSKCGA 275
QI HG F+ F + +S+I Y K G
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD 296
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLY 335
V A F++++ R+ WN M+ + F LF +M + N + +
Sbjct: 297 VVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMM-----VS 351
Query: 336 ACSHAGLVEKGQHYFELMKKDYGIEPGS--------QHYATMVDLLGR 375
+ G VE +HYFE + + + S + Y VDL R
Sbjct: 352 GYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 170 KCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLS 229
+ G I AR++F+++ RN V+W+ MI GYV+ E +A +LF V+ + DV V T+
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLF-DVMPKRDV-VTWNTMI 109
Query: 230 SVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVR 289
S CG LE +++ F F +++IS Y+K + A FE++ R
Sbjct: 110 SGYVSCGGIRFLEEARKL----FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ-- 347
N W+AM+ Q+ + LF +M V P LC L AGL++ +
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKM-PVKDSSP-----LCALV----AGLIKNERLS 215
Query: 348 -------HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP 390
Y L+ G E Y T++ G+ G+++ A + +++P
Sbjct: 216 EAAWVLGQYGSLVS---GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP 262
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSS 83
T+ + L A T +LR G+Q+H ++KT + +P + + LI YS+ S ++F+
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEM 469
Query: 84 P-HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
R TW+++I +A + AL+ F M G+ P + +CA H G
Sbjct: 470 KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACA-----HAG 524
Query: 143 LSLHA----LALKTAYHLDVFVA--SSLVDMYAKCGEIGYARNVFDEMP 185
L A +++ + Y ++ + SSLV++ + G+ A + MP
Sbjct: 525 LVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP 573
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 207/403 (51%), Gaps = 6/403 (1%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPL-LSHHLINFYSKTQLPNSSLQV 79
N T C + +H R + G QLH+ ++K+G + +++ L+++YS + S++
Sbjct: 212 NGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRS 271
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
FN+ P + +W+S++S A +LD F +M G P + C+ S I
Sbjct: 272 FNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDI 331
Query: 140 HVGLSLHALALKTAYHLD-VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYG 198
G +H LK + + + V S+L+DMY KC I + ++ +P N+ + ++
Sbjct: 332 QSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTS 391
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLEL--GKQIHGWCFKTSF 256
+ G ++ + +F ++++E G+++ TLS+VL+ S L +H K+ +
Sbjct: 392 LMHCGITKDIIEMFG-LMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGY 450
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQ 316
+ V+ SLI Y+K G E + + F+EL N+ +++ A++ ++ +
Sbjct: 451 AADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLRE 510
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
M + + P+ +T L VL CSH+GLVE+G+ F+ ++ YGI PG + YA MVDLLGRA
Sbjct: 511 MDRMNLI-PDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRA 569
Query: 377 GKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVAD 419
G ++ A +++ + + W +LL CRIH + + A+
Sbjct: 570 GLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAE 612
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 165/335 (49%), Gaps = 12/335 (3%)
Query: 75 SSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCA 134
S+ + F+ R T++ LIS ++ A++ + +M+ GL P+ C+
Sbjct: 64 SAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCS 123
Query: 135 ALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSG 194
G+ +H + + ++FV S+LV +YA + A +FDEM RN+ +
Sbjct: 124 DELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNL 183
Query: 195 MIYGYVQLGEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCF 252
++ + Q GE + RLF+ L E GV N T ++R C L+ GKQ+H
Sbjct: 184 LLRCFCQTGESK---RLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVV 240
Query: 253 KTSFD-SSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTF 311
K+ ++ S+ FVA+ L+ YS CG + G+ ++F + +++ WN+++ CA + +
Sbjct: 241 KSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSL 300
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHY-ATMV 370
+LF +M+ G +P+ F+ L CS ++ G+ + K G + S H + ++
Sbjct: 301 DLFSKMQ-FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLK-MGFDVSSLHVQSALI 358
Query: 371 DLLGRAGKLQDAVQVIEEMP---MEPTESVWGALL 402
D+ G+ ++++ + + +P +E S+ +L+
Sbjct: 359 DMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLM 393
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 183/429 (42%), Gaps = 39/429 (9%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
R G+Q+H +I G + L+ Y+ +L + +L++F+ R+ + L+ F
Sbjct: 129 REGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCF 188
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL-D 157
Q + + +M G+ + + C+ ++ G LH+L +K+ +++ +
Sbjct: 189 CQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISN 248
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLF-KQVL 216
+FVA+ LVD Y+ CG++ + F+ +P ++V+SW+ ++ G ++L LF K
Sbjct: 249 IFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQF 308
Query: 217 VEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD-SSCFVASSLISLYSKCGA 275
+ + F S L C ++ ++ GKQIH + K FD SS V S+LI +Y KC
Sbjct: 309 WGKRPSIRPFM--SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNG 366
Query: 276 VEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVG-GVKPNFITFL--- 331
+E + ++ L NL N+++ + T E+F M G G+ ++ +
Sbjct: 367 IENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA 426
Query: 332 -----------CVLYACSHA----------------GLVEKGQHYFELMKKDYGIEPGSQ 364
C L C + GQ+ D P
Sbjct: 427 LSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIF 486
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEMP---MEPTESVWGALLTGCRIHGDTELASYVADRV 421
++++ R G D V+++ EM + P E ++L+GC G E + D +
Sbjct: 487 CLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL 546
Query: 422 FEQGHVSSG 430
+ +S G
Sbjct: 547 ESKYGISPG 555
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 223/499 (44%), Gaps = 60/499 (12%)
Query: 35 SRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKT---QLPNSSLQVFNSSPHRSATTW 91
S S+ Q+HA +I +G NF+ + +L SS + +SS + + +
Sbjct: 32 SNSITHLFQVHARLITSG------------NFWDSSWAIRLLKSSSRFGDSS--YTVSIY 77
Query: 92 SSLISSFAQNDL---------PHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
S+ + N + P AL F+ +LR G +PD + + + G
Sbjct: 78 RSIGKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSG 137
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQL 202
H A+K + V +SL+ MY CG + A+ +F E+P R++VSW+ +I G V+
Sbjct: 138 KMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRN 197
Query: 203 GEDEEALRLFKQV---------------LVEEDVGV---------------NDFTLSSVL 232
G+ A +LF ++ L + GV N+ TL +L
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 233 RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG 292
CG S L+ G+ +H +T +SS + ++LI +Y KC V A + F+ L +RN
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 293 MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFEL 352
WN M++A H ELFE M + G ++P+ +TF+ VL C+ AGLV +GQ Y+ L
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMIN-GMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Query: 353 MKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME---PTESVWGALLTGCRIHG 409
M ++ I+P H M +L AG ++A + ++ +P E P + W LL+ R G
Sbjct: 377 MVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
Query: 410 DTELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWV 469
+ L +A + E ++ LL N +M++++ I + G V
Sbjct: 437 NPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLV 496
Query: 470 EEGNRVHTFAAGDRSHAKT 488
+ VH G + K
Sbjct: 497 DLKEIVHGLRLGCKEAEKV 515
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%)
Query: 20 GNYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQV 79
GN T+ L A S L+ G +HA +I+T L + ++ LI+ Y K + + ++
Sbjct: 248 GNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRI 307
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F+S R+ TW+ +I + + P L+ F M+ L PD+ CA +
Sbjct: 308 FDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLV 367
Query: 140 HVGLSLHAL 148
G S ++L
Sbjct: 368 SQGQSYYSL 376
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 197/427 (46%), Gaps = 36/427 (8%)
Query: 187 RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDF-----------TLSSVLRVC 235
R V S++ M+ + Q E L KQV + E + V D L + ++C
Sbjct: 64 RRVSSYAQMVNNH-QSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLC 122
Query: 236 GASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWN 295
G LE + +H C T D+ + ++I +YS C + + A F E+ RN W
Sbjct: 123 GEVEALEEARVVHD-CI-TPLDARSY--HTVIEMYSGCRSTDDALNVFNEMPKRNSETWG 178
Query: 296 AMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKK 355
M+ A++ R ++F + G KP+ F V +AC G + +G +FE M +
Sbjct: 179 TMIRCLAKNGEGERAIDMFTRFIEEGN-KPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 356 DYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELAS 415
DYG+ + Y ++++L G L +A+ +E M +EP+ +W L+ C + G EL
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 416 YVADRV--FEQGHVS--SGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEE 471
A+ + + +S S ++ + +M+RD K
Sbjct: 298 RFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKK---------- 347
Query: 472 GNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHS 531
R+H F AGD SH TV + L+ +M G+V T V EEK + + + S
Sbjct: 348 --RMHEFRAGDTSHLGTVSAFRSLKV---QMLDIGFVPATRVCFVTVEEEEKEEQLLFRS 402
Query: 532 ERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGK 591
+LA A +I RP+ V++N+R C D H K IS ITGR LI RD ++H +++G
Sbjct: 403 NKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGV 462
Query: 592 CTCGDYW 598
C+C DYW
Sbjct: 463 CSCKDYW 469
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 61 HHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL 120
H +I YS + + +L VFN P R++ TW ++I A+N A+D F + + G
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 121 PDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS--SLVDMYAKCGEIGYAR 178
PD I +C ++ I+ GL LH ++ Y + + + ++++M A CG + A
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGL-LHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEAL 265
Query: 179 NVFDEMP-HRNVVSWSGM-----IYGYVQLGE 204
+ + M +V W + + GY++LG+
Sbjct: 266 DFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 42/269 (15%)
Query: 60 SHHLINFYSKTQLPNSSLQVFNSSP--HRSATTWSSLISSFAQ--NDLPHLALDFF---- 111
SH+LI T+ SSLQ + P + +SS+AQ N+ + ++ F
Sbjct: 34 SHNLI-----TKTITSSLQDVLTRPIWQNRSFVQCRRVSSYAQMVNNHQSVTIETFDALC 88
Query: 112 -----RQMLRI-------GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
R+ L + G + D L AK C + ++ +H LD
Sbjct: 89 KQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVH----DCITPLDAR 144
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
++++MY+ C A NVF+EMP RN +W MI + GE E A+ +F + +EE
Sbjct: 145 SYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTR-FIEE 203
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWC-FKTSFDSSCFVAS-----SLISLYSKC 273
+ +V C + +G G F++ + V S ++I + + C
Sbjct: 204 GNKPDKEIFKAVFFAC-----VSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAAC 258
Query: 274 GAVEGAYQAFEELQVR-NLGMWNAMLIAC 301
G ++ A E + V ++ MW ++ C
Sbjct: 259 GHLDEALDFVERMTVEPSVEMWETLMNLC 287
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 170/368 (46%), Gaps = 21/368 (5%)
Query: 233 RVCGASTLLELGKQIHGWCFKTSFDSSCFVAS--SLISLYSKCGAVEGAYQAFEELQVRN 290
++CG LE + +H C + S C V + ++I +YS C +V+ A + FEE+ N
Sbjct: 127 KLCGKPEALEAARVVHE-CI-IALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWN 184
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
G M+ + + +LF + K G KPN F V C+ G V++G F
Sbjct: 185 SGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN-KPNGEIFNQVFSTCTLTGDVKEGSLQF 243
Query: 351 ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGD 410
+ M ++YGI P +HY ++ +L +G L +A+ +E MPMEP+ VW L+ R+HGD
Sbjct: 244 QAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGD 303
Query: 411 TELASYVADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
EL DR E L+ +KKE S
Sbjct: 304 VEL----GDRCAE----------LVEKLDATRLDKVSSAGLVATKASDFVKKEP--STRS 347
Query: 471 EGNRVHTFAAGDRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYH 530
E TF D SH + IY L L ++ + GYV DT + + E + I +
Sbjct: 348 EPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGY 407
Query: 531 SERLAIAFGLITFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDG 590
E +A+ L+ I ++ N+R+ GDCH +K +S ITGR +I RD +H F++G
Sbjct: 408 REEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNG 467
Query: 591 KCTCGDYW 598
C C + W
Sbjct: 468 VCRCNNLW 475
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 205/442 (46%), Gaps = 44/442 (9%)
Query: 41 GLQLHAHIIKTGLET-IPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFA 99
G +H+ ++K GLE ++ + LI+ Y K + ++ VF + +W+++++S +
Sbjct: 175 GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 100 QNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
+N L L FF QM P+ D
Sbjct: 235 RNGKLELGLWFFHQM------PNP---------------------------------DTV 255
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE 219
+ L+D + K G+ A V +MP+ N SW+ ++ GYV + EA F + +
Sbjct: 256 TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK-MHSS 314
Query: 220 DVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGA 279
V ++++LS VL A ++ G IH K DS VAS+LI +YSKCG ++ A
Sbjct: 315 GVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHA 374
Query: 280 YQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSH 339
F + +NL +WN M+ A++ + +LF Q+K +KP+ TFL +L CSH
Sbjct: 375 ELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSH 434
Query: 340 AGL-VEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
+ +E YFE+M +Y I+P +H +++ +G+ G++ A QVI+E W
Sbjct: 435 CEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAW 494
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVSSG--LNVLLSNXXXXXXXXXXXXXXXKMLR 456
ALL C D + A VA ++ E G L +++SN K++R
Sbjct: 495 RALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMR 554
Query: 457 DQGIKKETGLSWVEEGNRVHTF 478
+ G+ KE G SW++ + ++
Sbjct: 555 ESGVLKEVGSSWIDSRTKCSSY 576
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 51/322 (15%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFR---QMLRIGLLPDDHILPTAAKSCAALSSIHVGL 143
S+ +WS+++ + A+ ++ R +++ G PD L + + +
Sbjct: 20 SSNSWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCR 75
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLG 203
LH K + + +++SL+ Y + A VFDEMP +V+SW+ ++ GYVQ G
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDS-SCFV 262
+E + LF + L DV N+F+ ++ L C L LG IH K + + V
Sbjct: 136 RFQEGICLFLE-LHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+ LI +Y KCG ++ A F+ ++ ++ WNA++ +C+++ F QM
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----- 249
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
PN P + Y ++D ++G +A
Sbjct: 250 --PN----------------------------------PDTVTYNELIDAFVKSGDFNNA 273
Query: 383 VQVIEEMPMEPTESVWGALLTG 404
QV+ +MP P S W +LTG
Sbjct: 274 FQVLSDMP-NPNSSSWNTILTG 294
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 151/370 (40%), Gaps = 44/370 (11%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
QLH ++ K G + LS+ L+ FY + + +VF+ P +W+SL+S + Q+
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL-DVFVA 161
+ F ++ R + P++ A +CA L +G +H+ +K +V V
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
+ L+DMY KCG + A VF M ++ VSW+ ++ + G+ E L F Q+ + V
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 255
Query: 222 GVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQ 281
N+ LI + K G A+Q
Sbjct: 256 TYNE----------------------------------------LIDAFVKSGDFNNAFQ 275
Query: 282 AFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
++ N WN +L + E F +M S GV+ + + VL A +
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHS-SGVRFDEYSLSIVLAAVAALA 334
Query: 342 LVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGAL 401
+V G K G++ + ++D+ + G L+ A + MP + VW +
Sbjct: 335 VVPWGSLIHACAHK-LGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRK-NLIVWNEM 392
Query: 402 LTGCRIHGDT 411
++G +GD+
Sbjct: 393 ISGYARNGDS 402
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 228 LSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ 287
L +LRV G + L +Q+HG+ K F S+ +++SL+ Y ++E A++ F+E+
Sbjct: 58 LVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP 117
Query: 288 VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ 347
++ WN+++ Q LF ++ V PN +F L AC+ L G
Sbjct: 118 DPDVISWNSLVSGYVQSGRFQEGICLFLELHR-SDVFPNEFSFTAALAACARLHLSPLGA 176
Query: 348 HYFELMKKDYGIEPGSQHYAT-MVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCR 406
+ K G+E G+ ++D+ G+ G + DAV V + M + T S W A++ C
Sbjct: 177 CIHSKLVK-LGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCS 234
Query: 407 IHGDTELA 414
+G EL
Sbjct: 235 RNGKLELG 242
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 204/468 (43%), Gaps = 54/468 (11%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G +HA +K GL + L+ YS+ + + F+ ++ +W+SL+ + +
Sbjct: 123 GKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLE 182
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAK------SCAALSSIHVGLSLHALALKTAY 154
+ A F ++ + + I+ + AK +C+ S A+ LK+
Sbjct: 183 SGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFS---------AMPLKSPA 233
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGE---------- 204
++ + Y C E+ AR FD MP +N VSW MI GY +LG+
Sbjct: 234 SWNILIGG-----YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRL 288
Query: 205 ---------------------DEEALRLFKQVLVEED-VGVNDFTLSSVLRVCGASTLLE 242
++AL+LF Q+L + ++ TLSSV+
Sbjct: 289 MSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS 348
Query: 243 LGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACA 302
G + + + +++SLI LY K G A++ F L ++ ++AM++ C
Sbjct: 349 FGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCG 408
Query: 303 QHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPG 362
+ LF M + PN +TF +L A SH+GLV++G F MK D+ +EP
Sbjct: 409 INGMATEANSLFTAMIE-KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPS 466
Query: 363 SQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVF 422
+ HY MVD+LGRAG+L++A ++I+ MPM+P VWGALL +H + E
Sbjct: 467 ADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCV 526
Query: 423 EQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVE 470
+ +G L+ ++++ + K G SWVE
Sbjct: 527 KLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 186/403 (46%), Gaps = 38/403 (9%)
Query: 38 LRRGLQLHAHIIKTGLETI-PLLSHHLINF---YSKTQLP--NSSLQVFNSSPHRSATTW 91
L + Q+HA ++ + P+L H ++F +S+ + L+ FN + +W
Sbjct: 16 LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNG---HDSFSW 72
Query: 92 SSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALK 151
L+ +Q+ +D + M G+ P H + + ++C + ++ G +HA ALK
Sbjct: 73 GCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALK 132
Query: 152 TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRL 211
V+V + LV +Y++ G I A+ FD++ +N VSW+ +++GY++ GE +EA R+
Sbjct: 133 NGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRV 192
Query: 212 FKQVLVEEDVGVNDFTLSSVLR------VCGASTLLELGKQIHGW---------CFKTSF 256
F ++ E+D + +SS + C + + L K W C +
Sbjct: 193 FDKI-PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPL-KSPASWNILIGGYVNCREMKL 250
Query: 257 DSSCFVAS---------SLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHT 307
+ F A ++IS Y+K G V+ A + F + ++ +++AM+ Q+
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 308 NRTFELFEQMKSVGG-VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHY 366
+LF QM ++P+ IT V+ A S G G + E ++GI+
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT-WVESYITEHGIKIDDLLS 369
Query: 367 ATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHG 409
+++DL + G A ++ + + T S + A++ GC I+G
Sbjct: 370 TSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGING 411
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 214/473 (45%), Gaps = 70/473 (14%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQND 102
QLH+H +G LL H N + L +FN L+ ++ +
Sbjct: 55 QLHSHFTTSGF----LLLHQKQN--------SGKLFLFNP-----------LLRCYSLGE 91
Query: 103 LPHLALDFFRQMLRIGLLPD-DHILPT----------AAKSCAALSSIHVGLSLHALALK 151
P A + Q+ R+ L D + LP A S S+ +G+ LH L LK
Sbjct: 92 TPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLK 151
Query: 152 TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRN----------------------- 188
+ V+V ++LV MY G + A VFDEMP RN
Sbjct: 152 LGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCF 211
Query: 189 --------VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTL 240
VVSW+ +I GY ++ + +EA+ LF +++ + + N+ T+ ++L
Sbjct: 212 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 271
Query: 241 LELGKQIHGWCFKTSF-DSSCFVASSLISLYSKCGAVEGAYQAFEELQ--VRNLGMWNAM 297
L++ +H + K F V +SLI Y+KCG ++ A++ F E+ +NL W M
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKG-QHYFELMKKD 356
+ A A H +F+ M+ +G +KPN +T + VL ACSH GL E+ +F M +
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMERLG-LKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 357 YGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASY 416
Y I P +HY +VD+L R G+L++A ++ E+P+E VW LL C ++ D ELA
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 417 VADRVFEQGHVSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWV 469
V ++ E G VL+SN K + +G+ K G S V
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 171/343 (49%), Gaps = 39/343 (11%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPD 122
+I ++K + ++ + F+ P +S +W++++S +AQN AL F MLR+G+ P+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 123 DHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKC----------- 171
+ +C+ + + SL L + L+ FV ++L+DM+AKC
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 172 ---------------------GEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALR 210
G++ AR +FD MP RNVVSW+ +I GY G+ A+
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
F+ ++ D ++ T+ SVL CG LELG I + K + SLI +Y
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 271 SKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF 330
++ G + A + F+E++ R++ +N + A A + T L +MK G++P+ +T+
Sbjct: 444 ARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD-EGIEPDRVTY 502
Query: 331 LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLL 373
VL AC+ AGL+++GQ F+ ++ P + HYA M DLL
Sbjct: 503 TSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 168/404 (41%), Gaps = 74/404 (18%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSF 98
R G+ A + K G P + + +++ Y K + S+ +VF+ R + W+ +IS +
Sbjct: 118 RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY 177
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
+ A F ++P++ DV
Sbjct: 178 WKWGNKEEACKLF------DMMPEN---------------------------------DV 198
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
+ ++ +AK ++ AR FD MP ++VVSW+ M+ GY Q G E+ALRLF +L
Sbjct: 199 VSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML-R 257
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
V N+ T V+ C L + + + +CFV ++L+ +++KC ++
Sbjct: 258 LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQS 317
Query: 279 AYQAFEELQV-RNLGMWNAMLIA----------------------------CAQHAHTNR 309
A + F EL RNL WNAM+ A +AH +
Sbjct: 318 ARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQ 377
Query: 310 ---TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHY 366
E FE M G KP+ +T + VL AC H +E G + ++K+ I+ Y
Sbjct: 378 AALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKLNDSGY 436
Query: 367 ATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGD 410
+++ + R G L +A +V +EM S + L T +GD
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVS-YNTLFTAFAANGD 479
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 53/390 (13%)
Query: 43 QLHAHIIKTGLETIPLLSH---HLINFYSKTQLPNSSLQ-VFNSSPHRSATTWSSLISSF 98
Q+HA +I ++P S+ +I+ ++ + P+ + +F+S + +S+ F
Sbjct: 24 QIHAQLIV--FNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYF 81
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
++ D+ + L + Q R G++PD P KS G+ AL K + D
Sbjct: 82 SKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDP 136
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
+V + ++DMY K + AR VFD++ R W+ MI GY + G EEA +LF ++ E
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF-DMMPE 195
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
DV W + +I+ ++K +E
Sbjct: 196 NDV--------------------------VSW-------------TVMITGFAKVKDLEN 216
Query: 279 AYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
A + F+ + +++ WNAML AQ+ T LF M + GV+PN T++ V+ ACS
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL-GVRPNETTWVIVISACS 275
Query: 339 HAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVW 398
+ +L+ + + ++D+ + +Q A ++ E+ + W
Sbjct: 276 FRADPSLTRSLVKLIDEK-RVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTW 334
Query: 399 GALLTGCRIHGDTELASYVADRVFEQGHVS 428
A+++G GD A + D + ++ VS
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVVS 364
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 170/336 (50%), Gaps = 6/336 (1%)
Query: 131 KSCAALSSIHVGLSLHALALKT-AYHLDV-FVASSLVDMYAKCGEIGYARNVFDEMPHRN 188
K+C+ + ++ G H L +++ ++ D+ V +SL+ MY++C ++ +A VF ++ +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 189 VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIH 248
+ +W+ +I G+ EE L K++L+ N TL+S+L + L+ GK+ H
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 249 GWCFKTSFDSSCFVA-SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHT 307
+ + C + +SL+ +Y+K G + A + F+ ++ R+ + +++ +
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
F+ M G+KP+ +T + VL ACSH+ LV +G F M+ +GI +HY+
Sbjct: 507 EVALAWFKDMDR-SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYS 565
Query: 368 TMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADR-VFEQGH 426
MVDL RAG L A + +P EP+ ++ LL C IHG+T + + AD+ + E
Sbjct: 566 CMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKP 625
Query: 427 VSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKK 462
G +LL++ +L D G++K
Sbjct: 626 EHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 179/385 (46%), Gaps = 37/385 (9%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G QLHAH I +GLE +L L+ FYS L + + + +S W+ LI S+ +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
N ++ +++M+ G+ D+ P+ K+CAAL G +H +++ +++V
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE- 219
++L+ MY + G++ AR +FD M R+ VSW+ +I Y + EA +L ++ +
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 220 ---------------------------------DVGVNDFTLSSVLRVCGASTLLELGKQ 246
+V + + + L+ C L+ GK
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 247 IHGWCFKT-SFDSSC-FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH 304
H ++ SF V +SLI++YS+C + A+ F++++ +L WN+++ A +
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 305 AHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQ 364
+ T L ++M + G PN IT +L + G ++ G+ + + + +
Sbjct: 402 ERSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEM 389
+ ++VD+ ++G++ A +V + M
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 132 SCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVS 191
+C + G LHA + + D + LV Y+ + A+ + + + +
Sbjct: 92 TCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP 151
Query: 192 WSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWC 251
W+ +I Y++ +E++ ++K+++ + + ++FT SV++ C A G+ +HG
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMM-SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 252 FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTF 311
+S + +V ++LIS+Y + G V+ A + F+ + R+ WNA++ F
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
+L ++M + GV+ + +T+ + C AG
Sbjct: 271 KLLDRMY-LSGVEASIVTWNTIAGGCLEAG 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 93/195 (47%), Gaps = 14/195 (7%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIK-TGLETIPLLSHHLINFYSKTQLPNSSLQV 79
N+ T+ + L +L+ G + H +I++ + +L + L++ Y+K+ ++ +V
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV 481
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F+S R T++SLI + + +AL +F+ M R G+ PD + +C+ + +
Sbjct: 482 FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLV 541
Query: 140 HVGLSLHALALKTAYHLDVFVA----SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSG- 194
G H L K + + + S +VD+Y + G + AR++F +P+ +
Sbjct: 542 REG---HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 195 -----MIYGYVQLGE 204
+I+G +GE
Sbjct: 599 LLKACLIHGNTNIGE 613
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 170/336 (50%), Gaps = 6/336 (1%)
Query: 131 KSCAALSSIHVGLSLHALALKT-AYHLDV-FVASSLVDMYAKCGEIGYARNVFDEMPHRN 188
K+C+ + ++ G H L +++ ++ D+ V +SL+ MY++C ++ +A VF ++ +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 189 VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIH 248
+ +W+ +I G+ EE L K++L+ N TL+S+L + L+ GK+ H
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 249 GWCFKTSFDSSCFVA-SSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHT 307
+ + C + +SL+ +Y+K G + A + F+ ++ R+ + +++ +
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
F+ M G+KP+ +T + VL ACSH+ LV +G F M+ +GI +HY+
Sbjct: 507 EVALAWFKDMDR-SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYS 565
Query: 368 TMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADR-VFEQGH 426
MVDL RAG L A + +P EP+ ++ LL C IHG+T + + AD+ + E
Sbjct: 566 CMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKP 625
Query: 427 VSSGLNVLLSNXXXXXXXXXXXXXXXKMLRDQGIKK 462
G +LL++ +L D G++K
Sbjct: 626 EHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 179/385 (46%), Gaps = 37/385 (9%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSLISSFAQ 100
G QLHAH I +GLE +L L+ FYS L + + + +S W+ LI S+ +
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 101 NDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFV 160
N ++ +++M+ G+ D+ P+ K+CAAL G +H +++ +++V
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 161 ASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEE- 219
++L+ MY + G++ AR +FD M R+ VSW+ +I Y + EA +L ++ +
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 220 ---------------------------------DVGVNDFTLSSVLRVCGASTLLELGKQ 246
+V + + + L+ C L+ GK
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 247 IHGWCFKT-SFDSSC-FVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQH 304
H ++ SF V +SLI++YS+C + A+ F++++ +L WN+++ A +
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 305 AHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQ 364
+ T L ++M + G PN IT +L + G ++ G+ + + + +
Sbjct: 402 ERSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 365 HYATMVDLLGRAGKLQDAVQVIEEM 389
+ ++VD+ ++G++ A +V + M
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 132 SCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVS 191
+C + G LHA + + D + LV Y+ + A+ + + + +
Sbjct: 92 TCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP 151
Query: 192 WSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWC 251
W+ +I Y++ +E++ ++K+++ + + ++FT SV++ C A G+ +HG
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMM-SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 252 FKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTF 311
+S + +V ++LIS+Y + G V+ A + F+ + R+ WNA++ F
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAG 341
+L ++M + GV+ + +T+ + C AG
Sbjct: 271 KLLDRMY-LSGVEASIVTWNTIAGGCLEAG 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 93/195 (47%), Gaps = 14/195 (7%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIK-TGLETIPLLSHHLINFYSKTQLPNSSLQV 79
N+ T+ + L +L+ G + H +I++ + +L + L++ Y+K+ ++ +V
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV 481
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F+S R T++SLI + + +AL +F+ M R G+ PD + +C+ + +
Sbjct: 482 FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLV 541
Query: 140 HVGLSLHALALKTAYHLDVFVA----SSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSG- 194
G H L K + + + S +VD+Y + G + AR++F +P+ +
Sbjct: 542 REG---HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 195 -----MIYGYVQLGE 204
+I+G +GE
Sbjct: 599 LLKACLIHGNTNIGE 613
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 5/117 (4%)
Query: 482 DRSHAKTVEIYNKLEELGDEMAKAGYVADTSFVLKEVGGEEKNQTIRYHSERLAIAFGLI 541
DRS A Y KL+ LG E+ AGYV +T +VL ++ E K + + +HSERLAIAFG+I
Sbjct: 128 DRSKA-----YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGII 182
Query: 542 TFPQERPIRVMKNLRVCGDCHTAIKFISKITGRVLIVRDNNRFHRFEDGKCTCGDYW 598
P IRVMKNLR+CGDCH IK +S I R +IVRDN RFH F DG C+CGDYW
Sbjct: 183 NTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 6/300 (2%)
Query: 109 DFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMY 168
D R M + L ++ I AK A + L +K++ + + L+ M+
Sbjct: 74 DILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMH 133
Query: 169 AKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG---VND 225
CG + R +FD MPHR+ SW+ + G +++G+ E+A LF +L G +
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS 193
Query: 226 FTLSSVLRVCGASTLLELGKQIHGWCFKTSF--DSSCFVASSLISLYSKCGAVEGAYQAF 283
+ L VL+ C ELGKQ+H C K F + +++ SLI Y + +E A
Sbjct: 194 WILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVL 253
Query: 284 EELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
+L N W A + + F +M + G+K N F VL ACS
Sbjct: 254 HQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGN-HGIKKNVSVFSNVLKACSWVSDG 312
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLT 403
+ G E ++++ G+ GK++DA +V + E + S W A++
Sbjct: 313 GRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVA 372
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 11/292 (3%)
Query: 39 RRGLQLHAHIIKTGLE-TIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSATTWSSL--- 94
R +L HI+K+ + TI ++ L+ S +L + + Q+F+ PHR +W+ +
Sbjct: 105 RGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRL-DITRQMFDRMPHRDFHSWAIVFLG 163
Query: 95 -ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
I D L + + + IL K+CA + +G +HAL K
Sbjct: 164 CIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLG 223
Query: 154 Y--HLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVSWSGMIYGYVQLGEDEEALRL 211
+ D +++ SL+ Y + + A V ++ + N V+W+ + + GE +E +R
Sbjct: 224 FIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRD 283
Query: 212 FKQVLVEEDVGVNDFTLSSVLRVCG-ASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
F + + + N S+VL+ C S G+Q+H K F+S C + LI +Y
Sbjct: 284 FIE-MGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMY 342
Query: 271 SKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
K G V+ A + F+ + ++ WNAM+ + Q+ +L QMK+ G
Sbjct: 343 GKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATG 394
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 179/423 (42%), Gaps = 64/423 (15%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLS----HHLINFYSKTQLPN-- 74
NYR I + L HS L L H++ E+ PL S L+N +K + +
Sbjct: 39 NYREILRNGL---HSLQFNEALDLFTHMV----ESRPLPSIIDFTKLLNVIAKMKKFDVV 91
Query: 75 ----SSLQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAA 130
LQ+ S T + L++ F Q+ P+LA F +M+++G PD +
Sbjct: 92 INLCDHLQIMGVS--HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLI 149
Query: 131 KSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPH---- 186
+ + +S+ ++ DV + ++++D K G + YA ++FD+M +
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR 209
Query: 187 RNVVSWSGMIYGYVQLG--EDEEAL------RLFKQVLVEEDVGVNDFT----------- 227
+VV ++ ++ G G D ++L R K ++ + ++ F
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Query: 228 LSSVLRVCGASTLLELGKQIHGWCFKTSFDSS-----------CF----VASSLISLYSK 272
+ ++R+ A + I+G+C + D + CF +SLI+ + K
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Query: 273 CGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
C V+ A + F E+ + L + ++ Q N E+F M S GV PN
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS-RGVPPNIR 388
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDY--GIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
T+ +L+ + G V+K FE M+K G+ P Y ++ L GKL+ A+ V
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 387 EEM 389
E+M
Sbjct: 449 EDM 451
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 167/382 (43%), Gaps = 22/382 (5%)
Query: 39 RRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHRSAT----TWSSL 94
++GL + + + G + LIN Y+K + +L+V T+S +
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 95 ISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAY 154
I+ F + A F M++ G+ PD + + + ++ + K +
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 155 HLDVFVASSLVDMYAKCGEIGYARNVFDEMPH----RNVVSWSGMIYGYVQLGEDEEALR 210
++ YAK G++ + VFD M V +++G+I G V+ + E+A+
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 211 LFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF--KTSFDSSCFVASSLIS 268
+ ++ + V N+ T + +++ G +++ + GK + D F +L+
Sbjct: 646 ILDEMTLA-GVSANEHTYTKIMQ--GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 269 LYSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFELFEQMKSVGGVK 324
K G ++ A +E+ RN+ ++N ++ A+ +L +QMK GVK
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK-EGVK 761
Query: 325 PNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQ 384
P+ T+ + ACS AG + + E M+ G++P + Y T++ RA + A+
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 385 VIEEMP---MEPTESVWGALLT 403
EEM ++P ++V+ LLT
Sbjct: 821 CYEEMKAMGIKPDKAVYHCLLT 842
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 162/387 (41%), Gaps = 18/387 (4%)
Query: 41 GLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSL----QVFNSSPHRSATTWSSLIS 96
L + ++K G E + L+N Y + + ++ Q+F + T+++LI
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
++ A+ +M+ G PD T I + LSL K
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLF 212
DV + ++++D + A N+F EM ++ NVV+++ +I G +A RL
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 213 KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSK 272
++E + N T S+++ L ++++ K S D F SSLI+ +
Sbjct: 314 SD-MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 273 CGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFI 328
++ A FE + + N+ +N ++ + ELF +M S G+ N +
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTV 431
Query: 329 TFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
T+ ++ AG + Q F+ M D G+ P Y+ ++D L + GKL+ A+ V E
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 389 M---PMEPTESVWGALLTGCRIHGDTE 412
+ MEP + ++ G G E
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 11/253 (4%)
Query: 145 LHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYV 200
L+ +K + D+F SSL++ + + A+++F+ M + NVV+++ +I G+
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+ EE + LF+++ VG N T +++++ + ++ ++I
Sbjct: 407 KAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQ 316
S L+ K G +E A FE LQ ++ +N M+ + ++LF
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
+ S+ GVKPN I + ++ GL E+ F MK+D G P S Y T++ R
Sbjct: 526 L-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIRARLRD 583
Query: 377 GKLQDAVQVIEEM 389
G + ++I+EM
Sbjct: 584 GDKAASAELIKEM 596
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 150/358 (41%), Gaps = 53/358 (14%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
++ S P S ++ L+S+ A+ + L + +M + + D + S
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 138 SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEM----PHRNVVSWS 193
+ + L++ +K Y D+ SSL++ Y I A + D+M N V+++
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 194 GMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFK 253
+I+G + EA+ L ++ V R C L G ++G C +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRM---------------VARGCQPD-LFTYGTVVNGLCKR 233
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFEL 313
D +A SL+ K G +E ++ ++ ++ A + + N L
Sbjct: 234 GDID----LALSLLKKMEK-GKIEA-----------DVVIYTTIIDALCNYKNVNDALNL 277
Query: 314 FEQMKSVGGVKPNFITFLCVLYA-CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDL 372
F +M + G++PN +T+ ++ C++ + + +++++ I P ++ ++D
Sbjct: 278 FTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDA 334
Query: 373 LGRAGKLQDAVQVIEEM---PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
+ GKL +A ++ +EM ++P + +L+ G +H DR+ E H+
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH----------DRLDEAKHM 382
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 164/385 (42%), Gaps = 72/385 (18%)
Query: 51 TGLETIPLLSHHLINFYSKTQ---LPNSSLQVFNSSPHRSAT-----------------T 90
T ET PL+ ++L+ ++ L N +++VF S + T
Sbjct: 153 TNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNAT 212
Query: 91 WSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALAL 150
++++IS QN +P A+++F +M G PD+ + + ++ + LSL+ A
Sbjct: 213 FTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRAR 272
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP----HRNVVSWSGMIYGYVQLGEDE 206
+ +D S+L+ +Y G N+++EM N+V ++ +I +G
Sbjct: 273 TEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDS---MGR-- 327
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSL 266
A R ++ ++ +D+ N FT W S + A L
Sbjct: 328 -AKRPWQAKIIYKDLITNGFT--------------------PNW--------STYAA--L 356
Query: 267 ISLYSKCGAVEGAYQAFEELQVRNLGM----WNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+ Y + + A + E++ + L + +N +L CA + + + FE+F+ MK+
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCET 416
Query: 323 VKPNFITF--LCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
P+ TF L +YACS G V + + L ++ G EP +++ G+A ++
Sbjct: 417 CDPDSWTFSSLITVYACS--GRVSEAEAAL-LQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Query: 381 DAVQVIE---EMPMEPTESVWGALL 402
D V+ + E+ + P + G LL
Sbjct: 474 DVVRTFDQVLELGITPDDRFCGCLL 498
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 159/370 (42%), Gaps = 14/370 (3%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQ---VFNSSPHRS 87
AL + + L H +++ G + + ++ S Q+ +S V + P +
Sbjct: 226 ALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPN 285
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
T+ +LI+ F + A D F+ M + G+ PD T + +G L +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLG 203
AL LDV V SS +D+Y K G++ A V+ M + NVV+++ +I G Q G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
EA ++ Q+L + + + T SS++ L G ++ K + +
Sbjct: 406 RIYEAFGMYGQIL-KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 264 SSLISLYSKCG----AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
L+ SK G A+ + + + N+ ++N+++ + + ++F M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM-G 523
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
+ G+KP+ TF V+ G +E+ F M K G+EP + Y T++D + K
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCKHMKP 582
Query: 380 QDAVQVIEEM 389
+Q+ + M
Sbjct: 583 TIGLQLFDLM 592
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 154/369 (41%), Gaps = 23/369 (6%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLP----NSSLQVFNSSPHRSATTWS 92
+LR G L+ +IK G ++ L++ SK L S+++ S + ++
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKT 152
SLI + + + AL FR M G+ PD T + + L L K
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 153 AYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVVS-----WSGMIYGYVQLGEDEE 207
D +L+D + K + +FD M RN +S + +I+ + E+
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTL--LELGKQIHGWCFKTSFDSSCFVASS 265
A + F L+E + + T +++ +CG +L L+ ++I T F + +
Sbjct: 620 ASKFFNN-LIEGKMEPDIVTYNTM--ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 266 LISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIAC-----AQHAHTNRTFELFEQMKSV 320
LI + K ++GA + F + + NA+ C ++ +F+LFE+M+
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE- 734
Query: 321 GGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
G+ P+ +++ ++ G V++ + F D + P YA ++ + G+L
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFH-QAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 381 DAVQVIEEM 389
+A + E M
Sbjct: 794 EAALLYEHM 802
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 145/343 (42%), Gaps = 51/343 (14%)
Query: 63 LINFYSKTQLPNSSLQVFNSSP----HRSATTWSSLISSFAQNDLPHLAL-DFFRQMLRI 117
LI+ Y ++ L ++ VFNS + T++++I + + + + FF +M R
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 118 GLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYA 177
G+ PD + C+ +L DVF ++L+D K G++ A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 178 RNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLR 233
+ +MP + NVVS+S +I G+ + G +EAL LF + +R
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE-----------------MR 436
Query: 234 VCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV----R 289
G + D + ++L+S+Y+K G E A E+ +
Sbjct: 437 YLG-----------------IALDRVSY--NTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHY 349
++ +NA+L + + ++F +MK V PN +T+ ++ S GL ++
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKR-EHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 350 FELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
F K G+ Y+ ++D L + G + AV +I+EM E
Sbjct: 537 FREF-KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 229 SSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ- 287
S+++ G + + K+I F + ++ + S+LIS Y + G E A F ++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 288 ---VRNLGMWNAMLIACAQHA-HTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
NL +NA++ AC + + + F++M+ GV+P+ ITF +L CS GL
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGGLW 355
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
E ++ F+ M + IE Y T++D + + G++ A +++ +MP++
Sbjct: 356 EAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 56/343 (16%)
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDD----HILPTAAKSCAALSSIHVGLSL 145
T+S++I+ + +L + A+++F +M + GL+PD+ IL +KS + LSL
Sbjct: 223 TYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKS----GKVEEVLSL 278
Query: 146 HALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP----HRNVVSWSGMIYGYVQ 201
+ A+ T + D S L M+ + G+ R V EM NVV ++ ++ +
Sbjct: 279 YERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR 338
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
G+ A LF ++L E + N+ TL
Sbjct: 339 AGKPGLARSLFNEML-EAGLTPNEKTL--------------------------------- 364
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLGM----WNAMLIACAQHAHTNRTFELFEQM 317
++L+ +Y K A Q +EE++ + M +N +L CA LF M
Sbjct: 365 --TALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM 422
Query: 318 KSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAG 377
K +P+ ++ +L G EK FE M K G++ +V LG+A
Sbjct: 423 KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK-AGVQVNVMGCTCLVQCLGKAK 481
Query: 378 KLQDAVQVIE---EMPMEPTESVWGALLTGCRIHGDTELASYV 417
++ D V V + + ++P + + G LL+ + +E A V
Sbjct: 482 RIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKV 524
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 14/321 (4%)
Query: 77 LQVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAAL 136
++ F P SA +++LI +F+ + + L F+QM +G P H+ T + A
Sbjct: 159 MRKFKFRPAFSA--YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 137 SSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNV----VSW 192
+ LSL ++ D+ + + +D + K G++ A F E+ + V++
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 193 SGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF 252
+ MI + +EA+ +F+ + V + ++ A E +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 253 KTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ---VRNLGMWNAMLIACAQHAHTNR 309
K S S + +++ K G V+ A + FEE++ NL +N ++ + +
Sbjct: 337 KGSI-PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGI-EPGSQHYAT 368
FEL + M+ G+ PN T ++ + +++ FE M DY + P + +
Sbjct: 396 AFELRDSMQK-AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM--DYKVCTPDEITFCS 452
Query: 369 MVDLLGRAGKLQDAVQVIEEM 389
++D LG+ G++ DA +V E+M
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKM 473
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 49/260 (18%)
Query: 156 LDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRL 211
LD + ++D + KCG++ A + +EM + VV++ +I G ++ +EA L
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 212 FKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYS 271
F++ S +EL I+ SSLI +
Sbjct: 645 FEE---------------------AKSKRIELNVVIY---------------SSLIDGFG 668
Query: 272 KCGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF 327
K G ++ AY EEL + NL WN++L A + N F+ MK + PN
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL-KCTPNQ 727
Query: 328 ITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE 387
+T+ ++ K +++ M+K G++P + Y TM+ L +AG + +A + +
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 388 EMPME---PTESVWGALLTG 404
P + + A++ G
Sbjct: 787 RFKANGGVPDSACYNAMIEG 806
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 183/422 (43%), Gaps = 22/422 (5%)
Query: 27 NHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKT-QLPNSSL---QVFNS 82
N + + + SL + +++ ++ GL + LI Y K Q N+ ++ +
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
+ + +++S+I + + AL F +ML + P +L T
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYG 198
L L L + +D +++L+ + G++ A + E+ R + VS++ +I G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGW--CFKTSF 256
+ +EA +F +V+ + +++T S + +CG + ++ + I W C +
Sbjct: 550 CCGKKKLDEAF-MFLDEMVKRGLKPDNYTYS--ILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFE 312
+ S +I K E + F+E+ +N+ ++N ++ A + + E
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 313 LFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDL 372
L E MK G+ PN T+ ++ S VE+ + FE M+ + G+EP HY ++D
Sbjct: 667 LREDMKH-KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDG 724
Query: 373 LGRAGKLQDAVQVIEEM---PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSS 429
G+ G++ ++ EM + P + + ++ G G+ AS + + + E+G V
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 430 GL 431
+
Sbjct: 785 SI 786
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 183/422 (43%), Gaps = 22/422 (5%)
Query: 27 NHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKT-QLPNSSL---QVFNS 82
N + + + SL + +++ ++ GL + LI Y K Q N+ ++ +
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
+ + +++S+I + + AL F +ML + P +L T
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYG 198
L L L + +D +++L+ + G++ A + E+ R + VS++ +I G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGW--CFKTSF 256
+ +EA +F +V+ + +++T S + +CG + ++ + I W C +
Sbjct: 550 CCGKKKLDEAF-MFLDEMVKRGLKPDNYTYS--ILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFE 312
+ S +I K E + F+E+ +N+ ++N ++ A + + E
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 313 LFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDL 372
L E MK G+ PN T+ ++ S VE+ + FE M+ + G+EP HY ++D
Sbjct: 667 LREDMKH-KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDG 724
Query: 373 LGRAGKLQDAVQVIEEM---PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSS 429
G+ G++ ++ EM + P + + ++ G G+ AS + + + E+G V
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 430 GL 431
+
Sbjct: 785 SI 786
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 174/415 (41%), Gaps = 31/415 (7%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQ---VFNSSPHRS 87
AL + + L H +++ G + + ++ S Q+ +S V + P +
Sbjct: 226 ALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPN 285
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
T+ +LI+ F + A D F+ M + G+ PD T + +G L +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLG 203
AL LDV V SS +D+Y K G++ A V+ M + NVV+++ +I G Q G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
EA ++ Q+L + + + T SS++ L G ++ K + +
Sbjct: 406 RIYEAFGMYGQIL-KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 264 SSLISLYSKCG----AVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
L+ SK G A+ + + + N+ ++N+++ + + ++F M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM-G 523
Query: 320 VGGVKPNFITFLCVLYA-------CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDL 372
+ G+KP+ TF V+ C H G F+LM+++ I ++ L
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLFDLMQRN-KISADIAVCNVVIHL 581
Query: 373 LGRAGKLQDAVQVIE---EMPMEPTESVWGALLTG-CRIHGDTELASYVADRVFE 423
L + +++DA + E MEP + ++ G C + E A+R+FE
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE-----AERIFE 631
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 151/360 (41%), Gaps = 33/360 (9%)
Query: 37 SLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLP----NSSLQVFNSSPHRSATTWS 92
+LR G L+ +IK G ++ L++ SK L S+++ S + ++
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 93 SLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKS-------CAALSSIHVGLSL 145
SLI + + + AL FR M G+ PD T + C + +GL L
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT-IGLQL 559
Query: 146 HALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEM----PHRNVVSWSGMIYGYVQ 201
L + D+ V + ++ + KC I A F+ + ++V+++ MI GY
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCF 261
L +EA R+F ++L G N TL+ ++ V + ++ ++ + +
Sbjct: 620 LRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 262 VASSLISLYSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFELFEQM 317
L+ +SK +EG+++ FEE+Q + + ++ ++ + + +F Q
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 318 KSVGGVKPNFITFLCVLYA-CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
+ P+ + + ++ C LVE Y +++ G++P DLL RA
Sbjct: 739 ID-AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN--GVKPD--------DLLQRA 787
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 146/348 (41%), Gaps = 14/348 (4%)
Query: 89 TTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHAL 148
T+ ++I+ + P LAL+ +M + + D I T S + L+L
Sbjct: 206 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 149 ALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGE 204
DVF SSL+ G A + +M R NVV+++ +I + + G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 205 DEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVAS 264
EA +LF + +++ + N T +S++ L+ +QI +
Sbjct: 326 LIEAEKLFDE-MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 265 SLISLYSKCGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSV 320
+LI+ + K V + F ++ R N + ++ Q + + +F+QM S
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS- 443
Query: 321 GGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQ 380
GV PN +T+ +L G +EK FE ++K +EP Y M + + +AGK++
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGMCKAGKVE 502
Query: 381 DAVQVIEEMPM---EPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
D + + + +P + +++G G E A + ++ E G
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 170/421 (40%), Gaps = 64/421 (15%)
Query: 63 LINFYSKTQLPNSSLQVFNSSP----HRSATTWSSLISSFAQNDLPHLALDFFRQMLRIG 118
+IN K P+ +L + N +S++I S + AL+ F +M G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 119 LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYAR 178
+ PD + L + L+ + +V +SL+D +AK G++ A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 179 NVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLR- 233
+FDEM R N+V+++ +I G+ +EA ++F ++V +D + T ++++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDVVTYNTLING 389
Query: 234 VCGASTL---LELGKQ----------------IHGWCFKTSFDSSCFVASSLIS------ 268
C A + +EL + IHG+ + D++ V ++S
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 269 --LYS-------KCGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFE 315
Y+ K G +E A FE LQ ++ +N M + ++LF
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 316 QMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGR 375
+ S+ GVKP+ I + ++ GL E+ F MK+D G P S Y T++ R
Sbjct: 510 SL-SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED-GPLPDSGTYNTLIRAHLR 567
Query: 376 AGKLQDAVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGLNVLL 435
G + ++I+EM CR GD V D + G + G +L
Sbjct: 568 DGDKAASAELIKEM-------------RSCRFAGDASTYGLVTD-MLHDGRLDKGFLEVL 613
Query: 436 S 436
S
Sbjct: 614 S 614
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 147/372 (39%), Gaps = 49/372 (13%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPT----------AAKSCAAL 136
S T +SL++ F + A+ QM+ +G PD T A+++ A +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 137 SSIHV-------------------------GLSLHALALKTAYHLDVFVASSLVDMYAKC 171
+ V L+L K DV + S+++D K
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 172 GEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFT 227
+ A N+F EM ++ +V ++S +I G +A RL +L E + N T
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML-ERKINPNVVT 312
Query: 228 LSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ 287
+S++ L +++ + S D + +SLI+ + ++ A Q F +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 288 VR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLV 343
+ ++ +N ++ + ELF M S G+ N +T+ +++ A
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-SRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM---PMEPTESVWGA 400
+ Q F+ M D G+ P Y T++D L + GKL+ A+ V E + MEP +
Sbjct: 432 DNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 401 LLTGCRIHGDTE 412
+ G G E
Sbjct: 491 MSEGMCKAGKVE 502
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 157/346 (45%), Gaps = 12/346 (3%)
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
T+S+LI+SF + + AL + ++M + + D + + L +S+ +
Sbjct: 192 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRL 251
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGED 205
++ D+ +S++++Y K AR + EM N VS+S ++ YV+ +
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 206 EEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASS 265
EAL +F + + E + ++ T + ++ V G +++ ++ K + + ++
Sbjct: 312 LEALSVFAE-MKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 266 LISLYSKCGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
++ +Y + A F +Q + N+ +N M+ + + L ++M+S
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS-R 429
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
G++PN IT+ ++ AG +++ F+ ++ G+E Y TM+ R G +
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS-GVEIDQVLYQTMIVAYERVGLMGH 488
Query: 382 AVQVIEEMPMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHV 427
A +++ E+ + P +T G TE A++V + FE G V
Sbjct: 489 AKRLLHELKL-PDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 17/282 (6%)
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEM----PHRNVVSWSGMIYGYVQLGEDEEAL 209
Y LDV ++++ Y++ G+ A ++F+ M P +V+++ ++ + ++G +
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKI 265
Query: 210 RLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
+ + + ++FT S+VL C LL K+ ++ ++L+ +
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 270 YSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP 325
+ K G A +E++ + +N ++ A + + + E M + GV P
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM-TKKGVMP 384
Query: 326 NFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQV 385
N IT+ V+ A AG ++ F M K+ G P + Y ++ LLG+ + + +++
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 386 IEEMP---MEPTESVWGALLTGCRIHGDTELASYVADRVFEQ 424
+ +M P + W +L C G+ + +V +RVF +
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALC---GNKGMDKFV-NRVFRE 481
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 143/382 (37%), Gaps = 62/382 (16%)
Query: 53 LETIPLLSHHL--------INFYSKTQLPNSSLQVFNS----SPHRSATTWSSLISSFAQ 100
L+ IPL + L ++ YS+T ++ +F P + T++ ++ F +
Sbjct: 198 LDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGK 257
Query: 101 NDLP-HLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVF 159
L +M GL D+ T +CA + A Y
Sbjct: 258 MGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTV 317
Query: 160 VASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQV 215
++L+ ++ K G A +V EM + V+++ ++ YV+ G +EA + ++
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVI-EM 376
Query: 216 LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGA 275
+ ++ V N T ++V I Y K G
Sbjct: 377 MTKKGVMPNAITYTTV-----------------------------------IDAYGKAGK 401
Query: 276 VEGAYQAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFL 331
+ A + F ++ V N +NA+L + + +N ++ MKS G PN T+
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS-NGCSPNRATWN 460
Query: 332 CVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP- 390
+L C + G+ + F MK G EP + T++ GR G DA ++ EM
Sbjct: 461 TMLALCGNKGMDKFVNRVFREMK-SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 391 --MEPTESVWGALLTGCRIHGD 410
+ + ALL GD
Sbjct: 520 AGFNACVTTYNALLNALARKGD 541
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 179/439 (40%), Gaps = 55/439 (12%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSL----QVFNSSPHRSATTWSS 93
L L + ++K G E + L+N Y ++ + ++ Q+F + + T+++
Sbjct: 132 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 191
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
LI ++ A+ +M+ G PD + +L +
Sbjct: 192 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEAL 209
V + ++++D K + A N+F EM + NVV++S +I G +A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 210 RLFKQVLVEEDVGVNDFTLSSVL-------RVCGASTLL-ELGKQ------------IHG 249
RL ++E + + FT S+++ ++ A L E+ K+ I+G
Sbjct: 312 RLLSD-MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 250 WCFKTSFDSS-----------CF----VASSLISLYSKCGAVEGAYQAFEELQVR----N 290
+C D + CF ++LI + K VE + F E+ R N
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
+N ++ Q + E+F++M S GV PN +T+ +L G +EK F
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 351 ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPM---EPTESVWGALLTG-CR 406
E +++ +EP Y M++ + +AGK++D + + + +P + +++G CR
Sbjct: 490 EYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 407 IHGDTELASYVADRVFEQG 425
G E A + + E G
Sbjct: 549 -KGSKEEADALFKEMKEDG 566
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 139/321 (43%), Gaps = 16/321 (4%)
Query: 107 ALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVD 166
AL+ F++M G+ P+ + L + ++ + DVF S+L+D
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 167 MYAKCGEIGYARNVFDEMPHRNV----VSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVG 222
+ K G++ A ++DEM R++ V++S +I G+ +EA ++F + +V +
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF-EFMVSKHCF 393
Query: 223 VNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQA 282
+ T +++++ +E G ++ + + + LI + G + A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 283 FEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACS 338
F+E+ N+ +N +L ++ + +FE ++ ++P T+ ++
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKMEPTIYTYNIMIEGMC 512
Query: 339 HAGLVEKGQHYF-ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME---PT 394
AG VE G F L K G++P Y TM+ R G ++A + +EM + P
Sbjct: 513 KAGKVEDGWDLFCNLSLK--GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Query: 395 ESVWGALLTGCRIHGDTELAS 415
+ L+ GD E ++
Sbjct: 571 SGCYNTLIRARLRDGDREASA 591
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 154/340 (45%), Gaps = 45/340 (13%)
Query: 78 QVFNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSC-AAL 136
++ S P S +S L+S+ A+ + + + QM +G +P +H + +C
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG-IPHNHYTYSILINCFCRR 129
Query: 137 SSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEM----PHRNVVSW 192
S + + L++ +K Y ++ SSL++ Y I A + D+M N V++
Sbjct: 130 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189
Query: 193 SGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCF 252
+ +I+G + EA+ L ++ V + C L+ G ++G C
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRM---------------VAKGC-QPDLVTYGVVVNGLCK 233
Query: 253 KTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFE 312
+ D +A +L++ + G +E + ++N ++ ++ H +
Sbjct: 234 RGDTD----LAFNLLNKMEQ-GKLEPG-----------VLIYNTIIDGLCKYKHMDDALN 277
Query: 313 LFEQMKSVGGVKPNFITFLCVLYA-CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVD 371
LF++M++ G++PN +T+ ++ C++ + + +++++ I P ++ ++D
Sbjct: 278 LFKEMET-KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK--INPDVFTFSALID 334
Query: 372 LLGRAGKLQDAVQVIEEM---PMEPTESVWGALLTGCRIH 408
+ GKL +A ++ +EM ++P+ + +L+ G +H
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 147/349 (42%), Gaps = 15/349 (4%)
Query: 53 LETIPLLSHHLINFYSKTQLPNSSLQVFNSSPHR----SATTWSSLISSFAQNDLPHLAL 108
LE L+ + +I+ K + + +L +F + + T+SSLIS A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 109 DFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMY 168
M+ + PD + + L+ +K + + SSL++ +
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 169 AKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVN 224
+ A+ +F+ M + +VV+++ +I G+ + EE + +F+++ VG N
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-N 430
Query: 225 DFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFE 284
T + +++ + ++ ++I + ++L+ K G +E A FE
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 285 ELQVRNLG----MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHA 340
LQ + +N M+ + ++LF + S+ GVKP+ + + ++
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRK 549
Query: 341 GLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
G E+ F+ MK+D G P S Y T++ R G + + ++I+EM
Sbjct: 550 GSKEEADALFKEMKED-GTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 146/355 (41%), Gaps = 46/355 (12%)
Query: 63 LINFYSKTQLPNSSLQVFNS----SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIG 118
+IN K P+ +L + N ++++I + A D F +M G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 119 LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYAR 178
+ PD L + L+ + D+ ++L+D + K G++ A
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 179 NVFDEMPHR-----NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLR 233
++DEM +VV+++ +I G+ + EE + +F+++ VG N T +++
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYTTL-- 397
Query: 234 VCGASTLLELGKQIHGWCFKTSFDSSCFVASSLIS-------------LYSKC--GAVEG 278
IHG+ D++ V ++S L C G VE
Sbjct: 398 -------------IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 279 AYQAFEELQVRNLGM----WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
A FE +Q R++ + + M+ A + ++LF + S+ GVKPN +T+ ++
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMM 503
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
GL E+ F MK+D G P S Y T++ R G + ++I+EM
Sbjct: 504 SGFCRKGLKEEADALFVEMKED-GPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/346 (18%), Positives = 149/346 (43%), Gaps = 40/346 (11%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+ ++S+L+ +F + + A+ F+ M R+GL+P+++ + + + ++ L
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQL 202
L+ +V ++L+D + A +F +M N+ S++ +I+G+V+
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 203 GEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFV 262
+ AL L ++ + G+ LL G I G C +++ V
Sbjct: 486 KNMDRALELLNEL---KGRGIK-------------PDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 263 ASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
+ + +CG ++ +L ++ ++ A + + L ++MK +
Sbjct: 530 MNEM----KECG-----------IKANSL-IYTTLMDAYFKSGNPTEGLHLLDEMKEL-D 572
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
++ +TF ++ LV K YF + D+G++ + + M+D L + +++ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 383 VQVIEEMPME---PTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
+ E+M + P + + +L+ G G+ A + D++ E G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 140/310 (45%), Gaps = 39/310 (12%)
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLF- 212
VF + ++D K G++ AR +F+EM R + V+++ MI G+ ++G ++ + F
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 213 --KQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLY 270
K + E DV + ++ + LE +++ G K + S S+L+ +
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY----STLVDAF 377
Query: 271 SKCGAVEGAYQAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPN 326
K G ++ A + + +++ V N + +++ A + + + F L +M V GV+ N
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-GVEWN 436
Query: 327 FITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVI 386
+T+ ++ A +++ + F M G+ P Y ++ +A + A++++
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDT-AGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 387 EEMP---MEPTESVWGALLTG-------------------CRIHGDTELASYVADRVFEQ 424
E+ ++P ++G + G C I ++ + + + D F+
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 425 GHVSSGLNVL 434
G+ + GL++L
Sbjct: 556 GNPTEGLHLL 565
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 182/414 (43%), Gaps = 53/414 (12%)
Query: 41 GLQLHA-----HIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF----------NSSPH 85
GL++HA + K G++ + + ++ Y K + + + F +S
Sbjct: 236 GLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVC 295
Query: 86 RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDD-------HILPTAAKSCAALSS 138
S+ T++++I ++ ++ A + F++ML G++P HI + ++S
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQ-LGEVTS 354
Query: 139 IHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNV----VSWSG 194
+ + LH Y++ L+ ++ K +I A F EM + VS+
Sbjct: 355 LMKTMKLHCAPDTRTYNI-------LISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 195 MIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKT 254
++Y + EEA L + + +++V ++++T S++ R+ + +LE W +
Sbjct: 408 LLYAFSIRHMVEEAEGLIAE-MDDDNVEIDEYTQSALTRMYVEAEMLE-----KSWSWFK 461
Query: 255 SF----DSSCFVASSLISLYSKCGAVEGAYQAF---EELQVRNLGMWNAMLIACAQHAHT 307
F + S S+ I Y + G + A + F +E+ R + +N M+ A
Sbjct: 462 RFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSC 521
Query: 308 NRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYA 367
+ ELFE M S GV P+ T+ ++ + A + KG+ Y E M ++ G Y
Sbjct: 522 EKACELFESMMSY-GVTPDKCTYNTLVQILASADMPHKGRCYLEKM-RETGYVSDCIPYC 579
Query: 368 TMVDLLGRAGKLQDAVQVIEEM---PMEPTESVWGALLTGCRIHGDTELA-SYV 417
++ + G+L A +V +EM +EP V+G L+ G+ + A SYV
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYV 633
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 137/315 (43%), Gaps = 15/315 (4%)
Query: 86 RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSL 145
R+ ++ +I ++ + A + F M+ G+ PD T + A+ H G
Sbjct: 503 RTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY 562
Query: 146 HALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRN----VVSWSGMIYGYVQ 201
+T Y D +++ + K G++ A V+ EM N VV + +I +
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 202 LGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIH----GWCFKTSFD 257
G ++A+ + + + E + N +S++++ L+ + I+ C KT +
Sbjct: 623 TGNVQQAMS-YVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY- 680
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVR---NLGMWNAMLIACAQHAHTNRTFELF 314
+ ++ +I+LYS+ V A F+ ++ R N + ML ++ ++
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIA 740
Query: 315 EQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLG 374
+QM+ + + + +++ VL + G ++ F+ M GI+P + ++ +L
Sbjct: 741 KQMREM-KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSS-GIQPDDSTFKSLGTILM 798
Query: 375 RAGKLQDAVQVIEEM 389
+ G + AV+ IEE+
Sbjct: 799 KLGMSKKAVRKIEEI 813
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 145/360 (40%), Gaps = 50/360 (13%)
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLP---------------------------- 121
+++SLIS+FA + A++ F++M G P
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 122 --DDHILPTAAK-----SCAALSSIHVGLSLHALALKTA-YHLDVFVASSLVDMYAKCGE 173
D I P A +C S+H + +K A + D ++L+D+Y K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 174 IGYARNVFDEMP----HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLS 229
A V +EM ++V+++ +I Y + G +EA+ L K + E+ + FT +
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL-KNQMAEKGTKPDVFTYT 388
Query: 230 SVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVR 289
++L + +E I + ++ I +Y G + F+E+ V
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 290 NLG----MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEK 345
L WN +L Q+ + +F++MK G V P TF ++ A S G E+
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQ 507
Query: 346 GQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP---MEPTESVWGALL 402
+ M D G+ P Y T++ L R G + + +V+ EM +P E + +LL
Sbjct: 508 AMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 129/312 (41%), Gaps = 13/312 (4%)
Query: 102 DLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVA 161
DL A D+F + + D+ ++ + ++ + + LDV+
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 211
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPH----RNVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
+SL+ +A G A NVF +M +++++ ++ + ++G + + +
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
+ + + +T ++++ C +L + Q+ F ++L+ +Y K +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 278 GAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCV 333
A + E+ + +N+++ A A+ + EL QM + G KP+ T+ +
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTL 390
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP--- 390
L AG VE FE M ++ G +P + + + G GK + +++ +E+
Sbjct: 391 LSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 391 MEPTESVWGALL 402
+ P W LL
Sbjct: 450 LSPDIVTWNTLL 461
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 164/415 (39%), Gaps = 98/415 (23%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS------SPHRSATTWSSLIS 96
Q+ + G + + L++ Y K+ P +++V N SP S T++SLIS
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP--SIVTYNSLIS 357
Query: 97 SFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHL 156
++A++ + A++ QM G P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKP----------------------------------- 382
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEMPH----RNVVSWSGMIYGYVQLGEDEEALRLF 212
DVF ++L+ + + G++ A ++F+EM + N+ +++ I Y G+ E +++F
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 213 KQVLV---EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISL 269
++ V D+ T +++L V G + + + + F ++LIS
Sbjct: 443 DEINVCGLSPDI----VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 270 YSKCGAVEGAYQAFEEL----QVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKP 325
YS+CG+ E A + + +L +N +L A A+ ++ ++ +M+ G KP
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED-GRCKP 557
Query: 326 NFITFLCVLYA-----------------------------------CSHAGLVEKGQHYF 350
N +T+ +L+A CS L+ + + F
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 351 ELMKKDYGIEPGSQHYATMVDLLGR---AGKLQDAVQVIEEMPMEPTESVWGALL 402
+ K+ G P +MV + GR K + ++E P+ + + +L+
Sbjct: 618 SEL-KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 136/308 (44%), Gaps = 11/308 (3%)
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
T++ +I+ F LAL +ML++G PD + + + + +SL
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGED 205
++ Y D+ ++++D K + A + F E+ + NVV+++ ++ G
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 206 EEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASS 265
+A RL ++++ + N T S++L + + K++ + S D SS
Sbjct: 242 SDAARLLSD-MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 266 LISLYSKCGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
LI+ ++ A Q F+ + + ++ +N ++ + +LF +M S
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQR 359
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
G+ N +T+ ++ AG V+K Q +F M +GI P Y ++ L G+L+
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEK 418
Query: 382 AVQVIEEM 389
A+ + E+M
Sbjct: 419 ALVIFEDM 426
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 152/355 (42%), Gaps = 59/355 (16%)
Query: 58 LLSHH-------LINFYSKTQLPNSSLQVFNS--------SPHRSATTWSSLISSFAQND 102
LLSHH L+ Y +T ++SL + NS SP S + +S++
Sbjct: 88 LLSHHKFADAKSLLVSYIRTS--DASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEG 145
Query: 103 LPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVAS 162
PH+AL F++M+R+ L P+ +++ +GL
Sbjct: 146 KPHVALQIFQKMIRLKLKPN----------LLTCNTLLIGLV------------------ 177
Query: 163 SLVDMYAKCGEIGYARNVFDEMPH----RNVVSWSGMIYGYVQLGEDEEALRLFKQVLVE 218
Y I AR VFD+M NV +++ ++ GY G+ E+AL + ++++ E
Sbjct: 178 ----RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 219 EDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEG 278
V ++ T +++L+ L K++ K + ++L+ Y K G+++
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 279 AYQAFEELQVRN----LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVL 334
A+Q E ++ N L +N ++ EL + MKS+ ++P+ +T+ ++
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL-KLQPDVVTYNTLI 352
Query: 335 YACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
C GL + + E M+ D G++ + + L + K + + ++E+
Sbjct: 353 DGCFELGLSLEARKLMEQMEND-GVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 163/390 (41%), Gaps = 22/390 (5%)
Query: 50 KTGLETIPLLSHHLINFYSKTQLPNSSLQVF----NSSPHRSATTWSSLISSFAQNDLPH 105
+ G+E + L+N +S+ +VF + T++++I + +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 106 LALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLV 165
A++ R M G D T ++C A S ++L+ + + S ++
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 166 DMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDV 221
K G++ VF+ M + NV ++ +I GY + G E+A+RL + +++E
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR-MIDEGF 393
Query: 222 GVNDFTLSSVLR-VCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAY 280
+ T S V+ +C + E H F +S F SSLI K G V+ A
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY-SSLIDGLGKAGRVDEAE 452
Query: 281 QAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA 336
+ FEE+ R+ +NA++ A +H + LF++M+ G T+ +L
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 337 CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM-PM---- 391
E+ +++M D GI P + + + L +GK+ A ++++E+ PM
Sbjct: 513 MFKEHRNEEALKLWDMM-IDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 392 -EPTESVWGALLTGCRIHGDTELASYVADR 420
E + L RI +LA + +R
Sbjct: 572 DAACEDMINTLCKAGRIKEACKLADGITER 601
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 131/270 (48%), Gaps = 15/270 (5%)
Query: 158 VFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLG--EDEEALRL 211
V V ++++ +Y++ G+ A+ + D M R +++S++ +I ++ G A+ L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 212 FKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYS 271
V + + T +++L C + L+ ++ + +++IS+Y
Sbjct: 285 LDMVR-NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 272 KCGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNF 327
+CG A + F EL+++ + +N++L A A+ +T + E+++QM+ +G K +
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK-DE 402
Query: 328 ITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIE 387
+T+ +++ G ++ ++ MK G P + Y ++D LG+A + +A ++
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 388 EM---PMEPTESVWGALLTGCRIHGDTELA 414
EM ++PT + AL+ G G E A
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 157 DVFVASSLVDMYAKCGEIGYARNVFDEM----PHRNVVSWSGMIYGYVQLGEDEEALRLF 212
D+ +SL+ YA+CG AR +F+ M P V S + +++ G EE
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELY--- 842
Query: 213 KQVLVEE--DVGVNDFTLSSVLRVCGA----STLLELGKQIHGWCFKTSFDSSCFVASSL 266
V+VEE D+G + SS+L + A + E+ K+I+ + + + +
Sbjct: 843 --VVVEELQDMGFK-ISKSSILLMLDAFARAGNIFEV-KKIYSSMKAAGYLPTIRLYRMM 898
Query: 267 ISLYSKCGAVEGAYQAFEELQVRN----LGMWNAMLIACAQHAHTNRTFELFEQMKSVGG 322
I L K V A E++ N L +WN+ML +T ++++++K G
Sbjct: 899 IELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG- 957
Query: 323 VKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDA 382
++P+ T+ ++ E+G + M+ + G++P Y +++ G+ L+ A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR-NLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 383 VQVIEEM 389
Q+ EE+
Sbjct: 1017 EQLFEEL 1023
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 156/357 (43%), Gaps = 28/357 (7%)
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
T++S+++ ++ LALD R+M + D T S I +SL
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLG 203
V +SLV K G+ + +M R NV++++ ++ +V+ G
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVL-------RVCGASTLLELGKQIHGWCFKTSF 256
+ +EA L+K+ ++ + N T ++++ R+ A+ +L+L + C S
Sbjct: 313 KLQEANELYKE-MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL--MVRNKC---SP 366
Query: 257 DSSCFVASSLISLYSKCGAVEGAYQAFEELQVR----NLGMWNAMLIACAQHAHTNRTFE 312
D F +SLI Y V+ + F + R N ++ ++ Q E
Sbjct: 367 DIVTF--TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 313 LFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDL 372
LF++M S GV P+ +T+ +L G +EK FE ++K ++ G Y T+++
Sbjct: 425 LFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMDLGIVMYTTIIEG 482
Query: 373 LGRAGKLQDAVQVIEEMP---MEPTESVWGALLTGCRIHGDTELASYVADRVFEQGH 426
+ + GK++DA + +P ++P + +++G G A+ + ++ E G+
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 63 LINFYSKTQLPNSSLQVFNSSPHR----SATTWSSLISSFAQNDLPHLALDFFRQMLRIG 118
LI Y + + ++VF + R +A T+S L+ F Q+ LA + F++M+ G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 119 LLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYAR 178
+LPD + L + K+ L + + +++++ K G++ A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 179 NVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGV-NDFTLSSVLR 233
N+F +P + NV++++ MI G + G EA L ++ +EED ND T ++++R
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK--MEEDGNAPNDCTYNTLIR 551
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 151/348 (43%), Gaps = 30/348 (8%)
Query: 90 TWSS-----LISSFAQNDLPHLALDFFRQML-RIGLLPDDHILPTAAKSCAALSSIHVGL 143
+WS+ ++ F + AL+F ++M + G PD + T + +
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 144 SLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGY 199
+ + L+ Y DV+ +S++ K GE+ A V D+M R N V+++ +I
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 200 VQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLR-VCGASTLLELGKQIHGWCFKTSFDS 258
+ + EEA L +VL + + + T +S+++ +C L ++ F+
Sbjct: 376 CKENQVEEATEL-ARVLTSKGILPDVCTFNSLIQGLC-----LTRNHRVAMELFEEMRSK 429
Query: 259 SC----FVASSLISLYSKCGAVEGAYQAFEELQV----RNLGMWNAMLIACAQHAHTNRT 310
C F + LI G ++ A +++++ R++ +N ++ + T
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
E+F++M+ V GV N +T+ ++ + VE + M + G +P Y +++
Sbjct: 490 EEIFDEME-VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME-GQKPDKYTYNSLL 547
Query: 371 DLLGRAGKLQDAVQVIEEMP---MEPTESVWGALLTGCRIHGDTELAS 415
R G ++ A +++ M EP +G L++G G E+AS
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 136/339 (40%), Gaps = 47/339 (13%)
Query: 90 TWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALA 149
T++ LI + D+ +A D F Q+ G +PD
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD--------------------------- 819
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP----HRNVVSWSGMIYGYVQLGED 205
V + L+D Y K G+I ++ EM N ++ + +I G V+ G
Sbjct: 820 --------VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 206 EEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASS 265
++AL L+ ++ + D T ++ S L KQ+ +C + +
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 266 LISLYSKCGAVEGAYQAFEEL---QVR-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVG 321
LI+ + K G + A F+ + VR +L ++ ++ + F+++K
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE-S 990
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
G+ P+ + + ++ + +E+ F MK GI P Y +++ LG AG +++
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 382 AVQVIEEMP---MEPTESVWGALLTGCRIHGDTELASYV 417
A ++ E+ +EP + AL+ G + G E A V
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 48/380 (12%)
Query: 21 NYRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVF 80
N T + L L L+L ++ G++ I++Y K+ S+L+ F
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 81 NS------SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCA 134
+P+ A S + S A+ A F + IGL+PD K +
Sbjct: 457 EKMKTKGIAPNIVACNAS--LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 135 ALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVV 190
+ I + L + ++ DV V +SL++ K + A +F M VV
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 191 SWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGW 250
+++ ++ G + G+ +EA+ LF+ + V + C +T+
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGM---------------VQKGCPPNTI---------- 609
Query: 251 CFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLGMWNAMLIACAQHAHTNRT 310
F T FD C + ++L A++ ++ + V ++ +N ++ ++
Sbjct: 610 TFNTLFD--CLCKNDEVTL-----ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
F QMK + V P+F+T +L A L+E + +P + + ++
Sbjct: 663 MCFFHQMKKL--VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720
Query: 371 -DLLGRAGKLQDAVQVIEEM 389
+L AG + +AV E +
Sbjct: 721 GSILAEAG-IDNAVSFSERL 739
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 15/277 (5%)
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPH----RNVVSWSGMIYGYVQLG 203
L + + D +++V + + G + DEM N V+++ +I+ Y +
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
+EA+ +F Q + E + T +++ + + L++ ++ + F
Sbjct: 409 YLKEAMNVFNQ-MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTY 467
Query: 264 SSLISLYSKCGAVEGAYQAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
S +I+ K G + A++ F E+ NL +N M+ A+ + +L+ M++
Sbjct: 468 SVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G +P+ +T+ V+ H G +E+ + F M++ + P Y +VDL G+AG +
Sbjct: 528 AG-FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNV 585
Query: 380 QDAVQVIEEM---PMEPTESVWGALL-TGCRIHGDTE 412
A Q + M + P +LL T R+H +E
Sbjct: 586 DKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSE 622
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 14/264 (5%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+ T++ LI S+ + + A++ F QM G PD T A + + + ++
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQL 202
+ D F S +++ K G + A +F EM + N+V+++ MI + +
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKA 512
Query: 203 GEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
E AL+L++ + ++ G + T S V+ V G LE + + + ++
Sbjct: 513 RNYETALKLYRDM---QNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Query: 261 FVASSLISLYSKCGAVEGA---YQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQ 316
V L+ L+ K G V+ A YQA + +R N+ N++L + + + L +
Sbjct: 570 PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQS 629
Query: 317 MKSVGGVKPNFITFLCVLYACSHA 340
M ++ G+ P+ T+ +L C+ A
Sbjct: 630 MLAL-GLHPSLQTYTLLLSCCTDA 652
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 141/334 (42%), Gaps = 24/334 (7%)
Query: 88 ATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHA 147
T SSLI+ F Q + A+D +M +G PD I T + ++ + L
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLG 203
+ D +SLV G A + +M R NV++++ +I +V+ G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 204 EDEEALRLFKQV---LVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+ EA++L++++ V+ DV FT +S++ ++ KQ+
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDV----FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 261 FVASSLISLYSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFELFEQ 316
++LI+ + K V+ + F E+ R L +N ++ Q + E+F +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 317 MKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRA 376
M S +PN T+ +LY VEK FE M+K IE Y ++ + +
Sbjct: 375 MDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKS-EIELDITTYNIVIHGMCKI 429
Query: 377 GKLQDAVQVIEEMP---MEPTESVWGALLTG-CR 406
G ++DA + + ++P + +++G CR
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 170/407 (41%), Gaps = 29/407 (7%)
Query: 27 NHLLALTHSRSLRRGLQLHAHIIKTG--LETIPLLSHHLINFY---SKTQLPNSSLQVFN 81
NHL + + L G + +++ G + IP + LI + KT+ L++
Sbjct: 107 NHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTT--LIRGFCRLGKTRKAAKILEILE 164
Query: 82 SSPH-RSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIH 140
S T++ +IS + + + AL R+ + PD T +S +
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLK 221
Query: 141 VGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMI 196
+ + L+ + DV + L++ + +G+A + DEM R +VV+++ ++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 197 YGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLR-VCGASTLLELGKQIHGWCFKTS 255
G + G +EA++ F + N T + +LR +C ++ K + +
Sbjct: 282 NGICKEGRLDEAIK-FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKG 339
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEEL-----QVRNLGMWNAMLIACAQHAHTNRT 310
F S + LI+ + G + A E++ Q +L +N +L + +R
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS-YNPLLHGFCKEKKMDRA 398
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
E E+M S G P+ +T+ +L A G VE + G P Y T++
Sbjct: 399 IEYLERMVS-RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVI 456
Query: 371 DLLGRAGKLQDAVQVIEEM---PMEPTESVWGALLTGCRIHGDTELA 414
D L +AGK A+++++EM ++P + +L+ G G + A
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 11/250 (4%)
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP----HRNVVSWSGMIYGYVQLG 203
L + + D +++V + + G + DEM N V+++ +I+ Y +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
EA+ +F Q + E + T +++ + + L++ ++ F
Sbjct: 414 YLNEAMNVFNQ-MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 264 SSLISLYSKCGAVEGAYQAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
S +I+ K G + A++ F E+ NL +N M+ A+ + +L+ M++
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G +P+ +T+ V+ H G +E+ + F M++ I P Y +VDL G+AG +
Sbjct: 533 AG-FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNV 590
Query: 380 QDAVQVIEEM 389
+ A Q + M
Sbjct: 591 EKAWQWYQAM 600
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+ T++ LI S+ + + + A++ F QM G PD T A + + + ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQL 202
D F S +++ K G + A +F EM + N+V+++ M+ + +
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 203 GEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+ AL+L++ + ++ G + T S V+ V G LE + + + ++
Sbjct: 518 RNYQNALKLYRDM---QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 261 FVASSLISLYSKCGAVEGAYQAFEEL---QVR-NLGMWNAMLIACAQHAHTNRTFELFEQ 316
V L+ L+ K G VE A+Q ++ + +R N+ N++L + +EL +
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 317 MKSVGGVKPNFITFLCVLYACS 338
M ++ G++P+ T+ +L C+
Sbjct: 635 MLAL-GLRPSLQTYTLLLSCCT 655
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 11/250 (4%)
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP----HRNVVSWSGMIYGYVQLG 203
L + + D +++V + + G + DEM N V+++ +I+ Y +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
EA+ +F Q + E + T +++ + + L++ ++ F
Sbjct: 414 YLNEAMNVFNQ-MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 264 SSLISLYSKCGAVEGAYQAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
S +I+ K G + A++ F E+ NL +N M+ A+ + +L+ M++
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G +P+ +T+ V+ H G +E+ + F M++ I P Y +VDL G+AG +
Sbjct: 533 AG-FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNV 590
Query: 380 QDAVQVIEEM 389
+ A Q + M
Sbjct: 591 EKAWQWYQAM 600
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+ T++ LI S+ + + + A++ F QM G PD T A + + + ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQL 202
D F S +++ K G + A +F EM + N+V+++ M+ + +
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 203 GEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+ AL+L++ + ++ G + T S V+ V G LE + + + ++
Sbjct: 518 RNYQNALKLYRDM---QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 261 FVASSLISLYSKCGAVEGAYQAFEEL---QVR-NLGMWNAMLIACAQHAHTNRTFELFEQ 316
V L+ L+ K G VE A+Q ++ + +R N+ N++L + +EL +
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 317 MKSVGGVKPNFITFLCVLYACS 338
M ++ G++P+ T+ +L C+
Sbjct: 635 MLAL-GLRPSLQTYTLLLSCCT 655
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 11/250 (4%)
Query: 148 LALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMP----HRNVVSWSGMIYGYVQLG 203
L + + D +++V + + G + DEM N V+++ +I+ Y +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 204 EDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVA 263
EA+ +F Q + E + T +++ + + L++ ++ F
Sbjct: 414 YLNEAMNVFNQ-MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY 472
Query: 264 SSLISLYSKCGAVEGAYQAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQMKS 319
S +I+ K G + A++ F E+ NL +N M+ A+ + +L+ M++
Sbjct: 473 SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Query: 320 VGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKL 379
G +P+ +T+ V+ H G +E+ + F M++ I P Y +VDL G+AG +
Sbjct: 533 AG-FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNV 590
Query: 380 QDAVQVIEEM 389
+ A Q + M
Sbjct: 591 EKAWQWYQAM 600
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLH 146
+ T++ LI S+ + + + A++ F QM G PD T A + + + ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 147 ALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQL 202
D F S +++ K G + A +F EM + N+V+++ M+ + +
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 203 GEDEEALRLFKQVLVEEDVGV--NDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSC 260
+ AL+L++ + ++ G + T S V+ V G LE + + + ++
Sbjct: 518 RNYQNALKLYRDM---QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 261 FVASSLISLYSKCGAVEGAYQAFEEL---QVR-NLGMWNAMLIACAQHAHTNRTFELFEQ 316
V L+ L+ K G VE A+Q ++ + +R N+ N++L + +EL +
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 317 MKSVGGVKPNFITFLCVLYACS 338
M ++ G++P+ T+ +L C+
Sbjct: 635 MLAL-GLRPSLQTYTLLLSCCT 655
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 166/380 (43%), Gaps = 30/380 (7%)
Query: 31 ALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFN----SSPHR 86
ALT + L L + + K GL+ +L + +IN S++ + ++++F S
Sbjct: 363 ALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKP 422
Query: 87 SATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL-PDDHILPTAAKSCAALSSIHVGLSL 145
+A+T+++LI + + + MLR +L P+D ++ I ++
Sbjct: 423 TASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNI 482
Query: 146 HALALKTAYHLDVFVASSLVDMYAKCGEIGYARN-VFDEMPHR----NVVSWSGMIYGYV 200
DV ++L YA+ G A + + M H NV + ++ GY
Sbjct: 483 VYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYC 542
Query: 201 QLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLR-------VCGASTLLELGKQIHGWCFK 253
+ G+ EEALR F + + E V N F +S+++ + G +++L ++ F
Sbjct: 543 EEGKMEEALRFFYR-MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE-----FG 596
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV----RNLGMWNAMLIACAQHAHTNR 309
D F S+L++ +S G ++ + + ++ ++ ++ + A+ +
Sbjct: 597 VKPDVVTF--STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATM 369
++ QM+ G V+PN + + ++ AG ++K ++ M G+ P Y T+
Sbjct: 655 AEQILNQMRKFG-VRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 370 VDLLGRAGKLQDAVQVIEEM 389
+ G A + A +++++M
Sbjct: 714 IWGFGEAKQPWKAEELLKDM 733
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 157/377 (41%), Gaps = 49/377 (12%)
Query: 92 SSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALK 151
+ L++ + P A F ++ G P T + H LSL + K
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 152 TAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEE 207
D + +++++ ++ G + A +F++M +++ +I GY ++G+ EE
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 208 ALRLFKQVLVEEDVGVNDFTLSSVLR--------------------------VCGASTLL 241
+ RL +L +E + ND T + +++ V +TL
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 242 ELGKQIHGWC----------FKTSFDSSCFVASSLISLYSKCGAVEGAYQAF---EELQV 288
+ +I C + ++++ Y + G +E A + F +EL V
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 289 R-NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ 347
NL ++N+++ + E+ + M+ GVKP+ +TF ++ A S G +++ +
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF-GVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 348 HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMP---MEPTESVWGALLTG 404
+ M + GI+P ++ + RAG+ + A Q++ +M + P ++ +++G
Sbjct: 622 EIYTDMLEG-GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 405 CRIHGDTELASYVADRV 421
G+ + A V ++
Sbjct: 681 WCSAGEMKKAMQVYKKM 697
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 183/420 (43%), Gaps = 21/420 (5%)
Query: 22 YRTICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFN 81
Y T+ N L H + R ++ A ++++GL L+ K + +VF+
Sbjct: 308 YNTVINGLCK--HGK-YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 82 SSPHRSATT----WSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALS 137
R +SS++S F ++ AL +F + GL+PD+ I +
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 138 SIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRNVV----SWS 193
I V ++L L+ +DV ++++ K +G A +F+EM R + + +
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 194 GMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFK 253
+I G+ +LG + A+ LF Q + E+ + ++ T +++L G ++ K+I
Sbjct: 485 ILIDGHCKLGNLQNAMELF-QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 254 TSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNR 309
+ S L++ G + A++ ++E+ +N+ + N+M+ + + +
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 310 TFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY-GIEPGSQHYAT 368
E+M S G V P+ I++ ++Y + K + M+++ G+ P Y +
Sbjct: 604 GESFLEKMISEGFV-PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 369 MVDLLGRAGKLQDAVQVIEEM---PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
++ R ++++A V+ +M + P S + ++ G + A + D + ++G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 158/350 (45%), Gaps = 27/350 (7%)
Query: 61 HHLINFYSKTQLPNSSLQVFNSSPHRSAT----TWSSLISSFAQNDLPHLALDFFRQMLR 116
+ LI+ YS L + ++ N+ P + + T++++I+ ++ A + F +MLR
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 117 IGLLPDD----HILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCG 172
GL PD +L A K + + V + + + D+ SS++ ++ + G
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP----DLVCFSSMMSLFTRSG 389
Query: 173 EIGYARNVFDEMPHRNVVS----WSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTL 228
+ A F+ + ++ ++ +I GY + G A+ L ++L ++ ++ T
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML-QQGCAMDVVTY 448
Query: 229 SSVLR-VCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQ 287
+++L +C L E K + + F S + + LI + K G ++ A + F++++
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDS-YTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 288 VRNLGM----WNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA-CSHAGL 342
+ + + +N +L + + E++ M S + P I++ ++ A CS L
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS-KEILPTPISYSILVNALCSKGHL 566
Query: 343 VEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME 392
E + + E++ K+ I+P +M+ R+G D +E+M E
Sbjct: 567 AEAFRVWDEMISKN--IKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 139/345 (40%), Gaps = 51/345 (14%)
Query: 80 FNSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
F SP+ +++LI S + H A F +M +IGL P+D +
Sbjct: 361 FGVSPN--LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRN----VVSWSGM 195
LS + T L V+ +SL++ + K G+I A EM ++ VV+++ +
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
+ GY G+ +ALRL+ ++ GK I
Sbjct: 479 MGGYCSKGKINKALRLYHEMT---------------------------GKGIA------- 504
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTF 311
S + ++L+S + G + A + F E+ N+ +N M+ + ++ F
Sbjct: 505 --PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 312 ELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVD 371
E ++M G+ P+ ++ +++ G + + + + + K E Y ++
Sbjct: 563 EFLKEMTE-KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG-NCELNEICYTGLLH 620
Query: 372 LLGRAGKLQDAVQVIEEMPMEPTE---SVWGALLTGCRIHGDTEL 413
R GKL++A+ V +EM + +G L+ G H D +L
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 158/363 (43%), Gaps = 25/363 (6%)
Query: 150 LKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHRN----VVSWSGMIYGYVQLGED 205
L + L+V+V + L++ + K G I A+ VFDE+ R+ VVS++ +I GY ++G
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 206 EEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASS 265
+E RL K + + + FT S+++ ++ + K + + ++
Sbjct: 292 DEGFRL-KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 266 LISLYSKCGAVEGAYQAFEELQVRNLG----MWNAMLIACAQHAHTNRTFELFEQMKSVG 321
LI +S+ G ++ ++++++ + L ++N ++ ++ + + M
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR-R 409
Query: 322 GVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQD 381
G++P+ IT+ ++ G VE + M ++ GIE ++ +V + + G++ D
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQN-GIELDRVGFSALVCGMCKEGRVID 468
Query: 382 AVQVIEEM---PMEPTESVWGALLTGCRIHGDTELASYVADRVFEQGHVSSGL--NVLLS 436
A + + EM ++P + + ++ GD + + + GHV S + NVLL+
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528
Query: 437 NXXXXXXXXXXXXXXXKMLRDQGIKKETGLSWVEEGNRVHTFAAGDRSHAKTVEIYNKLE 496
ML + V + +T G HA + + Y +
Sbjct: 529 GLCKLGQMKNADMLLDAML---------NIGVVPDDITYNTLLEGHHRHANSSKRYIQKP 579
Query: 497 ELG 499
E+G
Sbjct: 580 EIG 582
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 151/349 (43%), Gaps = 20/349 (5%)
Query: 43 QLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSL----QVFNSSPHRSATTWSSLISSF 98
++ I K L+ + + LIN Y K + Q+ S T+S+LI++
Sbjct: 261 KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320
Query: 99 AQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDV 158
+ + A F +M + GL+P+D I T + I + + L D+
Sbjct: 321 CKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380
Query: 159 FVASSLVDMYAKCGEIGYARNVFDEMPHRNV----VSWSGMIYGYVQLGEDEEALRLFKQ 214
+ ++LV+ + K G++ ARN+ D M R + ++++ +I G+ + G+ E AL + K+
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440
Query: 215 VLVEEDVGVNDFTLSS-VLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKC 273
+ + + ++ S+ V +C +++ + + + + ++ + K
Sbjct: 441 -MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM-LRAGIKPDDVTYTMMMDAFCKK 498
Query: 274 GAVEGAYQAFEELQ----VRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFIT 329
G + ++ +E+Q V ++ +N +L + L + M ++ GV P+ IT
Sbjct: 499 GDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI-GVVPDDIT 557
Query: 330 FLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGK 378
+ +L H + Y + K + GI Y ++V+ L RA K
Sbjct: 558 YNTLLEG--HHRHANSSKRYIQ--KPEIGIVADLASYKSIVNELDRASK 602
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/418 (18%), Positives = 184/418 (44%), Gaps = 20/418 (4%)
Query: 24 TICNHLLALTHSRSLRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSLQVFNS- 82
T + +LA ++ ++L ++ G+ + + LI + K S+L +F+
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 83 ---SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSI 139
P ++ T+S LI F +N AL+F+++M +GL P + T +
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 140 HVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGM 195
L L + +T +VFV ++++ K G+ A + +M R NVVS++ +
Sbjct: 426 EEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 196 IYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTS 255
+ G+ + + A +F +L E+ + N++T S ++ C + + ++ ++
Sbjct: 485 MLGHCRQKNMDLARIVFSNIL-EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 256 FDSSCFVASSLISLYSKCGAVEGAYQAFEEL-QVRNLGM----WNAMLIACAQHAHTNRT 310
+ + V ++I+ K G A + + + + L + +N+++ + +
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 311 FELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMV 370
+E+M G+ PN IT+ ++ +++ + M K+ G++ Y ++
Sbjct: 604 VAAYEEMCG-NGISPNVITYTSLMNGLCKNNRMDQALEMRDEM-KNKGVKLDIPAYGALI 661
Query: 371 DLLGRAGKLQDAVQVIEEMPME---PTESVWGALLTGCRIHGDTELASYVADRVFEQG 425
D + ++ A + E+ E P++ ++ +L++G R G+ A + ++ + G
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 159/391 (40%), Gaps = 44/391 (11%)
Query: 58 LLSHHLINFYSKTQLPNSSLQVFNSSPHR----SATTWSSLISSFAQNDLPHLALDFFRQ 113
+L LIN Y K + + S + A T++ L++ +ND A + FR+
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 114 MLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGE 173
M G+ PD + L ++ S+ ++ +V + + L+ + + GE
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 174 IGYARNVFDEMP----HRNVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLS 229
I A+ + DEM H N V++ +I GY + G+ EA RLF ++ ++ V + F +
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DSFVYT 736
Query: 230 SVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVR 289
+++ C +E I G K SS ++LI+ K G E + L
Sbjct: 737 TLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM-- 793
Query: 290 NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF-LCVLYACSHAGLVEKGQH 348
+ +F+ F KPN +T+ + + Y C L E +
Sbjct: 794 ------------------DGSFDRFG--------KPNDVTYNIMIDYLCKEGNL-EAAKE 826
Query: 349 YFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM---PMEPTESVWGALLTGC 405
F M+ + + P Y ++++ + G+ + V +E +EP ++ ++
Sbjct: 827 LFHQMQ-NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 406 RIHGDTELASYVADRVFEQGHVSSGLNVLLS 436
G T A + D++F + V G + +S
Sbjct: 886 LKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 145/360 (40%), Gaps = 52/360 (14%)
Query: 83 SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVG 142
SP+ T + SS DL A + ++M+ G P+ I T K+ S
Sbjct: 416 SPYTYGTVVKGMCSS---GDLDG-AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 143 LSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYG 198
+ + + D+F +SL+ +K + AR+ EM N ++ I G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 199 YVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGA--STLLELGKQIHGWCFKTSF 256
Y++ E A + K+ +R CG + +L G I+ +C K
Sbjct: 532 YIEASEFASADKYVKE-----------------MRECGVLPNKVLCTG-LINEYCKKGKV 573
Query: 257 DSSCFVASSLIS--------LYS-------KCGAVEGAYQAFEELQVRNLG----MWNAM 297
+C S++ Y+ K V+ A + F E++ + + + +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 298 LIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYFELMKKDY 357
+ ++ + + +F++M G+ PN I + +L +G +EK + + M
Sbjct: 634 INGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK- 691
Query: 358 GIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME---PTESVWGALLTGCRIHGDTELA 414
G+ P + Y T++D ++G L +A ++ +EM ++ P V+ L+ GC D E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 147/342 (42%), Gaps = 46/342 (13%)
Query: 91 WSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALAL 150
++++I + + AL+ F +M G+ P+ + + L + +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 151 KTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDE 206
+ + +V S+L+D + K G++ A ++DEM R ++ ++S +I G+ +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 207 EALRLFKQVLVEEDVGVNDFTLSSVLR-VCGASTL---LELGKQ---------------- 246
EA +F ++++ +D N T +++++ C A + +EL ++
Sbjct: 379 EAKHMF-ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 247 IHGWCFKTSFDSSCFVASSLIS-------------LYSKC--GAVEGAYQAFEELQVR-- 289
IHG+ D++ V ++S L C G VE A FE LQ
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 290 --NLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQ 347
++ +N M+ + ++LF + S+ GVKPN +T+ ++ GL E+
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 348 HYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
F MK++ G P S Y T++ R G + ++I EM
Sbjct: 557 ALFREMKEE-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 148/345 (42%), Gaps = 30/345 (8%)
Query: 63 LINFYSKTQLPNSSLQVFNS------SPHRSATTWSSLISSFAQNDLPHLALDFFRQMLR 116
L+ +Y+K + N S+ VF PH A T L++S + L F++M++
Sbjct: 139 LMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACT--VLLNSLVKQRLTDTVWKIFKKMVK 196
Query: 117 IGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGY 176
+G++ + H+ +C+ L + + D+F ++L+ +Y K
Sbjct: 197 LGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFE 256
Query: 177 ARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVL 232
A +V D M N+V+++ I+G+ + G EA RLF++ +++DV N T ++++
Sbjct: 257 ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE--IKDDVTANHVTYTTLI 314
Query: 233 ----RVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQV 288
R+ L L + + F +S++ + G + A + E+
Sbjct: 315 DGYCRMNDIDEALRLREVMES----RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370
Query: 289 RNLG----MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYA-CSHAGLV 343
+ + N ++ A + ++ ++M G+K + ++ +++ C L
Sbjct: 371 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIE-SGLKLDMYSYKALIHGFCKVLELE 429
Query: 344 EKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEE 388
+ F +++K G PG Y+ +VD K + +++EE
Sbjct: 430 NAKEELFSMIEK--GFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 154/372 (41%), Gaps = 53/372 (14%)
Query: 67 YSKTQLPNSSLQVF------NSSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLL 120
Y + P SL+VF + P + A + ++++ + + +LA F++ M IGL
Sbjct: 96 YGRVHRPFDSLRVFHKMKDFDCDPSQKA--YVTVLAILVEENQLNLAFKFYKNMREIGLP 153
Query: 121 PDDHILPTAAKS-CAALSSIHVGLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARN 179
P L K+ C ++ GL + K D + +L+ + G I A+
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 180 VFDEMPHRN----VVSWSGMIYGYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVC 235
+F EM ++ VV+++ +I G +EA+R ++ + + + N FT SS++
Sbjct: 214 LFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE-MKSKGIEPNVFTYSSLM--- 269
Query: 236 GASTLLELGKQIHGW-CFKTSFDSSC----FVASSLISLYSKCGAVEGAYQAFEELQVRN 290
L + G+ + F+ C ++LI+ K ++ A + + + ++
Sbjct: 270 --DGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 291 L----GMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITF-------------LCV 333
L G++ ++ + ++M +GG+ PN +T+ LC
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEM-ILGGITPNRLTWNIHVKTSNEVVRGLCA 386
Query: 334 LYACSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME- 392
Y L L + GI + ++V L + G+ Q AVQ+++E+ +
Sbjct: 387 NYPSRAFTLY--------LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDG 438
Query: 393 --PTESVWGALL 402
P++ W L+
Sbjct: 439 CIPSKGTWKLLI 450
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 234 VCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVEGAYQAFEELQVRNLG- 292
+C ++ G +I K D + +LIS + G ++ A + F E+ ++
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Query: 293 ---MWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHY 349
+ +++ + + E+MKS G++PN T+ ++ G +
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKS-KGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 350 FELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPME---PTESVWGALLTG-C 405
FE+M G P Y T++ L + K+Q+AV++++ M ++ P ++G +++G C
Sbjct: 285 FEMMMA-RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 406 RIHGDTELASYVADRVF 422
I E A+++ + +
Sbjct: 344 AISKFREAANFLDEMIL 360
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 145/337 (43%), Gaps = 45/337 (13%)
Query: 82 SSPHRSATTWSSLISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHV 141
S P S ++ L+S+ A+ + L + QM +G+ D + S + +
Sbjct: 77 SRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL 136
Query: 142 GLSLHALALKTAYHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIY 197
L++ A +K Y D+ SSL++ Y I A + D+M + +++ +I+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 198 GYVQLGEDEEALRLFKQVLVEEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFD 257
G + EA+ L Q+ V R C L+ G ++G C + D
Sbjct: 197 GLFLHNKASEAVALVDQM---------------VQRGCQPD-LVTYGTVVNGLCKRGDID 240
Query: 258 SSCFVASSLISLYSKCGAVEGAYQAFEELQVR-NLGMWNAMLIACAQHAHTNRTFELFEQ 316
+ ++L +K E +++ N+ ++N ++ + ++ H +LF +
Sbjct: 241 LA-------LNLLNK----------MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 317 MKSVGGVKPNFITFLCVLYA-CSHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGR 375
M++ G++PN +T+ ++ C++ + + +++K I P + ++D +
Sbjct: 284 MET-KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK--INPNVVTFNALIDAFFK 340
Query: 376 AGKLQDAVQVIEEM---PMEPTESVWGALLTGCRIHG 409
GKL +A ++ EEM ++P + L+ G +H
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 167/414 (40%), Gaps = 50/414 (12%)
Query: 38 LRRGLQLHAHIIKTGLETIPLLSHHLINFYSKTQLPNSSL----QVFNSSPHRSATTWSS 93
L L + A ++K G E + L+N Y ++ + ++ Q+ T+++
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 94 LISSFAQNDLPHLALDFFRQMLRIGLLPDDHILPTAAKSCAALSSIHVGLSLHALALKTA 153
LI ++ A+ QM++ G PD T I + L+L
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 154 YHLDVFVASSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEAL 209
+V + ++++D K + A ++F EM + NVV+++ +I G +A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 210 RLFKQVLVEEDVGVNDFTLSSVL-------RVCGASTLLELGKQ-------------IHG 249
RL +L E+ + N T ++++ ++ A L E Q I+G
Sbjct: 314 RLLSNML-EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 250 WC-----------FKTSFDSSCF----VASSLISLYSKCGAVEGAYQAFEELQVR----N 290
+C FK C ++LI+ + KC VE + F E+ R N
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 291 LGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYACSHAGLVEKGQHYF 350
+ ++ Q + +F+QM S V + +T+ +L+ G ++ F
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 351 ELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEMPMEPTESVWGALLTG 404
+ ++K +E Y TM++ + +AGK+ +A + + ++P + +++G
Sbjct: 492 KYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 162 SSLVDMYAKCGEIGYARNVFDEMPHR----NVVSWSGMIYGYVQLGEDEEALRLFKQVLV 217
++L++ + KC + +F EM R N V+++ +I G+ Q G+ + A +FKQ +V
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ-MV 460
Query: 218 EEDVGVNDFTLSSVLRVCGASTLLELGKQIHGWCFKTSFDSSCFVASSLISLYSKCGAVE 277
V + T S +L HG C D++ +
Sbjct: 461 SNRVPTDIMTYSILL---------------HGLCSYGKLDTALVIFK------------- 492
Query: 278 GAYQAFEELQVRNLGMWNAMLIACAQHAHTNRTFELFEQMKSVGGVKPNFITFLCVLYAC 337
Y E+++ N+ ++N M+ + ++LF + +KP+ +T+ ++
Sbjct: 493 --YLQKSEMEL-NIFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGL 545
Query: 338 SHAGLVEKGQHYFELMKKDYGIEPGSQHYATMVDLLGRAGKLQDAVQVIEEM 389
L+++ F MK+D G P S Y T++ R + ++I+EM
Sbjct: 546 CSKRLLQEADDLFRKMKED-GTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596