Miyakogusa Predicted Gene

Lj1g3v4263380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4263380.1 Non Chatacterized Hit- tr|I1MLB7|I1MLB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23489
PE,53.33,0.00004,no description,NULL,CUFF.32145.1
         (73 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12840.1 | Symbols: DET3, ATVHA-C | vacuolar ATP synthase sub...    49   7e-07

>AT1G12840.1 | Symbols: DET3, ATVHA-C | vacuolar ATP synthase
           subunit C (VATC) / V-ATPase C subunit / vacuolar proton
           pump C subunit (DET3) | chr1:4375584-4378220 FORWARD
           LENGTH=375
          Length = 375

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/28 (78%), Positives = 24/28 (85%)

Query: 39  NDYALYTVTLFSHVADNFRNNAREKGIQ 66
           N+YALYTVTLF+ VADNFR  AREKG Q
Sbjct: 219 NEYALYTVTLFTRVADNFRIAAREKGFQ 246