Miyakogusa Predicted Gene
- Lj1g3v4241100.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4241100.2 Non Chatacterized Hit- tr|I1JNC4|I1JNC4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.93,0,HCP-like,NULL; TPR-like,NULL; PPR,Pentatricopeptide
repeat; PPR_2,Pentatricopeptide repeat; SUBFAMIL,CUFF.32122.2
(560 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 858 0.0
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 776 0.0
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 7e-56
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 205 6e-53
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 5e-52
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 8e-51
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 2e-50
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 5e-49
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 9e-49
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 191 1e-48
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 191 2e-48
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 190 2e-48
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 190 3e-48
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 1e-47
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 3e-46
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 3e-46
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 182 7e-46
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 5e-45
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 178 1e-44
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 176 6e-44
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 173 4e-43
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 6e-43
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 8e-43
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 1e-42
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 4e-42
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 5e-42
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 6e-41
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 7e-40
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 9e-40
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 161 1e-39
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 8e-39
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 158 1e-38
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 155 7e-38
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 1e-37
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 2e-35
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 147 2e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 147 3e-35
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 3e-35
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-34
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-34
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 144 1e-34
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 4e-34
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 3e-33
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 133 3e-31
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 132 6e-31
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 129 4e-30
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 8e-30
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 8e-30
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 127 2e-29
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 127 2e-29
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 5e-29
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 9e-29
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 9e-29
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 123 4e-28
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 120 2e-27
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 120 2e-27
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 118 1e-26
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 117 2e-26
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 116 5e-26
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 114 2e-25
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 113 3e-25
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 112 6e-25
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 110 2e-24
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 110 2e-24
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 106 4e-23
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 106 5e-23
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 102 6e-22
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 102 7e-22
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 100 2e-21
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 100 4e-21
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 100 4e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 8e-21
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 97 2e-20
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 97 3e-20
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 96 8e-20
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 95 1e-19
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 94 2e-19
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 94 2e-19
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 94 4e-19
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 90 4e-18
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 90 4e-18
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 89 1e-17
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 88 1e-17
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 88 2e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 85 1e-16
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 81 2e-15
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 81 2e-15
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 79 6e-15
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 78 2e-14
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 78 2e-14
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 77 2e-14
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 75 9e-14
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 75 9e-14
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 75 9e-14
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 75 2e-13
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 74 2e-13
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 74 2e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 5e-11
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 65 2e-10
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 65 2e-10
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 64 2e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 64 2e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 7e-10
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 59 9e-09
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 53 6e-07
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/541 (72%), Positives = 470/541 (86%)
Query: 2 DWTVSEVAEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMK 61
DW+VSEV +++++L ++++DG+LN WVGRFARKNFP LI+EL++RG IE C VF+WMK
Sbjct: 75 DWSVSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMK 134
Query: 62 NQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
Q+NYCARNDIYNMMIRLHARHN +DQARGLFFEMQ+W CKPDAETY+ALINAHGRAGQW
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 194
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
RWAMN+MDDMLRAAI PSRSTYNNLINACGSSGNW+EAL VCKKMTDNGVGPDLVTHNI+
Sbjct: 195 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 254
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS 241
LSA+KSG QYSKALSYFELMKG +RPDTTT NI+I+CL KL Q +A+D+FNSMREK++
Sbjct: 255 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 314
Query: 242 ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEA 301
EC PDVV++TSI+HLYSV G+IENC A F M+AEG+KP+IVSYNAL+GAYA HGM A
Sbjct: 315 ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTA 374
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
L V +IKQNG PD+VSYT LLN+YGRS++P KA+ VF M+++ + KPN+V+YNALIDA
Sbjct: 375 LSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 434
Query: 362 YGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLN 421
YGSNG L +A++I R+MEQDGI+PNVVS+CTLLAAC R +K ++TVLSAAQ RGI LN
Sbjct: 435 YGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 494
Query: 422 TVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFME 481
T AYNSAIGSY+N E +KA+ LY+SMRKKK+KADSVT+TILISGSC+MSKY EA+S+++
Sbjct: 495 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 554
Query: 482 EMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
EM L +P++KEVYSS+LCAYSKQGQ+ EAES FN MK +GC PDV+ YTSML AY A+
Sbjct: 555 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 614
Query: 542 K 542
K
Sbjct: 615 K 615
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 216/473 (45%), Gaps = 4/473 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N+++ + + +A F M+ + +PD T+N +I + GQ A+++ + M
Sbjct: 251 HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 310
Query: 133 --RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
RA P T+ ++++ G + V + M G+ P++V++N L+ A+
Sbjct: 311 EKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGM 370
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
ALS +K I PD + +++ + RQ KA ++F MR+++ + P+VV+Y
Sbjct: 371 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK--PNVVTY 428
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
++I Y +G + F M +GIKP++VS L+ A + V + +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
G + +Y S + +Y + + +KA +++ +++ K+K + V++ LI +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
AI L+EME I ++L A + Q + E++ + +M G + + +AY S +
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+Y ++ KA L+ M I+ DS+ + L+ K + M+ M ++P
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPF 668
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ V+ I A + + A +M S + ML + +GK+
Sbjct: 669 TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKV 721
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 139/319 (43%), Gaps = 8/319 (2%)
Query: 50 IEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYN 109
+E ++Q M+ ++ A + + ++I R ++ +A EM++ E Y+
Sbjct: 511 LEKAIALYQSMRKKK-VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYS 569
Query: 110 ALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN 169
+++ A+ + GQ A +I + M A P Y ++++A +S W +A + +M N
Sbjct: 570 SVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 629
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
G+ PD + + L+ AF G Q S +LM+ I + L+++ +A
Sbjct: 630 GIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRA 689
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
ID+ M + + ++HL+ SG++E F ++A G+ ++ +Y L+
Sbjct: 690 IDLIQMMDPYLPSLSIGLTN--QMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK 349
A G ++ + V + G +P Y +++ RS + FE + R KL+
Sbjct: 748 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE-----FEPLIRQKLE 802
Query: 350 PNLVSYNALIDAYGSNGLL 368
LI + G L
Sbjct: 803 SLRNKGEGLIPTFRHEGTL 821
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/483 (73%), Positives = 421/483 (87%)
Query: 60 MKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG 119
MK Q+NYCARNDIYNMMIRLHARHN +DQARGLFFEMQ+W CKPDAETY+ALINAHGRAG
Sbjct: 1 MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 60
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
QWRWAMN+MDDMLRAAI PSRSTYNNLINACGSSGNW+EAL VCKKMTDNGVGPDLVTHN
Sbjct: 61 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
I+LSA+KSG QYSKALSYFELMKG +RPDTTT NI+I+CL KL Q +A+D+FNSMREK
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
++EC PDVV++TSI+HLYSV G+IENC A F M+AEG+KP+IVSYNAL+GAYA HGM
Sbjct: 181 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 240
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
AL V +IKQNG PD+VSYT LLN+YGRS++P KA+ VF M+++ + KPN+V+YNALI
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
DAYGSNG L +A++I R+MEQDGI+PNVVS+CTLLAAC R +K ++TVLSAAQ RGI
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
LNT AYNSAIGSY+N E +KA+ LY+SMRKKK+KADSVT+TILISGSC+MSKY EA+S+
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
++EM L +P++KEVYSS+LCAYSKQGQ+ EAES FN MK +GC PDV+ YTSML AY A
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 540 AGK 542
+ K
Sbjct: 481 SEK 483
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 216/473 (45%), Gaps = 4/473 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N+++ + + +A F M+ + +PD T+N +I + GQ A+++ + M
Sbjct: 119 HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 178
Query: 133 --RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
RA P T+ ++++ G + V + M G+ P++V++N L+ A+
Sbjct: 179 EKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGM 238
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
ALS +K I PD + +++ + RQ KA ++F MR+++ + P+VV+Y
Sbjct: 239 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK--PNVVTY 296
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
++I Y +G + F M +GIKP++VS L+ A + V + +
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
G + +Y S + +Y + + +KA +++ +++ K+K + V++ LI +
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
AI L+EME I ++L A + Q + E++ + +M G + + +AY S +
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+Y ++ KA L+ M I+ DS+ + L+ K + M+ M ++P
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPF 536
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ V+ I A + + A +M S + ML + +GK+
Sbjct: 537 TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKV 589
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 133/299 (44%), Gaps = 8/299 (2%)
Query: 50 IEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYN 109
+E ++Q M+ ++ A + + ++I R ++ +A EM++ E Y+
Sbjct: 379 LEKAIALYQSMRKKK-VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYS 437
Query: 110 ALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN 169
+++ A+ + GQ A +I + M A P Y ++++A +S W +A + +M N
Sbjct: 438 SVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEAN 497
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
G+ PD + + L+ AF G Q S +LM+ I + L+++ +A
Sbjct: 498 GIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRA 557
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
ID+ M + + ++HL+ SG++E F ++A G+ ++ +Y L+
Sbjct: 558 IDLIQMMDPYLPSLSIGLTN--QMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 615
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
A G ++ + V + G +P Y +++ RS + FE + R KL
Sbjct: 616 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE-----FEPLIRQKL 669
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 243/495 (49%), Gaps = 38/495 (7%)
Query: 79 LHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPP 138
H + + +A F + ++++ D +I+ G+ G+ A N+ + +
Sbjct: 147 FHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSL 206
Query: 139 SRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQYSKALSY 197
+Y +LI+A +SG ++EA+NV KKM ++G P L+T+N++L+ F K G+ ++K S
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
E MK I PD T N +I C + + +A +F M K + D V+Y +++ +Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM--KAAGFSYDKVTYNALLDVY 324
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
S + + N M+ G PSIV+YN+L+ AYA GM EA+ + N++ + G +PD+
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
+YT+LL+ + R+ K + A +FE ++ KPN+ ++NA I YG+ G + +KI E
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
+ G+ P++V+ TLLA G+ ++ V + G +N+ I +Y G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
+++A+ +Y+ M + D TY +++ + + ++ + EM + ++ Y S
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 498 ILCAYSKQGQI-----------------------------------VEAESTFNLMKSSG 522
+L AY+ +I EAE F+ +K G
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 523 CSPDVVTYTSMLDAY 537
SPD+ T SM+ Y
Sbjct: 625 FSPDITTLNSMVSIY 639
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 237/516 (45%), Gaps = 40/516 (7%)
Query: 57 FQWMKNQRNYCA--RNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
F W Q++Y + N + ++I + + R+ A +F +QE D +Y +LI+A
Sbjct: 158 FDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISA 217
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN-WKEALNVCKKMTDNGVGP 173
+G++R A+N+ M P+ TYN ++N G G W + ++ +KM +G+ P
Sbjct: 218 FANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP 277
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFELMKG-------------------TH--------- 205
D T+N L++ K GS + +A FE MK +H
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 206 -------IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYS 258
P T N +I + D+A+++ N M EK ++ PDV +YT+++ +
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK--PDVFTYTTLLSGFE 395
Query: 259 VSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIV 318
+G++E+ + F M G KP+I ++NA + Y G E + +F+EI G PDIV
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 319 SYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
++ +LL +G++ + GVF+ +KR P ++N LI AY G + A+ + R M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
G+ P++ + T+LAA R + E VL+ + K N + Y S + +Y N E
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 439 DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSI 498
L + + I+ +V L+ K EA E+ +S+
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ Y ++ + +A + MK G +P + TY S++
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 214/414 (51%), Gaps = 2/414 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++ R +++ A +F EM+ CKP+ T+NA I +G G++ M I D++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P T+N L+ G +G E V K+M G P+ T N L+SA+ +
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A++ + M + PD +T N V+ L + ++++ + M + + C P+ ++Y S
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR--CKPNELTYCS 564
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++H Y+ +I + + + I+P V LV + + EA F+E+K+ G
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
F PDI + S+++ YGR Q KA GV + +K P++ +YN+L+ + + +
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+ILRE+ GI+P+++S T++ A R ++ + S + GI + + YN+ IGSY
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHL 486
+++A+G+ + M K + + TY ++ G CK+++ EA F+E++ +L
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNL 798
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 236/516 (45%), Gaps = 39/516 (7%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN +I R + +A +F EM+ D TYNAL++ +G++ + + AM ++++M+
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
PS TYN+LI+A G EA+ + +M + G PD+ T+ LLS F+ +
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A+S FE M+ +P+ T N I ++ + + IF+ + PD+V++ +
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI--NVCGLSPDIVTWNT 459
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++ ++ +G F M G P ++N L+ AY+ G ++A+ V+ + G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG------ 366
PD+ +Y ++L A R +++ V ++ + KPN ++Y +L+ AY +NG
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY-ANGKEIGLM 578
Query: 367 ------------------------------LLDDAIKILREMEQDGIQPNVVSICTLLAA 396
LL +A + E+++ G P++ ++ ++++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
GR K VL + RG + YNS + + ++ K+ + + + K IK D
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
++Y +I C+ ++ +A EM + + Y++ + +Y+ EA
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 517 LMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
M GC P+ TY S++D Y + + L ED
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 187/366 (51%), Gaps = 9/366 (2%)
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
I++S + S A + F ++ D + +I +Y +A+++F M E
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIEN-CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
C P +++Y I++++ G N + M ++GI P +YN L+ +
Sbjct: 238 G--CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
+EA VF E+K GF D V+Y +LL+ YG+S +P++A V + N P++V+YN+L
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA-AQMR- 416
I AY +G+LD+A+++ +M + G +P+V + TLL+ R GK+E+ +S +MR
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA---GKVESAMSIFEEMRN 412
Query: 417 -GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
G K N +N+ I Y N G++ + + ++ + + D VT+ L++ + E
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
+EM +E +++++ AYS+ G +A + + M +G +PD+ TY ++L
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 536 AYTAAG 541
A G
Sbjct: 533 ALARGG 538
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 185/405 (45%), Gaps = 45/405 (11%)
Query: 161 NVCKKMTDNGVGPD--LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV-- 216
N+ K + +G+ P V +++ F SG Q LS EL + +P++T+ ++
Sbjct: 85 NLGKPWSYHGLSPQGQQVLRSLIEPNFDSG-QLDSVLS--ELFEPFKDKPESTSSELLAF 141
Query: 217 IHCLVKLRQYDKAIDIFN-SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
+ L +++D A+ F+ M++K + D II + G++ + FN +
Sbjct: 142 LKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQE 201
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP-Q 334
+G + SY +L+ A+A G +EA+ VF +++++G +P +++Y +LN +G+ P
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
K + E +K + + P+ +YN LI L +A ++ EM+ G + V+ LL
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 395 AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
G+ + + VL+ + G + V YNS I +Y G D+A+ L M +K K
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
D TYT L+SG + + G++ A S
Sbjct: 382 PDVFTYTTLLSG-----------------------------------FERAGKVESAMSI 406
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYEDGFWKCML 559
F M+++GC P++ T+ + + Y GK E +K D C L
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFT-EMMKIFDEINVCGL 450
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 246/491 (50%), Gaps = 3/491 (0%)
Query: 54 NLVFQWMKNQRNYCARN-DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALI 112
+ VF + C N +Y+++IR++ R I + +F M + P T NA++
Sbjct: 146 SFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 205
Query: 113 NAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG 172
+ ++G+ + + +ML+ I P +T+N LIN + G+++++ + +KM +G
Sbjct: 206 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 265
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
P +VT+N +L + ++ A+ + MK + D T N++IH L + + K +
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
MR K HP+ V+Y ++I+ +S G++ N ML+ G+ P+ V++NAL+ +
Sbjct: 326 LRDMR--KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
+ G KEAL +F ++ G P VSY LL+ ++ + ARG + +KRN +
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
++Y +ID NG LD+A+ +L EM +DGI P++V+ L+ + + + ++
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
G+ N + Y++ I + +G +A+ +Y++M + D T+ +L++ CK K
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
EA FM M + + + ++ Y G+ ++A S F+ M G P TY S
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 533 MLDAYTAAGKM 543
+L G +
Sbjct: 624 LLKGLCKGGHL 634
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 226/473 (47%), Gaps = 5/473 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YNM+I R NRI + L +M++ P+ TYN LIN G+ A ++++ML
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P+ T+N LI+ S GN+KEAL + M G+ P V++ +LL +++
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A ++ MK + T +I L K D+A+ + N M K PD+V+Y++
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM--SKDGIDPDIVTYSA 483
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I+ + G+ + + + G+ P+ + Y+ L+ G KEA+ ++ + G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
D ++ L+ + ++ K +A + + + PN VS++ LI+ YG++G A
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+ EM + G P + +LL + + E L + ++TV YN+ + +
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK--LPV 490
G KA+ L+ M ++ I DS TYT LISG C+ K A+ F +E LP
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP- 722
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+K +Y+ + K GQ M + G +PD+VT +M+D Y+ GK+
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 214/524 (40%), Gaps = 46/524 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N+++ + ++ +A M P+ +++ LIN +G +G+ A ++ D+M
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P+ TY +L+ G+ +EA K + D V +N LL+A +
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
KA+S F M I PD+ T +I L + + AI +F E + P+ V YT
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTC 729
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+ +GQ + M G P IV+ NA++ Y+ G ++ + E+
Sbjct: 730 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 789
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P++ +Y LL+ Y + + + ++ I N + P+ ++ ++L+ + +L+ +
Sbjct: 790 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKI-------------------------- 406
KIL+ G++ + + L++ +C G+I
Sbjct: 850 KILKAFICRGVEVDRYTFNMLIS---KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Query: 407 ------------ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
VL +GI + Y I VG+ A + + M KI
Sbjct: 907 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 966
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
+V + ++ K K EA + M+ +KL + +++++ K G ++EA
Sbjct: 967 PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE----DGF 554
+M + G D+V+Y ++ A G M YE DGF
Sbjct: 1027 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1070
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 169/383 (44%), Gaps = 61/383 (15%)
Query: 215 IVIHCLVKLRQYDKAIDI--------------FNSMREKKSECHPDVVSYTSIIHLYSVS 260
I H LV+ R YD A I F ++ C+ + Y +I +Y
Sbjct: 117 ITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLRE 176
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA--------------------------- 293
G I++ F +M G PS+ + NA++G+
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 236
Query: 294 --------AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
A G +++ + +++++G+ P IV+Y ++L+ Y + + + A + + +K
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
+ ++ +YN LI + + +LR+M + I PN V+ TL+ S +GK
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING---FSNEGK 353
Query: 406 IETVLSAAQMR------GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
VL A+Q+ G+ N V +N+ I +++ G + +AL ++ M K + V+
Sbjct: 354 ---VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
Y +L+ G CK +++ A F M + V + Y+ ++ K G + EA N M
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 520 SSGCSPDVVTYTSMLDAYTAAGK 542
G PD+VTY+++++ + G+
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGR 493
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 182/431 (42%), Gaps = 38/431 (8%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN ++ + + +A LF EM + PD+ TY +LI+ R G+ A+ +
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 714
Query: 132 -LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
R + P++ Y ++ +G WK + ++M + G PD+VT N ++ + +
Sbjct: 715 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 774
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI-----DIFNSMREKKSECHP 245
K M + P+ TT NI++H K + + I N + K CH
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834
Query: 246 DVVSYTSI-------------------IHLYSVSGQIENCEA------AFNM---MLAEG 277
V+ + Y+ + I C A AF++ M + G
Sbjct: 835 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 894
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
I + +A+V + +E+ +V +E+ + G P+ Y L+N R + A
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
V E + +K+ P V+ +A++ A G D+A +LR M + + P + S TL+ C
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 1014
Query: 398 GRCSQKGKIETVLSAAQMR--GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
C IE + M G+KL+ V+YN I G+ A LY+ M+ A
Sbjct: 1015 --CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072
Query: 456 DSVTYTILISG 466
++ TY LI G
Sbjct: 1073 NATTYKALIRG 1083
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 40/236 (16%)
Query: 34 RKNFPFLIKELTQRGSIEHCNLVFQWMK--NQRNYCARNDIYNMMIRLHARHNRIDQARG 91
R F LI + G I N F +K D + M+ + R++R ++R
Sbjct: 864 RYTFNMLISKCCANGEI---NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 92 LFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM-------------------- 131
+ EM + P++ Y LIN R G + A + ++M
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980
Query: 132 ---------------LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
L+ + P+ +++ L++ C +GN EAL + M++ G+ DLV
Sbjct: 981 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
++N+L++ + + A +E MKG + TT +I L+ DI
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1096
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 235/472 (49%), Gaps = 2/472 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I + ++ +A G+ ++ KPD TY L+ + ++ + +MD+ML
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
PS + ++L+ G +EALN+ K++ D GV P+L +N L+ + G ++
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A F+ M +RP+ T +I+I + + D A+ M + + V Y S
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD--TGLKLSVYPYNS 442
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I+ + G I E M+ + ++P++V+Y +L+G Y + G +AL +++E+ G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P I ++T+LL+ R+ + A +F + +KPN V+YN +I+ Y G + A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+ L+EM + GI P+ S L+ Q + + + +LN + Y + +
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ ++AL + + M ++ + D V Y +LI GS K ++EM L
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+Y+S++ A SK G EA ++LM + GC P+ VTYT++++ AG +N
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 216/480 (45%), Gaps = 13/480 (2%)
Query: 70 NDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIM 128
ND+ Y+++I + R ++D A EM + K YN+LIN H + G A M
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 129 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
+M+ + P+ TY +L+ S G +AL + +MT G+ P + T LLS
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
A+ F M +++P+ T N++I + KA + M EK PD
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG--IVPDTY 578
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
SY +IH ++GQ + + + + + + Y L+ + G +EAL V E+
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
Q G D+V Y L++ + + + G+ + + LKP+ V Y ++IDA G
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+A I M +G PN V+ ++ + + E + S Q N V Y
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY--- 755
Query: 429 IGSYLNV---GEYD--KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
G +L++ GE D KA+ L+ ++ K + A++ TY +LI G C+ + EA + M
Sbjct: 756 -GCFLDILTKGEVDMQKAVELHNAILKGLL-ANTATYNMLIRGFCRQGRIEEASELITRM 813
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ + Y++++ ++ + +A +N M G PD V Y +++ AG+M
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 204/454 (44%), Gaps = 2/454 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN +I H + I A G EM + +P TY +L+ + G+ A+ + +M
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I PS T+ L++ +G ++A+ + +M + V P+ VT+N+++ + S
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
KA + + M I PDT + +IH L Q +A + + K C + + YT
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH--KGNCELNEICYTG 617
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++H + G++E + M+ G+ +V Y L+ H K + E+ G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
+PD V YTS+++A ++ ++A G+++++ PN V+Y A+I+ G +++A
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+ +M+ PN V+ L + + L A ++G+ NT YN I +
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G ++A L M + D +TYT +I+ C+ + +A+ M + +
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
Y++++ G++ +A N M G P+
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 215/499 (43%), Gaps = 36/499 (7%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCK--PDAETYNALINAHGRAGQWRWAMNIMDD 130
++++I+ + R R+ L F+M + P+ T +AL++ + + AM + +D
Sbjct: 159 FDLLIQHYVRSRRVLDGV-LVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
M+ I P Y +I + + A + M G ++V +N+L+ +
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM-------------- 236
+A+ + + G ++PD T +++ L K+++++ +++ + M
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 237 -------REKKSEC------------HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
R K E P++ Y ++I + E F+ M G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
++P+ V+Y+ L+ + G AL E+ G + + Y SL+N + + A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
G + KL+P +V+Y +L+ Y S G ++ A+++ EM GI P++ + TLL+
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
R + + +K N V YN I Y G+ KA K M +K I D+
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
+Y LI G C + EA F++ + +++ Y+ +L + ++G++ EA S
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 518 MKSSGCSPDVVTYTSMLDA 536
M G D+V Y ++D
Sbjct: 638 MVQRGVDLDLVCYGVLIDG 656
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/533 (22%), Positives = 221/533 (41%), Gaps = 77/533 (14%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARND--IYNMMIRLHARHNRIDQARGLFFEMQ 97
L++ L +RG IE +K ++ + +YN +I + + +A LF M
Sbjct: 338 LVEGLRKRGKIEE---ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
+ +P+ TY+ LI+ R G+ A++ + +M+ + S YN+LIN G+
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
A +M + + P +VT+ L+ + S + +KAL + M G I P T ++
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
L + A+ +FN M E
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWN------------------------------------- 537
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+KP+ V+YN ++ Y G +A E+ + G PD SY L++ + + +A+
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+ + + + N + Y L+ + G L++A+ + +EM Q G+ ++V L+
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ + +L RG+K + V Y S I + G++ +A G++ M + +
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 458 VTYTILISGSCKMSKYGEAL-------------------SFMEEMMHLKLPVSKEV---- 494
VTYT +I+G CK EA F++ + ++ + K V
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 495 ------------YSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
Y+ ++ + +QG+I EA M G SPD +TYT+M++
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 168/382 (43%), Gaps = 45/382 (11%)
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
P+ TL+ ++H LVK R + A+++FN M PDV YT +I + +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDM--VSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
M A G +IV YN L+ EA+ + ++ +PD+V+Y +L+
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 328 GRSQK-----------------PQKA-----------RGVFE----MIKRN---KLKPNL 352
+ Q+ P +A RG E ++KR + PNL
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS- 411
YNALID+ +A + M + G++PN V+ L+ R +GK++T LS
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR---RGKLDTALSF 424
Query: 412 AAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
+M G+KL+ YNS I + G+ A G M KK++ VTYT L+ G C
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
K +AL EM + S ++++L + G I +A FN M P+ VT
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 530 YTSMLDAYTAAGKMN--FEPLK 549
Y M++ Y G M+ FE LK
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLK 566
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 169/380 (44%), Gaps = 6/380 (1%)
Query: 82 RHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS 141
R I A LF EM EW KP+ TYN +I + G A + +M I P
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
+Y LI+ +G EA + + + + LL F + +ALS + M
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
+ D ++I +K + + M ++ + PD V YTS+I S +G
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK--PDDVIYTSMIDAKSKTG 696
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+ +++M+ EG P+ V+Y A++ G EA ++ ++++ P+ V+Y
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 322 SLLNAYGRSQ-KPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
L+ + + QKA + I + L N +YN LI + G +++A +++ M
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILKGLL-ANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 381 DGIQPNVVSICTLL-AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
DG+ P+ ++ T++ C R K IE S + +GI+ + VAYN+ I GE
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE-KGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 440 KALGLYKSMRKKKIKADSVT 459
KA L M ++ + ++ T
Sbjct: 875 KATELRNEMLRQGLIPNNKT 894
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 162/389 (41%), Gaps = 44/389 (11%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
F L+ L + G I +F M + N YN+MI + + +A E
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
M E PD +Y LI+ GQ A +D + + + Y L++ G
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH---IRPDTTT 212
+EAL+VC++M GV DLV + +L+ S + L +F L+K H ++PD
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDG--SLKHKDRKL-FFGLLKEMHDRGLKPDDVI 684
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
+I K + +A I++ M + C P+ V+YT++I+ +G + E +
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEG--CVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 273 M-----------------------------------LAEGIKPSIVSYNALVGAYAAHGM 297
M + +G+ + +YN L+ + G
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 298 GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNA 357
+EA + + +G PD ++YT+++N R +KA ++ + ++P+ V+YN
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 358 LIDAYGSNGLLDDAIKILREMEQDGIQPN 386
LI G + A ++ EM + G+ PN
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 112/233 (48%), Gaps = 1/233 (0%)
Query: 320 YTSLLNAYGRSQKPQKARGVFEM-IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+ L+ Y RS++ VF+M I + L P + + +AL+ A+++ +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
GI+P+V ++ + + + +++ + G +N V YN I +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 439 DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSI 498
+A+G+ K + K +K D VTY L+ G CK+ ++ L M+EM+ L+ S+ SS+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
+ K+G+I EA + + G SP++ Y +++D+ K + L ++
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD 391
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 254/557 (45%), Gaps = 45/557 (8%)
Query: 3 WTVSEVAEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKN 62
+ V + ++ SL I L+ + + + +F + KE RG + +F++M+
Sbjct: 74 YDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQR 133
Query: 63 QRNYCARND-IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
Q +C N+ IY +MI L R +D+ +F EM +Y ALINA+GR G++
Sbjct: 134 QI-WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRY 192
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG-NWKEALNVCKKMTDNGVGPDLVTHNI 180
++ ++D M I PS TYN +INAC G +W+ L + +M G+ PD+VT+N
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
LLSA +A F M I PD TT + ++ KLR+ +K D+ M
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
S PD+ SY ++ Y+ SG I+ F+ M A G P+ +Y+ L+ + G +
Sbjct: 313 S--LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
+F E+K + PD +Y L+ +G ++ +F + ++P++ +Y +I
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 430
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
A G GL +DA KIL+ M + I P
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVP----------------------------------- 455
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM 480
++ AY I ++ Y++AL + +M + T+ L+ + E+ + +
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 481 EEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
++ +P +++ +++ + AY + G+ EA T+ M+ S C PD T ++L Y+ A
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 541 G-----KMNFEPLKYED 552
+ FE +K D
Sbjct: 576 RLVDECREQFEEMKASD 592
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 186/393 (47%), Gaps = 8/393 (2%)
Query: 47 RGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAE 106
RG + +VF+ M N Y+ ++ + R+++ L EM PD
Sbjct: 260 RGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
+YN L+ A+ ++G + AM + M A P+ +TY+ L+N G SG + + + +M
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
+ PD T+NIL+ F G + + ++ F M +I PD T +I K +
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
+ A I M ++ P +YT +I + + E AFN M G PSI +++
Sbjct: 439 EDARKILQYM--TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
+L+ ++A G+ KE+ + + + +G + ++ + + AY + K ++A + ++++
Sbjct: 497 SLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
+ P+ + A++ Y L+D+ + EM+ I P+++ C +LA G+ + +
Sbjct: 557 RCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDV 616
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+L +M +++ + + IG + G+YD
Sbjct: 617 NELLE--EMLSNRVSNI--HQVIGQMIK-GDYD 644
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 157/387 (40%), Gaps = 37/387 (9%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARN-DIYNMMIRLHARHNRIDQARGLFF 94
++ L++ + GSI+ VF M Q C N + Y++++ L + R D R LF
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQM--QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 154
EM+ PDA TYN LI G G ++ + + DM+ I P TY +I ACG G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
++A + + MT N + P + ++ AF + Y +AL F M P T +
Sbjct: 437 LHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFH 496
Query: 215 IVIHCLVK-----------LRQYDKAI----DIFNSMRE------------------KKS 241
+++ + R D I D FN+ E +KS
Sbjct: 497 SLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556
Query: 242 ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEA 301
C PD + +++ +YS + ++ C F M A I PSI+ Y ++ Y +
Sbjct: 557 RCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDV 616
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNA-YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
+ E+ N ++ Y Q V + + + YNAL+D
Sbjct: 617 NELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLD 676
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNV 387
A G + A ++L E + G+ P +
Sbjct: 677 ALWWLGQKERAARVLNEATKRGLFPEL 703
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 131/359 (36%), Gaps = 74/359 (20%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
+ L+ Q G + +F MK+ N YN++I + + LF +M
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
E +PD ETY +I A G+ G A I+ M I PS Y +I A G + +
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 157 KEAL-----------------------------------NVCKKMTDNGVGPDLVTHNIL 181
+EAL + ++ D+G+ + T N
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS 241
+ A+K G ++ +A+ + M+ + PD TL V+ R D+ + F M K S
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM--KAS 591
Query: 242 ECHPDVVSYTSIIHLYS---------------VSGQIENCEAAFNMML------------ 274
+ P ++ Y ++ +Y +S ++ N M+
Sbjct: 592 DILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQI 651
Query: 275 ---------AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
+EG I YNAL+ A G + A V NE + G P++ L+
Sbjct: 652 VEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 235/492 (47%), Gaps = 10/492 (2%)
Query: 54 NLVFQWMKNQRNYCARNDIYNM--MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNAL 111
+LV + K +D+Y M MI + R ++ A + + +PD T++ L
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 112 INAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV 171
+N G+ A+ ++D M+ P T + LIN G EAL + +M + G
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
PD VT+ +L+ + AL F M+ +I+ +IVI L K +D A+
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+FN M K DVV+Y+S+I G+ ++ M+ I P +V+++AL+
Sbjct: 267 LFNEMEMKG--IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
+ G EA ++NE+ G PD ++Y SL++ + + +A +F+++ +P+
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
+V+Y+ LI++Y +DD +++ RE+ G+ PN ++ TL+ G C Q GK+
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL--GFC-QSGKLNAAKE 441
Query: 412 AAQ---MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
Q RG+ + V Y + + GE +KAL +++ M+K ++ Y I+I G C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
SK +A S + + Y+ ++ K+G + EA+ F MK GC+PD
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561
Query: 529 TYTSMLDAYTAA 540
TY ++ A+
Sbjct: 562 TYNILIRAHLGG 573
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 202/421 (47%), Gaps = 2/421 (0%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A+++ + M+++ P+ +N L +A + + L CK M NG+ D+ T I+++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
+ + A S PDT T + +++ + +A+ + + M E K
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-- 171
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
PD+V+ +++I+ + G++ + M+ G +P V+Y ++ G AL
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+F ++++ + +V Y+ ++++ + A +F ++ +K ++V+Y++LI
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
++G DD K+LREM I P+VV+ L+ + + + + + + RGI +T+
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
YNS I + +A ++ M K + D VTY+ILI+ CK + + + E+
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
L + Y++++ + + G++ A+ F M S G P VVTY +LD G++
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 544 N 544
N
Sbjct: 472 N 472
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
L+ Q G + +FQ M + R Y +++ + +++A +F +MQ+
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
R YN +I+ A + A ++ + + P TYN +I G+ EA
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ +KM ++G PD T+NIL+ A GS ++ E MK D++T+ +VI
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Query: 220 LVKLRQYDKA 229
L R+ DK+
Sbjct: 605 LSD-RRLDKS 613
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 10/201 (4%)
Query: 351 NLVSYNALIDAYGS------NGLLD----DAIKILREMEQDGIQPNVVSICTLLAACGRC 400
+L+ Y+++ +A S NG++D DAI + M Q P + L +A R
Sbjct: 24 SLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVART 83
Query: 401 SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
Q + ++ GI+ + I Y + A + K + D++T+
Sbjct: 84 KQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITF 143
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
+ L++G C + EA++ ++ M+ +K S+++ +G++ EA + M
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 521 SGCSPDVVTYTSMLDAYTAAG 541
G PD VTY +L+ +G
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSG 224
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/526 (23%), Positives = 251/526 (47%), Gaps = 7/526 (1%)
Query: 21 IDGLLNRWVGRFARKNFPFLI---KELTQRGSIEHCNLVFQWMKNQRNYCARNDIY--NM 75
+D +N + + FP ++ K L+ + +LV + +N +++Y ++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
+I R +++ A + +M + +PD T N+L+N + A++++ M+
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
P T+N LI+ EA+ + +M G PDLVT+ I+++ AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
S + M+ I P N +I L + + A+++F M K P+VV+Y S+I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG--IRPNVVTYNSLIR 299
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
G+ + + M+ I P++V+++AL+ A+ G EA +++E+ + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
DI +Y+SL+N + + +A+ +FE++ PN+V+YN LI + +D+ +++
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
REM Q G+ N V+ TL+ + + + V G+ + + Y+ + N
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
G+ + AL +++ +++ K++ D TY I+I G CK K + + + + Y
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 496 SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++++ + ++G EA++ F MK G PD TY +++ A+ G
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 226/462 (48%), Gaps = 8/462 (1%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
++D A LF +M + R P ++ L++A + ++ +++ + M I + TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
LIN AL V KM G PD+VT N LL+ F G++ S A+S M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
+PD+ T N +IH L + + +A+ + + M K C PD+V+Y +++ G I+
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG--CQPDLVTYGIVVNGLCKRGDID 238
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
+ M I+P +V YN ++ A + +AL +F E+ G RP++V+Y SL+
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 325 NA---YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
YGR +R + +MI+R K+ PN+V+++ALIDA+ G L +A K+ EM +
Sbjct: 299 RCLCNYGRWS--DASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
I P++ + +L+ + + + + + N V YN+ I + D+
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
+ L++ M ++ + ++VTYT LI G + + A ++M+ + YS +L
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
G++ A F ++ S PD+ TY M++ AGK+
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 212/440 (48%), Gaps = 8/440 (1%)
Query: 84 NRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTY 143
NRI A L +M E +PD+ T+N LI+ R + A+ ++D M+ P TY
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
++N G+ AL++ KKM + P +V +N ++ A + + AL+ F M
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI 263
IRP+ T N +I CL ++ A + + M E+K +P+VV+++++I + G++
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKL 342
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
E ++ M+ I P I +Y++L+ + H EA +F + P++V+Y +L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
+ + ++++ + +F + + L N V+Y LI + D+A + ++M DG+
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 384 QPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
P++++ LL G C+ GK+ET V Q ++ + YN I G+ +
Sbjct: 463 LPDIMTYSILLD--GLCNN-GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
L+ S+ K +K + VTYT ++SG C+ EA + EM Y++++
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 501 AYSKQGQIVEAESTFNLMKS 520
A+ + G + M+S
Sbjct: 580 AHLRDGDKAASAELIREMRS 599
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 202/428 (47%), Gaps = 2/428 (0%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A+N+ DM+++ PS ++ L++A + +++ ++M + G+ +L T++IL++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
F SQ S AL+ M PD TLN +++ + A+ + M E +
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ- 183
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
PD ++ ++IH + A + M+ +G +P +V+Y +V G AL
Sbjct: 184 -PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+ +++Q P +V Y ++++A + A +F + ++PN+V+YN+LI
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
+ G DA ++L +M + I PNVV+ L+ A + + + E + R I +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
Y+S I + D+A +++ M K + VTY LI G CK + E + EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
L + Y++++ + + + A+ F M S G PD++TY+ +LD GK+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 544 NFEPLKYE 551
+ +E
Sbjct: 483 ETALVVFE 490
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 188/374 (50%), Gaps = 9/374 (2%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IYN +I + ++ A LF EM +P+ TYN+LI G+W A ++ DM
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I P+ T++ LI+A G EA + +M + PD+ T++ L++ F +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A FELM P+ T N +I K ++ D+ +++F M ++ + V+YT
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG--LVGNTVTYT 435
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++IH + + + +N + F M+++G+ P I++Y+ L+ +G + AL+VF ++++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
PDI +Y ++ ++ K + +F + +KPN+V+Y ++ + GL ++A
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+ REM+++G P+ + TL+ A R K ++ +MR + V S IG
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR--EMRSCRF--VGDASTIGL 611
Query: 432 YLNV---GEYDKAL 442
N+ G DK+
Sbjct: 612 VTNMLHDGRLDKSF 625
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 199/420 (47%), Gaps = 33/420 (7%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N +I RHNR +A L M C+PD TY ++N + G A++++ M
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ I P YN +I+A + N +ALN+ +M + G+ P++VT+N L+ + ++S
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKL-------RQYDKAI------DIF------ 233
A M I P+ T + +I VK + YD+ I DIF
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 234 ------NSMREKK--------SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
+ + E K +C P+VV+Y ++I + + +++ F M G+
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
+ V+Y L+ + A +VF ++ +G PDI++Y+ LL+ + K + A V
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
FE ++R+K++P++ +YN +I+ G ++D + + G++PNVV+ T+++ R
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
K + + + + G ++ YN+ I ++L G+ + L + MR + D+ T
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%)
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNS 427
LDDA+ + +M + P++V LL+A + ++ + ++ Q GI N Y+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK 487
I + + AL + M K + D VT L++G C ++ +A+S + +M+ +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 488 LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNF 545
+++++ + + EA + + M GC PD+VTY +++ G ++
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LIK + ++ +F+ M +QR Y +I + D A+ +F +M
Sbjct: 402 LIKGFCKAKRVDEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
PD TY+ L++ G+ A+ + + + R+ + P TYN +I +G ++
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
++ ++ GV P++VT+ ++S F +A + F MK PD+ T N +I
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR- 579
Query: 220 LVKLRQYDKA 229
LR DKA
Sbjct: 580 -AHLRDGDKA 588
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%)
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
LN + D A+ L+ M K + V ++ L+S KM+K+ +S E+M +L + +
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
YS ++ + ++ Q+ A + M G PD+VT S+L+ + +++
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 242/525 (46%), Gaps = 46/525 (8%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+F MK+ R Y + IYN++I + R++ A LF EM R P TYN LI+ +
Sbjct: 201 LFNRMKHDRIYPSVF-IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
+AG + + + M I PS T+N L+ +G ++A NV K+M D G PD
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI--- 232
T +IL + S + AL +E + ++ + T +I+++ L K + +KA +I
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR 379
Query: 233 ------------FNSMRE------------------KKSECHPDVVSYTSIIHLYSVSGQ 262
+N+M + +K PD ++Y +I + G+
Sbjct: 380 EMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGE 439
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
+EN E N M +G+ PS+ +YN L+G Y + + E++ NG P++VSY +
Sbjct: 440 MENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGT 499
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
L+N + K +A+ V ++ + P + YN LID S G ++DA + +EM + G
Sbjct: 500 LINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
I+ N+V+ TL+ + + E +L +G+K + YNS I Y G + +
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM-HLKLPVSKEVYSSILCA 501
LY+ M++ IK TY +LIS K E + E + + L VY+ +L
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLISLCTK-----EGIELTERLFGEMSLKPDLLVYNGVLHC 674
Query: 502 YSKQGQIVEAESTFNLMK---SSGCSPDVVTYTSMLDAYTAAGKM 543
Y+ G + E FNL K D TY S++ GK+
Sbjct: 675 YAVHGDM---EKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 716
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 221/492 (44%), Gaps = 7/492 (1%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
F L+K L + G +E V + MK+ + ++++ ++ + + + A G++
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDL-GFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
+ K +A T + L+NA + G+ A I+ + + P+ YN +I+ G+
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
A + M G+ PD + +N L+ F + A MK + P T NI
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
+I + ++DK DI M + + P+VVSY ++I+ ++ + M
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGT--MPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
G+ P + YN L+ + G ++A E+ + G ++V+Y +L++ + K +
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A + I R LKP++ +YN+LI YG G + I + EM++ GI+P + + L++
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
C K IE +K + + YN + Y G+ +KA L K M +K I
Sbjct: 643 LC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
D TY LI G K+ K E S ++EM ++ + Y+ I+ + + + A +
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWY 758
Query: 516 NLMKSSGCSPDV 527
M+ G DV
Sbjct: 759 REMQEKGFLLDV 770
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 206/491 (41%), Gaps = 37/491 (7%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 145
I +A LFF ++ P +++ L++ + Q+R +N+ ++L + PS+ Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
I A + + L + +M + + P + +N+L+ G + + A F+ M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
+ P T N +I K +K+ + M K P ++++ +++ +G +E+
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERM--KADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
E M G P +++ L Y+++ + AL V+ +G + + + + LLN
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
A + K +KA + L PN V YN +ID Y G L A + ME+ G++P
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 386 NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
+ ++ L+ + E ++ +++G+ + YN IG Y E+DK +
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 446 KSMRKKKIKADSVT-----------------------------------YTILISGSCKM 470
K M + V+ Y +LI G C
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
K +A F +EM+ + ++ Y++++ S G++ EAE + G PDV TY
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 531 TSMLDAYTAAG 541
S++ Y AG
Sbjct: 603 NSLISGYGFAG 613
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 208/479 (43%), Gaps = 47/479 (9%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQE 98
L+ L + G IE + + + IYN MI + R + AR M++
Sbjct: 359 ILLNALCKEGKIEKAEEIL-GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 158
KPD YN LI G+ A ++ M + PS TYN LI G + +
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
++ K+M DNG P++V++ L++ GS+ +A M+ + P N++I
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
+ + A M +K E + +V+Y ++I S++G++ E + +G+
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELN--LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
KP + +YN+L+ Y G + + ++ E+K++G +P + +Y L++ + R
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERL 655
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
EM LKP+L+ YN ++ Y +G ++ A +
Sbjct: 656 FGEM----SLKPDLLVYNGVLHCYAVHGDMEKAFNL------------------------ 687
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
QK IE + I L+ YNS I L VG+ + L M ++++ ++
Sbjct: 688 ---QKQMIE--------KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMH----LKLPVSKEVYSSILCAY-SKQGQIVEAE 512
TY I++ G C++ Y A + EM L + + E+ S + + SK+ +IV +E
Sbjct: 737 TYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISE 795
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 127/303 (41%)
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
SY + L + S I F + EGI PS S L+ + + VF I
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
++ FRP Y + A + K +F +K +++ P++ YN LID +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+DA ++ EM + P++++ TL+ + K V + I+ + + +N+
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
+ G + A + K M+ D+ T++IL G K AL E + +
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPL 548
++ S +L A K+G+I +AE + G P+ V Y +M+D Y G + +
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 549 KYE 551
K E
Sbjct: 411 KIE 413
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 224/469 (47%), Gaps = 2/469 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN+MI R +++ A + +M + P T N+L+N + A+ ++D M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T+ L++ EA+ + ++M G PDLVT+ +++ +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
AL+ M+ I D + VI L K R D A+++F M K PDV +Y+S
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG--IRPDVFTYSS 280
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G+ + + ML I P++V++N+L+ A+A G EA +F+E+ Q
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P+IV+Y SL+N + + +A+ +F ++ P++V+YN LI+ + + D +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ R+M + G+ N V+ TL+ + S + V G+ N + YN+ +
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ +KA+ +++ ++K K++ D TY I+ G CK K + + +
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
Y++++ + K+G EA + F MK G PD TY +++ A+ G
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 232/464 (50%), Gaps = 8/464 (1%)
Query: 83 HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 142
H ++D+A LF EM + R P ++ L++A + ++ ++ + M + + T
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
YN +IN AL + KM G GP +VT N LL+ F G++ S+A++ + M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
+PDT T ++H L + + +A+ + M K C PD+V+Y ++I+ G+
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGE 220
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
+ N M I+ +V Y+ ++ + + +AL +F E+ G RPD+ +Y+S
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 323 LLNA---YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
L++ YGR +R + +M++R K+ PN+V++N+LIDA+ G L +A K+ EM
Sbjct: 281 LISCLCNYGRWS--DASRLLSDMLER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
Q I PN+V+ +L+ + + + + + + + V YN+ I + +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
+ L++ M ++ + ++VTYT LI G + S A ++M+ + + Y+++L
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
K G++ +A F ++ S PD+ TY M + AGK+
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 210/405 (51%), Gaps = 8/405 (1%)
Query: 82 RHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS 141
+HN+ +A L M C+PD TY A+IN + G+ A+N+++ M + I
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
Y+ +I++ + +ALN+ +M + G+ PD+ T++ L+S + ++S A M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
I P+ T N +I K + +A +F+ M ++ + P++V+Y S+I+ + +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID--PNIVTYNSLINGFCMHD 359
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+++ + F +M+++ P +V+YN L+ + + + +F ++ + G + V+YT
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+L++ + ++ A+ VF+ + + + PN+++YN L+D NG L+ A+ + +++
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
++P++ + + + G C + GK+E + + ++G+K + +AYN+ I + G
Sbjct: 480 KMEPDIYTYNIM--SEGMC-KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 439 DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
++A L+ M++ DS TY LI + + ++EM
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 171/325 (52%), Gaps = 2/325 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IY+ +I ++ +D A LF EM +PD TY++LI+ G+W A ++ DM
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
L I P+ T+N+LI+A G EA + +M + P++VT+N L++ F +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A F LM PD T N +I+ K ++ +++F M + + V+YT
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG--LVGNTVTYT 419
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++IH + + +N + F M+++G+ P+I++YN L+ +G ++A++VF ++++
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
PDI +Y + ++ K + +F + +KP++++YN +I + GL ++A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 372 IKILREMEQDGIQPNVVSICTLLAA 396
+ +M++DG P+ + TL+ A
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 219/462 (47%), Gaps = 7/462 (1%)
Query: 90 RGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINA 149
RG++F + + + NAL++ + A+++ +M+++ PS ++ L++A
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSA 74
Query: 150 CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPD 209
+ ++ +KM GV +L T+NI+++ SQ S AL+ M P
Sbjct: 75 IAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPS 134
Query: 210 TTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAA 269
TLN +++ + +A+ + + M E + PD V++T+++H + A
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ--PDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 270 FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
M+ +G +P +V+Y A++ G AL + N++++ D+V Y++++++ +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 330 SQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
+ A +F + ++P++ +Y++LI + G DA ++L +M + I PNVV+
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 390 ICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR 449
+L+ A + + + E + R I N V YNS I + D+A ++ M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 450 KKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIV 509
K D VTY LI+G CK K + + +M L + Y++++ + +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 510 EAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
A+ F M S G P+++TY ++LD GK+ + +E
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 3/297 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N +I A+ ++ +A LF EM + P+ TYN+LIN + A I M+
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P TYN LIN + + + + + M+ G+ + VT+ L+ F S
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A F+ M + P+ T N ++ L K + +KA+ +F +++ K E PD+ +Y
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME--PDIYTYNI 490
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+ +G++E+ F + +G+KP +++YN ++ + G+ +EA +F ++K++G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
PD +Y +L+ A+ R + + + ++ + + +Y + D +G LD
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLD 606
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 62 NQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
++R Y +I + + D A+ +F +M P+ TYN L++ + G+
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
AM + + + ++ + P TYN + +G ++ ++ ++ GV PD++ +N +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
+S F +A + F MK PD+ T N +I LR DKA
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR--AHLRDGDKA 572
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI Q ++ +VF+ M + + YN ++ ++ ++++A +F +Q+
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVH-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
+ +PD TYN + +AG+ ++ + + P YN +I+ G +EA
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ KM ++G PD T+N L+ A + + + M+ D +T +V
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Query: 220 L 220
L
Sbjct: 600 L 600
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 253/505 (50%), Gaps = 17/505 (3%)
Query: 41 IKELTQRGSIEHCNLVFQWMKNQRNYCARNDIY--NMMIRLHARHNRIDQARGLFFEMQE 98
++++ + G +E F++++N + DI +IR R + +A + ++
Sbjct: 109 LRQMVRTGELEEG---FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 158
PD TYN +I+ + +AG+ A++++D R ++ P TYN ++ + SG K+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
A+ V +M PD++T+ IL+ A S A+ + M+ PD T N++++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
+ K + D+AI N M S C P+V+++ I+ +G+ + E ML +G
Sbjct: 283 GICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
PS+V++N L+ G+ A+ + ++ Q+G +P+ +SY LL+ + + +K +A
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
E + P++V+YN ++ A +G ++DA++IL ++ G P +++ T++
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ + GK +L + + +K +T+ Y+S +G G+ D+A+ + + I+ ++V
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
T+ ++ G CK + A+ F+ M++ ++ Y+ ++ + +G EA N +
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 519 KSSGCSPDVVTYTSMLDAYTAAGKM 543
C+ ++ +S A AGKM
Sbjct: 581 ----CNKGLMKKSS---AEQVAGKM 598
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 214/451 (47%), Gaps = 13/451 (2%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
PD LI R G+ R A I++ + + P TYN +I+ +G AL+V
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
+M+ V PD+VT+N +L + + +A+ + M PD T I+I +
Sbjct: 195 LDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
A+ + + MR++ C PDVV+Y +++ G+++ N M + G +P++
Sbjct: 252 DSGVGHAMKLLDEMRDRG--CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
+++N ++ + + G +A + ++ + GF P +V++ L+N R +A + E
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+ ++ +PN +SYN L+ + +D AI+ L M G P++V+ T+L A +
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA---LCK 426
Query: 403 KGKIE---TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
GK+E +L+ +G + YN+ I G+ KA+ L MR K +K D++T
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
Y+ L+ G + K EA+ F E + + + ++SI+ K Q A M
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 520 SSGCSPDVVTYTSMLD--AYTAAGKMNFEPL 548
+ GC P+ +YT +++ AY K E L
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 188/423 (44%), Gaps = 34/423 (8%)
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
NN + +G +E + M +G PD++ L+ F + KA E+++G
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM--------------------------- 236
+ PD T N++I K + + A+ + + M
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 237 ---REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
R + +C+PDV++YT +I + + + M G P +V+YN LV
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 294 AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLV 353
G EA+ N++ +G +P+++++ +L + + + A + + R P++V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA 413
++N LI+ GLL AI IL +M Q G QPN +S LL G C +K +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH--GFCKEKKMDRAIEYLE 403
Query: 414 QM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
+M RG + V YN+ + + G+ + A+ + + K +TY +I G K
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYT 531
K G+A+ ++EM L YSS++ S++G++ EA F+ + G P+ VT+
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 532 SML 534
S++
Sbjct: 524 SIM 526
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 244/502 (48%), Gaps = 11/502 (2%)
Query: 56 VFQWMKNQRNYCARN-DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
VF + + RN C +++ + + +++A F +M+ +R P + N L++
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD 174
+ G+ DM+ A P+ TYN +I+ G+ + A + ++M G+ PD
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
VT+N ++ F + + +FE MK PD T N +I+C K + ++ +
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYR 356
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
M K + P+VVSY++++ + G ++ + M G+ P+ +Y +L+ A
Sbjct: 357 EM--KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
G +A + NE+ Q G ++V+YT+L++ +++ ++A +F + + PNL S
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE---TVLS 411
YNALI + +D A+++L E++ GI+P+++ T + G CS + KIE V++
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW--GLCSLE-KIEAAKVVMN 531
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
+ GIK N++ Y + + +Y G + L L M++ I+ VT+ +LI G CK
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 472 KYGEALSFMEEMMH-LKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
+A+ + + + L + ++++++ K Q+ A + F M G PD Y
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Query: 531 TSMLDAYTAAGKMNFEPLKYED 552
TS++D G + E L D
Sbjct: 652 TSLMDGNFKQGNV-LEALALRD 672
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 222/472 (47%), Gaps = 7/472 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN+MI + ++ ARGLF EM+ PD TYN++I+ G+ G+ + ++M
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P TYN LIN G L ++M NG+ P++V+++ L+ AF
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A+ ++ M+ + P+ T +I K+ A + N M + E + VV+YT+
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN--VVTYTA 442
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + +++ E F M G+ P++ SYNAL+ + AL + NE+K G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
+PD++ Y + + +K + A+ V +K +K N + Y L+DAY +G + +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQK---GKIETVLSAAQMRGIKLNTVAYNSAI 429
+L EM++ I+ VV+ C L+ G C K ++ + G++ N + + I
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLID--GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
+ + A L++ M +K + D YT L+ G+ K EAL+ ++M + +
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+ Y+S++ S Q+ +A S M G PD V S+L + G
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 732
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 217/514 (42%), Gaps = 46/514 (8%)
Query: 19 DDIDGLLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNM 75
DD+ +G AR + +I + + G +E +F+ MK R YN
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK-FRGLVPDTVTYNS 302
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALIN---------------------- 113
MI + R+D F EM++ C+PD TYNALIN
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 114 -------------AHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 160
A + G + A+ DM R + P+ TY +LI+A GN +A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 161 NVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
+ +M GV ++VT+ L+ + +A F M + P+ + N +IH
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
VK + D+A+++ N ++ + + PD++ Y + I +IE + N M GIK
Sbjct: 483 VKAKNMDRALELLNELKGRGIK--PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
+ + Y L+ AY G E L + +E+K+ +V++ L++ +++ KA F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 341 EMIKRN-KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
I + L+ N + A+ID + ++ A + +M Q G+ P+ + +L+ G
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD--GN 658
Query: 400 CSQKGKIETVLSAAQMR--GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
Q +E + +M G+KL+ +AY S + + + KA + M + I D
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
V ++ ++ EA+ +M +L S
Sbjct: 719 VLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 153/318 (48%), Gaps = 8/318 (2%)
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
D+F+ + ++ C P + ++ + G +E F+ M + P S N L+
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
+A G + F ++ G RP + +Y +++ + + ARG+FE +K L P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK-GKIETV 409
+ V+YN++ID +G G LDD + EM+ +P+V++ L+ C K GK+
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI----NCFCKFGKLPIG 351
Query: 410 LS---AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
L + G+K N V+Y++ + ++ G +A+ Y MR+ + + TYT LI
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
+CK+ +A EM+ + + + Y++++ ++ EAE F M ++G P+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 527 VVTYTSMLDAYTAAGKMN 544
+ +Y +++ + A M+
Sbjct: 472 LASYNALIHGFVKAKNMD 489
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 250/508 (49%), Gaps = 10/508 (1%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQ 97
F+ + L RG+ L F + + +R + + Y ++R +D A GLF M
Sbjct: 12 FVHRSLVVRGNAATFPLSFSFCR-RRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMA 70
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
+ R P ++ L++A + ++ ++ + M I + TYN LIN
Sbjct: 71 QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLS 130
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
AL + KM G PD+VT N LL+ F G++ S A++ + M +PDT T +I
Sbjct: 131 LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
H L + +A+ + + M ++ C PD+V+Y ++++ G + N M A
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRG--CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA---YGRSQKPQ 334
I+ ++V Y+ ++ + + +AL +F E++ G RP++++Y+SL++ YGR
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS--D 306
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
+R + +MI+R K+ PNLV+++ALIDA+ G L A K+ EM + I PN+ + +L+
Sbjct: 307 ASRLLSDMIER-KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 395 AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
+ G+ + +L + N V YN+ I + DK + L++ M ++ +
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
++VTYT LI G + A ++M+ + + + Y+ +L K G++ +A
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
F ++ S PD+ TY M++ AGK
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 193/401 (48%), Gaps = 2/401 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I R +R+ A L +M + +PD T N+L+N + A+ ++D M+
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T+ LI+ EA+ + +M G PDLVT+ +++
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
AL+ M+ I + + VI L K R D A+++F M K P+V++Y+S
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG--VRPNVITYSS 293
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G+ + + M+ I P++V+++AL+ A+ G +A ++ E+ +
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P+I +Y+SL+N + + +A+ + E++ R PN+V+YN LI+ + +D +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ REM Q G+ N V+ TL+ + + V G+ N + YN +
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
G+ KA+ +++ +++ ++ D TY I+I G CK K+
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 175/372 (47%), Gaps = 37/372 (9%)
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
P ++ + LLSA +++ +S+ E M+ I + T NI+I+C + + A+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
M + E PD+V+ S+++ + +I + A + M+ G KP V++ L+
Sbjct: 136 LGKMMKLGYE--PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL 193
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
H EA+ + + + Q G +PD+V+Y +++N + A + ++ K++ N+
Sbjct: 194 FLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANV 253
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
V Y+ +ID+ DDA+ + EME G++PNV++ +L++ + +LS
Sbjct: 254 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD 313
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
R I N V +++ I +++ G+ KA LY+ M K+ I + TY+ LI+G C + +
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
G EA+ LM C P+VVTY +
Sbjct: 374 LG-----------------------------------EAKQMLELMIRKDCLPNVVTYNT 398
Query: 533 MLDAYTAAGKMN 544
+++ + A +++
Sbjct: 399 LINGFCKAKRVD 410
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 140/284 (49%), Gaps = 4/284 (1%)
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV-FNE-IKQNGFRPDIVS 319
++++ F +M PSI+ ++ L+ A A M K L++ F E ++ G ++ +
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAK--MNKFDLVISFGEKMEILGISHNLYT 115
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
Y L+N + R + A + + + +P++V+ N+L++ + + DA+ ++ +M
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+ G +P+ V+ TL+ ++ + ++ RG + + V Y + + G+ D
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
AL L M KI+A+ V Y+ +I CK +AL+ EM + + + YSS++
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
G+ +A + M +P++VT+++++DA+ GK+
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 64 RNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
R C N + YN +I + R+D+ LF EM + + TY LI+ +A
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
A + M+ + P+ TYN L++ +G +A+ V + + + + PD+ T+NI++
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 183 SAFKSGSQYSKALSYF 198
++ YF
Sbjct: 506 EGMCKAGKWKMGGIYF 521
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 228/472 (48%), Gaps = 5/472 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++R + ++A LF M E R P + L+N + ++ +N+ D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ T N L+N S A + KM G PD+VT L++ F G++
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A+S M I+PD +I L K + A+ +F+ M + PDVV YTS
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM--ENYGIRPDVVMYTS 217
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+++ SG+ + ++ M IKP ++++NAL+ A+ G +A ++NE+ +
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P+I +YTSL+N + +AR +F +++ P++V+Y +LI+ + +DDA+
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
KI EM Q G+ N ++ TL+ G+ + + V S RG+ N YN +
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 433 LNVGEYDKALGLYKSMRKKK---IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
G+ KAL +++ M+K++ + + TY +L+ G C K +AL E+M ++
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+ Y+ I+ K G++ A + F + S G P+VVTYT+M+ G
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 216/455 (47%), Gaps = 5/455 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+ ++ + A+ + D L +Q D T N L+N ++ Q A + + M+
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P T+ +LIN +EA+++ +M + G+ PD+V + ++ + +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
ALS F+ M+ IRPD +++ L ++ A + M ++K + PDV+++ +
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK--PDVITFNA 252
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + G+ + E +N M+ I P+I +Y +L+ + G EA +F ++ G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PD+V+YTSL+N + + +K A +F + + L N ++Y LI +G G + A
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 373 KILREMEQDGIQPNVVSICTLLAAC---GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
++ M G+ PN+ + LL G+ + I + +M G+ N YN +
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
G+ +KAL +++ MRK+++ +TYTI+I G CK K A++ + +
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
+ Y++++ ++G EA F MK G S
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 201/438 (45%), Gaps = 44/438 (10%)
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
Q+ A+++ M+ + PS + L+N + +N+C + GV DL T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
+L++ F SQ A S+ M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMM------------------------------------- 134
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
K PD+V++TS+I+ + + ++E + N M+ GIKP +V Y ++ + +G
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
AL +F++++ G RPD+V YTSL+N S + + A + + + K+KP+++++NALI
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET--VLSAAQMRG 417
DA+ G DA ++ EM + I PN+ + +L+ G C + E + + +G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN--GFCMEGCVDEARQMFYLMETKG 312
Query: 418 IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEAL 477
+ VAY S I + + D A+ ++ M +K + +++TYT LI G ++ K A
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 478 SFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS---SGCSPDVVTYTSML 534
M+ +P + Y+ +L G++ +A F M+ G +P++ TY +L
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 535 DAYTAAGKMNFEPLKYED 552
GK+ + +ED
Sbjct: 433 HGLCYNGKLEKALMVFED 450
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 177/350 (50%), Gaps = 5/350 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+Y +I ++ ++ A LF +M+ + +PD Y +L+N +G+WR A +++ M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I P T+N LI+A G + +A + +M + P++ T+ L++ F
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A F LM+ PD +I+ K ++ D A+ IF M +K + ++YT
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT--GNTITYT 356
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ- 310
++I + G+ + F+ M++ G+ P+I +YN L+ +G K+AL++F ++++
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 311 --NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
+G P+I +Y LL+ + K +KA VFE +++ ++ +++Y +I G +
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
+A+ + + G++PNVV+ T+++ R K + + + G+
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 258/558 (46%), Gaps = 43/558 (7%)
Query: 25 LNRWVG-----RFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRL 79
L W G R + + LI +L G + + + MK++ + ++ ++R
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDE-GIVFKESLFISIMRD 155
Query: 80 HARHNRIDQARGLFFEMQE-WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPP 138
+ + Q L EM+ + C+P ++YN ++ + A N+ DML IPP
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 139 SRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF 198
+ T+ ++ A + AL++ + MT +G P+ V + L+ + ++ ++AL
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 199 ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK-------------KSECH- 244
E M PD T N VI L K + ++A + N M + C
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 245 ---------------PDVVSYTSIIHLYSVSGQIENCEAAF-NMMLAEGIKPSIVSYNAL 288
P++V + ++IH + G++++ +A +M+ + GI P + +YN+L
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+ Y G+ AL V ++++ G +P++ SYT L++ + + K +A V + + L
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET 408
KPN V +N LI A+ + +A++I REM + G +P+V + +L++ +
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 409 VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
+L G+ NTV YN+ I ++L GE +A L M + D +TY LI G C
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 469 KMSKYGEALSFMEEMM---HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
+ + +A S E+M+ H +S + + LC + G + EA M G +P
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC---RSGMVEEAVEFQKEMVLRGSTP 632
Query: 526 DVVTYTSMLDAYTAAGKM 543
D+VT+ S+++ AG++
Sbjct: 633 DIVTFNSLINGLCRAGRI 650
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 218/469 (46%), Gaps = 5/469 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+ ++++ N ID A L +M + C P++ Y LI++ + + A+ ++++M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T+N++I EA + +M G PD +T+ L++ +
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A F + +P+ N +IH V + D A + + M PDV +Y S
Sbjct: 340 AAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG-IVPDVCTYNS 394
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I+ Y G + + M +G KP++ SY LV + G EA V NE+ +G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
+P+ V + L++A+ + + +A +F + R KP++ ++N+LI + A+
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+LR+M +G+ N V+ TL+ A R + + +++ +G L+ + YNS I
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
GE DKA L++ M + +++ ILI+G C+ EA+ F +EM+
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++S++ + G+I + + F +++ G PD VT+ +++ G
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 158/349 (45%), Gaps = 34/349 (9%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEM-QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
I+N +I H R+D A+ + +M + PD TYN+LI + + G A+ ++ D
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
M P+ +Y L++ G EA NV +M+ +G+ P+ V N L+SAF +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVI----------HCLVKLRQ------------YDK 228
+A+ F M +PD T N +I H L LR Y+
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 229 AIDIFNSMREKKS----------ECHP-DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
I+ F E K + P D ++Y S+I +G+++ + F ML +G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
PS +S N L+ GM +EA+ E+ G PDIV++ SL+N R+ + +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
+F ++ + P+ V++N L+ G + DA +L E +DG PN
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F LI L + I+H + + M ++ A YN +I R I +AR L EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
D TYN+LI RAG+ A ++ + MLR PS + N LIN SG
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+EA+ K+M G PD+VT N L++ + L+ F ++ I PDT T N +
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 217 IHCLVK 222
+ L K
Sbjct: 676 MSWLCK 681
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/530 (24%), Positives = 230/530 (43%), Gaps = 41/530 (7%)
Query: 18 YDDIDGLLNRWVG---RFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYN 74
+DD+ +L F LI+ Q + V WM ++ YN
Sbjct: 99 FDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYN 158
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 134
M+ L N + +M W KPD T+N LI A RA Q R A+ +++DM
Sbjct: 159 RMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY 218
Query: 135 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKA 194
+ P T+ ++ G+ AL + ++M + G V+ N+++ F + A
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 195 LSYFELMKGTH-IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
L++ + M PD T N +++ L K AI+I + M ++ + PDV +Y S+
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD--PDVYTYNSV 336
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I G+++ + M+ P+ V+YN L+ +EA + + G
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK 373
PD+ ++ SL+ ++ + A +FE ++ +P+ +YN LID+ S G LD+A+
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
+L++ME L+ C R + + YN+ I +
Sbjct: 457 MLKQME--------------LSGCAR---------------------SVITYNTLIDGFC 481
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
+ +A ++ M + +SVTY LI G CK + +A M++M+ K
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 494 VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
Y+S+L + + G I +A M S+GC PD+VTY +++ AG++
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 199/436 (45%), Gaps = 4/436 (0%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
P+ Y ++ GR+G + I++DM + ST+ LI + E L+V
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 163 CKKMTDN-GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
M D G+ PD +N +L+ G+ M I+PD +T N++I L
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
+ Q AI + M PD ++T+++ Y G ++ M+ G S
Sbjct: 201 RAHQLRPAILMLEDM--PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIK-QNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
VS N +V + G ++AL E+ Q+GF PD ++ +L+N ++ + A +
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRC 400
+++ + P++ +YN++I G + +A+++L +M PN V+ TL++ +
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE 378
Query: 401 SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
+Q + + +GI + +NS I + A+ L++ MR K + D TY
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
+LI C K EAL+ +++M S Y++++ + K + EAE F+ M+
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 521 SGCSPDVVTYTSMLDA 536
G S + VTY +++D
Sbjct: 499 HGVSRNSVTYNTLIDG 514
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 162/354 (45%), Gaps = 7/354 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQE 98
+I L + G ++ V M + C+ N + YN +I + N++++A L +
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRD--CSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 158
PD T+N+LI R AM + ++M P TYN LI++ S G E
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
ALN+ K+M +G ++T+N L+ F ++ +A F+ M+ + ++ T N +I
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
L K R+ + A + + M + + PD +Y S++ + G I+ M + G
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQK--PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
+P IV+Y L+ G + A + I+ G +Y ++ R +K +A
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 339 VF-EMIKRNKLKPNLVSYNALIDAY-GSNGLLDDAIKILREMEQDGIQPNVVSI 390
+F EM+++N+ P+ VSY + G + +A+ L E+ + G P S+
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSL 685
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 5/369 (1%)
Query: 178 HNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
ILL +SGS + E MK + T+T I+I + D+ + + + M
Sbjct: 87 EEILLRLGRSGS-FDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 238 EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGM 297
++ PD Y +++L ++ E + M GIKP + ++N L+ A
Sbjct: 146 DEFG-LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 298 GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNA 357
+ A+L+ ++ G PD ++T+++ Y A + E + + VS N
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 358 LIDAYGSNGLLDDAIKILREME-QDGIQPNVVSICTLL-AACGRCSQKGKIETVLSAAQM 415
++ + G ++DA+ ++EM QDG P+ + TL+ C K IE ++
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE-IMDVMLQ 323
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
G + YNS I +GE +A+ + M + ++VTY LIS CK ++ E
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
A + + ++S++ A F M+S GC PD TY ++D
Sbjct: 384 ATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 536 AYTAAGKMN 544
+ + GK++
Sbjct: 444 SLCSKGKLD 452
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 116/282 (41%), Gaps = 40/282 (14%)
Query: 301 ALLVFN-EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
AL +FN K+ F P+ Y +L GRS + + E +K ++ + ++ LI
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 360 DAYGSNGLLDDAIKILREMEQD------------------------------------GI 383
++Y L D+ + ++ M + GI
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 384 QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALG 443
+P+V + L+ A R Q +L G+ + + + + Y+ G+ D AL
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 444 LYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK--LPVSKEVYSSILCA 501
+ + M + +V+ +++ G CK + +AL+F++EM + P + +++++
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTLVNG 304
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
K G + A ++M G PDV TY S++ G++
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/545 (24%), Positives = 255/545 (46%), Gaps = 54/545 (9%)
Query: 51 EHCNLVFQWMKNQRNYC-ARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYN 109
E+ +LVF+ ++ + C + + +++++++ ++R + ID+A + Q P +YN
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 110 ALINAHGRAGQ-WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
A+++A R+ + +A N+ +ML + + P+ TYN LI +GN AL + KM
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
G P++VT+N L+ + + M + P+ + N+VI+ L + + +
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 229 AIDIFNSMREK-------------KSECH--------------------PDVVSYTSIIH 255
+ M + K C P V++YTS+IH
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
+G + + M G+ P+ +Y LV ++ G EA V E+ NGF P
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
+V+Y +L+N + + K + A V E +K L P++VSY+ ++ + + +D+A+++
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETV-LSAAQMR-GIKLNTVAYNSAIGSYL 433
REM + GI+P+ ++ +L+ G C Q+ E L +R G+ + Y + I +Y
Sbjct: 474 REMVEKGIKPDTITYSSLIQ--GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
G+ +KAL L+ M +K + D VTY++LI+G K S+ EA + ++ + + S
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591
Query: 494 VYSSIL--CA-------------YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
Y +++ C+ + +G + EA+ F M PD Y M+ +
Sbjct: 592 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Query: 539 AAGKM 543
AG +
Sbjct: 652 RAGDI 656
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 234/494 (47%), Gaps = 20/494 (4%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFE 95
+ LI+ G+I+ +F M+ + C N + YN +I + + +ID L
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKG--CLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
M +P+ +YN +IN R G+ + ++ +M R TYN LI GN
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+ +AL + +M +G+ P ++T+ L+ + ++A+ + + M+ + P+ T
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
++ + ++A + M + P VV+Y ++I+ + V+G++E+ A M
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFS--PSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+G+ P +VSY+ ++ + EAL V E+ + G +PD ++Y+SL+ + ++ ++
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A ++E + R L P+ +Y ALI+AY G L+ A+++ EM + G+ P+VV+ L+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV---------------GEYDK 440
+ S+ + + +L + V Y++ I + N+ G +
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTE 623
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A +++SM K K D Y I+I G C+ +A + +EM+ + +++
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683
Query: 501 AYSKQGQIVEAEST 514
A K+G++ E S
Sbjct: 684 ALHKEGKVNELNSV 697
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 138/264 (52%), Gaps = 7/264 (2%)
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK-ARGVFEMI 343
++ +V +Y+ + +AL + + + +GF P ++SY ++L+A RS++ A VF+ +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
+++ PN+ +YN LI + G +D A+ + +ME G PNVV+ TL+ G C +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID--GYCKLR 254
Query: 404 GKIE---TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
KI+ +L + ++G++ N ++YN I G + + M ++ D VTY
Sbjct: 255 -KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
LI G CK + +AL EM+ L S Y+S++ + K G + A + M+
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 521 SGCSPDVVTYTSMLDAYTAAGKMN 544
G P+ TYT+++D ++ G MN
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMN 397
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 165/400 (41%), Gaps = 53/400 (13%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI + + G++ M+ R C Y ++ ++ +++A + EM +
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMR-VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P TYNALIN H G+ A+ +++DM + P +Y+ +++ S + EA
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
L V ++M + G+ PD +T++ L+ F + +A +E M + PD T +I+
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH------------------LYSVS- 260
+KA+ + N M EK PDVV+Y+ +I+ Y S
Sbjct: 530 YCMEGDLEKALQLHNEMVEKG--VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 261 -------GQIENC------------------------EAAFNMMLAEGIKPSIVSYNALV 289
IENC + F ML + KP +YN ++
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK 349
+ G ++A ++ E+ ++GF V+ +L+ A + K + V + R+
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Query: 350 PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
L++ G +D + +L EM +DG PN +S
Sbjct: 708 SEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 203/405 (50%), Gaps = 4/405 (0%)
Query: 39 FLIKELTQRGSIEHCNLVFQW-MKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQ 97
++I+EL R + +++ +K +R + + + MI R+ ++ A+ +F
Sbjct: 201 YIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAF 260
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG-NW 156
++ALI+A+GR+G A+++ + M + P+ TYN +I+ACG G +
Sbjct: 261 AGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEF 320
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
K+ +M NGV PD +T N LL+ G + A + F+ M I D + N +
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+ + K Q D A +I M K+ P+VVSY+++I ++ +G+ + F M
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKR--IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
GI VSYN L+ Y G +EAL + E+ G + D+V+Y +LL YG+ K +
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
+ VF +KR + PNL++Y+ LID Y GL +A++I RE + G++ +VV L+ A
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
+ G +++ GI N V YNS I ++ D++
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 3/320 (0%)
Query: 226 YDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG-QIENCEAAFNMMLAEGIKPSIVS 284
+++AI +FNSM+E P++V+Y ++I G + + F+ M G++P ++
Sbjct: 284 HEEAISVFNSMKEYG--LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRIT 341
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
+N+L+ + G+ + A +F+E+ D+ SY +LL+A + + A + +
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
++ PN+VSY+ +ID + G D+A+ + EM GI + VS TLL+ + +
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+ +L GIK + V YN+ +G Y G+YD+ ++ M+++ + + +TY+ LI
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
G K Y EA+ E L +YS+++ A K G + A S + M G S
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGIS 581
Query: 525 PDVVTYTSMLDAYTAAGKMN 544
P+VVTY S++DA+ + M+
Sbjct: 582 PNVVTYNSIIDAFGRSATMD 601
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 225/469 (47%), Gaps = 2/469 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I R +++ A + +M + +PD T ++L+N + + A+ ++D M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P+ T+N LI+ EA+ + +M G PDL T+ +++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
ALS + M+ I D +I L + + A+++F M K P+VV+Y S
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG--IRPNVVTYNS 295
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G+ + + M+ I P++V+++AL+ A+ G EA +++E+ +
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PDI +Y+SL+N + + +A+ +FE++ PN+V+YN LI + +++ +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ REM Q G+ N V+ TL+ + + + G+ + + Y+ +
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ +KAL +++ ++K K++ D TY I+I G CK K + + + +
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+Y++++ + ++G EA++ F MK G P+ TY +++ A G
Sbjct: 536 IIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 230/472 (48%), Gaps = 8/472 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N ++ A+ N+ D L MQ R D +YN LIN R Q A+ ++ M+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P T ++L+N EA+ + +M P+ VT N L+ ++ S
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A++ + M +PD T V++ L K D A+ + M + K E DVV YT+
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE--ADVVIYTT 260
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
II + + F M +GI+P++V+YN+L+ +G +A + +++ +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
P++V++++L++A+ + K +A ++ EMIKR+ + P++ +Y++LI+ + + LD+A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEA 379
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM--RGIKLNTVAYNSAI 429
+ M PNVV+ TL+ G C K E + +M RG+ NTV YN+ I
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIK--GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
G+ D A ++K M + D +TY+IL+ G CK K +AL E + K+
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
Y+ ++ K G++ + F + G P+V+ YT+M+ + G
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 214/454 (47%), Gaps = 8/454 (1%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINA---HGRAGQWRWAMNIMDDMLRAAIPPSRS 141
RI +A L +M +P+ T+N LI+ H +A + A+ ++D M+ P
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE---AVALIDRMVARGCQPDLF 221
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
TY ++N G+ AL++ KKM + D+V + ++ A + + AL+ F M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
IRP+ T N +I CL ++ A + + M E+K +P+VV+++++I + G
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFVKEG 339
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
++ E ++ M+ I P I +Y++L+ + H EA +F + P++V+Y
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+L+ + ++++ ++ +F + + L N V+YN LI G D A KI ++M D
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
G+ P++++ LL + + K V Q ++ + YN I G+ +
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
L+ S+ K +K + + YT +ISG C+ EA + EM + Y++++ A
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
+ G + M+S G D T + +++
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 186/379 (49%), Gaps = 10/379 (2%)
Query: 23 GLLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARND--IYNMMI 77
L++R V R + + + ++ L +RG I+ L +K D IY +I
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDID---LALSLLKKMEKGKIEADVVIYTTII 262
Query: 78 RLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP 137
+ ++ A LF EM +P+ TYN+LI G+W A ++ DM+ I
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 138 PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSY 197
P+ T++ LI+A G EA + +M + PD+ T++ L++ F + +A
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
FELM P+ T N +I K ++ ++ +++F M ++ + V+Y ++I
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG--LVGNTVTYNTLIQGL 440
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
+G + + F M+++G+ P I++Y+ L+ +G ++AL+VF ++++ PDI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
+Y ++ ++ K + +F + +KPN++ Y +I + GL ++A + RE
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 378 MEQDGIQPNVVSICTLLAA 396
M++DG PN + TL+ A
Sbjct: 561 MKEDGTLPNSGTYNTLIRA 579
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 200/420 (47%), Gaps = 2/420 (0%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A+++ +M+++ PS +N L++A + +++ ++M + + DL ++NIL++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
F SQ AL+ M PD TL+ +++ ++ +A+ + + M E
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF--VMEY 181
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
P+ V++ ++IH + + A + M+A G +P + +Y +V G AL
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+ ++++ D+V YT++++A + A +F + ++PN+V+YN+LI
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
+ G DA ++L +M + I PNVV+ L+ A + + + E + R I +
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
Y+S I + D+A +++ M K + VTY LI G CK + E + EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
L + Y++++ + G A+ F M S G PD++TY+ +LD GK+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
+S N L+D LDDA+ + EM Q P++V LL+A + ++ + ++
Sbjct: 51 LSRNVLLDLK-----LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
Q I + +YN I + + AL + M K + D VT + L++G C +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
EA++ +++M ++ + +++++ + EA + + M + GC PD+ TY +
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 533 MLDAYTAAGKMNF 545
+++ G ++
Sbjct: 226 VVNGLCKRGDIDL 238
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LIK + +E +F+ M +QR YN +I+ + D A+ +F +M
Sbjct: 401 LIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
PD TY+ L++ + G+ A+ + + + ++ + P TYN +I +G ++
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
++ ++ GV P+++ + ++S F +A + F MK P++ T N +I
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR- 578
Query: 220 LVKLRQYDKA 229
+LR DKA
Sbjct: 579 -ARLRDGDKA 587
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 88/183 (48%), Gaps = 5/183 (2%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQ 97
LI+ L Q G + +F+ M + DI Y++++ ++ ++++A +F +Q
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDG---VPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
+ + +PD TYN +I +AG+ ++ + + P+ Y +I+ G +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
EA + ++M ++G P+ T+N L+ A + + + M+ D +T+++VI
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Query: 218 HCL 220
+ L
Sbjct: 613 NML 615
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 219/469 (46%), Gaps = 2/469 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I R ++I A L +M + +P T ++L+N + + A+ ++D M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T+ LI+ EA+ + +M G P+LVT+ ++++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
AL+ M+ I D N +I L K R D A+++F M K P+VV+Y+S
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG--IRPNVVTYSS 300
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G+ + + M+ + I P++V++NAL+ A+ G EA +++++ +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PDI +Y SL+N + + KA+ +FE + P++V+YN LI + + ++D
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ REM G+ + V+ TL+ + V G+ + + Y+ +
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
N G+ +KAL ++ M+K +IK D YT +I G CK K + + + +
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
Y++++ + + EA + MK G P+ TY +++ A+ G
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 239/499 (47%), Gaps = 12/499 (2%)
Query: 49 SIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETY 108
SI+ C + + W R + + + Y ++R ++D A GLF M + R P +
Sbjct: 33 SIDLCGMCY-W---GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEF 88
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
N L++A + ++ +++ + M R I TYN LIN AL + KM
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
G P +VT + LL+ + G + S A++ + M RPDT T +IH L + +
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
A+ + + M ++ C P++V+Y +++ G + N M A I+ +V +N +
Sbjct: 209 AVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN---AYGRSQKPQKARGVFEMIKR 345
+ + + +AL +F E++ G RP++V+Y+SL++ +YGR + + +MI++
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL--LSDMIEK 324
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
K+ PNLV++NALIDA+ G +A K+ +M + I P++ + +L+ + K
Sbjct: 325 -KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
+ + + + V YN+ I + + L++ M + + D+VTYT LI
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 466 GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
G A ++M+ +P YS +L G++ +A F+ M+ S
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 526 DVVTYTSMLDAYTAAGKMN 544
D+ YT+M++ AGK++
Sbjct: 504 DIYIYTTMIEGMCKAGKVD 522
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 232/466 (49%), Gaps = 10/466 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N ++ A+ + D L +MQ TYN LIN R Q A+ ++ M+
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ PS T ++L+N +A+ + +M + G PD +T L+ ++ S
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A++ + M +P+ T +V++ L K D A+++ N M K E DVV + +
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE--ADVVIFNT 265
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
II +++ F M +GI+P++V+Y++L+ ++G +A + +++ +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
P++V++ +L++A+ + K +A ++ +MIKR+ + P++ +YN+L++ + + LD A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS-IDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSA 428
++ M P+VV+ TL+ G C K ++E + RG+ +TV Y +
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIK--GFCKSK-RVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I + G+ D A ++K M + D +TY+IL+ G C K +AL + M ++
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ +Y++++ K G++ + F + G P+VVTY +M+
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 207/426 (48%), Gaps = 13/426 (3%)
Query: 23 GLLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRL 79
L++R V R + N + ++ L +RG + + M+ + A I+N +I
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDS 269
Query: 80 HARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPS 139
++ +D A LF EM+ +P+ TY++LI+ G+W A ++ DM+ I P+
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 140 RSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFE 199
T+N LI+A G + EA + M + PD+ T+N L++ F + KA FE
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
M PD T N +I K ++ + ++F M + D V+YT++I
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG--LVGDTVTYTTLIQGLFH 447
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
G +N + F M+++G+ P I++Y+ L+ +G ++AL VF+ ++++ + DI
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
YT+++ ++ K +F + +KPN+V+YN +I S LL +A +L++M+
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV---G 436
+DG PN + TL+ A R K ++ +MR + V S IG N+ G
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIR--EMRSCRF--VGDASTIGLVANMLHDG 623
Query: 437 EYDKAL 442
DK+
Sbjct: 624 RLDKSF 629
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 201/404 (49%), Gaps = 8/404 (1%)
Query: 83 HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 142
HN+ +A L M + C+P+ TY ++N + G A+N+++ M A I
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
+N +I++ + +ALN+ K+M G+ P++VT++ L+S S ++S A M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
I P+ T N +I VK ++ +A +++ M ++ + PD+ +Y S+++ + + +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID--PDIFTYNSLVNGFCMHDR 380
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
++ + F M+++ P +V+YN L+ + ++ +F E+ G D V+YT+
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
L+ A+ VF+ + + + P++++Y+ L+D +NG L+ A+++ M++
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 383 IQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
I+ ++ T++ G C + GK++ + + ++G+K N V YN+ I +
Sbjct: 501 IKLDIYIYTTMIE--GMC-KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
+A L K M++ +S TY LI + + + EM
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 134/291 (46%)
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
++++ F M+ PSIV +N L+ A A + + ++++ + +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
L+N + R + A + + + +P++V+ ++L++ Y + DA+ ++ +M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
G +P+ ++ TL+ ++ + ++ RG + N V Y + G+ D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
L L M KI+AD V + +I CK +AL+ +EM + + YSS++
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
G+ +A + M +P++VT+ +++DA+ GK Y+D
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 229/497 (46%), Gaps = 37/497 (7%)
Query: 81 ARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR 140
AR + +A+ F E++ +P TYNAL+ G+AG + A++++ +M + P
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
TYN L+ A +G KEA V + MT GV P+ +T+ ++ A+ + +AL F
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
MK P+T T N V+ L K + ++ I + M K + C P+ ++ +++ L
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM--KSNGCSPNRATWNTMLALCGNK 469
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G + F M + G +P ++N L+ AY G +A ++ E+ + GF + +Y
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG------LLDDAIK- 373
+LLNA R + V +K KP SY+ ++ Y G +++ IK
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Query: 374 --------ILREM--------------------EQDGIQPNVVSICTLLAACGRCSQKGK 405
+LR + ++ G +P++V ++L+ R + +
Sbjct: 590 GQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 649
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
E +L + + G+ + V YNS + Y+ GE KA + K++ K ++K D V+Y +I
Sbjct: 650 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
Query: 466 GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
G C+ EA+ + EM + Y++ + Y+ G E E M + C P
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 526 DVVTYTSMLDAYTAAGK 542
+ +T+ ++D Y AGK
Sbjct: 770 NELTFKMVVDGYCRAGK 786
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 227/511 (44%), Gaps = 10/511 (1%)
Query: 34 RKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCA---RNDIYNMMIRLHARHNRIDQAR 90
R + L+K L G E +F+W+ N A + + + +R+ R ++ A
Sbjct: 136 RTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAA 195
Query: 91 GLF--FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 148
L +QE+ D Y +++A+ R G++ A+++ + M P+ TYN +++
Sbjct: 196 KLLDKIPLQEYLL--DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 149 ACGSSG-NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
G G +W++ L V +M G+ D T + +LSA +A +F +K
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
P T T N ++ K Y +A+ + M E + C D V+Y ++ Y +G +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEE--NSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
MM +G+ P+ ++Y ++ AY G EAL +F +K+ G P+ +Y ++L+
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
G+ + + + +K N PN ++N ++ G+ G+ ++ REM+ G +P+
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
+ TL++A GRC + + G YN+ + + G++ +
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
M+ K K +Y++++ K Y + ++ S + ++L A K
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
+ +E F L K G PD+V + SML +T
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFT 642
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 210/414 (50%), Gaps = 8/414 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y +I + + + D+A LF+ M+E C P+ TYNA+++ G+ + + ++ DM
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQY 191
P+R+T+N ++ CG+ G K V ++M G PD T N L+SA+ + GS+
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+ Y E+ + TT N +++ L + + ++ + M+ K + P SY+
Sbjct: 509 DASKMYGEMTRA-GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK--PTETSYS 565
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPS-IVSYNALVGAYAAHGM-GKEALLVFNEIK 309
++ Y+ G E N + I PS ++ L+ + + G E F K
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER--AFTLFK 623
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
++G++PD+V + S+L+ + R+ +A G+ E I+ + L P+LV+YN+L+D Y G
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
A +IL+ +E+ ++P++VS T++ R + +LS RGI+ YN+ +
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
Y +G + + + + M K + + +T+ +++ G C+ KY EA+ F+ ++
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 200/438 (45%), Gaps = 9/438 (2%)
Query: 110 ALINAHGRAGQWRWAMNIMDDML----RAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 165
+L+ +G W A+ + + ++ A+ + G + A + K
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL-R 224
+ D+ + +L A+ +Y KA+ FE MK P T N+++ K+ R
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS 284
+ K + + + MR K + D + ++++ + G + + F + + G +P V+
Sbjct: 261 SWRKILGVLDEMRSKGLKF--DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
YNAL+ + G+ EAL V E+++N D V+Y L+ AY R+ ++A GV EM+
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
+ + PN ++Y +IDAYG G D+A+K+ M++ G PN + +L+ G+ S+
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALG-LYKSMRKKKIKADSVTYTIL 463
++ +L + G N +N+ + N G DK + +++ M+ + D T+ L
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKG-MDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGC 523
IS + +A EM Y+++L A +++G E+ + MKS G
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 524 SPDVVTYTSMLDAYTAAG 541
P +Y+ ML Y G
Sbjct: 558 KPTETSYSLMLQCYAKGG 575
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 218/454 (48%), Gaps = 2/454 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I R ++I A L +M + +P T ++L+N + + A+ ++D M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T+ LI+ EA+ + +M G P+LVT+ ++++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A + M+ I + + VI L K R D A+++F M K P+V++Y+S
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG--VRPNVITYSS 300
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + + + M+ I P++V++NAL+ A+ G EA +++E+ +
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PDI +Y+SL+N + + +A+ +FE++ PN+V+YN LI+ + +D+ +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ REM Q G+ N V+ TL+ + + V G+ N + YN+ +
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ +KA+ +++ +++ K++ TY I+I G CK K + + +
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
+Y++++ + ++G EA++ F M+ G PD
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 245/496 (49%), Gaps = 8/496 (1%)
Query: 49 SIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETY 108
SI+ C + + W R + + + Y ++R ++D A GLF M + R P +
Sbjct: 33 SIDLCGMCY-W---GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEF 88
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
N L++A + ++ +++ + M R I + TYN LIN AL + KM
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
G P +VT + LL+ + G + S A++ + M RPDT T +IH L + +
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
A+ + + M ++ C P++V+Y +++ G I+ N M A I+ ++V Y+ +
Sbjct: 209 AVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK-PQKARGVFEMIKRNK 347
+ + + +AL +F E++ G RP++++Y+SL++ ++ +R + +MI+R K
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-K 325
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE 407
+ PN+V++NALIDA+ G L +A K+ EM + I P++ + +L+ + + +
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
+ + N V YN+ I + D+ + L++ M ++ + ++VTYT LI G
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 468 CKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDV 527
+ A ++M+ + + Y+++L K G++ +A F ++ S P +
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 528 VTYTSMLDAYTAAGKM 543
TY M++ AGK+
Sbjct: 506 YTYNIMIEGMCKAGKV 521
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 202/380 (53%), Gaps = 8/380 (2%)
Query: 83 HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 142
HN+ +A L M + C+P+ TY ++N + G A N+++ M A I +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
Y+ +I++ + +ALN+ +M + GV P+++T++ L+S + ++S A M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
I P+ T N +I VK + +A +++ M ++ + PD+ +Y+S+I+ + + +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDR 380
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
++ + F +M+++ P++V+YN L+ + E + +F E+ Q G + V+YT+
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
L++ + +++ A+ VF+ + + + PN+++YN L+D NG L+ A+ + +++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 383 IQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
++P + + ++ G C + GK+E + + ++G+K + + YN+ I + G +
Sbjct: 501 MEPTIYTYNIMIE--GMC-KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 440 KALGLYKSMRKKKIKADSVT 459
+A L++ MR+ DS T
Sbjct: 558 EADALFRKMREDGPLPDSGT 577
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 187/369 (50%), Gaps = 10/369 (2%)
Query: 23 GLLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQR--NYCARNDIYNMMI 77
L++R V R + N + ++ L +RG I+ L F + A IY+ +I
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID---LAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 78 RLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP 137
++ D A LF EM+ +P+ TY++LI+ +W A ++ DM+ I
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 138 PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSY 197
P+ T+N LI+A G EA + +M + PD+ T++ L++ F + +A
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
FELM P+ T N +I+ K ++ D+ +++F M ++ + V+YT++IH +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG--LVGNTVTYTTLIHGF 445
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
+ +N + F M+++G+ P+I++YN L+ +G ++A++VF ++++ P I
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
+Y ++ ++ K + +F + +KP+++ YN +I + GL ++A + R+
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 378 MEQDGIQPN 386
M +DG P+
Sbjct: 566 MREDGPLPD 574
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 203/428 (47%), Gaps = 2/428 (0%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A+ + M+++ PS +N L++A + +++ +KM G+ +L T+NIL++
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
F SQ S AL+ M P TL+ +++ ++ A+ + + M E
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY-- 186
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
PD +++T++IH + + A + M+ G +P++V+Y +V G A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+ N+++ ++V Y++++++ + + A +F ++ ++PN+++Y++LI
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
+ DA ++L +M + I PNVV+ L+ A + + + E + R I +
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
Y+S I + D+A +++ M K + VTY LI+G CK + E + EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
L + Y++++ + + A+ F M S G P+++TY ++LD GK+
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 544 NFEPLKYE 551
+ +E
Sbjct: 487 EKAMVVFE 494
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI + I+ +F+ M +QR Y +I + D A+ +F +M
Sbjct: 406 LINGFCKAKRIDEGVELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P+ TYN L++ + G+ AM + + + R+ + P+ TYN +I +G ++
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTT 212
++ ++ GV PD++ +N ++S F +A + F M+ PD+ T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 4/185 (2%)
Query: 365 NGL----LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
NGL LDDAI + M + P++ LL+A + + + ++ Q GI
Sbjct: 59 NGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH 118
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM 480
N YN I + + AL L M K + VT + L++G C + +A++ +
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 481 EEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
++M+ + +++++ + EA + + M GC P++VTY +++
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 541 GKMNF 545
G ++
Sbjct: 239 GDIDL 243
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 219/443 (49%), Gaps = 8/443 (1%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
+PD T++ LIN G+ A+ ++D M+ P+ T N L+N +G +A+
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+ +M + G P+ VT+ +L Q + A+ M+ I+ D +I+I L
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K D A ++FN M K + D++ YT++I + +G+ ++ M+ I P
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFK--ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+V+++AL+ + G +EA + E+ Q G PD V+YTSL++ + + + KA + +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
++ PN+ ++N LI+ Y L+DD +++ R+M G+ + V+ TL+ G C
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ--GFC- 433
Query: 402 QKGKIETVLSAAQ---MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ GK+E Q R ++ + V+Y + + GE +KAL +++ + K K++ D
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
Y I+I G C SK +A + + + Y+ ++ K+G + EA+ F M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 519 KSSGCSPDVVTYTSMLDAYTAAG 541
+ G SP+ TY ++ A+ G
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEG 576
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 224/507 (44%), Gaps = 43/507 (8%)
Query: 87 DQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNL 146
D A LF EM R +P ++ L + R Q+ +++ M I + T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 147 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
IN C A + K+ G PD VT + L++ + S+AL + M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
+P TLN +++ L + A+ + + M E + P+ V+Y ++ + SGQ
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVE--TGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
M IK V Y+ ++ G A +FNE++ GF+ DI+ YT+L+
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 327 YGRSQK-PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
+ + + A+ + +MIKR K+ P++V+++ALID + G L +A ++ +EM Q GI P
Sbjct: 292 FCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 386 NVVSICTLLAACGRCSQKGKIETVLS---------------------------------- 411
+ V+ +L+ + +Q K +L
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 412 -AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+RG+ +TV YN+ I + +G+ + A L++ M ++++ D V+Y IL+ G C
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
+ +AL E++ K+ + +Y+ I+ ++ +A F + G PDV TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 531 TSMLDAYTAAGKMNFEPLKY----EDG 553
M+ G ++ L + EDG
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 2/314 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y+++I + +D A LF EM+ K D Y LI AG+W ++ DM+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ I P ++ LI+ G +EA + K+M G+ PD VT+ L+ F +Q
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
KA +LM P+ T NI+I+ K D +++F M + D V+Y +
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG--VVADTVTYNT 427
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + G++E + F M++ ++P IVSY L+ +G ++AL +F +I+++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
DI Y +++ + K A +F + +KP++ +YN +I G L +A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 373 KILREMEQDGIQPN 386
+ R+ME+DG PN
Sbjct: 548 LLFRKMEEDGHSPN 561
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 2/288 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
++ +I + ++ +A L EM + PD TY +LI+ + Q A +++D M+
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P+ T+N LIN + + L + +KM+ GV D VT+N L+ F +
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A F+ M +RPD + I++ L + +KA++IF + + K E D+ Y
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL--DIGIYNI 497
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
IIH + ++++ F + +G+KP + +YN ++G G EA L+F +++++G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
P+ +Y L+ A+ K+ + E IKR + + ++D
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 159/354 (44%), Gaps = 3/354 (0%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
+ +I L + GS+++ +F M+ + + A IY +IR R D L +M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+ + PD ++ALI+ + G+ R A + +M++ I P TY +LI+
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+A ++ M G GP++ T NIL++ + + L F M + DT T N +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
I +L + + A ++F M ++ PD+VSY ++ +G+ E F +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
++ I YN ++ +A +F + G +PD+ +Y ++ + +A
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
+F ++ + PN +YN LI A+ G + K++ E+++ G + ++
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTV 600
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 95/227 (41%)
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
VSY L + K A +F+ + R++ +P L+ ++ L D + + ++
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
ME GI N+ ++ ++ C RC + + + G + +TV +++ I G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
+AL L M + K +T L++G C K +A+ ++ M+ ++ Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+L K GQ A M+ D V Y+ ++D G ++
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 5/197 (2%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQ 97
LI+ + G +E +FQ M ++R R DI Y +++ + ++A +F +++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRR---VRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
+ + + D YN +I+ A + A ++ + + P TYN +I G+
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
EA + +KM ++G P+ T+NIL+ A +K+ E +K D +T+ +V+
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Query: 218 HCLVKLRQYDKAIDIFN 234
L R +D+ +
Sbjct: 605 DMLSDGRLKKSFLDMLS 621
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/526 (23%), Positives = 244/526 (46%), Gaps = 7/526 (1%)
Query: 21 IDGLLNRWVGRFARKNFPFLI---KELTQRGSIEHCNLVFQWMKNQRNYCARNDIY--NM 75
+D ++ + + FP ++ K L+ + LV + + +D+Y ++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
I R +++ A + +M + +PD T ++L+N + + + A+ ++D M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
P T+ LI+ EA+ + +M G PDLVT+ +++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
S + M+ I D N +I L K + D A+++F M K PDV +Y+S+I
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG--IRPDVFTYSSLIS 301
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
G+ + + M+ I P++V+++AL+ A+ G EA +++E+ + P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
DI +Y+SL+N + + +A+ +FE++ PN+V+Y+ LI + +++ +++
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
REM Q G+ N V+ TL+ + + V G+ N + YN +
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
G+ KA+ +++ +++ ++ D TY I+I G CK K + + + + Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 496 SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++++ + ++G EA+S MK G P+ TY +++ A G
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 230/475 (48%), Gaps = 16/475 (3%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
++D A LF +M + R P +N L++A + ++ +++ + M I TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
IN AL V KM G PD+VT + LL+ + + S A++ + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
+PDT T +IH L + +A+ + + M ++ C PD+V+Y ++++ G I+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG--CQPDLVTYGTVVNGLCKRGDID 240
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
+ M I+ +V YN ++ + +AL +F E+ G RPD+ +Y+SL+
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 325 NA---YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+ YGR +R + +MI+R K+ PN+V+++ALIDA+ G L +A K+ EM +
Sbjct: 301 SCLCNYGRWS--DASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
I P++ + +L+ + + + + + N V Y++ I + ++
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
+ L++ M ++ + ++VTYT LI G + A ++M+ + + + Y+ +L
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYEDGFWK 556
K G++ +A F ++ S PD+ TY M++ AGK+ EDG W+
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV-------EDG-WE 524
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 209/453 (46%), Gaps = 8/453 (1%)
Query: 80 HARHNRIDQARGLFFEMQEWRCKPDAETYNALINA---HGRAGQWRWAMNIMDDMLRAAI 136
+ RI A L +M E KPD T+ LI+ H +A + A+ ++D M++
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE---AVALVDQMVQRGC 219
Query: 137 PPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALS 196
P TY ++N G+ AL++ KKM + D+V +N ++ AL+
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 197 YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHL 256
F M IRPD T + +I CL ++ A + + M E+K +P+VV+++++I
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDA 337
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
+ G++ E ++ M+ I P I +Y++L+ + H EA +F + P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 317 IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
+V+Y++L+ + ++++ ++ +F + + L N V+Y LI + D+A + +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 377 EMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
+M G+ PN+++ LL + + K V Q ++ + YN I G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
+ + L+ ++ K + + + Y +ISG C+ EA S +++M + Y+
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 497 SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
+++ A + G + M+S G + D T
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 190/387 (49%), Gaps = 2/387 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++ + ID A L +M++ + + D YN +I+ + A+N+ +M
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I P TY++LI+ + G W +A + M + + P++VT + L+ AF +
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A ++ M I PD T + +I+ + D+A +F M K +C P+VV+Y++
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK--DCFPNVVTYST 403
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + + ++E F M G+ + V+Y L+ + A +VF ++ G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P+I++Y LL+ ++ K KA VFE ++R+ ++P++ +YN +I+ G ++D
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ + G+ PNV++ T+++ R K + +++L + G N+ YN+ I +
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVT 459
L G+ + + L K MR D+ T
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGDAST 610
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 172/386 (44%), Gaps = 38/386 (9%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARND--IYNMMIRLHARHNRIDQARGLFFEMQ 97
++ L +RG I+ L +K D IYN +I ++ +D A LF EM
Sbjct: 229 VVNGLCKRGDID---LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
+PD TY++LI+ G+W A ++ DM+ I P+ T++ LI+A G
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
EA + +M + PD+ T++ L++ F + +A FELM P+ T + +I
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 218 HCLVKLRQYDKAIDIFNSMREK------------------KSEC---------------H 244
K ++ ++ +++F M ++ +C H
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 245 PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV 304
P++++Y ++ +G++ F + ++P I +YN ++ G ++ +
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGS 364
F + G P++++Y ++++ + R ++A + + +K + PN +YN LI A
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Query: 365 NGLLDDAIKILREMEQDGIQPNVVSI 390
+G + + ++++EM G + +I
Sbjct: 586 DGDREASAELIKEMRSCGFAGDASTI 611
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 20/247 (8%)
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
L V ++ G P + S+ +L + + A G + I RN+L +
Sbjct: 12 LFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIK-------- 63
Query: 362 YGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA---QMRGI 418
+DDA+ + +M + P++V LL+A + + K E V+S Q GI
Sbjct: 64 ------VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMN---KFELVISLGEQMQTLGI 114
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
+ Y+ I + + AL + M K + D VT + L++G C + +A++
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
+++M+ + +++++ + EA + + M GC PD+VTY ++++
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 539 AAGKMNF 545
G ++
Sbjct: 235 KRGDIDL 241
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN+++ ++ ++ +A +F +Q +PD TYN +I +AG+ + ++
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA-FKSGSQY 191
+ P+ YN +I+ G+ +EA ++ KKM ++G P+ T+N L+ A + G +
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCL 220
+ A + M+ D +T+ +V + L
Sbjct: 591 ASA-ELIKEMRSCGFAGDASTIGLVTNML 618
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 226/485 (46%), Gaps = 14/485 (2%)
Query: 48 GSIEHCNLVFQWMKNQRNY--CARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDA 105
S+ C F W++ +Y RN ++N+ + + A LF M R P
Sbjct: 34 ASLSLCGFCF-WIRAFSSYRKILRNGLHNL---------QFNDALDLFTRMVHSRPLPSI 83
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 165
+ L++ + ++ +++ + M IPP T N +++ S A K
Sbjct: 84 IDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGK 143
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQ 225
M G PDLVT LL+ + ++ A++ F+ + G +P+ T +I CL K R
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 226 YDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY 285
+ A+++FN M S P+VV+Y +++ G+ + M+ I+P+++++
Sbjct: 204 LNHAVELFNQMGTNGSR--PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
AL+ A+ G EA ++N + Q PD+ +Y SL+N +AR +F +++R
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
N PN V Y LI + + ++D +KI EM Q G+ N ++ L+ +
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
+ V + R + YN + G+ +KAL +++ MRK+++ + VTYTI+I
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 466 GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
G CK+ K +A + + + Y++++ + ++G I EA+S F MK G P
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 526 DVVTY 530
+ Y
Sbjct: 502 NESVY 506
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 217/457 (47%), Gaps = 49/457 (10%)
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
S+Y ++ + + +AL++ +M + P ++ LLS ++Y +S FE
Sbjct: 49 SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
M+ I P T NIV+HC+ Q +A M + E PD+V++TS+++ Y
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE--PDLVTFTSLLNGYCHW 166
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
+IE+ A F+ +L G KP++V+Y L+ + A+ +FN++ NG RP++V+Y
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA------------------- 361
+L+ + A + + + +++PN++++ ALIDA
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 362 ---------YGS-------NGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
YGS GLLD+A ++ ME++G PN V TL+ G C K +
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH--GFCKSK-R 343
Query: 406 IE---TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
+E + +G+ NT+ Y I Y VG D A ++ M ++ D TY +
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 463 LISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
L+ G C K +AL E M ++ ++ Y+ I+ K G++ +A F + S G
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 523 CSPDVVTYTSMLDAYTAAGKMN-----FEPLKYEDGF 554
P+V+TYT+M+ + G ++ F+ +K EDGF
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMK-EDGF 499
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 178/396 (44%), Gaps = 17/396 (4%)
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
W A + +K+ NG+ HN+ Q++ AL F M + P
Sbjct: 44 WIRAFSSYRKILRNGL------HNL---------QFNDALDLFTRMVHSRPLPSIIDFTR 88
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
++ + K+ +YD I +F M+ P + + ++H +S Q M+
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIP--PLLCTCNIVMHCVCLSSQPCRASCFLGKMMK 146
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
G +P +V++ +L+ Y ++A+ +F++I GF+P++V+YT+L+ +++
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A +F + N +PN+V+YNAL+ G DA +LR+M + I+PNV++ L+
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
A + + + + + + + + Y S I G D+A ++ M +
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
+ V YT LI G CK + + + EM + + Y+ ++ Y G+ A+ F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
N M S PD+ TY +LD GK+ + +E
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 216/469 (46%), Gaps = 2/469 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I R ++I A L +M + +P T ++L+N + + A+ ++D M+
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T+ LI+ EA+ + +M G P+LVT+ ++++
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A + M+ I D N +I L K R D A+++F M K P+VV+Y+S
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG--IRPNVVTYSS 225
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G+ + + M+ + I P++V++NAL+ A+ G EA + +++ +
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PDI +Y SL+N + + KA+ +FE + P+L +YN LI + + ++D
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ REM G+ + V+ TL+ + V G+ + + Y+ +
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
N G+ +KAL ++ M+K +IK D YT +I G CK K + + + +
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
Y++++ + + EA + MK G PD TY +++ A+ G
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 207/428 (48%), Gaps = 17/428 (3%)
Query: 23 GLLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARND--IYNMMI 77
L++R V R + N + ++ L +RG I+ L F + D I+N +I
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID---LAFNLLNKMEAAKIEADVVIFNTII 192
Query: 78 RLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP 137
++ +D A LF EM+ +P+ TY++LI+ G+W A ++ DM+ I
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 138 PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSY 197
P+ T+N LI+A G + EA + M + PD+ T+N L++ F + KA
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
FE M PD T N +I K ++ + ++F M + D V+YT++I
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG--LVGDTVTYTTLIQGL 370
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
G +N + F M+++G+ P I++Y+ L+ +G ++AL VF+ ++++ + DI
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
YT+++ ++ K +F + +KPN+V+YN +I S LL +A +L++
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV-- 435
M++DG P+ + TL+ A R K ++ +MR + V S IG N+
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR--EMRSCRF--VGDASTIGLVANMLH 546
Query: 436 -GEYDKAL 442
G DK+
Sbjct: 547 DGRLDKSF 554
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 206/451 (45%), Gaps = 43/451 (9%)
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
M + R P +N L++A + ++ +++ + M R I + TYN LIN
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
AL + KM G P +VT + LL+ + G + S A++ + M RPDT T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
+IH L + +A+ + + M ++ C P++V+Y +++ G I+ N M A
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN---AYGRSQK 332
I+ +V +N ++ + + +AL +F E++ G RP++V+Y+SL++ +YGR
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
+ + +MI++ K+ PNLV++NALIDA+ G +A K+ +M + I P++ +
Sbjct: 239 ASQL--LSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT--- 292
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
YNS I + DKA +++ M K
Sbjct: 293 --------------------------------YNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
D TY LI G CK + + EM H L Y++++ G A+
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
F M S G PD++TY+ +LD GK+
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 198/404 (49%), Gaps = 8/404 (1%)
Query: 83 HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 142
HN+ +A L M + C+P+ TY ++N + G A N+++ M A I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
+N +I++ + +ALN+ K+M G+ P++VT++ L+S S ++S A M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
I P+ T N +I VK ++ +A + + M ++ + PD+ +Y S+I+ + + +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID--PDIFTYNSLINGFCMHDR 305
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
++ + F M+++ P + +YN L+ + ++ +F E+ G D V+YT+
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
L+ A+ VF+ + + + P++++Y+ L+D +NG L+ A+++ M++
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 383 IQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
I+ ++ T++ G C + GK++ + + ++G+K N V YN+ I +
Sbjct: 426 IKLDIYIYTTMIE--GMC-KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
+A L K M++ DS TY LI + + + EM
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 221/462 (47%), Gaps = 3/462 (0%)
Query: 81 ARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR 140
A+ N+ D L +MQ + TY+ IN R Q A+ I+ M++ PS
Sbjct: 86 AKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSI 145
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
T N+L+N EA+ + +M + G PD VT L+ ++ S+A++ E
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
M +PD T VI+ L K + D A+++ N M + K E DVV Y +II
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE--ADVVIYNTIIDGLCKY 263
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
+++ FN M +GIKP + +YN L+ +G +A + +++ + PD+V +
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 321 TSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
+L++A+ + K +A ++ EM+K P++V+YN LI + +++ +++ REM
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
Q G+ N V+ TL+ + + V G+ + + YN + N G +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
AL +++ M+K+ +K D VTYT +I CK K + + + + Y++++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+ ++G EA++ F MK G P+ TY +++ A G
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 227/464 (48%), Gaps = 15/464 (3%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
++D A GLF +M + R P ++ L++A + ++ +++ + M I + TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
IN AL + KM G GP +VT N LL+ F G++ S+A++ + M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
+PDT T ++H L + + +A+ + M K C PD+V+Y ++I+ G+ +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPD 232
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
N M I+ +V YN ++ + +A +FN+++ G +PD+ +Y L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 325 NA---YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM-EQ 380
+ YGR +R + +M+++N + P+LV +NALIDA+ G L +A K+ EM +
Sbjct: 293 SCLCNYGRWS--DASRLLSDMLEKN-INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
P+VV+ TL+ G C K ++E V RG+ NTV Y + I + +
Sbjct: 350 KHCFPDVVAYNTLIK--GFCKYK-RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
D A ++K M + D +TY IL+ G C AL E M + + Y++
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++ A K G++ + F + G P+VVTYT+M+ + G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 247/539 (45%), Gaps = 20/539 (3%)
Query: 8 VAEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLI---KELTQRGSIEHCNLVFQWMKNQR 64
++ +VL DD GL V + FP ++ K L+ + +LV + +
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMV---KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 102
Query: 65 NYCARNDIY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
N +++Y ++ I R +++ A + +M + P T N+L+N +
Sbjct: 103 NLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 162
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
A+ ++D M+ P T+ L++ EA+ + ++M G PDLVT+ ++
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE 242
+ + AL+ M+ I D N +I L K + D A D+FN M K +
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 243 CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEAL 302
PDV +Y +I G+ + + ML + I P +V +NAL+ A+ G EA
Sbjct: 283 --PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 303 LVFNE-IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
+++E +K PD+V+Y +L+ + + ++ ++ VF + + L N V+Y LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 362 YGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGI 418
+ D+A + ++M DG+ P++++ LL G C+ G +ET V Q R +
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD--GLCNN-GNVETALVVFEYMQKRDM 457
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
KL+ V Y + I + G+ + L+ S+ K +K + VTYT ++SG C+ EA +
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY---TSML 534
EM + Y++++ A + G + M+S G + D T+ T+ML
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 180/395 (45%), Gaps = 3/395 (0%)
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
+A+ + M + P +V + LLSA +++ +S E M+ I + T +I I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
+ + Q A+ I M K P +V+ S+++ + +I A + M+ G
Sbjct: 118 NYFCRRSQLSLALAILGKMM--KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+P V++ LV H EA+ + + G +PD+V+Y +++N + +P A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+ +++ K++ ++V YN +ID +DDA + +ME GI+P+V + L++
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK-IKAD 456
+ +LS + I + V +N+ I +++ G+ +A LY M K K D
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
V Y LI G CK + E + EM L + Y++++ + + A+ F
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 517 LMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
M S G PD++TY +LD G + + +E
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 134/284 (47%), Gaps = 4/284 (1%)
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV-FNEIKQN-GFRPDIVS 319
++++ F M+ PSIV ++ L+ A A M K L++ E QN G ++ +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAK--MNKFDLVISLGEQMQNLGISHNLYT 112
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
Y+ +N + R + A + + + P++V+ N+L++ + + +A+ ++ +M
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+ G QP+ V+ TL+ + ++ + ++ ++G + + V Y + I GE D
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
AL L M K KI+AD V Y +I G CK +A +M + Y+ ++
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
G+ +A + M +PD+V + +++DA+ GK+
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 215/465 (46%), Gaps = 3/465 (0%)
Query: 62 NQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
++R Y +D Y M+R R ++D + LFF M + R P ++ L++A + ++
Sbjct: 39 SRRAYSNGSD-YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
+ + + M IP + T N L+N AL+ KM G P +VT L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS 241
L+ F G + AL F+ M G +P+ N +I L K +Q D A+D+ N M +K
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM--EKD 215
Query: 242 ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEA 301
PDVV+Y S+I SG+ + + M I P + ++NAL+ A G EA
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
+ E+ + PDIV+Y+ L+ + +A +F + P++V+Y+ LI+
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 362 YGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLN 421
Y + ++ +K+ EM Q G+ N V+ L+ R + E + G+ N
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 422 TVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFME 481
+ YN + + G+ +KAL + M+K + AD VTY I+I G CK + +A
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 482 EMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
+ L Y++++ K+G EA++ F MK G P+
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 175/371 (47%), Gaps = 2/371 (0%)
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
P + + LLSA +Y + +E M+ I + T NI+++C + Q A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
M + E P +V++ S+++ + ++ + F+ M+ G KP++V YN ++
Sbjct: 139 LGKMIKLGHE--PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
AL + N ++++G PD+V+Y SL++ S + A + + + ++ P++
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
++NALIDA G + +A + EM + + P++V+ L+ S+ + E +
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
+G + V Y+ I Y + + + L+ M ++ + ++VTYTILI G C+ K
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
A M+ + + Y+ +L G+I +A M+ +G D+VTY
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 533 MLDAYTAAGKM 543
++ AG++
Sbjct: 437 IIRGMCKAGEV 447
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 150/324 (46%), Gaps = 2/324 (0%)
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
++ + D ++D+F M + + P + ++ ++ S + + + M GI
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRP--LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH 114
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
++ + N L+ + AL ++ + G P IV++ SLLN + R + A +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRC 400
+ + KPN+V YN +ID + +D+A+ +L ME+DGI P+VV+ +L++
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 401 SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
+ ++S R I + +N+ I + + G +A Y+ M ++ + D VTY
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
++LI G C S+ EA M+ YS ++ Y K ++ F M
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 521 SGCSPDVVTYTSMLDAYTAAGKMN 544
G + VTYT ++ Y AGK+N
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLN 378
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 39/255 (15%)
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
++L +F + Q P I ++ LL+A + +K ++E ++ + NL + N L+
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI- 418
+ + L A+ L +M + G +P++V+ +LL G C + + QM G+
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN--GFCRGDRVYDALYMFDQMVGMG 181
Query: 419 -KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEAL 477
K N V YN+ I + D AL L M K I D VTY LISG C ++ +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 478 SFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAY 537
+ M +E+Y PDV T+ +++DA
Sbjct: 242 RMVSCM------TKREIY-----------------------------PDVFTFNALIDAC 266
Query: 538 TAAGKMNFEPLKYED 552
G+++ YE+
Sbjct: 267 VKEGRVSEAEEFYEE 281
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 217/471 (46%), Gaps = 3/471 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN ++ AR +D+ + ++ EM E + P+ TYN ++N + + G A + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
A + P TY +LI + A V +M G + V + L+ +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A+ F MK P T ++I L + +A+++ M E + P++ +YT
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE--TGIKPNIHTYTV 363
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + E ML +G+ P++++YNAL+ Y GM ++A+ V ++
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P+ +Y L+ Y +S KA GV + K+ P++V+YN+LID +G D A
Sbjct: 424 LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++L M G+ P+ + +++ + + + + + + + +G+ N V Y + I Y
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ D+A + + M K +S+T+ LI G C K EA E+M+ + L +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ ++ K G A S F M SSG PD TYT+ + Y G++
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 240/506 (47%), Gaps = 4/506 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
L+ L + G ++ V+ M + C YN M+ + + +++A ++ E
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDK-VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
PD TY +LI + + A + ++M + Y +LI+ + EA
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+++ KM D+ P + T+ +L+ + + S+AL+ + M+ T I+P+ T ++I
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
L +++KA ++ M EK P+V++Y ++I+ Y G IE+ +M + +
Sbjct: 368 LCSQCKFEKARELLGQMLEKG--LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
P+ +YN L+ Y + K A+ V N++ + PD+V+Y SL++ RS A +
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
++ L P+ +Y ++ID+ + +++A + +EQ G+ PNVV L+ +
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
+ + +L + N++ +N+ I G+ +A L + M K ++ T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
TILI K + A S ++M+ Y++ + Y ++G++++AE M+
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 520 SSGCSPDVVTYTSMLDAYTAAGKMNF 545
+G SPD+ TY+S++ Y G+ NF
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNF 690
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 233/497 (46%), Gaps = 43/497 (8%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQE 98
LI QR ++ VF M + C RN++ Y +I RID+A LF +M++
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKG--CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 158
C P TY LI + + + A+N++ +M I P+ TY LI++ S +++
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
A + +M + G+ P+++T+N L++ + A+ ELM+ + P+T T N +I
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
K KA+ + N M E+K PDVV+Y S+I SG ++ ++M G+
Sbjct: 437 GYCK-SNVHKAMGVLNKMLERK--VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
P +Y +++ + +EA +F+ ++Q G P++V YT+L++ Y ++ K +A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 339 VFE-MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+ E M+ +N L PN +++NALI ++G L +A + +M + G+QP V +
Sbjct: 554 MLEKMLSKNCL-PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST-------- 604
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+T+L I L G++D A ++ M K D+
Sbjct: 605 ---------DTIL------------------IHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
TYT I C+ + +A M +M + YSS++ Y GQ A
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 518 MKSSGCSPDVVTYTSML 534
M+ +GC P T+ S++
Sbjct: 698 MRDTGCEPSQHTFLSLI 714
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 227/524 (43%), Gaps = 59/524 (11%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++I + ++AR L +M E P+ TYNALIN + + G A+++++ M
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 133 RAAIPPSRSTYNNLINA-CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ P+ TYN LI C S N +A+ V KM + V PD+VT+N L+ +
Sbjct: 421 SRKLSPNTRTYNELIKGYCKS--NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A LM + PD T +I L K ++ ++A D+F+S+ +K +P+VV YT
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG--VNPNVVMYT 536
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV------- 304
++I Y +G+++ ML++ P+ +++NAL+ A G KEA L+
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 305 ----------------------------FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
F ++ +G +PD +YT+ + Y R + A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN---VVSICTL 393
+ ++ N + P+L +Y++LI YG G + A +L+ M G +P+ +S+
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 394 LAACGRCSQKGKIETVLSAAQM---------------RGIKLNTVAYNSAIGSYLNVGEY 438
L QKG + + + M + N +Y I VG
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 439 DKALGLYKSM-RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
A ++ M R + I + + L+S CK+ K+ EA +++M+ + E
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++C K+G+ S F + G D + + ++D G
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQG 880
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 200/407 (49%), Gaps = 14/407 (3%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNG---VGPDLVT--HNILLSAFKSGSQYSKALSYFEL 200
+I +C S G+ L++C+KM + + L+ +N LL++ + +
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
M + P+ T N +++ KL ++A + + E + PD +YTS+I Y
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLD--PDFFTYTSLIMGYCQR 266
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
+++ FN M +G + + V+Y L+ EA+ +F ++K + P + +Y
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
T L+ + S++ +A + + ++ +KPN+ +Y LID+ S + A ++L +M +
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM---RGIKLNTVAYNSAIGSYLNVGE 437
G+ PNV++ L+ G C ++G IE + ++ R + NT YN I Y
Sbjct: 387 KGLMPNVITYNALIN--GYC-KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
+ KA+G+ M ++K+ D VTY LI G C+ + A + M L + Y+S
Sbjct: 444 H-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
++ + K ++ EA F+ ++ G +P+VV YT+++D Y AGK++
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 149/367 (40%), Gaps = 56/367 (15%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+Y +I + + ++D+A + +M C P++ T+NALI+ G+ + A + + M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 132 LRAAIPPSRS-----------------------------------TYNNLINACGSSGNW 156
++ + P+ S TY I G
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+A ++ KM +NGV PDL T++ L+ + Q + A + M+ T P T +
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 217 IHCLVKLR------------------QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYS 258
I L++++ ++D +++ M E P+ SY +I
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT--PNAKSYEKLILGIC 771
Query: 259 VSGQIENCEAAFN-MMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
G + E F+ M EGI PS + +NAL+ EA V +++ G P +
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
S L+ + + ++ VF+ + + + +++ +ID G GL++ ++
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNV 891
Query: 378 MEQDGIQ 384
ME++G +
Sbjct: 892 MEKNGCK 898
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 220/452 (48%), Gaps = 2/452 (0%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
D+ + + R +++ A LF +M + R P +N L++A + ++ +++
Sbjct: 51 DLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKK 110
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
M I T+N +IN AL++ KM G PD VT L++ F ++
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
S A+S + M +PD N +I L K ++ + A D F + K P+VV+Y
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG--IRPNVVTY 228
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T++++ S + + + M+ + I P++++Y+AL+ A+ +G EA +F E+ +
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
PDIV+Y+SL+N + +A +F+++ ++VSYN LI+ + ++D
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
+K+ REM Q G+ N V+ TL+ + K + S GI + YN +G
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+ GE +KAL +++ M+K+++ D VTYT +I G CK K EA S + L
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
Y++++ +G + E E+ + MK G
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 188/396 (47%), Gaps = 39/396 (9%)
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
+A+++ M + P +V N LLSA +Y +S + M+ IR D T NIVI
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
+C Q A+ I M + E PD V+ S+++ + ++ + + + M+ G
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYE--PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK-PQKA 336
KP IV+YNA++ + +A F EI++ G RP++V+YT+L+N S + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
R + +MIK+ K+ PN+++Y+AL+DA+ NG + +A ++ EM + I P++V+
Sbjct: 246 RLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT------- 297
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
Y+S I D+A ++ M K AD
Sbjct: 298 ----------------------------YSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
V+Y LI+G CK + + + EM L + Y++++ + + G + +A+ F+
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 517 LMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
M G SPD+ TY +L G++ + +ED
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 198/398 (49%), Gaps = 10/398 (2%)
Query: 69 RNDIY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMN 126
RND+Y N++I ++ A + +M + +PD T +L+N R + A++
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 127 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFK 186
++D M+ P YN +I++ + +A + K++ G+ P++VT+ L++
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+ S++S A M I P+ T + ++ VK + +A ++F M + PD
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM--VRMSIDPD 294
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
+V+Y+S+I+ + +I+ F++M+++G +VSYN L+ + ++ + +F
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
E+ Q G + V+Y +L+ + ++ KA+ F + + P++ +YN L+ NG
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE---TVLSAAQMRGIKLNTV 423
L+ A+ I +M++ + ++V+ T++ G C + GK+E ++ + ++G+K + V
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIR--GMC-KTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
Y + + G + LY M+++ + + T +
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI + +E +F+ M +QR + YN +I+ + +D+A+ F +M +
Sbjct: 336 LINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
PD TYN L+ G+ A+ I +DM + + TY +I +G +EA
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
++ ++ G+ PD+VT+ ++S + + + + MK + + TL+
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/536 (23%), Positives = 241/536 (44%), Gaps = 73/536 (13%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y MI + + NR+D+A +F +++ R P YN +I +G AG++ A ++++
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
PS YN ++ G EAL V ++M + P+L T+NIL+ +
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLD 394
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A + M+ + P+ T+NI++ L K ++ D+A +F M K C PD +++ S
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV--CTPDEITFCS 452
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G++++ + ML + + + Y +L+ + HG ++ ++ ++
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY----------------- 355
PD+ + ++ ++ +P+K R +FE IK + P+ SY
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 356 ------------------NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
N +ID + G ++ A ++L EM+ G +P VV+ +++
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG--------------------- 436
+ + + + A+ + I+LN V Y+S I + VG
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 437 --------------EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
E ++AL ++SM++ K + VTY ILI+G CK+ K+ +A F +E
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
M + S Y++++ +K G I EA + F+ K++G PD Y +M++ +
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/528 (21%), Positives = 237/528 (44%), Gaps = 10/528 (1%)
Query: 20 DIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNL---VFQWMKNQRNYCARNDIYNMM 76
D+ ++ ++ R A + LI + ++ H ++ +FQ M+ + Y ++ +
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFS---AVNHSDMMLTLFQQMQ-ELGYEPTVHLFTTL 209
Query: 77 IRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 136
IR A+ R+D A L EM+ D YN I++ G+ G+ A ++ +
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 137 PPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALS 196
P TY ++I + EA+ + + + N P +N ++ + S ++ +A S
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 197 YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHL 256
E + P N ++ CL K+ + D+A+ +F M K + P++ +Y +I +
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDM 386
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
+G+++ + M G+ P++ + N +V EA +F E+ PD
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 317 IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
+++ SL++ G+ + A V+E + + + N + Y +LI + ++G +D KI +
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 377 EMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
+M P++ + T + + + K + + R + +Y+ I + G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
++ L+ SM+++ D+ Y I+I G CK K +A +EEM + Y
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 497 SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
S++ +K ++ EA F KS +VV Y+S++D + G+++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 205/449 (45%), Gaps = 2/449 (0%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+M+ + ++D+A +F EM C PD T+ +LI+ G+ G+ A + + ML
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
+ + Y +LI + G ++ + K M + PDL N + + K
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
+ FE +K PD + +I+IH L+K ++ ++F SM+E+ C D +Y +
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG--CVLDTRAYNIV 593
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I + G++ M +G +P++V+Y +++ A EA ++F E K
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK 373
++V Y+SL++ +G+ + +A + E + + L PNL ++N+L+DA +++A+
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
+ M++ PN V+ L+ + + K Q +G+K +T++Y + I
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
G +A L+ + DS Y +I G ++ +A S EE LP+ +
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 494 VYSSILCAYSKQGQIVEAESTFNLMKSSG 522
+L K + +A +++ +G
Sbjct: 834 TCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/507 (20%), Positives = 217/507 (42%), Gaps = 38/507 (7%)
Query: 82 RHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS 141
+ N++ + + M++++ +P Y LI A + + M P+
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
+ LI G AL++ +M + + D+V +N+ + +F + A +F +
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
+ ++PD T +I L K + D+A+++F + +K+ P +Y ++I Y +G
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL--EKNRRVPCTYAYNTMIMGYGSAG 322
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+ + + A+G PS+++YN ++ G EAL VF E+K++ P++ +Y
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYN 381
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
L++ R+ K A + + +++ L PN+ + N ++D + LD+A + EM+
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLN------- 434
P+ ++ C+L+ G+ + V + N++ Y S I ++ N
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 435 ----------------------------VGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
GE +K +++ ++ ++ D+ +Y+ILI G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
K E M + Y+ ++ + K G++ +A MK+ G P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 527 VVTYTSMLDAYTAAGKMNFEPLKYEDG 553
VVTY S++D +++ + +E+
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/542 (21%), Positives = 224/542 (41%), Gaps = 73/542 (13%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y +I + N D LF +MQE +P + LI + G+ A++++D+M
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVT--------------- 177
+++ YN I++ G G A ++ NG+ PD VT
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 178 --------------------HNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
+N ++ + S ++ +A S E + P N ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
CL K+ + D+A+ +F M K + P++ +Y +I + +G+++ + M G
Sbjct: 351 TCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+ P++ + N +V EA +F E+ PD +++ SL++ G+ + A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
V+E + + + N + Y +LI + ++G +D KI ++M P++ + T +
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 398 GRCSQKGKIETVLSAAQMR-----------------------------------GIKLNT 422
+ + K + + R G L+T
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
AYN I + G+ +KA L + M+ K + VTY +I G K+ + EA EE
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
++ ++ +YSS++ + K G+I EA + G +P++ T+ S+LDA A +
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 543 MN 544
+N
Sbjct: 708 IN 709
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 157/334 (47%), Gaps = 4/334 (1%)
Query: 211 TTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF 270
T + +V+ C VK + + D+ MR K + P +YT++I +S + F
Sbjct: 135 TCIEMVLGC-VKANKLREGYDVVQMMR--KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
M G +P++ + L+ +A G AL + +E+K + DIV Y ++++G+
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
K A F I+ N LKP+ V+Y ++I LD+A+++ +E++ P +
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 391 CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
T++ G + + ++L + +G + +AYN + +G+ D+AL +++ M K
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-K 370
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
K + TY ILI C+ K A + M L + + ++ K ++ E
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 511 AESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
A + F M C+PD +T+ S++D G+++
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 184/419 (43%), Gaps = 15/419 (3%)
Query: 139 SRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF 198
+R T N++ N +G W + P+ V + + ++A+ YF
Sbjct: 32 NRQTVNDICNVL-ETGPWGPSAENTLSALSFKPQPEFV-----IGVLRRLKDVNRAIEYF 85
Query: 199 E-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
+ T + + N ++ + + R +D I M + P V + ++
Sbjct: 86 RWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEM--SVAGFGPSVNTCIEMVLGC 143
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
+ ++ MM +P+ +Y L+GA++A L +F ++++ G+ P +
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
+T+L+ + + + A + + +K + L ++V YN ID++G G +D A K E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
+E +G++P+ V+ +++ + ++ + + + T AYN+ I Y + G+
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
+D+A L + R K + Y +++ KM K EAL EEM P + Y+
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNI 382
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN-----FEPLKYE 551
++ + G++ A + M+ +G P+V T M+D + K++ FE + Y+
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 1/205 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI + G I+ L+ + + Q+ +N ++ + I++A F M+E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELM-QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
+C P+ TY LIN + ++ A +M + + PS +Y +I+ +GN EA
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ + NG PD +N ++ +G++ A S FE + + T +++
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDT 841
Query: 220 LVKLRQYDKAIDIFNSMREKKSECH 244
L K ++A + +RE H
Sbjct: 842 LHKNDCLEQAAIVGAVLRETGKARH 866
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IY+ +I + RID+A + E+ + P+ T+N+L++A +A + A+ M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
P++ TY LIN + +A ++M G+ P +++ ++S
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
++A + F+ K PD+ N +I L ++A+D F+ E + P
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIE---GLSNGNRAMDAFSLFEETRRRGLP 829
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 220/466 (47%), Gaps = 9/466 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y++ I R +++ A + +M + +PD T ++L+N + + + A+ ++D M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T+ LI+ EA+ + +M G PDLVT+ +++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
AL+ M+ I+ + N +I L K R + A+D+F M K P+VV+Y S
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG--IRPNVVTYNS 298
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I+ G+ + + ML + I P++V++NAL+ A+ G EA + E+ Q
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PD ++Y L+N + + +A+ +F+ + PN+ +YN LI+ + ++D +
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ REM Q G+ N V+ T++ + + V + + + Y+ +
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
+ G+ D AL ++K ++K +++ + Y +I G CK K GEA + L +
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD-----LFCSLSIKP 533
Query: 493 EV--YSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
+V Y++++ + + EA+ F MK G P+ TY +++ A
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 225/485 (46%), Gaps = 40/485 (8%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
++D A LF +M + R P +N L++A + ++ +++ + M I TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
IN AL V KM G PD+VT + LL+ + + S A++ + M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
+PDT T +IH L + +A+ + + M ++ C PD+V+Y ++++ G I+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG--CQPDLVTYGTVVNGLCKRGDID 240
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
N M A IK ++V +N ++ + + + A+ +F E++ G RP++V+Y SL+
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
N + A + + K+ PN+V++NALIDA+ G L +A K+ EM Q I
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 385 PNVVS-------IC----------------------------TLLAACGRCSQKGKIETV 409
P+ ++ C TL+ +C + +
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 410 LSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
RG+ NTV Y + I + G+ D A ++K M ++ D +TY+IL+ G C
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
K AL + + ++ ++ +Y++++ K G++ EA ++L S PDVVT
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVT 537
Query: 530 YTSML 534
Y +M+
Sbjct: 538 YNTMI 542
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 208/432 (48%), Gaps = 35/432 (8%)
Query: 137 PPSRSTYNNLINACGS----------SGNWKE--------------ALNVCKKMTDNGVG 172
PP+ ++ NL CGS SG+++E A+++ M +
Sbjct: 24 PPTVPSFFNL---CGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPF 80
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
P +V N LLSA +++ +S E M+ I D T +I I+C + Q A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
M + E PD+V+ +S+++ Y S +I + A + M+ G KP ++ L+
Sbjct: 141 LAKMMKLGYE--PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
H EA+ + +++ Q G +PD+V+Y +++N + A + ++ ++K N+
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV---SICTLLAACGRCSQKGKIETV 409
V +N +ID+ ++ A+ + EME GI+PNVV S+ L GR S ++
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL--- 315
Query: 410 LSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
LS + I N V +N+ I ++ G+ +A L++ M ++ I D++TY +LI+G C
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
++ EA + M+ + + Y++++ + K ++ + F M G + VT
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 530 YTSMLDAYTAAG 541
YT+++ + AG
Sbjct: 436 YTTIIQGFFQAG 447
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 206/421 (48%), Gaps = 2/421 (0%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A+++ DM+++ PS +N L++A ++ +++ ++M G+ DL T++I ++
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
F SQ S AL+ M PD TL+ +++ ++ A+ + + M E +
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK- 185
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
PD ++T++IH + + A + M+ G +P +V+Y +V G AL
Sbjct: 186 -PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+ N+++ + ++V + +++++ + + + A +F ++ ++PN+V+YN+LI+
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
+ G DA ++L M + I PNVV+ L+ A + + + E + R I +T+
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
YN I + D+A ++K M K + TY LI+G CK + + + EM
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
L + Y++I+ + + G A+ F M S+ D++TY+ +L + GK+
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 544 N 544
+
Sbjct: 485 D 485
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 189/371 (50%), Gaps = 7/371 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
++ L +RG I+ + M+ R A I+N +I ++ ++ A LF EM+
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
+P+ TYN+LIN G+W A ++ +ML I P+ T+N LI+A G EA
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ ++M + PD +T+N+L++ F ++ +A F+ M P+ T N +I+
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
K ++ + +++F M ++ + V+YT+II + +G ++ + F M++ +
Sbjct: 408 FCKCKRVEDGVELFREMSQRG--LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
I++Y+ L+ ++G AL++F ++++ +I Y +++ ++ K +A +
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
F + +KP++V+YN +I S LL +A + R+M++DG PN + TL+ A R
Sbjct: 526 FCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Query: 400 -CSQKGKIETV 409
C + E +
Sbjct: 583 DCDRAASAELI 593
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 145/327 (44%), Gaps = 43/327 (13%)
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
L + + D A+D+F M KS P +V + ++ + + E + M GI
Sbjct: 58 LSDIIKVDDAVDLFGDM--VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
+ +Y+ + + AL V ++ + G+ PDIV+ +SLLN Y S++ A +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
+ + KP+ ++ LI + +A+ ++ +M Q G QP++V+ T++ G
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN--GL 233
Query: 400 CSQKGKIE---TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
C ++G I+ +L+ + IK N V +N+ I S + A+ L+ M K I+ +
Sbjct: 234 C-KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
VTY LI+ C ++ +A + M+ K+
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKI---------------------------- 324
Query: 517 LMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+P+VVT+ +++DA+ GK+
Sbjct: 325 -------NPNVVTFNALIDAFFKEGKL 344
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 103/237 (43%), Gaps = 20/237 (8%)
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G P + S+ +L + + A G + I RN+L + +DDA
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIK--------------VDDA 67
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA---QMRGIKLNTVAYNSA 428
+ + +M + P++V LL+A + + K E V+S Q GI + Y+
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMN---KFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I + + AL + M K + D VT + L++G C + +A++ +++M+ +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNF 545
+++++ + EA + + M GC PD+VTY ++++ G ++
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 216/439 (49%), Gaps = 5/439 (1%)
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
T+N LI+ +G+AG+ A N+ +ML++ +P T+N +I+ CG+ G+ EA ++ KKM
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
+ G+ PD T+NILLS AL Y+ ++ + PDT T V+H L + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
+ + M ++ D S I+ +Y G + +A F + + S +
Sbjct: 427 AEVEAVIAEM--DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS-TTLA 483
Query: 287 ALVGAYAAHGMGKEALLVF-NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
A++ YA G+ EA VF + +G R D++ Y ++ AYG+++ +KA +F+ +K
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
P+ +YN+L L+D+A +IL EM G +P + ++A+ R
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
+ A + G+K N V Y S I + G ++A+ ++ M + ++++ + T LI
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 466 GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
K+ EA ++M + +S+L + G + EAES FN ++ G +
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TC 722
Query: 526 DVVTYTSMLDAYTAAGKMN 544
DV+++ +M+ Y G ++
Sbjct: 723 DVISFATMMYLYKGMGMLD 741
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 246/561 (43%), Gaps = 34/561 (6%)
Query: 14 SLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIY 73
SL DI+ L + K L+KE T+ E VF++ ++ ++Y Y
Sbjct: 92 SLDSSTDIETTLASLCLNLSPKEQTVLLKEQTR---WERVLRVFRFFQSHQSYVPNVIHY 148
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+++R R + D+ R + EM P TY L++ +G+AG + A+ + M +
Sbjct: 149 NIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQ 208
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEA---------------LNVCKKMTDNGVGPDLVTH 178
P T ++ +SG + A L+ NG V
Sbjct: 209 RMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNL 268
Query: 179 NILLSA--FKSGSQ--YSKALSYFELMKGTHIRPD-TTTLNIVIHCLVKLRQYDKAIDIF 233
LS FK G++ K+L + + +P T+T N +I K + + A ++F
Sbjct: 269 KQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLF 328
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
+ M KS D V++ ++IH G + E+ M +GI P +YN L+ +A
Sbjct: 329 SEML--KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHA 386
Query: 294 AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLV 353
G + AL + +I++ G PD V++ ++L+ + + + V + RN ++ +
Sbjct: 387 DAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEH 446
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG---KIETVL 410
S ++ Y + GL+ A + + D V+S TL A ++KG + ETV
Sbjct: 447 SVPVIMQMYVNEGLVVQAKALFERFQLDC----VLSSTTLAAVIDVYAEKGLWVEAETVF 502
Query: 411 SAAQ-MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
+ M G + + + YN I +Y ++KAL L+K M+ + D TY L
Sbjct: 503 YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAG 562
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
+ EA + EM+ + Y++++ +Y + G + +A + M+ +G P+ V
Sbjct: 563 VDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV 622
Query: 530 YTSMLDAYTAAGKMNFEPLKY 550
Y S+++ + +G M E ++Y
Sbjct: 623 YGSLINGFAESG-MVEEAIQY 642
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 210/479 (43%), Gaps = 17/479 (3%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N +I L+ + R++ A LF EM + D T+N +I+ G G A +++ M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I P TYN L++ +G+ + AL +K+ G+ PD VTH +L +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+ + M IR D ++ +++ V +A +F + +C + +
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF---QLDCVLSSTTLAA 484
Query: 253 IIHLYSVSGQIENCEAAF----NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
+I +Y+ G E F NM G + ++ YN ++ AY + ++AL +F +
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNM---SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
K G PD +Y SL +A+ + + + KP +Y A+I +Y GLL
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM---RGIKLNTVAY 425
DA+ + ME+ G++PN V +L+ ++ G +E + +M G++ N +
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLING---FAESGMVEEAIQYFRMMEEHGVQSNHIVL 658
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMH 485
S I +Y VG ++A +Y M+ + D ++S + EA S +
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718
Query: 486 LKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
K +++++ Y G + EA M+ SG D ++ ++ Y A G+++
Sbjct: 719 -KGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLS 776
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 197/440 (44%), Gaps = 68/440 (15%)
Query: 56 VFQWMKNQRNY---CARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALI 112
+F+ MKNQ + C N ++ M+ A + +D+A+ + EM + CKP +TY A+I
Sbjct: 537 LFKGMKNQGTWPDECTYNSLFQML----AGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 113 NAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG 172
++ R G A+++ + M + + P+ Y +LIN SG +EA+ + M ++GV
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
+ + L+ A+ +A ++ MK + PD N ++ L +A I
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
FN++REK + C DV+S+ ++++LY G ++ M G+ S+N ++ Y
Sbjct: 713 FNALREKGT-C--DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACY 769
Query: 293 AAHGMGKEALLVFNE--------------------IKQNGFRPDIVSYTSLLNAYGRSQK 332
AA G E +F+E +K+ G + VS L AY ++
Sbjct: 770 AADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS--QLQTAYNEAKP 827
Query: 333 ---PQKARGVF-------------EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
P +F + + ++ +YNA+I Y ++G +D A+K
Sbjct: 828 LATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYM 887
Query: 377 EMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
M++ G++P++V+ L+ G+ A + G+K + S L G
Sbjct: 888 RMQEKGLEPDIVTQAYLVGIYGK------------AGMVEGVK--------RVHSRLTFG 927
Query: 437 EYDKALGLYKSMRKKKIKAD 456
E + + L+K++R + A+
Sbjct: 928 ELEPSQSLFKAVRDAYVSAN 947
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 212/480 (44%), Gaps = 30/480 (6%)
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIM------ 128
++++++ + QA+ LF Q C + T A+I+ + G W A +
Sbjct: 450 VIMQMYVNEGLVVQAKALFERFQ-LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNM 508
Query: 129 ----DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA 184
+D+L YN +I A G + ++AL++ K M + G PD T+N L
Sbjct: 509 SGQRNDVLE---------YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQM 559
Query: 185 FKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECH 244
+A M + +P T +I V+L A+D++ +M +K+
Sbjct: 560 LAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM--EKTGVK 617
Query: 245 PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV 304
P+ V Y S+I+ ++ SG +E F MM G++ + + +L+ AY+ G +EA V
Sbjct: 618 PNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV 677
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGS 364
++++K + PD+ + S+L+ +A +F + R K +++S+ ++ Y
Sbjct: 678 YDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL-REKGTCDVISFATMMYLYKG 736
Query: 365 NGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI-ETVLSAAQMRGIKLNTV 423
G+LD+AI++ EM + G+ + S ++A Q + E R + L+
Sbjct: 737 MGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWG 796
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSM--RKKKIKADSVTYTILISGSCKMSKYGEALSFME 481
+ + G +A+ ++ K + ++T T+ + M Y AL +
Sbjct: 797 TFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSA----MGLYAYALESCQ 852
Query: 482 EMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
E+ ++P Y++++ YS G I A + M+ G PD+VT ++ Y AG
Sbjct: 853 ELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 205/454 (45%), Gaps = 2/454 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I + RI +A L M+ PD +Y+ ++N + R G+ +++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R + P+ Y ++I EA +M G+ PD V + L+ F
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A +F M I PD T +I ++ +A +F+ M K E PD V++T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE--PDSVTFTE 426
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I+ Y +G +++ N M+ G P++V+Y L+ G A + +E+ + G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
+P+I +Y S++N +S ++A + + L + V+Y L+DAY +G +D A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+IL+EM G+QP +V+ L+ E +L+ +GI N +NS + Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
A +YK M + + D TY L+ G CK EA +EM VS
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
YS ++ + K+ + +EA F+ M+ G + D
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 198/424 (46%), Gaps = 4/424 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y+ ++ + R +D+ L M+ KP++ Y ++I R + A +M+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R I P Y LI+ G+ + A +M + PD++T+ ++S F
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A F M + PD+ T +I+ K A + N M + + C P+VV+YT+
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ--AGCSPNVVTYTT 461
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G +++ + M G++P+I +YN++V G +EA+ + E + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
D V+YT+L++AY +S + KA+ + + + L+P +V++N L++ + +G+L+D
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 373 KILREMEQDGIQPNVVSICTLLAA-CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
K+L M GI PN + +L+ C R + K + RG+ + Y + +
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT-AIYKDMCSRGVGPDGKTYENLVKG 640
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
+ +A L++ M+ K TY++LI G K K+ EA ++M L
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 492 KEVY 495
KE++
Sbjct: 701 KEIF 704
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 8/406 (1%)
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
++YN +I+ G KEA ++ M G PD+++++ +++ + + K E+
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
MK ++P++ +I L ++ + +A + F+ M + PD V YT++I +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM--IRQGILPDTVVYTTLIDGFCKR 364
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G I F M + I P +++Y A++ + G EA +F+E+ G PD V++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
T L+N Y ++ + A V + + PN+V+Y LID G LD A ++L EM +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 381 DGIQPNVV---SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
G+QPN+ SI L G + K+ AA G+ +TV Y + + +Y GE
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA---GLNADTVTYTTLMDAYCKSGE 541
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
DKA + K M K ++ VT+ +L++G C + + M+ + + ++S
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
++ Y + + A + + M S G PD TY +++ + A M
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 175/392 (44%), Gaps = 38/392 (9%)
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQYSKALSYFELMKGTHIRPDTTT 212
G +EA V +KM + G+ + + N+ L+ K + + A+ F + + +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
NIVIH + +L + +A + M K PDV+SY+++++ Y G+++ +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYT--PDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
M +G+KP+ Y +++G EA F+E+ + G PD V YT+L++ + +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
+ A F + + P++++Y A+I + G + +A K+ EM G++P+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD------ 420
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
+V + I Y G A ++ M +
Sbjct: 421 -----------------------------SVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
+ VTYT LI G CK A + EM + L + Y+SI+ K G I EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+++G + D VTYT+++DAY +G+M+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 164/347 (47%), Gaps = 3/347 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI +RG I + F M + R+ Y +I + + +A LF EM
Sbjct: 357 LIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
+PD+ T+ LIN + +AG + A + + M++A P+ TY LI+ G+ A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ +M G+ P++ T+N +++ +A+ + + DT T ++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
K + DKA +I M K + P +V++ +++ + + G +E+ E N MLA+GI
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQ--PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
P+ ++N+LV Y K A ++ ++ G PD +Y +L+ + +++ ++A +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
F+ +K ++ +Y+ LI + +A ++ +M ++G+ +
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++ + + +D+A+ + EM +P T+N L+N G +++ ML
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I P+ +T+N+L+ N K A + K M GVGPD T+ L+
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A F+ MKG +T +++I +K +++ +A ++F+ MR + ++ + S
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 70/166 (42%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N+++ H ++ L M P+A T+N+L+ + + A I DM
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P TY NL+ + N KEA + ++M G + T+++L+ F ++
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
+A F+ M+ + D + K ++ D +D + + E
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 205/454 (45%), Gaps = 2/454 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I + RI +A L M+ PD +Y+ ++N + R G+ +++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R + P+ Y ++I EA +M G+ PD V + L+ F
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A +F M I PD T +I ++ +A +F+ M K E PD V++T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE--PDSVTFTE 426
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I+ Y +G +++ N M+ G P++V+Y L+ G A + +E+ + G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
+P+I +Y S++N +S ++A + + L + V+Y L+DAY +G +D A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+IL+EM G+QP +V+ L+ E +L+ +GI N +NS + Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
A +YK M + + D TY L+ G CK EA +EM VS
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
YS ++ + K+ + +EA F+ M+ G + D
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 198/424 (46%), Gaps = 4/424 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y+ ++ + R +D+ L M+ KP++ Y ++I R + A +M+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R I P Y LI+ G+ + A +M + PD++T+ ++S F
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A F M + PD+ T +I+ K A + N M + + C P+VV+YT+
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ--AGCSPNVVTYTT 461
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G +++ + M G++P+I +YN++V G +EA+ + E + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
D V+YT+L++AY +S + KA+ + + + L+P +V++N L++ + +G+L+D
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 373 KILREMEQDGIQPNVVSICTLLAA-CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
K+L M GI PN + +L+ C R + K + RG+ + Y + +
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT-AIYKDMCSRGVGPDGKTYENLVKG 640
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
+ +A L++ M+ K TY++LI G K K+ EA ++M L
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 492 KEVY 495
KE++
Sbjct: 701 KEIF 704
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 8/406 (1%)
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
++YN +I+ G KEA ++ M G PD+++++ +++ + + K E+
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
MK ++P++ +I L ++ + +A + F+ M + PD V YT++I +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM--IRQGILPDTVVYTTLIDGFCKR 364
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G I F M + I P +++Y A++ + G EA +F+E+ G PD V++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
T L+N Y ++ + A V + + PN+V+Y LID G LD A ++L EM +
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 381 DGIQPNVV---SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
G+QPN+ SI L G + K+ AA G+ +TV Y + + +Y GE
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA---GLNADTVTYTTLMDAYCKSGE 541
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
DKA + K M K ++ VT+ +L++G C + + M+ + + ++S
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
++ Y + + A + + M S G PD TY +++ + A M
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 175/392 (44%), Gaps = 38/392 (9%)
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQYSKALSYFELMKGTHIRPDTTT 212
G +EA V +KM + G+ + + N+ L+ K + + A+ F + + +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
NIVIH + +L + +A + M K PDV+SY+++++ Y G+++ +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYT--PDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
M +G+KP+ Y +++G EA F+E+ + G PD V YT+L++ + +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
+ A F + + P++++Y A+I + G + +A K+ EM G++P+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD------ 420
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
+V + I Y G A ++ M +
Sbjct: 421 -----------------------------SVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
+ VTYT LI G CK A + EM + L + Y+SI+ K G I EA
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+++G + D VTYT+++DAY +G+M+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 164/347 (47%), Gaps = 3/347 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI +RG I + F M + R+ Y +I + + +A LF EM
Sbjct: 357 LIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
+PD+ T+ LIN + +AG + A + + M++A P+ TY LI+ G+ A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ +M G+ P++ T+N +++ +A+ + + DT T ++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
K + DKA +I M K + P +V++ +++ + + G +E+ E N MLA+GI
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQ--PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
P+ ++N+LV Y K A ++ ++ G PD +Y +L+ + +++ ++A +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
F+ +K ++ +Y+ LI + +A ++ +M ++G+ +
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++ + + +D+A+ + EM +P T+N L+N G +++ ML
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I P+ +T+N+L+ N K A + K M GVGPD T+ L+
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A F+ MKG +T +++I +K +++ +A ++F+ MR + ++ + S
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 70/166 (42%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N+++ H ++ L M P+A T+N+L+ + + A I DM
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P TY NL+ + N KEA + ++M G + T+++L+ F ++
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
+A F+ M+ + D + K ++ D +D + + E
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/545 (22%), Positives = 253/545 (46%), Gaps = 41/545 (7%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
+ +++ L++ + H + + + +++Q C D+ +I+ + +++ DQA +F M
Sbjct: 46 YHHILRRLSETRMVNHVSRIVELIRSQECKCDE-DVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 97 QE-WRCKPDAETYNALINAHGRAGQW---------------------------------- 121
+E + C+P +YN L+NA A QW
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164
Query: 122 -RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI 180
A +D M + P +Y+ +IN +G +AL + +M++ GV PD+ +NI
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNI 224
Query: 181 LLSAFKSGSQYSKALSYFE-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
L+ F + A+ ++ L++ + + P+ T NI+I L K + D + I+ M++
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN 284
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
+ E D+ +Y+S+IH +G ++ E+ FN + +V+YN ++G + G K
Sbjct: 285 ERE--KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIK 342
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
E+L ++ I ++ +IVSY L+ + K +A ++ ++ + +Y I
Sbjct: 343 ESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFI 401
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
NG ++ A+ +++E+E G +V + +++ + + + ++ G++
Sbjct: 402 HGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
LN+ N+ IG + +A + M K + V+Y ILI G CK K+GEA +F
Sbjct: 462 LNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAF 521
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
++EM+ + YS +LC + +I A ++ SG DV+ + ++ +
Sbjct: 522 VKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCS 581
Query: 540 AGKMN 544
GK++
Sbjct: 582 VGKLD 586
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 224/473 (47%), Gaps = 4/473 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I++ + ++ARG M + KPD +Y+ +IN +AG+ A+ + D+M
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM-TDNGVGPDLVTHNILLSAFKSGSQY 191
+ P + YN LI+ + K A+ + ++ D+ V P++ THNI++S +
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
L +E MK D T + +IH L DKA +FN + E+K+ DVV+Y
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI--DVVTYN 329
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+++ + G+I+ + +M + +IVSYN L+ +G EA +++ +
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAK 388
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G+ D +Y ++ + KA GV + ++ + ++ +Y ++ID L++A
Sbjct: 389 GYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+++EM + G++ N L+ R S+ G+ L G + V+YN I
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
G++ +A K M + K D TY+IL+ G C+ K AL + + L
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 492 KEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+++ ++ G++ +A + M+ C+ ++VTY ++++ + G N
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 192/413 (46%), Gaps = 9/413 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N+MI ++ R+D ++ M++ + D TY++LI+ AG A ++ +++
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
TYN ++ G KE+L + + M ++ ++V++NIL+ +
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKID 376
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A + LM D TT I IH L +KA+ + + + S H DV +Y S
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV--ESSGGHLDVYAYAS 434
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
II ++E M G++ + NAL+G EA E+ +NG
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
RP +VSY L+ ++ K +A + + N KP+L +Y+ L+ + +D A+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE---TVLSAAQMRGIKLNTVAYNSAI 429
++ + Q G++ +V+ L+ G CS GK++ TV++ + R N V YN+ +
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIH--GLCSV-GKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
+ VG+ ++A ++ M K ++ D ++Y ++ G C A+ F ++
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDD 664
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 172/373 (46%), Gaps = 8/373 (2%)
Query: 175 LVTHNIL--LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
+V H+IL LS + + S+ + EL++ + D VI K D+A+D+
Sbjct: 44 VVYHHILRRLSETRMVNHVSRIV---ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDV 100
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
F MRE C P + SY ++++ + + Q E+ F G+ P++ +YN L+
Sbjct: 101 FKRMREIFG-CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
++A + + + GF+PD+ SY++++N ++ K A +F+ + + P++
Sbjct: 160 CKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV 219
Query: 353 VSYNALIDAYGSNGLLDDAIKIL-REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
YN LID + A+++ R +E + PNV + +++ +C + +
Sbjct: 220 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
+ + + Y+S I + G DKA ++ + ++K D VTY ++ G C+
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYT 531
K E+L M H K V+ Y+ ++ + G+I EA + LM + G + D TY
Sbjct: 340 KIKESLELWRIMEH-KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 532 SMLDAYTAAGKMN 544
+ G +N
Sbjct: 399 IFIHGLCVNGYVN 411
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 151/326 (46%), Gaps = 3/326 (0%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
++ LIK L + G I+ ++++ M + Y A Y + I + +++A G+ E
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMP-AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
++ D Y ++I+ + + A N++ +M + + + N LI
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
EA ++M NG P +V++NIL+ ++ +A ++ + M +PD T +I
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
++ L + R+ D A+++++ + E DV+ + +IH G++++ M
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLE--TDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
++V+YN L+ + G A +++ + + G +PDI+SY +++ +
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDA 361
A F+ + + + P + ++N L+ A
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 175/436 (40%), Gaps = 41/436 (9%)
Query: 35 KNFPFLIKELTQRGSIEHCNLVFQWMK-NQRNYCARNDIYNMMIRLHARHN--RIDQARG 91
K +I L++ G ++ C +++ MK N+R D+Y +H + +D+A
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNER----EKDLYTYSSLIHGLCDAGNVDKAES 311
Query: 92 LFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACG 151
+F E+ E + D TYN ++ R G+ + ++ + ++ + +YN LI
Sbjct: 312 VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLL 370
Query: 152 SSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTT 211
+G EA + + M G D T+ I + +KAL + ++ + D
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVY 430
Query: 212 TLNIVIHCLVKLRQYDKAIDIFNSMREK-------------------------------- 239
+I CL K ++ ++A ++ M +
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 240 -KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
K+ C P VVSY +I +G+ A ML G KP + +Y+ L+
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
AL ++++ Q+G D++ + L++ K A V ++ NLV+YN L
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
++ + G + A I M + G+QP+++S T++ C A+ GI
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 419 KLNTVAYNSAIGSYLN 434
+N + + +N
Sbjct: 671 FPTVYTWNILVRAVVN 686
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 299 KEALLVFNE-IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNA 357
+ A +F+ + G+ V Y +L ++ + E+I+ + K + +
Sbjct: 24 RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALS 83
Query: 358 LIDAYGSNGLLDDAIKILREM-EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR 416
+I YG N + D A+ + + M E G +P + S TLL A Q K+E++ + +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 417 GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
G+ N YN I E++KA G M K+ K D +Y+ +I+ K K +A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 477 LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN-LMKSSGCSPDVVTYTSMLD 535
L +EM + Y+ ++ + K+ A ++ L++ S P+V T+ M+
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 536 AYTAAGKMN 544
+ G+++
Sbjct: 264 GLSKCGRVD 272
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 126/330 (38%), Gaps = 41/330 (12%)
Query: 255 HLYSVSGQIENCEAAFNMMLAEGIKP----SIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
H+ + +N AAF + + P S V Y+ ++ + M + I+
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR-NKLKPNLVSYNALIDAYGSNGLLD 369
+ D S++ YG++ P +A VF+ ++ +P + SYN L++A+
Sbjct: 72 QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWV 131
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
+ E G+ PN+ + L+ + + K L G K + +Y++ I
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVI 191
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK-------------------- 469
G+ D AL L+ M ++ + D Y ILI G K
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 470 -------------MSKYG---EALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+SK G + L E M + YSS++ G + +AES
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAES 311
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
FN + S DVVTY +ML + GK+
Sbjct: 312 VFNELDERKASIDVVTYNTMLGGFCRCGKI 341
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 229/482 (47%), Gaps = 9/482 (1%)
Query: 67 CARND-IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
C ND +++++IR + + ++ +A F ++ + NALI + R G A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
+ ++ R+ + + T N ++NA G ++ ++ + GV PD+VT+N L+SA+
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
S +A M G P T N VI+ L K +Y++A ++F M +S P
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML--RSGLSP 338
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
D +Y S++ G + E F+ M + + P +V +++++ + G +AL+ F
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
N +K+ G PD V YT L+ Y R A + + + ++V+YN ++
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM---RGIKLNT 422
+L +A K+ EM + + P+ ++ L+ G C + G ++ + Q + I+L+
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILID--GHC-KLGNLQNAMELFQKMKEKRIRLDV 515
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
V YN+ + + VG+ D A ++ M K+I ++Y+IL++ C EA +E
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
M+ + + + +S++ Y + G + ES M S G PD ++Y +++ +
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 543 MN 544
M+
Sbjct: 636 MS 637
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 220/484 (45%), Gaps = 11/484 (2%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+M+ + ++++ ++QE PD TYN LI+A+ G A +M+ M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTH-NILLSAFKSGSQYS 192
P TYN +IN G ++ A V +M +G+ PD T+ ++L+ A K G
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
F M+ + PD + ++ + DKA+ FNS++E + PD V YT
Sbjct: 359 TE-KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE--AGLIPDNVIYTI 415
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I Y G I N ML +G +V+YN ++ M EA +FNE+ +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PD + T L++ + + Q A +F+ +K +++ ++V+YN L+D +G G +D A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM--RGIKLNTVAYNSAIG 430
+I +M I P +S L+ A CS+ E +M + IK + NS I
Sbjct: 536 EIWADMVSKEILPTPISYSILVNAL--CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
Y G + M + D ++Y LI G + +A +++M + +
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 491 SKEV--YSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPL 548
+V Y+SIL + +Q Q+ EAE M G +PD TYT M++ + + + E
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT-EAF 712
Query: 549 KYED 552
+ D
Sbjct: 713 RIHD 716
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 209/456 (45%), Gaps = 4/456 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN +I ++ +++A L M P TYN +IN + G++ A + +ML
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R+ + P +TY +L+ G+ E V M V PDLV + ++S F
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
KAL YF +K + PD I+I + A+++ N M ++ C DVV+Y +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG--CAMDVVTYNT 450
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
I+H + + FN M + P + L+ + G + A+ +F ++K+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
R D+V+Y +LL+ +G+ A+ ++ + ++ P +SY+ L++A S G L +A
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ EM I+P V+ +++ R E+ L G + ++YN+ I +
Sbjct: 571 RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Query: 433 LNVGEYDKALGLYKSMRKKK--IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+ KA GL K M +++ + D TY ++ G C+ ++ EA + +M+ +
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
+ Y+ ++ + Q + EA + M G SPD
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 168/378 (44%), Gaps = 2/378 (0%)
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
T + G + ++L+ + + +A F L++ N +I LV++
Sbjct: 157 TFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWV 216
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
+ A ++ + +S +V + +++ G++E + + +G+ P IV+YN
Sbjct: 217 ELAWGVYQEI--SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
L+ AY++ G+ +EA + N + GF P + +Y +++N + K ++A+ VF + R+
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
L P+ +Y +L+ G + + K+ +M + P++V ++++ R K
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
++ + G+ + V Y I Y G A+ L M ++ D VTY ++ G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
CK GEA EM L + ++ + K G + A F MK D
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 527 VVTYTSMLDAYTAAGKMN 544
VVTY ++LD + G ++
Sbjct: 515 VVTYNTLLDGFGKVGDID 532
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 161/352 (45%), Gaps = 5/352 (1%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F ++ T+ G+++ + F +K + N IY ++I+ + R I A L EM
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVK-EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+ C D TYN +++ + A + ++M A+ P T LI+ GN
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+ A+ + +KM + + D+VT+N LL F A + M I P + +I+
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
++ L +A +++ M K + P V+ S+I Y SG + E+ M++E
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIK--PTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 277 GIKPSIVSYNALV-GAYAAHGMGKEALLVFN-EIKQNGFRPDIVSYTSLLNAYGRSQKPQ 334
G P +SYN L+ G M K LV E +Q G PD+ +Y S+L+ + R + +
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
+A V + + P+ +Y +I+ + S L +A +I EM Q G P+
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 157/332 (47%), Gaps = 2/332 (0%)
Query: 205 HIRPDTTTLNIVIHCLVKL--RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
HI + L+ CL+++ R ++I NS+ S C + + +I Y + +
Sbjct: 121 HILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARK 180
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
+ AF ++ ++G SI + NAL+G+ G + A V+ EI ++G ++ +
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
++NA + K +K ++ + P++V+YN LI AY S GL+++A +++ M G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
P V + T++ + + + + V + G+ ++ Y S + G+ +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAY 502
++ MR + + D V ++ ++S + +AL + + L +Y+ ++ Y
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 503 SKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
++G I A + N M GC+ DVVTY ++L
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 229/465 (49%), Gaps = 10/465 (2%)
Query: 81 ARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR 140
A+ N+ D L +MQ + TY+ LIN R Q A+ ++ M++ P+
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 151
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
T ++L+N S EA+ + +M G P+ VT N L+ ++ S+A++ +
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
M +PD T +V++ L K D A ++ N M + K E P V+ Y +II
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE--PGVLIYNTIIDGLCKY 269
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
+++ F M +GI+P++V+Y++L+ +G +A + +++ + PD+ ++
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 321 TSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
++L++A+ + K +A ++ EM+KR+ + P++V+Y++LI+ + + LD+A ++ M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIE---TVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
P+VV+ TL+ G C K ++E V RG+ NTV YN I G
Sbjct: 389 SKHCFPDVVTYNTLIK--GFCKYK-RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
+ D A ++K M + + +TY L+ G CK K +A+ E + K+ + Y+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 497 SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++ K G++ + F + G PDVV Y +M+ + G
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 231/462 (50%), Gaps = 8/462 (1%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
++D A LF EM + R P ++ L++A + ++ +++ + M IP + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
LIN AL V KM G P++VT + LL+ + + S+A++ + M T
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
+P+T T N +IH L + +A+ + + M K C PD+V+Y +++ G +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTD 238
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
N M ++P ++ YN ++ + +AL +F E++ G RP++V+Y+SL+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 325 NA---YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+ YGR +R + +MI+R K+ P++ +++ALIDA+ G L +A K+ EM +
Sbjct: 299 SCLCNYGRWS--DASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
I P++V+ +L+ + + + + + + V YN+ I + ++
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
+ +++ M ++ + ++VTY ILI G + A +EM+ +P + Y+++L
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
K G++ +A F ++ S P + TY M++ AGK+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 214/456 (46%), Gaps = 14/456 (3%)
Query: 80 HARHNRIDQARGLFFEMQEWRCKPDAETYNALINA---HGRAGQWRWAMNIMDDMLRAAI 136
+ RI +A L +M +P+ T+N LI+ H +A + AM ++D M+
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE---AMALIDRMVAKGC 217
Query: 137 PPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALS 196
P TY ++N G+ A N+ KM + P ++ +N ++ AL+
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 197 YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHL 256
F+ M+ IRP+ T + +I CL ++ A + + M E+K +PDV +++++I
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK--INPDVFTFSALIDA 335
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
+ G++ E ++ M+ I PSIV+Y++L+ + H EA +F + PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 317 IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
+V+Y +L+ + + ++ ++ VF + + L N V+YN LI G D A +I +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 377 EMEQDGIQPNVVSICTLLAACGRCSQKGKIE---TVLSAAQMRGIKLNTVAYNSAIGSYL 433
EM DG+ PN+++ TLL G C + GK+E V Q ++ YN I
Sbjct: 456 EMVSDGVPPNIMTYNTLLD--GLC-KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
G+ + L+ ++ K +K D V Y +ISG C+ EA + +EM +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 494 VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
Y++++ A + G + M+S G + D T
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 167/325 (51%), Gaps = 2/325 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IYN +I ++ +D A LF EM+ +P+ TY++LI+ G+W A ++ DM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I P T++ LI+A G EA + +M + P +VT++ L++ F +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A FE M H PD T N +I K ++ ++ +++F M ++ + V+Y
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG--LVGNTVTYN 435
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+I +G + + F M+++G+ P+I++YN L+ +G ++A++VF ++++
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
P I +Y ++ ++ K + +F + +KP++V+YN +I + G ++A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 372 IKILREMEQDGIQPNVVSICTLLAA 396
+ +EM++DG PN TL+ A
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LIK + +E VF+ M +QR YN++I+ + D A+ +F EM
Sbjct: 402 LIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P+ TYN L++ + G+ AM + + + R+ + P+ TYN +I +G ++
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
++ ++ GV PD+V +N ++S F +A + F+ MK P++ N +I
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 220 LVKLRQYDKAIDIFNSMR 237
++ + + ++ MR
Sbjct: 581 RLRDGDREASAELIKEMR 598
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
+ LI+ L Q G + +F+ M + YN ++ ++ ++++A +F
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
+Q + +P TYN +I +AG+ ++ ++ + P YN +I+ G+
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSA-FKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
+EA + K+M ++G P+ +N L+ A + G + + A + M+ D +T+
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA-ELIKEMRSCGFAGDASTIG 610
Query: 215 IVIHCL 220
+V + L
Sbjct: 611 LVTNML 616
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
L+ L + G +E +VF++++ + YN+MI + +++ LF +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-TYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
KPD YN +I+ R G A + +M P+ YN LI A G+ + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
+ K+M G D T ++ + G
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHDG 619
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 196/368 (53%), Gaps = 4/368 (1%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
LI A G GN+ A V ++ G P+++++ L+ ++ G + + A + F M+ +
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM-REKKSECHPDVVSYTSIIHLYSVSGQIE 264
P T I++ V+ ++ +A ++F ++ EKKS PD Y +I++Y +G E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
F+ M+ +G+ S V+YN+L+ ++ KE ++++++++ +PD+VSY L+
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
AYGR+++ ++A VFE + ++P +YN L+DA+ +G+++ A + + M +D I
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
P++ S T+L+A S E ++ G + N V Y + I Y + +K + +
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
Y+ MR IKA+ T ++ S + +G AL + +EM +P ++ + +L S
Sbjct: 442 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAST 501
Query: 505 QGQIVEAE 512
Q ++ EA+
Sbjct: 502 QDELEEAK 509
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 173/352 (49%), Gaps = 8/352 (2%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+ +W++ Q + + M+I + + + A + + + P+ +Y AL+ ++
Sbjct: 125 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESY 184
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD---NGVG 172
GR G+ A I M + PS TY ++ +KEA V + + D + +
Sbjct: 185 GRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLK 244
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
PD +++++ +K Y KA F M G + T T N ++ ++ K I
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---I 301
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
++ M ++S+ PDVVSY +I Y + + E + F ML G++P+ +YN L+ A+
Sbjct: 302 YDQM--QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
A GM ++A VF ++++ PD+ SYT++L+AY + + A F+ IK + +PN+
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
V+Y LI Y ++ +++ +M GI+ N + T++ A GRC G
Sbjct: 420 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG 471
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 188/421 (44%), Gaps = 14/421 (3%)
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
Q R M + D AA + + L+ S+G+ L K D G+ DLV
Sbjct: 53 QKRRKMEVFKD---AADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGT 109
Query: 180 IL-LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
++ K + S+ L + + ++I KL ++ A + + +
Sbjct: 110 LVRFKQLKKWNLVSEILEWLRYQNWWNF--SEIDFLMLITAYGKLGNFNGAERVLSVL-- 165
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
K P+V+SYT+++ Y G+ N EA F M + G +PS ++Y ++ +
Sbjct: 166 SKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKF 225
Query: 299 KEALLVFNEI---KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY 355
KEA VF + K++ +PD Y ++ Y ++ +KAR VF + + + V+Y
Sbjct: 226 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 285
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
N+L+ S + KI +M++ IQP+VVS L+ A GR ++ + +V
Sbjct: 286 NSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 342
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
G++ AYN + ++ G ++A ++KSMR+ +I D +YT ++S S
Sbjct: 343 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 402
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
A F + + + Y +++ Y+K + + + M+ SG + T+++D
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 536 A 536
A
Sbjct: 463 A 463
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 138/282 (48%), Gaps = 12/282 (4%)
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
S + + L+ AY G A V + + + G P+++SYT+L+ +YGR K A +F
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM---EQDGIQPNVVSICTLLAAC 397
++ + +P+ ++Y ++ + +A ++ + ++ ++P+ ++
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ K V S+ +G+ +TV YNS + + E K +Y M++ I+ D
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDV 314
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
V+Y +LI + + EALS EEM+ + + + Y+ +L A++ G + +A++ F
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 518 MKSSGCSPDVVTYTSMLDAYTAAGKMN-----FEPLKYEDGF 554
M+ PD+ +YT+ML AY A M F+ +K DGF
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV-DGF 415
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARND--IYNMMIRLHARHNRIDQARGLF 93
+ ++K + + VF+ + +++ + D +Y+MMI ++ + ++AR +F
Sbjct: 211 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 94 --------------------FE------------MQEWRCKPDAETYNALINAHGRAGQW 121
FE MQ +PD +Y LI A+GRA +
Sbjct: 271 SSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 330
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
A+++ ++ML A + P+ YN L++A SG ++A V K M + + PDL ++ +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS 241
LSA+ + S A +F+ +K P+ T +I K +K ++++ MR
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 242 ECHPDVVSYTSIIHLYSVSGQIENCEAA---FNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
+ + ++ T+I+ SG+ +N +A + M + G+ P + N L+ +
Sbjct: 451 KANQTIL--TTIM---DASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 505
Query: 299 KEA 301
+EA
Sbjct: 506 EEA 508
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 196/368 (53%), Gaps = 4/368 (1%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
LI A G GN+ A V ++ G P+++++ L+ ++ G + + A + F M+ +
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM-REKKSECHPDVVSYTSIIHLYSVSGQIE 264
P T I++ V+ ++ +A ++F ++ EKKS PD Y +I++Y +G E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
F+ M+ +G+ S V+YN+L+ ++ KE ++++++++ +PD+VSY L+
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
AYGR+++ ++A VFE + ++P +YN L+DA+ +G+++ A + + M +D I
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
P++ S T+L+A S E ++ G + N V Y + I Y + +K + +
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
Y+ MR IKA+ T ++ S + +G AL + +EM +P ++ + +L S
Sbjct: 449 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAST 508
Query: 505 QGQIVEAE 512
Q ++ EA+
Sbjct: 509 QDELEEAK 516
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 173/352 (49%), Gaps = 8/352 (2%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+ +W++ Q + + M+I + + + A + + + P+ +Y AL+ ++
Sbjct: 132 ILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESY 191
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD---NGVG 172
GR G+ A I M + PS TY ++ +KEA V + + D + +
Sbjct: 192 GRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLK 251
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
PD +++++ +K Y KA F M G + T T N ++ ++ K I
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---I 308
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
++ M ++S+ PDVVSY +I Y + + E + F ML G++P+ +YN L+ A+
Sbjct: 309 YDQM--QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
A GM ++A VF ++++ PD+ SYT++L+AY + + A F+ IK + +PN+
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
V+Y LI Y ++ +++ +M GI+ N + T++ A GRC G
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG 478
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 188/421 (44%), Gaps = 14/421 (3%)
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
Q R M + D AA + + L+ S+G+ L K D G+ DLV
Sbjct: 60 QKRRKMEVFKD---AADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGT 116
Query: 180 IL-LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
++ K + S+ L + + ++I KL ++ A + + +
Sbjct: 117 LVRFKQLKKWNLVSEILEWLRYQNWWNF--SEIDFLMLITAYGKLGNFNGAERVLSVL-- 172
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
K P+V+SYT+++ Y G+ N EA F M + G +PS ++Y ++ +
Sbjct: 173 SKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKF 232
Query: 299 KEALLVFNEI---KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY 355
KEA VF + K++ +PD Y ++ Y ++ +KAR VF + + + V+Y
Sbjct: 233 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 292
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
N+L+ S + KI +M++ IQP+VVS L+ A GR ++ + +V
Sbjct: 293 NSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 349
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
G++ AYN + ++ G ++A ++KSMR+ +I D +YT ++S S
Sbjct: 350 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 409
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
A F + + + Y +++ Y+K + + + M+ SG + T+++D
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Query: 536 A 536
A
Sbjct: 470 A 470
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 138/282 (48%), Gaps = 12/282 (4%)
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
S + + L+ AY G A V + + + G P+++SYT+L+ +YGR K A +F
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM---EQDGIQPNVVSICTLLAAC 397
++ + +P+ ++Y ++ + +A ++ + ++ ++P+ ++
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ K V S+ +G+ +TV YNS + + E K +Y M++ I+ D
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDV 321
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
V+Y +LI + + EALS EEM+ + + + Y+ +L A++ G + +A++ F
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 518 MKSSGCSPDVVTYTSMLDAYTAAGKMN-----FEPLKYEDGF 554
M+ PD+ +YT+ML AY A M F+ +K DGF
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV-DGF 422
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARND--IYNMMIRLHARHNRIDQARGLF 93
+ ++K + + VF+ + +++ + D +Y+MMI ++ + ++AR +F
Sbjct: 218 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 94 --------------------FE------------MQEWRCKPDAETYNALINAHGRAGQW 121
FE MQ +PD +Y LI A+GRA +
Sbjct: 278 SSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 337
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
A+++ ++ML A + P+ YN L++A SG ++A V K M + + PDL ++ +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS 241
LSA+ + S A +F+ +K P+ T +I K +K ++++ MR
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 242 ECHPDVVSYTSIIHLYSVSGQIENCEAA---FNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
+ + ++ T+I+ SG+ +N +A + M + G+ P + N L+ +
Sbjct: 458 KANQTIL--TTIM---DASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 512
Query: 299 KEA 301
+EA
Sbjct: 513 EEA 515
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 191/386 (49%), Gaps = 2/386 (0%)
Query: 81 ARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR 140
A R +A LF E+++ KP YNAL+ + + G + A +++ +M + + P
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
TY+ LI+A ++G W+ A V K+M V P+ + LL+ F+ ++ K +
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
MK ++PD N+VI K D A+ F+ M + E PD V++ ++I +
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE--PDRVTWNTLIDCHCKH 492
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G+ E F M G P +YN ++ +Y + + ++K G P++V++
Sbjct: 493 GRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
T+L++ YG+S + A E +K LKP+ YNALI+AY GL + A+ R M
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
DG++P+++++ +L+ A G + + VL + G+K + V Y + + + + V ++ K
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 441 ALGLYKSMRKKKIKADSVTYTILISG 466
+Y+ M K D ++L S
Sbjct: 673 VPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 190/380 (50%), Gaps = 3/380 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
+I L G +F+ ++ Q R YN +++ + + + A + EM++
Sbjct: 310 IISALADSGRTLEAEALFEELR-QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
PD TY+ LI+A+ AG+W A ++ +M + P+ ++ L+ G W++
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
V K+M GV PD +N+++ F + A++ F+ M I PD T N +I C
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
K ++ A ++F +M + C P +Y +I+ Y + ++ + M ++GI
Sbjct: 489 HCKHGRHIVAEEMFEAMERRG--CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
P++V++ LV Y G +A+ E+K G +P Y +L+NAY + ++A
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
F ++ + LKP+L++ N+LI+A+G + +A +L+ M+++G++P+VV+ TL+ A R
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Query: 400 CSQKGKIETVLSAAQMRGIK 419
+ K+ V M G K
Sbjct: 667 VDKFQKVPVVYEEMIMSGCK 686
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 226/485 (46%), Gaps = 11/485 (2%)
Query: 56 VFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
V W++ + N C ++ Y+++I R ++ +A F Q+ P TYNALI A
Sbjct: 153 VVSWLQ-KHNLCFSYELLYSILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGA 206
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA--LNVCKKMTDNGVG 172
R A+N++ M + Y+ +I + S L + K++ + +
Sbjct: 207 CARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLE 266
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
D+ N ++ F SKAL + + T + T TL +I L + +A +
Sbjct: 267 LDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEAL 326
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
F +R+ S P +Y +++ Y +G +++ E+ + M G+ P +Y+ L+ AY
Sbjct: 327 FEELRQ--SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
G + A +V E++ +P+ ++ LL + + QK V + +K +KP+
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
YN +ID +G LD A+ M +GI+P+ V+ TL+ + + E + A
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
+ RG YN I SY + +D L M+ + I + VT+T L+ K +
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
+ +A+ +EEM + L S +Y++++ AY+++G +A + F +M S G P ++ S
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 533 MLDAY 537
+++A+
Sbjct: 625 LINAF 629
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 208/482 (43%), Gaps = 39/482 (8%)
Query: 73 YNMMIRLHARHNRIDQAR--GLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
Y+++I+ R N+ID L+ E++ + + D + N +I ++G A+ ++
Sbjct: 235 YSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGM 294
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
+ +T ++I+A SG EA + +++ +G+ P +N LL +
Sbjct: 295 AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
A S M+ + PD T +++I V +++ A + M + + P+ +
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM--EAGDVQPNSFVF 412
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
+ ++ + G+ + M + G+KP YN ++ + A+ F+ +
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 472
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
G PD V++ +L++ + + + A +FE ++R P +YN +I++YG DD
Sbjct: 473 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 532
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
++L +M+ GI PNVV+ TL+ G+ + L + G+K ++ YN+ I
Sbjct: 533 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+Y G ++A+ ++ M +K + LI+
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN------------------------- 627
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKY 550
A+ + + EA + MK +G PDVVTYT+++ A K P+ Y
Sbjct: 628 ----------AFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 551 ED 552
E+
Sbjct: 678 EE 679
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 184/404 (45%), Gaps = 9/404 (2%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
Y+ LI+A G S EA + +K T + P +T+N L+ A + KAL+ M+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQT---LTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKA--IDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
+ D ++VI L + + D + ++ + K E DV II ++ S
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLEL--DVQLVNDIIMGFAKS 282
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G M A G+ + +++ A A G EA +F E++Q+G +P +Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
+LL Y ++ + A + +++ + P+ +Y+ LIDAY + G + A +L+EME
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
+QPN LLA + K VL + G+K + YN I ++ D
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A+ + M + I+ D VT+ LI CK ++ A E M Y+ ++
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+Y Q + + + MKS G P+VVT+T+++D Y +G+ N
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 7/282 (2%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARND--IYNMMIRLHARHNRIDQARGLFF 94
F L+ RG + FQ +K ++ + D YN++I + N +D A F
Sbjct: 412 FSRLLAGFRDRGEWQK---TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFD 468
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 154
M +PD T+N LI+ H + G+ A + + M R P +TYN +IN+ G
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
W + + KM G+ P++VTH L+ + +++ A+ E MK ++P +T N
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 215 IVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMML 274
+I+ + ++A++ F M P +++ S+I+ + + A M
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVM--TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 275 AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
G+KP +V+Y L+ A ++ +V+ E+ +G +PD
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+ ++ ++ + R + A EM+ KP + YNALINA+ + G A+N M
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ PS N+LINA G EA V + M +NGV PD+VT+ L+ A ++
Sbjct: 612 SDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQ 671
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
K +E M + +PD +++ L ++Q +A
Sbjct: 672 KVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 234/494 (47%), Gaps = 10/494 (2%)
Query: 54 NLVFQWMKNQRNYCARNDIY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNAL 111
NLV + K ++IY N+MI R + A + ++ + +PD T+N L
Sbjct: 105 NLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 164
Query: 112 INAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV 171
I G+ A+ ++D M+ P TYN+++N SG+ AL++ +KM + V
Sbjct: 165 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
D+ T++ ++ + A+S F+ M+ I+ T N ++ L K +++
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+ M + E P+V+++ ++ ++ G+++ + M+ GI P+I++YN L+
Sbjct: 285 LLKDMVSR--EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
Y EA + + + +N PDIV++TSL+ Y ++ VF I + L N
Sbjct: 343 YCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
V+Y+ L+ + +G + A ++ +EM G+ P+V++ LL G C GK+E L
Sbjct: 403 AVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD--GLCDN-GKLEKALE 459
Query: 412 A---AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
Q + L V Y + I G+ + A L+ S+ K +K + +TYT++ISG C
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
K EA + +M + Y++++ A+ + G + + MKS G S D
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Query: 529 TYTSMLDAYTAAGK 542
+ ++D +A K
Sbjct: 580 SIKMVIDMLLSAMK 593
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 215/440 (48%), Gaps = 8/440 (1%)
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
T N +IN R + +A +++ +++ P +T+N LI G EA+ + +M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
+NG PD+VT+N +++ S AL M+ +++ D T + +I L +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
D AI +F M K + VV+Y S++ +G+ + M++ I P+++++N
Sbjct: 245 DAAISLFKEMETKGIK--SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
L+ + G +EA ++ E+ G P+I++Y +L++ Y + +A + +++ RN
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
K P++V++ +LI Y +DD +K+ R + + G+ N V+ L+ G C Q GKI
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ--GFC-QSGKI 419
Query: 407 ---ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
E + G+ + + Y + + G+ +KAL +++ ++K K+ V YT +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGC 523
I G CK K +A + + + + Y+ ++ K+G + EA M+ G
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 524 SPDVVTYTSMLDAYTAAGKM 543
+P+ TY +++ A+ G +
Sbjct: 540 APNDCTYNTLIRAHLRDGDL 559
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 175/380 (46%), Gaps = 2/380 (0%)
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
P LV + SA Q++ L + + ++ I + TLNI+I+C + + A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
+ + E PD ++ ++I + G++ + M+ G +P +V+YN++V
Sbjct: 146 LGKVMKLGYE--PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
G AL + ++++ + D+ +Y++++++ R A +F+ ++ +K ++
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
V+YN+L+ G +D +L++M I PNV++ LL + + + +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
RGI N + YN+ + Y +A + M + K D VT+T LI G C + +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
+ + + L + YS ++ + + G+I AE F M S G PDV+TY
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 533 MLDAYTAAGKMNFEPLKYED 552
+LD GK+ +ED
Sbjct: 444 LLDGLCDNGKLEKALEIFED 463
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 134/277 (48%)
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
A F M+ PS+V ++ A A L +++ NG +I + ++N +
Sbjct: 74 ALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
R K A V + + +P+ ++N LI G + +A+ ++ M ++G QP+V
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
V+ +++ R +L + R +K + Y++ I S G D A+ L+K
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
M K IK+ VTY L+ G CK K+ + +++M+ ++ + ++ +L + K+G+
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ EA + M + G SP+++TY +++D Y +++
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%)
Query: 332 KPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
K A +F+ + R++ P+LV ++ A + + +++E +GI N+ ++
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
++ RC + +VL G + +T +N+ I G+ +A+ L M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 452 KIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEA 511
+ D VTY +++G C+ AL + +M + YS+I+ + + G I A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 512 ESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
S F M++ G VVTY S++ AGK N L +D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 237/498 (47%), Gaps = 17/498 (3%)
Query: 55 LVFQWMKNQRNYCARNDIYNM--MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALI 112
LV K + + IY + MI R ++ A ++ + +PD +N L+
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 165
Query: 113 NAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG 172
N + A+ ++D M+ P+ T N L+N +G +A+ + +M + G
Sbjct: 166 NGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQ 225
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
P+ VT+ +L+ Q + A+ M+ +I+ D +I+I L K D A ++
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
FN M K + D+++Y ++I + +G+ ++ M+ I P++V+++ L+ ++
Sbjct: 286 FNEMEIKGFK--ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
G +EA + E+ Q G P+ ++Y SL++ + + + ++A + +++ P++
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
+++N LI+ Y +DD +++ REM G+ N V+ TL+ G C Q GK+E
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ--GFC-QSGKLEVAKKL 460
Query: 413 AQ---MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
Q R ++ + V+Y + + GE +KAL ++ + K K++ D Y I+I G C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
SK +A + + + Y+ ++ ++ + +A+ F M G +PD +T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 530 YTSML-------DAYTAA 540
Y ++ DA TAA
Sbjct: 581 YNILIRAHLGDDDATTAA 598
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 206/420 (49%), Gaps = 2/420 (0%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A+++ DM+++ P+ +N L +A + ++ L +CK+M G+ + T +I+++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
F + S A S + PDT N +++ L + +A+++ + M E +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK- 190
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
P +++ ++++ ++G++ + + M+ G +P+ V+Y ++ G A+
Sbjct: 191 -PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+ ++++ + D V Y+ +++ + A +F ++ K ++++YN LI +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
+ G DD K+LR+M + I PNVV+ L+ + + + + + +L RGI NT+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
YNS I + ++A+ + M K D +T+ ILI+G CK ++ + L EM
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ + Y++++ + + G++ A+ F M S PD+V+Y +LD G++
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 238/527 (45%), Gaps = 12/527 (2%)
Query: 24 LLNRWVGRFARKNFPFLIKELTQRGSIEHC--NLVFQWMKNQRNYCARNDIYNMMIRLHA 81
++ R + +R P L++ T R ++ +C L+F + + RN Y +
Sbjct: 5 MIRRLSSQASRFVQPRLLETGTLRIALINCPNELLFCCERGFSTFSDRNLSYRDKLSSGL 64
Query: 82 RHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS 141
+ D A LF +M + R P +N L +A + Q+ + + M I S
Sbjct: 65 VGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIY 124
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
T + +IN A + K+ G PD V N LL+ + S+AL + M
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
+P TLN +++ L + A+ + + M E + P+ V+Y ++++ SG
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE--TGFQPNEVTYGPVLNVMCKSG 242
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
Q M IK V Y+ ++ G A +FNE++ GF+ DI++Y
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 322 SLLNAYGRSQK-PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
+L+ + + + A+ + +MIKR K+ PN+V+++ LID++ G L +A ++L+EM Q
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM---RGIKLNTVAYNSAIGSYLNVGE 437
GI PN ++ +L+ G C ++ ++E + + +G + + +N I Y
Sbjct: 362 RGIAPNTITYNSLID--GFC-KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
D L L++ M + + A++VTY L+ G C+ K A +EM+ ++ Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+L G++ +A F ++ S D+ Y ++ A K++
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 210/472 (44%), Gaps = 8/472 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
I+N ++ R+ +A L M E KP T N L+N G+ A+ ++D M
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ P+ TY ++N SG A+ + +KM + + D V ++I++
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A + F M+ + D T N +I ++D + M ++K P+VV+++
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK--ISPNVVTFS 337
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+I + G++ + M+ GI P+ ++YN+L+ + +EA+ + + +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G PDI+++ L+N Y ++ + +F + + N V+YN L+ + +G L+ A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS---AAQMRGIKLNTVAYNSA 428
K+ +EM ++P++VS LL G C G++E L + ++L+ Y
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLD--GLCDN-GELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I N + D A L+ S+ K +K D+ Y I+IS C+ +A +M
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
+ Y+ ++ A+ A MKSSG DV T +++ ++
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 6/311 (1%)
Query: 18 YDDIDGLLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYN 74
+DD LL + R N F LI + G + + + + M QR YN
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITYN 372
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 134
+I + NR+++A + M C PD T+N LIN + +A + + + +M
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 135 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKA 194
+ + TYN L+ SG + A + ++M V PD+V++ ILL + KA
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 195 LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII 254
L F ++ + + D I+IH + + D A D+F S+ K + D +Y +I
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL--DARAYNIMI 550
Query: 255 HLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR 314
+ + F M EG P ++YN L+ A+ A + E+K +GF
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610
Query: 315 PDIVSYTSLLN 325
D+ + ++N
Sbjct: 611 ADVSTVKMVIN 621
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 140/297 (47%), Gaps = 3/297 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
++++I + ++ +A L EM + P+ TYN+LI+ + + A+ ++D M+
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T+N LIN + + L + ++M+ GV + VT+N L+ F +
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A F+ M +RPD + I++ L + +KA++IF + + K E D+ Y
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL--DIGIYMI 513
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
IIH + ++++ F + +G+K +YN ++ +A ++F ++ + G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
PD ++Y L+ A+ A + E +K + ++ + +I+ S+G LD
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELD 629
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQ 97
L++ Q G +E +FQ M ++R R DI Y +++ + +++A +F +++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRR---VRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
+ + + D Y +I+ A + A ++ + + YN +I+ +
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
+A + +KMT+ G PD +T+NIL+ A + A E MK + D +T+ +VI
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Query: 218 HCLVKLRQYDKA-IDIFNSMR 237
+ L + DK+ +D+ ++ R
Sbjct: 621 NMLSS-GELDKSFLDMLSTTR 640
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 209/440 (47%), Gaps = 2/440 (0%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
+P+ T++ LIN G+ A+ ++D M+ P T N L+N SG EA+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+ KM + G P+ VT+ +L+ Q + A+ M+ +I+ D +I+I L
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K D A ++FN M K ++++Y +I + +G+ ++ M+ I P+
Sbjct: 275 KHGSLDNAFNLFNEMEMKG--ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+V+++ L+ ++ G +EA + E+ G PD ++YTSL++ + + KA + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
++ PN+ ++N LI+ Y +DD +++ R+M G+ + V+ TL+
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+ + + R + N V Y + + GE +KAL +++ + K K++ D Y
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
I+I G C SK +A + + + Y+ ++ K+G + EAE F M+
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 522 GCSPDVVTYTSMLDAYTAAG 541
G +PD TY ++ A+ G
Sbjct: 573 GHAPDGWTYNILIRAHLGDG 592
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/523 (23%), Positives = 233/523 (44%), Gaps = 9/523 (1%)
Query: 25 LNRWVGRFARKNFPFLIKELTQRGSIEHC--NLVFQWMKNQRNYCARNDIYNMMIRLHAR 82
L+ V +F + P L++ T R ++ +C L F + + RN Y +R
Sbjct: 9 LSSQVSKFVQ---PRLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERLRSGLV 65
Query: 83 HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 142
+ D A LF +M R P ++ L +A + Q+ + + M I + T
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
+ +IN A + K+ G P+ +T + L++ + S+AL + M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
+PD T+N +++ L + +A+ + + M E C P+ V+Y ++++ SGQ
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG--CQPNAVTYGPVLNVMCKSGQ 243
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
M IK V Y+ ++ HG A +FNE++ G +I++Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 323 LLNAYGRSQK-PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
L+ + + + A+ + +MIKR K+ PN+V+++ LID++ G L +A ++ +EM
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
GI P+ ++ +L+ + + K ++ +G N +N I Y D
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
L L++ M + + AD+VTY LI G C++ K A +EM+ K+P + Y +L
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
G+ +A F ++ S D+ Y ++ A K++
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 184/396 (46%), Gaps = 2/396 (0%)
Query: 88 QARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 147
+A L +M E+ C+P+A TY ++N ++GQ AM ++ M I Y+ +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
+ G+ A N+ +M G+ +++T+NIL+ F + ++ M I
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
P+ T +++I VK + +A ++ M + PD ++YTS+I + ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG--IAPDTITYTSLIDGFCKENHLDKAN 388
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
++M+++G P+I ++N L+ Y + L +F ++ G D V+Y +L+ +
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
K A+ +F+ + K+ PN+V+Y L+D NG + A++I ++E+ ++ ++
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
++ S+ + + ++G+K YN IG G +A L++
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
M + D TY ILI +++ +EE+
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 184/399 (46%), Gaps = 3/399 (0%)
Query: 67 CARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
C N + Y ++ + + + A L +M+E K DA Y+ +I+ + G A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
N+ ++M I + TYN LI ++G W + + + M + P++VT ++L+ +F
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
+ +A + M I PDT T +I K DKA + + M K C P
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG--CDP 401
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
++ ++ +I+ Y + +I++ F M G+ V+YN L+ + G A +F
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
E+ P+IV+Y LL+ + + +KA +FE I+++K++ ++ YN +I +
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
+DDA + + G++P V + ++ + + E + + G + Y
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
N I ++L G+ K++ L + +++ D+ T ++I
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 2/288 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
++++I + ++ +A L EM PD TY +LI+ + A ++D M+
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P+ T+N LIN + + L + +KM+ GV D VT+N L+ F + +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A F+ M + P+ T I++ L + +KA++IF + + K E D+ Y
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL--DIGIYNI 513
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
IIH + ++++ F + +G+KP + +YN ++G G EA L+F +++++G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
PD +Y L+ A+ K+ + E +KR + + +ID
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 91/235 (38%), Gaps = 36/235 (15%)
Query: 35 KNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFF 94
+ F LI + I+ +F+ M + R A YN +I+ +++ A+ LF
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA-------------------- 134
EM + P+ TY L++ G+ A+ I + + ++
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 135 ---------------AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
+ P TYN +I G EA + +KM ++G PD T+N
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
IL+ A +K++ E +K D +T+ +VI L R +D+ +
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 181/349 (51%), Gaps = 7/349 (2%)
Query: 191 YSKALSYFELMKGTHIR-PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
+ +AL FE + H P+ + ++ L + Q A++IF + V
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGD---RVQV 227
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG--MGKEALLVFNE 307
Y +++ +YS SG+ + + M G P ++S+N L+ A G A+ + +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
++ +G RPD ++Y +LL+A R A VFE ++ ++ +P+L +YNA+I YG GL
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNS 427
+A ++ E+E G P+ V+ +LL A R K++ V Q G + + YN+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIK-ADSVTYTILISGSCKMSKYGEALSFMEEMMHL 486
I Y G+ D AL LYK M+ + D++TYT+LI K ++ EA + M EM+ +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 487 KLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
+ + + YS+++C Y+K G+ EAE TF+ M SG PD + Y+ MLD
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 229/514 (44%), Gaps = 48/514 (9%)
Query: 69 RNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW--RWAMN 126
R +YN M+ +++R + +A+ L M++ C PD ++N LINA ++G A+
Sbjct: 224 RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 127 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFK 186
++D + + + P TYN L++AC N A+ V + M + PDL T+N ++S +
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
++A F ++ PD T N +++ + R +K +++ M +K D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM--QKMGFGKD 401
Query: 247 VVSYTSIIHLYSVSGQIE----------------------------------NCEAAFNM 272
++Y +IIH+Y GQ++ EAA M
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 273 --MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
ML GIKP++ +Y+AL+ YA G +EA F+ + ++G +PD ++Y+ +L+ R
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD-GIQPNVVS 389
+ +KA G++ + + P+ Y +I DD K +R+ME+ G+ P +S
Sbjct: 522 NETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS 581
Query: 390 ICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR 449
+ C + + L A G +L S +GSY + G + +A L + ++
Sbjct: 582 SVLVKGECFDLAARQ-----LKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLK 636
Query: 450 KKKIKADSVTYTILISGSCKMSKYGEALS--FMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
+ + + LI CK++ AL F + +H S +Y ++L
Sbjct: 637 EHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEH 696
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
EA F+ ++ SGC SM+ Y G
Sbjct: 697 YAEASQVFSDLRLSGCEASESVCKSMVVVYCKLG 730
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 181/374 (48%), Gaps = 7/374 (1%)
Query: 151 GSSGNW-KEALNV-CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRP 208
G G W +E+L V + VG + +N ++ + ++SKA + M+ P
Sbjct: 199 GVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVP 258
Query: 209 DTTTLNIVIHCLVKLRQY--DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
D + N +I+ +K + A+++ + +R S PD ++Y +++ S ++
Sbjct: 259 DLISFNTLINARLKSGGLTPNLAVELLDMVR--NSGLRPDAITYNTLLSACSRDSNLDGA 316
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
F M A +P + +YNA++ Y G+ EA +F E++ GF PD V+Y SLL A
Sbjct: 317 VKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 327 YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ-DGIQP 385
+ R + +K + V++ +++ + ++YN +I YG G LD A+++ ++M+ G P
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 386 NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
+ ++ L+ + G+ ++ + ++S GIK Y++ I Y G+ ++A +
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQ 505
M + K D++ Y++++ + ++ +A +M+ S +Y ++ K+
Sbjct: 497 SCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKE 556
Query: 506 GQIVEAESTFNLMK 519
+ + + T M+
Sbjct: 557 NRSDDIQKTIRDME 570
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 183/396 (46%), Gaps = 2/396 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+Y +I + + +A + +++ PD +T+N+L++A+ + G + A I + M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+R P+ + N L++A G +E V +++ D G + ++L AF
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+ + MK P ++I L K ++ A + + M E + ++ +
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKV--ELAIWN 931
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
S++ +Y+ + + + G++P +YN L+ Y +E L+ +++
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G P + +Y SL++A+G+ + ++A +FE + LK + Y+ ++ +G A
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
K+L+ M+ GI+P + ++ L+ + + E VLS + ++L T+ Y+S I +
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
YL +Y+ + M+K+ ++ D +T + +
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAA 1147
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 185/430 (43%), Gaps = 53/430 (12%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
Y ++I A G W++A +V + +G PDL T N L+SA+ Y +A + F M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 203 GTHIRPDTTTLNIVIHCLV---KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
P ++NI++H L +L + ++ M K S+ S ++ ++
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKS-----SILLMLDAFAR 869
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
+G I + ++ M A G P+I Y ++ ++A ++ +E+++ F+ ++
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 929
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
+ S+L Y + +K V++ IK L+P+ +YN LI Y + ++ ++++M
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
G+ P + + +L++A G+ + E + +G+KL+ Y++ + + G
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
KA L + M+ I+ T MHL ++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLAT------------------------MHL-----------LM 1074
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG----------KMNFEPLK 549
+YS G EAE + +K + + Y+S++DAY + +M E L+
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 550 YEDGFWKCML 559
+ W C +
Sbjct: 1135 PDHRIWTCFV 1144
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 172/405 (42%), Gaps = 40/405 (9%)
Query: 139 SRSTYNNLINACGSSGNWKEALNVCKKMTDNGV-GPDLVTHNILLSAFKSG-SQYSKALS 196
S + Y L++ C ++ ++ EA V + +G + V ++++ K G + + +
Sbjct: 680 SSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVV 739
Query: 197 YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHL 256
KG H +I I K + + KA + ++R+ S PD+ ++ S++
Sbjct: 740 NQAETKGFHFACSPMYTDI-IEAYGKQKLWQKAESVVGNLRQ--SGRTPDLKTWNSLMSA 796
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
Y+ G E A FN M+ +G P++ S N L+ A G +E +V E++ GF+
Sbjct: 797 YAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKIS 856
Query: 317 IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
S +L+A+ R+ + + ++ +K P + Y +I+ + DA ++
Sbjct: 857 KSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVS 916
Query: 377 EMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
EME+ K+ +NS + Y +
Sbjct: 917 EMEE-----------------------------------ANFKVELAIWNSMLKMYTAIE 941
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
+Y K + +Y+ +++ ++ D TY LI C+ + E M++M +L L + Y
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 497 SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
S++ A+ KQ + +AE F + S G D Y +M+ +G
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG 1046
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 163/377 (43%), Gaps = 7/377 (1%)
Query: 35 KNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFF 94
K + L+ Q G E +F M I N+++ R+++ +
Sbjct: 788 KTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESI-NILLHALCVDGRLEELYVVVE 846
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 154
E+Q+ K + +++A RAG I M A P+ Y +I
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
++A + +M + +L N +L + + Y K + ++ +K T + PD TT N
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYN 966
Query: 215 IVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMML 274
+I + R+ ++ + MR + P + +Y S+I + +E E F +L
Sbjct: 967 TLIIMYCRDRRPEEGYLLMQQMRNLGLD--PKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 275 AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQ 334
++G+K Y+ ++ G +A + +K G P + + L+ +Y S PQ
Sbjct: 1025 SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN-VVSICTL 393
+A V +K +++ + Y+++IDAY + + I+ L EM+++G++P+ + C +
Sbjct: 1085 EAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Query: 394 LAACGRCSQKGKIETVL 410
AA K KIE +L
Sbjct: 1145 RAA---SFSKEKIEVML 1158
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 41/237 (17%)
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD--AIKILRE 377
Y +++ Y RS K KA+ + + +++ P+L+S+N LI+A +G L A+++L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
+ G++P+ ++ TLL+AC R S
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSN----------------------------------- 312
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILIS--GSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
D A+ +++ M + + D TY +IS G C ++ E L FME + P Y
Sbjct: 313 LDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL-FMELELKGFFP-DAVTY 370
Query: 496 SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
+S+L A++++ + + + M+ G D +TY +++ Y G+++ Y+D
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 17/255 (6%)
Query: 308 IKQNGFRPDIVS----------YTSLLNAYGRSQKPQKARGVFEMIK-RNKLKPNLVSYN 356
+K N F DI+ Y ++ + G+ + Q+A VFE + R+ PN
Sbjct: 137 LKSNQFVADILDARLVQMTPTDYCFVVKSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVA 195
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR 416
A++ G A++I E + V ++ R + K + ++ A + R
Sbjct: 196 AILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQR 254
Query: 417 GIKLNTVAYNSAIGSYLNVGEY--DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
G + +++N+ I + L G + A+ L +R ++ D++TY L+S + S
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 475 EALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
A+ E+M + Y++++ Y + G EAE F ++ G PD VTY S+L
Sbjct: 315 GAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Query: 535 DAYTAAGKMNFEPLK 549
Y A + N E +K
Sbjct: 375 --YAFARERNTEKVK 387
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 213/429 (49%), Gaps = 21/429 (4%)
Query: 120 QWRWAMNIMDDMLR-AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTH 178
+W + + + +LR ++ P +N LI+A G +KEA ++ ++ ++ P T+
Sbjct: 156 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 215
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDT---TTLNIVIHCLVKLR-QYDKAIDIFN 234
+L+ A+ +A M+ H+ P T T N I L+K + ++AID+F
Sbjct: 216 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 275
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
M K+ C P +Y +I+LY + + + M + KP+I +Y ALV A+A
Sbjct: 276 RM--KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 333
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
G+ ++A +F +++++G PD+ Y +L+ +Y R+ P A +F +++ +P+ S
Sbjct: 334 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 393
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
YN ++DAYG GL DA + EM++ GI P + S LL+A + K E ++
Sbjct: 394 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 453
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
G++ +T NS + Y +G++ K + M AD TY ILI + YG
Sbjct: 454 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI------NIYG 507
Query: 475 EALSFMEEMMHLKLPVSKE-------VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDV 527
+A F+E + L + + ++ ++S + AYS++ V+ F M SGC+PD
Sbjct: 508 KA-GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDG 566
Query: 528 VTYTSMLDA 536
T +L A
Sbjct: 567 GTAKVLLSA 575
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 209/444 (47%), Gaps = 7/444 (1%)
Query: 55 LVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
LV +W+ + ++ +N++I + + + +A L+ ++ E R P +TY LI A
Sbjct: 162 LVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 221
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSR---STYNNLINAC-GSSGNWKEALNVCKKMTDNG 170
+ AG A ++ +M + P + YN I GN +EA++V ++M +
Sbjct: 222 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 281
Query: 171 VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
P T+N++++ + S+ + + M+ +P+ T +++ + +KA
Sbjct: 282 CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 341
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
+IF ++E E PDV Y +++ YS +G F++M G +P SYN +V
Sbjct: 342 EIFEQLQEDGLE--PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 399
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
AY G+ +A VF E+K+ G P + S+ LL+AY +++ K + + + N ++P
Sbjct: 400 AYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 459
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
+ N++++ YG G KIL EME ++ + L+ G+ +IE +
Sbjct: 460 DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 519
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+ + + + V + S IG+Y Y K L +++ M D T +L+S +C
Sbjct: 520 VELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS-ACSS 578
Query: 471 SKYGEALSFMEEMMHLKLPVSKEV 494
+ E ++ + MH + VS V
Sbjct: 579 EEQVEQVTSVLRTMHKGVTVSSLV 602
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
+++ + +PD N++I + QY +A ++ + E S P +Y +I Y +
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLE--SRYVPTEDTYALLIKAYCM 224
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVS---YNALV-GAYAAHGMGKEALLVFNEIKQNGFRP 315
+G IE E M + P + YNA + G G +EA+ VF +K++ +P
Sbjct: 225 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKP 284
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
+Y ++N YG++ K + ++ ++ ++ KPN+ +Y AL++A+ GL + A +I
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
++++DG++P+V L+ + R + S Q G + + +YN + +Y
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
G + A +++ M++ I ++ +L+S K + + ++EM + V
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 496 SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+S+L Y + GQ + E M++ C+ D+ TY +++ Y AG
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 510
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 6/311 (1%)
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
+KS PDV+ + +I Y Q + E+ + +L P+ +Y L+ AY G+
Sbjct: 169 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 228
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAY-----GRSQKPQKARGVFEMIKRNKLKPNLV 353
+ A +V E++ + P + T + NAY R ++A VF+ +KR++ KP
Sbjct: 229 ERAEVVLVEMQNHHVSPKTIGVT-VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA 413
+YN +I+ YG + K+ EM +PN+ + L+ A R K E +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 414 QMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
Q G++ + YN+ + SY G A ++ M+ + D +Y I++ + +
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
+A + EEM L + + + + +L AYSK + + E+ M +G PD SM
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 534 LDAYTAAGKMN 544
L+ Y G+
Sbjct: 468 LNLYGRLGQFT 478
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 207/445 (46%), Gaps = 13/445 (2%)
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
T+N L+ + G + ++D +++ + P+ TYN I G A+ + +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI--HC---LV 221
+ G PD++T+N L+ S++ +A Y M + PD+ T N +I +C +V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
+L + +FN PD +Y S+I G+ A FN L +GIKP+
Sbjct: 338 QLAERIVGDAVFNGFV-------PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
++ YN L+ + GM EA + NE+ + G P++ ++ L+N + A G+ +
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
++ P++ ++N LI Y + +++A++IL M +G+ P+V + +LL + S
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+ + +G N +N + S + D+ALGL + M+ K + D+VT+
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 462 ILISGSCKMSKYGEALSFMEEMMH-LKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
LI G CK A + +M K+ S Y+ I+ A++++ + AE F M
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 521 SGCSPDVVTYTSMLDAYTAAGKMNF 545
PD TY M+D + G +N
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNL 655
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 222/517 (42%), Gaps = 11/517 (2%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F L++ L ++G ++ C + + +R YN+ I+ + +D A + +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVI-KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
E KPD TYN LI + +++ A + M+ + P TYN LI G
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+ A + NG PD T+ L+ + ++AL+ F G I+P+ N +
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
I L +A + N M EK P+V ++ +++ G + + + +M+++
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKG--LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G P I ++N L+ Y+ + AL + + + NG PD+ +Y SLLN ++ K +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
++ + PNL ++N L+++ LD+A+ +L EM+ + P+ V+ TL+
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 397 -CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY---LNVGEYDKALGLYKSMRKKK 452
C G + + +T YN I ++ LNV +K L++ M +
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEK---LFQEMVDRC 632
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
+ D TY +++ G CK F+ EMM S ++ + ++ EA
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAY-TAAGKMNFEPL 548
+ M G P+ V +D AA K+ E L
Sbjct: 693 GIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDL 729
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 211/478 (44%), Gaps = 14/478 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN ++ + DQA ++ M++ PD ++ + + + + A+ ++++M
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM- 172
Query: 133 RAAIPPSRSTYNNLINACGSSG-----NWK-EALNVCKKMTDNGVGPDLVTHNILLSAFK 186
S+ N++ C G N+K E + KM +GV L T N LL
Sbjct: 173 -----SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+ + + + P+ T N+ I L + + D A+ + + E+ + PD
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPK--PD 285
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
V++Y ++I+ + + + E M+ EG++P +YN L+ Y GM + A +
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
+ NGF PD +Y SL++ + +A +F +KPN++ YN LI + G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYN 426
++ +A ++ EM + G+ P V + L+ + + ++ +G + +N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 427 SAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHL 486
I Y + + AL + M + D TY L++G CK SK+ + + + M+
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 487 KLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ ++ +L + + ++ EA MK+ +PD VT+ +++D + G ++
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/495 (21%), Positives = 220/495 (44%), Gaps = 15/495 (3%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAE-TYNALINA 114
+F M+ + + Y +I + + + + +M+E E Y +
Sbjct: 26 MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKN 85
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD 174
+GR G+ + A+N+ + M P+ +YN +++ SG + +A V +M D G+ PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD-----KA 229
+ + I + +F S+ AL ++ +N+V +C V Y+ +
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLL-----NNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 230 IDIFNSMREKK-SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
++F M S C + ++ ++ + G ++ CE + ++ G+ P++ +YN
Sbjct: 201 YELFGKMLASGVSLC---LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+ G A+ + + + G +PD+++Y +L+ ++ K Q+A + L
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET 408
+P+ +YN LI Y G++ A +I+ + +G P+ + +L+ + +
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 409 VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
+ + A +GIK N + YN+ I N G +A L M +K + + T+ IL++G C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
KM +A ++ M+ ++ ++ YS Q ++ A ++M +G PDV
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 529 TYTSMLDAYTAAGKM 543
TY S+L+ K
Sbjct: 498 TYNSLLNGLCKTSKF 512
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 160/375 (42%), Gaps = 3/375 (0%)
Query: 171 VGPDLVTHNILLSAFKSGSQYSKALSYFELM-KGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
+GP L+ ++ + K KAL F M K + +T VI L +++
Sbjct: 1 MGPPLLPKHVT-AVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
++ MRE H Y + Y G+++ F M +P++ SYNA++
Sbjct: 60 EEVLVDMRENVGN-HMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIM 118
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK 349
G +A V+ ++ G PD+ S+T + ++ ++ +P A + + +
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCE 178
Query: 350 PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETV 409
N+V+Y ++ + + ++ +M G+ + + LL + + E +
Sbjct: 179 MNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 410 LSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
L RG+ N YN I GE D A+ + + ++ K D +TY LI G CK
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
SK+ EA ++ +M++ L Y++++ Y K G + AE +G PD T
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 530 YTSMLDAYTAAGKMN 544
Y S++D G+ N
Sbjct: 359 YRSLIDGLCHEGETN 373
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 213/429 (49%), Gaps = 21/429 (4%)
Query: 120 QWRWAMNIMDDMLR-AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTH 178
+W + + + +LR ++ P +N LI+A G +KEA ++ ++ ++ P T+
Sbjct: 134 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 193
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDT---TTLNIVIHCLVKLR-QYDKAIDIFN 234
+L+ A+ +A M+ H+ P T T N I L+K + ++AID+F
Sbjct: 194 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 253
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
M K+ C P +Y +I+LY + + + M + KP+I +Y ALV A+A
Sbjct: 254 RM--KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
G+ ++A +F +++++G PD+ Y +L+ +Y R+ P A +F +++ +P+ S
Sbjct: 312 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 371
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
YN ++DAYG GL DA + EM++ GI P + S LL+A + K E ++
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
G++ +T NS + Y +G++ K + M AD TY ILI + YG
Sbjct: 432 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI------NIYG 485
Query: 475 EALSFMEEMMHLKLPVSKE-------VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDV 527
+A F+E + L + + ++ ++S + AYS++ V+ F M SGC+PD
Sbjct: 486 KA-GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDG 544
Query: 528 VTYTSMLDA 536
T +L A
Sbjct: 545 GTAKVLLSA 553
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 209/444 (47%), Gaps = 7/444 (1%)
Query: 55 LVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
LV +W+ + ++ +N++I + + + +A L+ ++ E R P +TY LI A
Sbjct: 140 LVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 199
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSR---STYNNLINAC-GSSGNWKEALNVCKKMTDNG 170
+ AG A ++ +M + P + YN I GN +EA++V ++M +
Sbjct: 200 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 259
Query: 171 VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
P T+N++++ + S+ + + M+ +P+ T +++ + +KA
Sbjct: 260 CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 319
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
+IF ++E E PDV Y +++ YS +G F++M G +P SYN +V
Sbjct: 320 EIFEQLQEDGLE--PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 377
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
AY G+ +A VF E+K+ G P + S+ LL+AY +++ K + + + N ++P
Sbjct: 378 AYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 437
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
+ N++++ YG G KIL EME ++ + L+ G+ +IE +
Sbjct: 438 DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 497
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+ + + + V + S IG+Y Y K L +++ M D T +L+S +C
Sbjct: 498 VELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS-ACSS 556
Query: 471 SKYGEALSFMEEMMHLKLPVSKEV 494
+ E ++ + MH + VS V
Sbjct: 557 EEQVEQVTSVLRTMHKGVTVSSLV 580
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
+++ + +PD N++I + QY +A ++ + E S P +Y +I Y +
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLE--SRYVPTEDTYALLIKAYCM 202
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVS---YNALV-GAYAAHGMGKEALLVFNEIKQNGFRP 315
+G IE E M + P + YNA + G G +EA+ VF +K++ +P
Sbjct: 203 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKP 262
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
+Y ++N YG++ K + ++ ++ ++ KPN+ +Y AL++A+ GL + A +I
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
++++DG++P+V L+ + R + S Q G + + +YN + +Y
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
G + A +++ M++ I ++ +L+S K + + ++EM + V
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 496 SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+S+L Y + GQ + E M++ C+ D+ TY +++ Y AG
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 488
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 6/311 (1%)
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
+KS PDV+ + +I Y Q + E+ + +L P+ +Y L+ AY G+
Sbjct: 147 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 206
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAY-----GRSQKPQKARGVFEMIKRNKLKPNLV 353
+ A +V E++ + P + T + NAY R ++A VF+ +KR++ KP
Sbjct: 207 ERAEVVLVEMQNHHVSPKTIGVT-VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA 413
+YN +I+ YG + K+ EM +PN+ + L+ A R K E +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 414 QMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
Q G++ + YN+ + SY G A ++ M+ + D +Y I++ + +
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
+A + EEM L + + + + +L AYSK + + E+ M +G PD SM
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 534 LDAYTAAGKMN 544
L+ Y G+
Sbjct: 446 LNLYGRLGQFT 456
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 229/505 (45%), Gaps = 5/505 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
+ K L+ +G ++ + M+ + + YN +I L + +A ++ M
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMR-EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
+P +TY++L+ G+ M ++ +M + P+ T+ I G +G EA
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ K+M D G GPD+VT+ +L+ A + + A FE MK +PD T ++
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
R D ++ F S EK PDVV++T ++ +G ++M +GI
Sbjct: 338 FSDNRDLD-SVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 280 PSIVSYNALV-GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
P++ +YN L+ G H + +AL +F ++ G +P +Y ++ YG+S A
Sbjct: 396 PNLHTYNTLICGLLRVHRL-DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
FE +K + PN+V+ NA + + G +A +I ++ G+ P+ V+ ++
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ + + +LS G + + + NS I + D+A ++ M++ K+K V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
TY L++G K K EA+ E M+ P + ++++ K ++ A M
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 519 KSSGCSPDVVTYTSMLDAYTAAGKM 543
GC PDV TY +++ G++
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQV 659
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 227/509 (44%), Gaps = 41/509 (8%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+ N +I + +R+D+A +F M+E + KP TYN L+ G+ G+ + A+ + + M
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
++ PP+ T+N L + + AL + KM D G PD+ T+N ++ Q
Sbjct: 600 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A+ +F MK + PD TL ++ +VK + A I + ++ P + +
Sbjct: 660 KEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCAD-QPANLFWE 717
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGI--------------------------------- 278
+I I+N + ++A GI
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 279 ----KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQ 334
+P + +YN L+G M + A VF ++K G PD+ +Y LL+AYG+S K
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD-GIQPNVVSICTL 393
+ +++ + ++ + N +++N +I G +DDA+ + ++ D P + L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ + + + + + G + N YN I + GE D A L+K M K+ +
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ D TY++L+ C + + E L + +E+ L Y+ I+ K ++ EA
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 514 TFNLMKSS-GCSPDVVTYTSMLDAYTAAG 541
FN MK+S G +PD+ TY S++ AG
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 229/498 (45%), Gaps = 5/498 (1%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARN-DIYNMMIRLHARHNRIDQARGLFFEMQ 97
++++ L G +E VF M Q+ R+ + Y + + + + QA +M+
Sbjct: 123 YMLEALRVDGKLEEMAYVFDLM--QKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR 180
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
E+ +A +YN LI+ ++ AM + M+ PS TY++L+ G +
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID 240
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
+ + K+M G+ P++ T I + + ++A + M PD T ++I
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
L R+ D A ++F M+ + + PD V+Y +++ +S + +++ + ++ M +G
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHK--PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
P +V++ LV A G EA + ++ G P++ +Y +L+ R + A
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+F ++ +KP +Y ID YG +G A++ +M+ GI PN+V+ L +
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ + + + + + G+ ++V YN + Y VGE D+A+ L M + + D
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
+ LI+ K + EA M +KL + Y+++L K G+I EA F
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 518 MKSSGCSPDVVTYTSMLD 535
M GC P+ +T+ ++ D
Sbjct: 599 MVQKGCPPNTITFNTLFD 616
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 209/468 (44%), Gaps = 38/468 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+ + IR+ R +I++A + M + C PD TY LI+A A + A + + M
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P R TY L++ + + +M +G PD+VT IL+ A +
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A ++M+ I P+ T N +I L+++ + D A+++F +M + P +Y
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK--PTAYTYIV 438
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
I Y SG + F M +GI P+IV+ NA + + A G +EA +F +K G
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PD V+Y ++ Y + + +A + + N +P+++ N+LI+ +D+A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
K+ M++ ++P VV+ TLLA G+ GKI+
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGK---NGKIQ------------------------- 590
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
+A+ L++ M +K +++T+ L CK + AL + +MM +
Sbjct: 591 -------EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
Y++I+ K GQ+ EA F+ MK PD VT ++L A
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKA 690
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 212/482 (43%), Gaps = 8/482 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YNMM++ +++ ID+A L EM E C+PD N+LIN +A + A + M
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P+ TYN L+ G +G +EA+ + + M G P+ +T N L + +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
AL M PD T N +I LVK Q +A+ F+ M K +PD V+ +
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM---KKLVYPDFVTLCT 682
Query: 253 IIHLYSVSGQIENC-EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++ + IE+ + N + +P+ + + L+G+ A A+ + N
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 312 GFRPDIVSYTSLLNAYG-RSQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAYGSNGLLD 369
G D S + Y + AR +FE ++ ++P L +YN LI +++
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
A + +++ G P+V + LL A G+ + ++ + + NT+ +N I
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 430 GSYLNVGEYDKALGLYKS-MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
+ G D AL LY M + + TY LI G K + EA E M+
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPL 548
+ +Y+ ++ + K G+ A + F M G PD+ TY+ ++D G+++ E L
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD-EGL 981
Query: 549 KY 550
Y
Sbjct: 982 HY 983
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 162/326 (49%), Gaps = 7/326 (2%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARN-DIYNMMIRLHARHNRIDQARGLFF 94
+ LI L + IE VF +K+ C + YN ++ + + +ID+ L+
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTG--CIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA-IPPSRSTYNNLINACGSS 153
EM C+ + T+N +I+ +AG A+++ D++ P+ TY LI+ S
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
G EA + + M D G P+ +NIL++ F + A + F+ M +RPD T
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN-M 272
++++ CL + + D+ + F ++E S +PDVV Y II+ S ++E FN M
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKE--SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
+ GI P + +YN+L+ GM +EA ++NEI++ G P++ ++ +L+ Y S K
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNAL 358
P+ A V++ + PN +Y L
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 192/440 (43%), Gaps = 37/440 (8%)
Query: 105 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCK 164
ET N ++ A G+ + D M + I +TY + + G K+A +
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 165 KMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
KM + G +L+A+ SY N +IH L+K R
Sbjct: 178 KMREFG---------FVLNAY----------SY----------------NGLIHLLLKSR 202
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS 284
+A++++ M + P + +Y+S++ I++ M G+KP++ +
Sbjct: 203 FCTEAMEVYRRMILEGF--RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
+ + G EA + + G PD+V+YT L++A ++K A+ VFE +K
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
+ KP+ V+Y L+D + N LD + EME+DG P+VV+ L+ A + G
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+ L + +GI N YN+ I L V D AL L+ +M +K + TY + I
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
K AL E+M + + ++ L + +K G+ EA+ F +K G
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 525 PDVVTYTSMLDAYTAAGKMN 544
PD VTY M+ Y+ G+++
Sbjct: 501 PDSVTYNMMMKCYSKVGEID 520
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 147/292 (50%), Gaps = 5/292 (1%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFF 94
+ FL+ + G I+ +++ M C N I +N++I + +D A L++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHE--CEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 95 EMQEWR-CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 153
++ R P A TY LI+ ++G+ A + + ML P+ + YN LIN G +
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
G A + K+M GV PDL T+++L+ + + L YF+ +K + + PD
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N++I+ L K + ++A+ +FN M+ + PD+ +Y S+I ++G +E +N +
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRG-ITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
G++P++ ++NAL+ Y+ G + A V+ + GF P+ +Y L N
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 115/536 (21%), Positives = 224/536 (41%), Gaps = 48/536 (8%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQE 98
L+ L + G I+ +F+ M + C N I +N + +++ + A + F+M +
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKG--CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP--------------------- 137
C PD TYN +I + GQ + AM M + P
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDA 696
Query: 138 --------------PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
P+ + +LI + + A++ +++ NG+ D +IL+
Sbjct: 697 YKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD--GDSILVP 754
Query: 184 AFKSGSQY---SKALSYFE-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
+ ++ S A + FE K ++P T N++I L++ + A D+F ++ K
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF--LQVK 812
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
+ C PDV +Y ++ Y SG+I+ + M + + +++N ++ G
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 300 EAL-LVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
+AL L ++ + F P +Y L++ +S + +A+ +FE + +PN YN L
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
I+ +G G D A + + M ++G++P++ + L+ + + + G+
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK-IKADSVTYTILISGSCKMSKYGEAL 477
+ V YN I ++AL L+ M+ + I D TY LI EA
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 478 SFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
E+ L + +++++ YS G+ A + + M + G SP+ TY +
Sbjct: 1053 KIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 221/483 (45%), Gaps = 7/483 (1%)
Query: 63 QRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
+RN Y +++ +D A + EM C+P+ Y LI + ++
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
AM ++ +M I P YN+LI + EA + +M +NG+ P+ T+ +
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE 242
S + S+++ A Y + M+ + P+ +I+ K + +A + SM ++
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG-- 587
Query: 243 CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEAL 302
D +YT +++ + ++++ E F M +GI P + SY L+ ++ G ++A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 303 LVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAY 362
+F+E+ + G P+++ Y LL + RS + +KA+ + + + L PN V+Y +ID Y
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
+G L +A ++ EM+ G+ P+ TL+ C R + + T+ + +G +T
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASST 766
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKI----KADSVTYTILISGSCKMSKYGEALS 478
+N+ I G+ + + + K + VTY I+I CK A
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
+M + L + Y+S+L Y K G+ E F+ ++G PD + Y+ +++A+
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886
Query: 539 AAG 541
G
Sbjct: 887 KEG 889
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 224/509 (44%), Gaps = 40/509 (7%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+Y+ I + ++ +++A+ LF M P A+ Y +LI + R R ++ +M
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I S TY ++ SSG+ A N+ K+M +G P++V + L+ F S++
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A+ + MK I PD N +I L K ++ D+A M E + P+ +Y
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE--NGLKPNAFTYG 526
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+ I Y + + + + M G+ P+ V L+ Y G EA + +
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G D +YT L+N ++ K A +F ++ + P++ SY LI+ + G + A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
I EM ++G+ PNV+ LL R + K + +L ++G+ N V Y + I
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS-------------------- 471
Y G+ +A L+ M+ K + DS YT L+ G C+++
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASST 766
Query: 472 -----------KYG------EALSFMEEMMHLKLPVSKEVYSSILCAY-SKQGQIVEAES 513
K+G E L+ + + + +V +I+ Y K+G + A+
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
F+ M+++ P V+TYTS+L+ Y G+
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 143/549 (26%), Positives = 237/549 (43%), Gaps = 61/549 (11%)
Query: 20 DIDG---LLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQ----RNYCAR 69
D+DG ++ + R N + LIK Q V + MK Q +C
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC-- 489
Query: 70 NDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMD 129
YN +I ++ R+D+AR EM E KP+A TY A I+ + A ++ A +
Sbjct: 490 ---YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 130 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGS 189
+M + P++ LIN G EA + + M D G+ D T+ +L++
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 190 QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
+ A F M+G I PD + ++I+ KL KA IF+ M E+ P+V+
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVII 664
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
Y ++ + SG+IE + + M +G+ P+ V+Y ++ Y G EA +F+E+K
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR------------------------ 345
G PD YT+L++ R ++A +F K+
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 346 -----NKL---------KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
N+L KPN V+YN +ID G L+ A ++ +M+ + P V++
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
+LL + ++ ++ V A GI+ + + Y+ I ++L G KAL L M K
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 452 KIKADSVTYTI-----LISGSCKMSKYGEALSFMEEMMHLK-LPVSKEVYSSILCAYSKQ 505
D +I L+SG K+ + A ME M+ L+ +P S V I +
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISS 964
Query: 506 GQIVEAEST 514
Q VEA++
Sbjct: 965 NQRVEADAV 973
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 220/505 (43%), Gaps = 29/505 (5%)
Query: 63 QRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQ-EWR-----------------CK-- 102
+RN Y+M+I H R + + + F+ + E+R CK
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273
Query: 103 -PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
P TY+ LI+ + + A +++ +M + TY+ LI+ N A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+ +M +G+ ++ + KA + F+ M + + P +I
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
+ + + ++ M+++ P +Y +++ SG ++ M+A G +P+
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+V Y L+ + + +A+ V E+K+ G PDI Y SL+ ++++ +AR
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ N LKPN +Y A I Y A K ++EM + G+ PN V +CT L
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV-LCTGLI--NEYC 568
Query: 402 QKGKIETVLSAAQM---RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+KGK+ SA + +GI + Y + + D A +++ MR K I D
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
+Y +LI+G K+ +A S +EM+ L + +Y+ +L + + G+I +A+ + M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 519 KSSGCSPDVVTYTSMLDAYTAAGKM 543
G P+ VTY +++D Y +G +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDL 713
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 200/462 (43%), Gaps = 16/462 (3%)
Query: 82 RHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS 141
R NR+D ++ M E D +TY+ LI AH RAG + +++ +
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL-------FKTEKE 250
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
+N G AL + + M G+ P T+++L+ + A S M
Sbjct: 251 FRTATLNVDG-------ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
+ D T +++I L+K R D A + + M P + Y I + S G
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEG 361
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+E +A F+ M+A G+ P +Y +L+ Y ++ + E+K+ +Y
Sbjct: 362 VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+++ S A + + + + +PN+V Y LI + N DA+++L+EM++
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
GI P++ +L+ + + + + L G+K N Y + I Y+ E+ A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
K MR+ + + V T LI+ CK K EA S M+ + + Y+ ++
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
K ++ +AE F M+ G +PDV +Y +++ ++ G M
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 193/464 (41%), Gaps = 2/464 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y+++I + R++ A+ L EM D TY+ LI+ + A ++ +M+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I Y+ I G ++A + M +G+ P + L+ +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+ MK +I T V+ + D A +I M S C P+VV YT+
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM--IASGCRPNVVIYTT 457
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + + + + M +GI P I YN+L+ + EA E+ +NG
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
+P+ +Y + ++ Y + + A + ++ + PN V LI+ Y G + +A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
R M GI + + L+ + + E + + +GI + +Y I +
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
+G KA ++ M ++ + + + Y +L+ G C+ + +A ++EM L +
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
Y +I+ Y K G + EA F+ MK G PD YT+++D
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 169/435 (38%), Gaps = 85/435 (19%)
Query: 154 GNWKEALNVCKKMTDN-------------------GVGPDLVTHNILLSAFKSGSQYSKA 194
G++++AL+V ++M + G D V IL + + +A
Sbjct: 111 GSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEA 170
Query: 195 LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII 254
+ F G + P + +++ L++ + D D++ M E+ DV +Y +I
Sbjct: 171 VFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN--VVFDVKTYHMLI 228
Query: 255 HLYSVSGQIE------------------NCEAAFNM---MLAEGIKPSIVSYNALVGAYA 293
+ +G ++ N + A + M+ +G+ P +Y+ L+
Sbjct: 229 IAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 294 AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG-VFEMIKRN-KLKPN 351
++A + E+ G D +Y+ L++ + + A+G V EM+ +KP
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE--TV 409
+ Y+ I G+++ A + M G+ P + +L+ G C +K + +
Sbjct: 349 M--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE--GYCREKNVRQGYEL 404
Query: 410 LSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
L + R I ++ Y + + + G+ D A + K M + + V YT LI +
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
S++G+A+ ++EM K G +PD+
Sbjct: 465 NSRFGDAMRVLKEM-----------------------------------KEQGIAPDIFC 489
Query: 530 YTSMLDAYTAAGKMN 544
Y S++ + A +M+
Sbjct: 490 YNSLIIGLSKAKRMD 504
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 246/552 (44%), Gaps = 44/552 (7%)
Query: 12 VLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARND 71
V S Y +D N+ +G F R N P + L ++ I L +
Sbjct: 98 VRSRPFYTAVD--CNKVIGVFVRMNRPDVAISLYRKMEIRRIPL---------------N 140
Query: 72 IY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW------ 123
IY N++I+ +++ + F ++ + +PD T+N L+ HG + R
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL--HGLCLEDRISEALAL 198
Query: 124 -----------AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG 172
A+ + D M+ + P T+N LIN G EA + KM G+
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 258
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
D+VT+ +++ AL+ M+ THI+PD + +I L K + A +
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
F+ M EK P+V +Y +I + G+ + + M+ I P ++++NAL+ A
Sbjct: 319 FSEMLEKGIA--PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
G EA + +E+ PD V+Y S++ + + + A+ +F+++ P++
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDV 432
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
V++N +ID Y +D+ +++LRE+ + G+ N + TL+ + +
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
G+ +T+ N + + + ++AL L++ ++ KI D+V Y I+I G CK SK
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
EA + + + Y+ ++ + + I +A F+ MK +G PD TY +
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 533 MLDAYTAAGKMN 544
++ AG+++
Sbjct: 613 LIRGCLKAGEID 624
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 222/496 (44%), Gaps = 22/496 (4%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F +M R + D N +I + R NR D A L+ +M+ R + ++N LI
Sbjct: 94 FDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC------------- 163
+ ++++ + + P T+N L++ EAL +
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212
Query: 164 --KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+M + G+ P ++T N L++ + +A + M G + D T +++ +
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K+ A+++ + M E + PDVV Y++II G + + F+ ML +GI P+
Sbjct: 273 KMGDTKSALNLLSKMEE--THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+ +YN ++ + + G +A + ++ + PD++++ +L++A + K +A + +
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ + P+ V+YN++I + + DDA + M P+VV+ T++ R
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAK 446
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+ + +L RG+ NT YN+ I + V + A L++ M + D++T
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
IL+ G C+ K EAL E + K+ + Y+ I+ K ++ EA F +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 522 GCSPDVVTYTSMLDAY 537
G PDV TY M+ +
Sbjct: 567 GVEPDVQTYNVMISGF 582
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 205/445 (46%), Gaps = 12/445 (2%)
Query: 88 QARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 147
+A LF +M E P T+N LIN G+ A +++ M+ + TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
N G+ K ALN+ KM + + PD+V ++ ++ +S A F M I
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
P+ T N +I ++ A + M E+ E +PDV+++ ++I G++ E
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER--EINPDVLTFNALISASVKEGKLFEAE 386
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
+ ML I P V+YN+++ + H +A +F+ + PD+V++ ++++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVY 442
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
R+++ + + I R L N +YN LI + L+ A + +EM G+ P+
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 388 VSICTLLAACGRCSQKGKIETVLS---AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
++ LL G C + K+E L QM I L+TVAYN I + D+A L
Sbjct: 503 ITCNILLY--GFCENE-KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ S+ ++ D TY ++ISG C S +A +M Y++++ K
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVT 529
G+I ++ + M+S+G S D T
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFT 644
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 182/384 (47%), Gaps = 8/384 (2%)
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 148
A L +M+E KPD Y+A+I+ + G A + +ML I P+ TYN +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 149 ACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRP 208
S G W +A + + M + + PD++T N L+SA + +A + M I P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
DT T N +I+ K ++D A +F+ M PDVV++ +II +Y + +++
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS------PDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
+ G+ + +YN L+ + A +F E+ +G PD ++ LL +
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
++K ++A +FE+I+ +K+ + V+YN +I +D+A + + G++P+V
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 389 SICTLLAA-CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
+ +++ CG+ S + + G + + YN+ I L GE DK++ L
Sbjct: 574 TYNVMISGFCGK-SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 448 MRKKKIKADSVTYTILISGSCKMS 471
MR D+ T + C++S
Sbjct: 633 MRSNGFSGDAFTIKMAEEIICRVS 656
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 209/463 (45%), Gaps = 27/463 (5%)
Query: 94 FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 153
FE +E + K + + +L +A ++ D M+R+ + N +I
Sbjct: 70 FEGEELKLKSGSHYFKSLDDA----------IDFFDYMVRSRPFYTAVDCNKVIGVFVRM 119
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
A+++ +KM + ++ + NIL+ F + S +LS F + +PD T
Sbjct: 120 NRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTF 179
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREK-------------KSECHPDVVSYTSIIHLYSVS 260
N ++H L + +A+ +F M E + P V+++ ++I+ +
Sbjct: 180 NTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G++ A N M+ +G+ +V+Y +V G K AL + +++++ +PD+V Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
+++++ + A+ +F + + PN+ +YN +ID + S G DA ++LR+M +
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
I P+V++ L++A + + + E + R I +TV YNS I + +D
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A ++ M D VT+ +I C+ + E + + E+ L + Y++++
Sbjct: 420 AKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ + + A+ F M S G PD +T +L + K+
Sbjct: 476 GFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 6/244 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN MI +HNR D A+ +F + PD T+N +I+ + RA + M ++ ++
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R + + +TYN LI+ N A ++ ++M +GV PD +T NILL F +
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+AL FE+++ + I DT NI+IH + K + D+A D+F S+ E PDV +Y
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE--PDVQTYNV 577
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + I + F+ M G +P +YN L+ G +++ + +E++ NG
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 313 FRPD 316
F D
Sbjct: 638 FSGD 641
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 157/374 (41%), Gaps = 41/374 (10%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IY+ +I + A+ LF EM E P+ TYN +I+ G+W A ++ DM
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I P T+N LI+A G EA +C +M + PD VT+N ++ F +++
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A F+LM PD T N +I + ++ D+ + + + + + +Y
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG--LVANTTTYN 471
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA----------------- 294
++IH + + + F M++ G+ P ++ N L+ +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 295 -------------HGMGK-----EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
HGM K EA +F + +G PD+ +Y +++ + A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
+F +K N +P+ +YN LI G +D +I+++ EM +G + +I
Sbjct: 592 NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEI 651
Query: 397 CGRCSQKGKIETVL 410
R S + IE L
Sbjct: 652 ICRVSDEEIIENYL 665
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 62 NQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
++R A YN +I + ++ A+ LF EM PD T N L+ +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
A+ + + + + I YN +I+ EA ++ + +GV PD+ T+N++
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
+S F S S A F MK PD +T N +I +K + DK+I++ + MR
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 246/509 (48%), Gaps = 10/509 (1%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQE 98
F++ L++ + + W+ + Y YN+++R R + D A GLF EM++
Sbjct: 124 FMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQ 183
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 158
PD TY+ LI + G+ G + A++ + M + + Y+NLI ++ +
Sbjct: 184 RALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSK 243
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
A+++ ++ +G+ PDLV +N +++ + + +A + M + P+T + + ++
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
V+ ++ +A+ +F M+E C D+ + +I +Y ++ + F + I
Sbjct: 304 VYVENHKFLEALSVFAEMKE--VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
+P++VSYN ++ Y + EA+ +F +++ ++V+Y +++ YG++ + +KA
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 421
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+ + ++ ++PN ++Y+ +I +G G LD A + +++ G++ + V T++ A
Sbjct: 422 LVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYE 481
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
R G + +L ++ + + +AI G ++A +++ + D
Sbjct: 482 RVGLMGHAKRLLHELKLP----DNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS 537
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
+ +I+ + +Y + E+M V + +L AY KQ + +A++ + M
Sbjct: 538 VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
Query: 519 KSSGCS-PDVVTYTSMLDAYTAAGKMNFE 546
+ GC PD V + ML Y++ K +FE
Sbjct: 598 QEEGCVFPDEVHF-QMLSLYSS--KKDFE 623
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 223/497 (44%), Gaps = 65/497 (13%)
Query: 99 WRCKPDAETYNAL--INAHGRAGQWRWAMNIMD-DMLRAAIPPSR---------STYNN- 145
WR +P+ T ++ + H R + + + +D D L A+I ++ STY +
Sbjct: 59 WRKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDR 118
Query: 146 ------LINACGSSGNWKEALNVCKKMTDNG-VGPDLVTHNILLSAFKSGSQYSKALSYF 198
+++ +W+ +L + + + P + +N++L Q+ A F
Sbjct: 119 QLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLF 178
Query: 199 ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYS 258
+ M+ + PD T + +I K +D A+ M + + D+V Y+++I L
Sbjct: 179 DEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDR--VSGDLVLYSNLIELSR 236
Query: 259 VSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIV 318
+ F+ + GI P +V+YN+++ Y + +EA L+ E+ + G P+ V
Sbjct: 237 RLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 296
Query: 319 SYTSLLNAYGRSQKPQKARGVF-EM----------------------------------I 343
SY++LL+ Y + K +A VF EM +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
++ ++PN+VSYN ++ YG L +AI + R M++ I+ NVV+ T++ G+ +
Sbjct: 357 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 416
Query: 404 GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
K ++ Q RGI+ N + Y++ I + G+ D+A L++ +R ++ D V Y +
Sbjct: 417 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 476
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLP--VSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
I ++ G A + E LKLP + +E +IL +K G+ EA F S
Sbjct: 477 IVAYERVGLMGHAKRLLHE---LKLPDNIPRETAITIL---AKAGRTEEATWVFRQAFES 530
Query: 522 GCSPDVVTYTSMLDAYT 538
G D+ + M++ Y+
Sbjct: 531 GEVKDISVFGCMINLYS 547
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 218/508 (42%), Gaps = 46/508 (9%)
Query: 56 VFQWM--KNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALIN 113
VF M K +R C I + +++ + + +A LF E +E D YN +
Sbjct: 348 VFNKMLKKRKRINCV---IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 114 AHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP 173
A G+ G+ A+ + +M I P Y LI C G +A ++ +M G P
Sbjct: 405 ALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP 464
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
D+V +N+L + +A ++M+ ++P T N+VI L+ + DKA +
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 234 NSMREKKSE---------CH------------------PDVVSYTSIIHLYSVSGQIENC 266
S+ K E C P V +T L + I
Sbjct: 525 ESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKA 584
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
+ + M G++P Y L+GA+ ++A F + PD+ +YT ++N
Sbjct: 585 QDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINT 644
Query: 327 YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
Y R +P++A +FE +KR +KP++V+Y+ L+++ D + + REME + P+
Sbjct: 645 YCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPD 697
Query: 387 VVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYK 446
VV ++ + K+ + + R I + V Y + + L +
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSR 750
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQG 506
M+ +K D YT+LI CK+ GEA ++M+ + Y++++ K G
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 507 QIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ EA+ F+ M SG PDVV YT+++
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALI 838
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 180/416 (43%), Gaps = 49/416 (11%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A +++ DM + I P Y+ +I + N +A++V KM + V + +L
Sbjct: 310 AESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQ 369
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
+ +S+A F+ + T+I D N+ L KL + ++AI++F M K
Sbjct: 370 CYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG--I 427
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMML---AEGIKPSIVSYNALVGAYAAHGMGKE 300
PDV++YT++I + G+ C AF++M+ G P IV YN L G A +G+ +E
Sbjct: 428 APDVINYTTLIGGCCLQGK---CSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQE 484
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
A ++ G +P V++ ++ + + KA +E ++ +K + N S ++
Sbjct: 485 AFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE-HKSRENDAS---MVK 540
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
+ + G LD A + R + + P V + C K + +L G++
Sbjct: 541 GFCAAGCLDHAFE--RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM 480
Y IG++ V KA ++ + KKI D TYTI+I+ C++++ +A +
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALF 658
Query: 481 EEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
E+ MK PDVVTY+ +L++
Sbjct: 659 ED-----------------------------------MKRRDVKPDVVTYSVLLNS 679
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 19/358 (5%)
Query: 33 ARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGL 92
+R+N ++K G ++H F+ ++ + + L A + I +A+ L
Sbjct: 531 SRENDASMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDL 587
Query: 93 FFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGS 152
M + +P+ Y LI A R R A + ++ I P TY +IN
Sbjct: 588 LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Query: 153 SGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTT 212
K+A + + M V PD+VT+++LL++ L M+ + PD
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVY 700
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
I+I+ L K +F M K+ E PDVV+YT ++ + AF+
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDM--KRREIVPDVVTYTVLLK-NKPERNLSREMKAFD- 756
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
+KP + Y L+ G EA +F+++ ++G PD YT+L+ +
Sbjct: 757 -----VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGY 811
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
++A+ +F+ + + +KP++V Y ALI NG + A+K+++EM + GI+P S+
Sbjct: 812 LKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASL 869
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 170/386 (44%), Gaps = 30/386 (7%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+NM+I +D+A F+E E + + E +++ AG A + +
Sbjct: 504 HNMVIEGLIDAGELDKAEA-FYESLEHKSR---ENDASMVKGFCAAGCLDHAF---ERFI 556
Query: 133 RAAIPPSRSTYNNLINA-CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
R P +S Y L + C +A ++ +M GV P+ + L+ A+ +
Sbjct: 557 RLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNV 616
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
KA +FE++ I PD T I+I+ +L + +A +F M K+ + PDVV+Y+
Sbjct: 617 RKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM--KRRDVKPDVVTYS 674
Query: 252 SIIHLYSVSGQIENCEAAFNM---MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
++ N + +M M A + P +V Y ++ Y K+ +F ++
Sbjct: 675 VLL----------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
K+ PD+V+YT LL KP+ R + +K +KP++ Y LID G L
Sbjct: 725 KRREIVPDVVTYTVLLK-----NKPE--RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDL 777
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+A +I +M + G+ P+ L+A C + + + + G+K + V Y +
Sbjct: 778 GEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIK 454
I G KA+ L K M +K IK
Sbjct: 838 IAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 18/288 (6%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+Y +I R N + +AR F + + PD TY +IN + R + + A + +DM
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
R + P TY+ L+N+ L++ ++M V PD+V + I+++ + +
Sbjct: 662 KRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDL 714
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS-ECHPDVVSY 250
K + F+ MK I PD T +++ K N RE K+ + PDV Y
Sbjct: 715 KKVYALFKDMKRREIVPDVVTYTVLL----------KNKPERNLSREMKAFDVKPDVFYY 764
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T +I G + + F+ M+ G+ P Y AL+ G KEA ++F+ + +
Sbjct: 765 TVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE 824
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
+G +PD+V YT+L+ R+ KA + + + +KP S +A+
Sbjct: 825 SGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 199/500 (39%), Gaps = 76/500 (15%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N +I R D G F+E++ DA TY ++ A WR DD
Sbjct: 186 NFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQA-----LWR-----NDDKEE 235
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
SR + N C N+ E L + +MTD
Sbjct: 236 LEKLLSRLLISETRNPCVFYLNFIEGLCL-NQMTD------------------------- 269
Query: 194 ALSYFEL--MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS--MREKKSECHPDVVS 249
++YF L ++ +I D + L I +V+ Y+ I+ S + +K PDV
Sbjct: 270 -IAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYV 328
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
Y++II + + I FN ML + + + V ++++ Y G EA +F E +
Sbjct: 329 YSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFR 388
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
+ D V Y +A G+ K ++A +F + + P++++Y LI G
Sbjct: 389 ETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCS 448
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM---RGIKLNTVAYN 426
DA ++ EM+ G P++V I +LA G + G + +M RG+K V +N
Sbjct: 449 DAFDLMIEMDGTGKTPDIV-IYNVLA--GGLATNGLAQEAFETLKMMENRGVKPTYVTHN 505
Query: 427 SAIGSYLNVGEYDKALGLYKSMRKKKIKAD-----------------------------S 457
I ++ GE DKA Y+S+ K + D S
Sbjct: 506 MVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKS 565
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
V +T+ S + +A ++ M L + K +Y ++ A+ + + +A F +
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 518 MKSSGCSPDVVTYTSMLDAY 537
+ + PD+ TYT M++ Y
Sbjct: 626 LVTKKIVPDLFTYTIMINTY 645
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 4/283 (1%)
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
E + F + G P I + N L+ A G + F EI++ G D +Y +
Sbjct: 164 EAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLV 223
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
+ A R+ ++ + + ++ + V Y I+ N + D A +L+ + I
Sbjct: 224 VQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANI 283
Query: 384 --QPNVVSICTLLAACGRCSQK--GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+ + I G C + E+V+ + GI + Y++ I +
Sbjct: 284 LVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIP 343
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
KA+ ++ M KK+ + + V + ++ C+M + EA +E + + + Y+
Sbjct: 344 KAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAF 403
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
A K G++ EA F M G +PDV+ YT+++ GK
Sbjct: 404 DALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGK 446
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 90 RGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINA 149
R L EM+ + KPD Y LI+ + G A I D M+ + + P + Y LI
Sbjct: 746 RNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIAC 805
Query: 150 CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPD 209
C G KEA + +M ++GV PD+V + L++ KA+ + M I+P
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 210 TTTLNIVIHCLVK 222
+L+ V + +K
Sbjct: 866 KASLSAVHYAKLK 878
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 246/552 (44%), Gaps = 44/552 (7%)
Query: 12 VLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARND 71
V S Y +D N+ +G F R N P + L ++ I L +
Sbjct: 98 VRSRPFYTAVD--CNKVIGVFVRMNRPDVAISLYRKMEIRRIPL---------------N 140
Query: 72 IY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW------ 123
IY N++I+ +++ + F ++ + +PD T+N L+ HG + R
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL--HGLCLEDRISEALAL 198
Query: 124 -----------AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG 172
A+ + D M+ + P T+N LIN G EA + KM G+
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 258
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
D+VT+ +++ AL+ M+ THI+PD + +I L K + A +
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
F+ M EK P+V +Y +I + G+ + + M+ I P ++++NAL+ A
Sbjct: 319 FSEMLEKGIA--PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
G EA + +E+ PD V+Y S++ + + + A+ +F+++ P++
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDV 432
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
V++N +ID Y +D+ +++LRE+ + G+ N + TL+ + +
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
G+ +T+ N + + + ++AL L++ ++ KI D+V Y I+I G CK SK
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
EA + + + Y+ ++ + + I +A F+ MK +G PD TY +
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 533 MLDAYTAAGKMN 544
++ AG+++
Sbjct: 613 LIRGCLKAGEID 624
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 222/496 (44%), Gaps = 22/496 (4%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F +M R + D N +I + R NR D A L+ +M+ R + ++N LI
Sbjct: 94 FDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFC 152
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC------------- 163
+ ++++ + + P T+N L++ EAL +
Sbjct: 153 DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA 212
Query: 164 --KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+M + G+ P ++T N L++ + +A + M G + D T +++ +
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K+ A+++ + M E + PDVV Y++II G + + F+ ML +GI P+
Sbjct: 273 KMGDTKSALNLLSKMEE--THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+ +YN ++ + + G +A + ++ + PD++++ +L++A + K +A + +
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 390
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ + P+ V+YN++I + + DDA + M P+VV+ T++ R
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAK 446
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+ + +L RG+ NT YN+ I + V + A L++ M + D++T
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
IL+ G C+ K EAL E + K+ + Y+ I+ K ++ EA F +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 522 GCSPDVVTYTSMLDAY 537
G PDV TY M+ +
Sbjct: 567 GVEPDVQTYNVMISGF 582
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 208/454 (45%), Gaps = 12/454 (2%)
Query: 88 QARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 147
+A LF +M E P T+N LIN G+ A +++ M+ + TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
N G+ K ALN+ KM + + PD+V ++ ++ +S A F M I
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
P+ T N +I ++ A + M E+ E +PDV+++ ++I G++ E
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER--EINPDVLTFNALISASVKEGKLFEAE 386
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
+ ML I P V+YN+++ + H +A +F+ + PD+V++ ++++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVY 442
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
R+++ + + I R L N +YN LI + L+ A + +EM G+ P+
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 388 VSICTLLAACGRCSQKGKIETVLS---AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
++ LL G C + K+E L QM I L+TVAYN I + D+A L
Sbjct: 503 ITCNILLY--GFCENE-KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ S+ ++ D TY ++ISG C S +A +M Y++++ K
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
G+I ++ + M+S+G S D T + D T
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFTIKMVADLIT 653
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 203/458 (44%), Gaps = 26/458 (5%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 145
+D A F M R A N +I R + A+++ M IP + ++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
LI +L+ K+T G PD+VT N LL + S+AL+ F M T
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET- 205
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
+ +A+ +F+ M E P V+++ ++I+ + G++
Sbjct: 206 -------------------GFLEAVALFDQMVEIGLT--PVVITFNTLINGLCLEGRVLE 244
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
A N M+ +G+ +V+Y +V G K AL + +++++ +PD+V Y+++++
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
+ A+ +F + + PN+ +YN +ID + S G DA ++LR+M + I P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 386 NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
+V++ L++A + + + E + R I +TV YNS I + +D A ++
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQ 505
M D VT+ +I C+ + E + + E+ L + Y++++ + +
Sbjct: 425 DLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 506 GQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ A+ F M S G PD +T +L + K+
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 167/388 (43%), Gaps = 41/388 (10%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IY+ +I + A+ LF EM E P+ TYN +I+ G+W A ++ DM
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I P T+N LI+A G EA +C +M + PD VT+N ++ F +++
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A F+LM PD T N +I + ++ D+ + + + + + +Y
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV--ANTTTYN 471
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++IH + + + F M++ G+ P ++ N L+ + + +EAL +F I+ +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
D V+Y +++ + K +A +F + + ++P++ +YN +I + + DA
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+ +M+ +G +P + YN+ I
Sbjct: 592 NVLFHKMKDNGHEP-----------------------------------DNSTYNTLIRG 616
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVT 459
L GE DK++ L MR D+ T
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%)
Query: 62 NQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
++R A YN +I + ++ A+ LF EM PD T N L+ +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
A+ + + + + I YN +I+ EA ++ + +GV PD+ T+N++
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
+S F S S A F MK PD +T N +I +K + DK+I++ + MR
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++I + +++D+A LF + +PD +TYN +I+ A + M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
P STYN LI C +G +++ + +M NG D T ++ G
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDG 655
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 217/465 (46%), Gaps = 44/465 (9%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++++ ++N++D A+ L EM C PDA +Y +I++ G + + +
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF- 242
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P S YN LIN ++K A + ++M + G+ P++++++ L++ + Q
Sbjct: 243 ----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 193 KALSYFELMKGTHIRPDTTTLN-IVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A S+ M P+ TL+ +V C ++ +D A+D++N M + P+VV+Y
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMI-RGFGLQPNVVAYN 356
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+++ + G I + F+ M G P+I +Y +L+ +A G A+ ++N++ +
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G P++V YT+++ A R K ++A + E++ + P++ ++NA I G LD A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
K+ R+MEQ RC N V YN +
Sbjct: 477 EKVFRQMEQQ----------------HRCPP------------------NIVTYNELLDG 502
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
++A GL + + + ++ S TY L+ GSC G AL + +MM
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 492 KEVYSSILCAYSKQGQIVEAESTFNLMKSS--GCSPDVVTYTSML 534
+ + I+ AY KQG+ A +L+ PDV++YT+++
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVI 607
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 229/538 (42%), Gaps = 70/538 (13%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F +I++L G ++ + Q MK Q +C+ D++ +I ++ + ++A +F+ +
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSE-DLFISVISVYRQVGLAERAVEMFYRI 137
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+E+ C P + YN +++ G+ R M M
Sbjct: 138 KEFGCDPSVKIYNHVLDT--LLGENRIQMIYM---------------------------- 167
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS----------------KALSYFEL 200
V + M +G P++ T+N+LL A ++ A+SY +
Sbjct: 168 -----VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTV 222
Query: 201 MK--------------GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+ P + N +I+ L K Y A ++ M EK P+
Sbjct: 223 ISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS--PN 280
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
V+SY+++I++ SGQIE + ML G P+I + ++LV G +AL ++N
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 307 E-IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
+ I+ G +P++V+Y +L+ + KA VF ++ PN+ +Y +LI+ +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
G LD A+ I +M G PNVV ++ A R S+ + E+++ + +
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKK-KIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
N+ I + G D A +++ M ++ + + VTY L+ G K ++ EA E+
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
+ S Y+++L G A M G SPD +T ++ AY GK
Sbjct: 521 MRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 189/441 (42%), Gaps = 13/441 (2%)
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
T+ +I GQ ++ M S + ++I+ G + A+ + ++
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
+ G P + +N +L ++ + MK P+ T N+++ L K +
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
D A + M K C PD VSYT++I G ++ LAE +P + YN
Sbjct: 198 DGAKKLLVEMSNKG--CCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYN 250
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
AL+ K A + E+ + G P+++SY++L+N S + + A + +
Sbjct: 251 ALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKR 310
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD-GIQPNVVSICTLLAACGRCSQKGK 405
PN+ + ++L+ G DA+ + +M + G+QPNVV+ TL+ G CS
Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ--GFCSHGNI 368
Query: 406 IETVLSAAQMR--GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
++ V + M G N Y S I + G D A+ ++ M + V YT +
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG- 522
+ C+ SK+ EA S +E M S +++ + G++ AE F M+
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 523 CSPDVVTYTSMLDAYTAAGKM 543
C P++VTY +LD A ++
Sbjct: 489 CPPNIVTYNELLDGLAKANRI 509
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 206/449 (45%), Gaps = 40/449 (8%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN +I + + A L EM E P+ +Y+ LIN +GQ A + + M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN-GVGPDLVTHNILLSAFKSGSQ 190
L+ P+ T ++L+ C G +AL++ +M G+ P++V +N L+ F S
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
KA+S F M+ P+ T +I+ K D A+ I+N M S C P+VV Y
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML--TSGCCPNVVVY 425
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI-K 309
T+++ + + E+ +M E PS+ ++NA + G A VF ++ +
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
Q+ P+IV+Y LL+ ++ + ++A G+ I ++ + +YN L+ + GL
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 370 DAIKILREMEQDGIQPNVVSI-CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
A++++ +M DG P+ +++ +LA C ++GK E AAQM L+ V
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYC----KQGKAE---RAAQM----LDLV----- 589
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
S ++K + D ++YT +I G C+ + + + +E M+ +
Sbjct: 590 ------------------SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNL 517
S +S ++ + IV A F +
Sbjct: 632 VPSIATWSVLINCFILD-DIVRAHDQFTI 659
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 149/329 (45%), Gaps = 33/329 (10%)
Query: 248 VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
+++ +I ++ GQ+++ + M +G S + +++ Y G+ + A+ +F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
IK+ G P + Y +L+ + Q V+ +KR+ +PN+ +YN L+ A N
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAA-C---------------------------GR 399
+D A K+L EM G P+ VS T++++ C G
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 400 CSQ---KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
C + KG E + + +GI N ++Y++ I N G+ + A M K+ +
Sbjct: 257 CKEHDYKGAFELMREMVE-KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMH-LKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
T + L+ G +AL +M+ L + Y++++ + G IV+A S F
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ M+ GCSP++ TY S+++ + G ++
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGL--- 92
F IK L G ++ VF+ M+ Q++ C N + YN ++ A+ NRI++A GL
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQME-QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 93 -FFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACG 151
F EW + TYN L++ AG A+ ++ M+ P T N +I A
Sbjct: 519 IFMRGVEW----SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 152 SSGNWKEALNVCKKMT--DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPD 209
G + A + ++ PD++++ ++ + + E M I P
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634
Query: 210 TTTLNIVIHCLV 221
T +++I+C +
Sbjct: 635 IATWSVLINCFI 646
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 222/464 (47%), Gaps = 5/464 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM-QE 98
L+K L + + VF K R + YN +I + + + ++ ++ EM E
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKG-RKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNE 226
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 158
C PD TY+ALI+++ + G+ A+ + D+M + P+ Y L+ G ++
Sbjct: 227 GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
AL++ ++M G P + T+ L+ + +A +++ M + PD LN +++
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH-LYSVSGQIENCEAAFNMMLAEG 277
L K+ + ++ ++F+ M + C P VVSY ++I L+ + + F+ M A+
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWR--CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS 404
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+ PS +Y+ L+ Y ++ALL+ E+ + GF P +Y SL+NA G++++ + A
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+F+ +K N + Y +I +G G L +A+ + EM+ G P+V + L++
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ + ++L + G + + ++N + + G +A+ ++++++ IK D
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
VTY L+ + EA M EM YSSIL A
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 226/495 (45%), Gaps = 19/495 (3%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETY-------- 108
F+W +RN+ Y +IR +++AR L+ EM + TY
Sbjct: 113 FKWAGKRRNFQHDCSTYMTLIRC------LEEAR-LYGEMYRTIQEVVRNTYVSVSPAVL 165
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
+ L+ A GRA A+++ P+ STYN++I G ++ V +M +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 169 NG-VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 227
G PD +T++ L+S+++ + A+ F+ MK ++P ++ K+ + +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
KA+D+F M K++ C P V +YT +I +G+++ + ML +G+ P +V N
Sbjct: 286 KALDLFEEM--KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQ-KPQKARGVFEMIKRN 346
L+ G +E VF+E+ P +VSY +++ A S+ + F+ +K +
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
+ P+ +Y+ LID Y ++ A+ +L EM++ G P + C+L+ A G+ +
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
+ + +++ Y I + G+ +A+ L+ M+ + D Y L+SG
Sbjct: 464 NELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
K EA S + +M ++ IL +++ G A F +K SG PD
Sbjct: 524 MVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 527 VVTYTSMLDAYTAAG 541
VTY ++L + AG
Sbjct: 584 GVTYNTLLGCFAHAG 598
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 178/363 (49%), Gaps = 38/363 (10%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IY ++ ++ + ++++A LF EM+ C P TY LI G+AG+ A DM
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA-FKSGSQ 190
LR + P NNL+N G G +E NV +M P +V++N ++ A F+S +
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
S+ S+F+ MK + P T +I+I K + +KA+ + M EK P +Y
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP--AAY 447
Query: 251 TSIIH----------------------------LYSV-------SGQIENCEAAFNMMLA 275
S+I+ +Y+V G++ FN M
Sbjct: 448 CSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKN 507
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+G P + +YNAL+ GM EA + ++++NG R DI S+ +LN + R+ P++
Sbjct: 508 QGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRR 567
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A +FE IK + +KP+ V+YN L+ + G+ ++A +++REM+ G + + ++ ++L
Sbjct: 568 AIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILD 627
Query: 396 ACG 398
A G
Sbjct: 628 AVG 630
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 174/383 (45%), Gaps = 39/383 (10%)
Query: 199 ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYS 258
E+++ T++ L+ ++ L + + KA+ +F + +K C P +Y S+I +
Sbjct: 151 EVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK--CKPTSSTYNSVILMLM 208
Query: 259 VSGQIENCEAAFNMMLAEG-IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
GQ E + M EG P ++Y+AL+ +Y G A+ +F+E+K N +P
Sbjct: 209 QEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTE 268
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
YT+LL Y + K +KA +FE +KR P + +Y LI G G +D+A ++
Sbjct: 269 KIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKD 328
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS-YLNVG 436
M +DG+ P+VV + L+ G+ + ++ V S M V+YN+ I + + +
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP------- 489
+ + M+ + TY+ILI G CK ++ +AL +EEM P
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 490 ----------------------------VSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
VS VY+ ++ + K G++ EA FN MK+
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 522 GCSPDVVTYTSMLDAYTAAGKMN 544
G PDV Y +++ AG +N
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMIN 531
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 8/286 (2%)
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+ P+++S LV A M +AL VF + K +P +Y S++ + + +K
Sbjct: 160 VSPAVLS--ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 338 GVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
V+ EM P+ ++Y+ALI +Y G D AI++ EM+ + +QP TLL
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
+ + K + + G Y I G D+A G YK M + + D
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA-YSKQGQIVEAESTF 515
V L++ K+ + E + EM + + Y++++ A + + + E S F
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWF 397
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED----GFWKC 557
+ MK+ SP TY+ ++D Y ++ L E+ GF C
Sbjct: 398 DKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD---GIQPNVVSICTLLAACGRC 400
KR + + +Y LI L + + ++E+ ++ + P V+S L+ A GR
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLS--ELVKALGRA 175
Query: 401 SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM-RKKKIKADSVT 459
K +V A+ R K + YNS I + G+++K +Y M + D++T
Sbjct: 176 KMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT 235
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
Y+ LIS K+ + A+ +EM + ++++Y+++L Y K G++ +A F MK
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 520 SSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYEDGFWKCML 559
+GCSP V TYT ++ AG+++ GF+K ML
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVD-----EAYGFYKDML 330
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 230/512 (44%), Gaps = 3/512 (0%)
Query: 29 VGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQ 88
+ + +R F ++K +RG + F+ M+ R + IY +I +A +D+
Sbjct: 304 ISKPSRTEFGLMVKFYGRRGDMHRARETFERMR-ARGITPTSRIYTSLIHAYAVGRDMDE 362
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 148
A +M+E + TY+ ++ +AG A D+ R + S Y +I
Sbjct: 363 ALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIY 422
Query: 149 ACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRP 208
A + N + A + ++M + G+ + ++ ++ + + K L F+ +K P
Sbjct: 423 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
T +I+ K+ + KA+++ M+E+ ++ +Y+ +I+ + N A
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEG--VKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
F M+ EG+KP ++ YN ++ A+ G A+ E+++ RP ++ +++ Y
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
+S +++ VF+M++R P + ++N LI+ ++ A++IL EM G+ N
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
+ ++ GK + Q G+ ++ Y + + + G AL + K M
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 449 RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQI 508
+ I +S Y ILI G + EA +++M + Y+S + A SK G +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 509 VEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
A T M++ G P++ TYT+++ + A
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARA 812
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 182/392 (46%), Gaps = 4/392 (1%)
Query: 87 DQARGL--FFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
D+ +GL F ++E P TY LIN + + G+ A+ + M + + TY+
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
+IN +W A V + M G+ PD++ +N ++SAF +A+ + M+
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
RP T T +IH K +++++F+ MR + C P V ++ +I+ Q+E
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR--RCGCVPTVHTFNGLINGLVEKRQME 641
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
+ M G+ + +Y ++ YA+ G +A F ++ G DI +Y +LL
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
A +S + Q A V + + + N YN LID + G + +A ++++M+++G++
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
P++ + + ++AC + + + + G+K N Y + I + +KAL
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
Y+ M+ IK D Y L++ + EA
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 191/440 (43%), Gaps = 2/440 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IY +I H + +++A L EM+E Y+ +++ + + + + +
Sbjct: 416 IYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL 475
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
P+ TY LIN G +AL V + M + GV +L T++++++ F +
Sbjct: 476 KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW 535
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+ A + FE M ++PD N +I + D+AI M +K P ++
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM--QKLRHRPTTRTFM 593
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
IIH Y+ SG + F+MM G P++ ++N L+ ++A+ + +E+
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G + +YT ++ Y KA F ++ L ++ +Y AL+ A +G + A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+ + +EM I N L+ R + ++ + G+K + Y S I +
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
G+ ++A + M +K + TYT LI G + S +ALS EEM + +
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 492 KEVYSSILCAYSKQGQIVEA 511
K VY +L + + I EA
Sbjct: 834 KAVYHCLLTSLLSRASIAEA 853
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 116/295 (39%), Gaps = 20/295 (6%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
F LI L ++ +E + M A Y +++ +A +A F
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEM-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR 684
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
+Q D TY AL+ A ++G+ + A+ + +M IP + YN LI+ G+
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 744
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
EA ++ ++M GV PD+ T+ +SA ++A E M+ ++P+ T
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPD----------VVSYTSIIHLYSVSGQIEN 265
+I + +KA+ + M K PD ++S SI Y SG +
Sbjct: 805 LIKGWARASLPEKALSCYEEM--KAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTI 862
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
C+ L + ++ L A+ G E L Q F PD S+
Sbjct: 863 CKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETL-------QKTFPPDWSSH 910
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/503 (25%), Positives = 224/503 (44%), Gaps = 43/503 (8%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F L++ Q ++ F MK ++ + + + N ++ L +R NRI+ A + +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMK-EKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
K + T+N +IN + G+ + A + M I P+ TYN L+ G
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+ A + +M G PD+ T+N +LS + + S+ L MK + PD+ + NI+
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE---MKEIGLVPDSVSYNIL 333
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
I + A + M K P +Y ++IH + +IE E + +
Sbjct: 334 IRGCSNNGDLEMAFAYRDEM--VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
GI V+YN L+ Y HG K+A + +E+ +G +P +YTSL+ R K ++A
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI-CTLLA 395
+FE + +KP+LV N L+D + + G +D A +L+EM+ I P+ V+ C +
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
CG G++++A L M+++ IK
Sbjct: 512 LCGE------------------------------------GKFEEARELMGEMKRRGIKP 535
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
D ++Y LISG K A +EM+ L + Y+++L SK + AE
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
Query: 516 NLMKSSGCSPDVVTYTSMLDAYT 538
MKS G P+ ++ S+++A +
Sbjct: 596 REMKSEGIVPNDSSFCSVIEAMS 618
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 196/463 (42%), Gaps = 40/463 (8%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
++++++R + +D+A F+ M+E P ET N ++ R + A DM
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
R I + T+N +IN +CK+ +
Sbjct: 217 YRMEIKSNVYTFNIMINV------------LCKE-----------------------GKL 241
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
KA + +M+ I+P T N ++ + + A I + M+ K + PD+ +Y
Sbjct: 242 KKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ--PDMQTYN 299
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
I+ G+ M G+ P VSYN L+ + +G + A +E+ +
Sbjct: 300 PILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ 356
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G P +Y +L++ K + A + I+ + + V+YN LI+ Y +G A
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+ EM DGIQP + +L+ R ++ + + + +G+K + V N+ +
Sbjct: 417 FALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
+ +G D+A L K M I D VTY L+ G C K+ EA M EM +
Sbjct: 477 HCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Query: 492 KEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
Y++++ YSK+G A + M S G +P ++TY ++L
Sbjct: 537 HISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 167/384 (43%), Gaps = 40/384 (10%)
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A+ F LMK P T T N ++ L +L + + A + M + E +V ++
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY--RMEIKSNVYTFNI 230
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I++ G+++ + +M GIKP+IV+YN LV ++ G + A L+ +E+K G
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
F+PD+ +Y +L+ + A V +K L P+ VSYN LI +NG L+ A
Sbjct: 291 FQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
EM + G+ P + TL+ ++ E ++ + +GI L++V YN I Y
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILI---------------------------- 464
G+ KA L+ M I+ TYT LI
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 465 -------SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
G C + A S ++EM + + Y+ ++ +G+ EA
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Query: 518 MKSSGCSPDVVTYTSMLDAYTAAG 541
MK G PD ++Y +++ Y+ G
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKG 551
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 169/348 (48%), Gaps = 13/348 (3%)
Query: 210 TTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAA 269
T ++++ C +LR D+AI+ F M+EK +P + I+ L S +IEN
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKG--FYPKTETCNHILTLLSRLNRIENAWVF 212
Query: 270 FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
+ M IK ++ ++N ++ G K+A ++ G +P IV+Y +L+ +
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL 272
Query: 330 SQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
+ + AR + +K +P++ +YN ++ + G A ++LREM++ G+ P+ VS
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVS 329
Query: 390 ICTLLAACGRCSQKGKIETVLSAAQ---MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYK 446
L+ C S G +E + +G+ YN+ I + + A L +
Sbjct: 330 YNILIRGC---SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQG 506
+R+K I DSVTY ILI+G C+ +A + +EMM + ++ Y+S++ ++
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN 446
Query: 507 QIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN--FEPLKYED 552
+ EA+ F + G PD+V +++D + A G M+ F LK D
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 167/364 (45%), Gaps = 7/364 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN +++ + RI+ AR + EM+ +PD +TYN +++ G+ A ++ +M
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMK 319
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P +YN LI C ++G+ + A +M G+ P T+N L+ ++
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A ++ I D+ T NI+I+ + KA + + M P +YTS
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM--TDGIQPTQFTYTS 437
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I++ + + F ++ +G+KP +V N L+ + A G A + E+
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PD V+Y L+ K ++AR + +KR +KP+ +SYN LI Y G A
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKI-ETVLSAAQMRGIKLNTVAYNSAIGS 431
+ EM G P +++ LL + +Q+G++ E +L + GI N ++ S I +
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLSK-NQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Query: 432 YLNV 435
N+
Sbjct: 617 MSNL 620
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 228/523 (43%), Gaps = 50/523 (9%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N ++ + + +D A+ F + + P ++N LIN G A+ + DM
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL---------- 182
+ + P TYN L G A V + M D G+ PD++T+ ILL
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 183 ----------------------SAFKSG----SQYSKALSYFELMKGTHIRPDTTTLNIV 216
S SG + +ALS F MK + PD +IV
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
IH L KL ++D A+ +++ M +K+ P+ ++ +++ G + + + +++
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKR--ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G IV YN ++ YA G +EAL +F + + G P + ++ SL+ Y ++Q +A
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
R + ++IK L P++VSY L+DAY + G ++ REM+ +GI P V+ +
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Query: 397 CGR------CSQK------GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
R C+ K + L + GI + + YN+ I V A
Sbjct: 583 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 642
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ M+ + + A S TY ILI C +A SF+ + + +SK Y++++ A+
Sbjct: 643 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 702
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEP 547
+G A F+ + G + + Y+++++ MN P
Sbjct: 703 KGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFP 745
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 218/482 (45%), Gaps = 15/482 (3%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWR-CKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
Y+ ++ R +++ A LF EW+ P ++N++++ + + G A + +
Sbjct: 190 YSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
L+ + PS ++N LIN G+ EAL + M +GV PD VT+NIL F
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
S A M + PD T I++ +L D + + M + E + ++ +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS-IIPCS 367
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++ +G+I+ + FN M A+G+ P +V+Y+ ++ G AL +++E+
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
P+ ++ +LL + +AR + + + + ++V YN +ID Y +G +++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+++ + + + GI P+V + +L+ + + +L ++ G+ + V+Y + + +
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK---- 487
Y N G L + M+ + I +VTY+++ G C+ K+ + E + K
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 488 --------LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
+P + Y++I+ + + A +MKS TY ++D+
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 540 AG 541
G
Sbjct: 668 YG 669
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 217/491 (44%), Gaps = 17/491 (3%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+++M++ L +R +D + + +M++ ++YN+++ H R W D+
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL-YHFRETDKMW------DV 178
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + TY+ +++ ++A+ + +GP +V+ N ++S +
Sbjct: 179 YKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A S+F + + P + NI+I+ L + +A+++ + M + E PD V+Y
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE--PDSVTYN 296
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+ + + G I ML +G+ P +++Y L+ G L++ ++
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 312 GFRPD-IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
GF + I+ + +L+ ++ + +A +F +K + L P+LV+Y+ +I G D
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 416
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI---ETVLSAAQMRGIKLNTVAYNS 427
A+ + EM I PN + LL G C QKG + ++L + G L+ V YN
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLL--GLC-QKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK 487
I Y G ++AL L+K + + I T+ LI G CK EA ++ +
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 488 LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM-NFE 546
L S Y++++ AY+ G + MK+ G P VTY+ + K N
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 547 PLKYEDGFWKC 557
+ E F KC
Sbjct: 594 HVLRERIFEKC 604
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 18/292 (6%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN++I +A+ I++A LF + E P T+N+LI + + A I+D +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ- 190
+ PS +Y L++A + GN K + ++M G+ P VT++++ G +
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 191 -----------YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
+ K M+ I PD T N +I L +++ A M+ +
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
+ +Y +I V G I ++ + + + S +Y L+ A+ G +
Sbjct: 650 NLDASS--ATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK----PQKARGVFEMIKRNK 347
A+ +F+++ GF I Y++++N R P ++ GV +I +
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLISNER 759
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 228/523 (43%), Gaps = 50/523 (9%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N ++ + + +D A+ F + + P ++N LIN G A+ + DM
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL---------- 182
+ + P TYN L G A V + M D G+ PD++T+ ILL
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 183 ----------------------SAFKSG----SQYSKALSYFELMKGTHIRPDTTTLNIV 216
S SG + +ALS F MK + PD +IV
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
IH L KL ++D A+ +++ M +K+ P+ ++ +++ G + + + +++
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKR--ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G IV YN ++ YA G +EAL +F + + G P + ++ SL+ Y ++Q +A
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
R + ++IK L P++VSY L+DAY + G ++ REM+ +GI P V+ +
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKG 582
Query: 397 CGR------CSQK------GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
R C+ K + L + GI + + YN+ I V A
Sbjct: 583 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 642
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ M+ + + A S TY ILI C +A SF+ + + +SK Y++++ A+
Sbjct: 643 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 702
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEP 547
+G A F+ + G + + Y+++++ MN P
Sbjct: 703 KGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFP 745
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 218/482 (45%), Gaps = 15/482 (3%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWR-CKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
Y+ ++ R +++ A LF EW+ P ++N++++ + + G A + +
Sbjct: 190 YSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
L+ + PS ++N LIN G+ EAL + M +GV PD VT+NIL F
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
S A M + PD T I++ +L D + + M + E + ++ +
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS-IIPCS 367
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++ +G+I+ + FN M A+G+ P +V+Y+ ++ G AL +++E+
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
P+ ++ +LL + +AR + + + + ++V YN +ID Y +G +++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+++ + + + GI P+V + +L+ + + +L ++ G+ + V+Y + + +
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK---- 487
Y N G L + M+ + I +VTY+++ G C+ K+ + E + K
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 488 --------LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
+P + Y++I+ + + A +MKS TY ++D+
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 540 AG 541
G
Sbjct: 668 YG 669
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 217/491 (44%), Gaps = 17/491 (3%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+++M++ L +R +D + + +M++ ++YN+++ H R W D+
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL-YHFRETDKMW------DV 178
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + TY+ +++ ++A+ + +GP +V+ N ++S +
Sbjct: 179 YKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A S+F + + P + NI+I+ L + +A+++ + M + E PD V+Y
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE--PDSVTYN 296
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+ + + G I ML +G+ P +++Y L+ G L++ ++
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 312 GFRPD-IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
GF + I+ + +L+ ++ + +A +F +K + L P+LV+Y+ +I G D
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 416
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI---ETVLSAAQMRGIKLNTVAYNS 427
A+ + EM I PN + LL G C QKG + ++L + G L+ V YN
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLL--GLC-QKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK 487
I Y G ++AL L+K + + I T+ LI G CK EA ++ +
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 488 LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM-NFE 546
L S Y++++ AY+ G + MK+ G P VTY+ + K N
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 547 PLKYEDGFWKC 557
+ E F KC
Sbjct: 594 HVLRERIFEKC 604
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 18/292 (6%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN++I +A+ I++A LF + E P T+N+LI + + A I+D +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ- 190
+ PS +Y L++A + GN K + ++M G+ P VT++++ G +
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589
Query: 191 -----------YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
+ K M+ I PD T N +I L +++ A M+ +
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
+ +Y +I V G I ++ + + + S +Y L+ A+ G +
Sbjct: 650 NLDASS--ATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK----PQKARGVFEMIKRNK 347
A+ +F+++ GF I Y++++N R P ++ GV +I +
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLISNER 759
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 253/549 (46%), Gaps = 54/549 (9%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQR-------------NYCARNDI------YNMMIRLH 80
LIK ++G +E VF+ +K ++ YC I ++ MI +
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 81 ARHN---------------RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
R N ++ +A +F M +W KPD TYN L++ + RAG A+
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
+ D M + + P+ TYN L+ G + + L++ K M GV D ++ + LL A
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
+++A+ +E + + DT TLN++I L K+ + ++A +I +++ + C P
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR--CKP 539
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV-GAYAAHGMGKEALLV 304
V +Y ++ H Y G ++ A M +GI P+I YN L+ GA+ + K A LV
Sbjct: 540 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLV 599
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV-FEMIKRNKLKPNLVSYNALIDAYG 363
E++ G P + +Y +L+ + KA FEMI++ ++ N I +
Sbjct: 600 I-ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG------ITLNVNICSKI 652
Query: 364 SNGL-----LDDAIKILREM-EQDGIQPNVVSICTLL-AACGRCSQKGKI-ETVLSAAQM 415
+N L +D+A +L+++ + D + P S+ L A+ C + KI E+V ++
Sbjct: 653 ANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPK 712
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM-RKKKIKADSVTYTILISGSCKMSKYG 474
+ + N + YN AI G+ + A L+ + + D TYTILI G
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 475 EALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+A + +EM + + Y++++ K G + A+ + + G +P+ +TY +++
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 535 DAYTAAGKM 543
D +G +
Sbjct: 833 DGLVKSGNV 841
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 229/506 (45%), Gaps = 29/506 (5%)
Query: 51 EHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM-------------- 96
E C +F Q+ + Y M+ + +R Q + E+
Sbjct: 85 EACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGEL 144
Query: 97 ----QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGS 152
+E+ P ++ ++ + G + A+++ D+M PS + N+L++
Sbjct: 145 VRVFKEFSFSPT--VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVR 202
Query: 153 SGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTT 211
G AL+V +M V PD+ T +I+++A+ KA+ + E + +
Sbjct: 203 KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVV 262
Query: 212 TLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN 271
T N +I+ + + + M E+ +VV+YTS+I Y G +E E F
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERG--VSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 272 MMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQ 331
++ + + Y L+ Y G ++A+ V + + + G R + SL+N Y +S
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 332 KPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
+ +A +F + LKP+ +YN L+D Y G +D+A+K+ +M Q + P V++
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 392 TLLAACGRCSQKGKIETVLSAAQM---RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
LL R G VLS +M RG+ + ++ ++ + + +G++++A+ L++++
Sbjct: 441 ILLKGYSRI---GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV 497
Query: 449 RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQI 508
+ + D++T ++ISG CKM K EA ++ + + + + Y ++ Y K G +
Sbjct: 498 LARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNL 557
Query: 509 VEAESTFNLMKSSGCSPDVVTYTSML 534
EA + M+ G P + Y +++
Sbjct: 558 KEAFAVKEYMERKGIFPTIEMYNTLI 583
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 212/511 (41%), Gaps = 41/511 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN +I +A ++ + M E + TY +LI + + G A ++ + +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ + Y L++ +G ++A+ V M + GV + N L++ + Q
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A F M ++PD T N ++ + D+A+ + + M +K E P V++Y
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK--EVVPTVMTYNI 441
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++ YS G + + + MML G+ +S + L+ A G EA+ ++ + G
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
D ++ +++ + +K +A+ + + + + KP + +Y AL Y G L +A
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+ ME+ GI P + TL++ + K+ ++ + RG+ Y + I +
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGW 621
Query: 433 LNVGEYDKALGLYKSMRKKKI------------------KADS--------VTYTILISG 466
N+G DKA M +K I K D V + +L+ G
Sbjct: 622 CNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPG 681
Query: 467 SCKMSKYGEALSF-----------MEEMMHLKLPVSKE-VYSSILCAYSKQGQIVEAEST 514
+ ++ EA + +E KL V VY+ + K G++ +A
Sbjct: 682 YQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKL 741
Query: 515 F-NLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
F +L+ S PD TYT ++ AG +N
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 195/440 (44%), Gaps = 3/440 (0%)
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA-AIPPSRSTYNNLI 147
A ++ +M + PD T + ++NA+ R+G AM + + + + TYN+LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
N G+ + V + M++ GV ++VT+ L+ + +A FEL+K +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
D +++ + Q A+ + ++M E + + + S+I+ Y SGQ+ E
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN--SLINGYCKSGQLVEAE 386
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
F+ M +KP +YN LV Y G EAL + +++ Q P +++Y LL Y
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
R +++M+ + + + +S + L++A G ++A+K+ + G+ +
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
+++ +++ + + + + +L + K Y + Y VG +A + +
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
M +K I Y LISG+ K + + E+ L + Y +++ + G
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 508 IVEAESTFNLMKSSGCSPDV 527
I +A +T M G + +V
Sbjct: 627 IDKAYATCFEMIEKGITLNV 646
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 173/345 (50%), Gaps = 23/345 (6%)
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN-----CE-AAFN----MMLAE 276
+ ++IFN + K+ + PD +Y ++H+ S + + CE A N ++ E
Sbjct: 85 EACLEIFN-LASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGE 143
Query: 277 GIK--------PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
++ P++ ++ ++ YA G+ K AL VF+ + G P ++S SLL+
Sbjct: 144 LVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD-GIQPNV 387
R + A V++ + ++ P++ + + +++AY +G +D A+ +E E G++ NV
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
V+ +L+ + VL RG+ N V Y S I Y G ++A +++
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
+++KK+ AD Y +L+ G C+ + +A+ + M+ + + + + +S++ Y K GQ
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
+VEAE F+ M PD TY +++D Y AG ++ E LK D
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD-EALKLCD 425
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 152/331 (45%), Gaps = 20/331 (6%)
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE--- 276
V L YD+ I E PDV + + +++ Y SG ++ M+ A+
Sbjct: 207 FVALHVYDQMISF---------EVSPDVFTCSIVVNAYCRSGNVDKA-----MVFAKETE 252
Query: 277 ---GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
G++ ++V+YN+L+ YA G + V + + G ++V+YTSL+ Y +
Sbjct: 253 SSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLM 312
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
++A VFE++K KL + Y L+D Y G + DA+++ M + G++ N +L
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ + Q + E + S +K + YN+ + Y G D+AL L M +K++
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+TY IL+ G ++ + + LS + M+ + + S++L A K G EA
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ + + G D +T M+ K+N
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVN 523
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 155/353 (43%), Gaps = 49/353 (13%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+MI + ++++A+ + + +RCKP +TY AL + + + G + A + + M R
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
I P+ YN LI+ + + ++ ++ G+ P + T+ L++ + + K
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Query: 194 ALSY-FELMKGTHIRPDTTTLNIVI----------------HCLV--KLRQYDKAIDIFN 234
A + FE+++ TLN+ I CL+ K+ +D + +
Sbjct: 630 AYATCFEMIE------KGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683
Query: 235 SMRE-----------------------KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN 271
S++E K P+ + Y I +G++E+ F+
Sbjct: 684 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743
Query: 272 MMLA-EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
+L+ + P +Y L+ A G +A + +E+ G P+IV+Y +L+ +
Sbjct: 744 DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL 803
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
+A+ + + + + PN ++YN LID +G + +A+++ +M + G+
Sbjct: 804 GNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%)
Query: 41 IKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWR 100
I L + G +E +F + + + Y ++I A I++A L EM
Sbjct: 726 IAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKG 785
Query: 101 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 160
P+ TYNALI + G A ++ + + I P+ TYN LI+ SGN EA+
Sbjct: 786 IIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAM 845
Query: 161 NVCKKMTDNGV 171
+ +KM + G+
Sbjct: 846 RLKEKMIEKGL 856
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 193/447 (43%), Gaps = 37/447 (8%)
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 154
E+ E +PD YNALIN + + A ++D M P TYN +I + S G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
AL V ++ + P ++T+ IL+ A +AL + M ++PD T N
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 215 IVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMML 274
+I + K D+A ++ ++ K C PDV+SY ++ G+ E E M
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKG--CEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 275 AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQ 334
+E P++V+Y+ L+ G +EA+ + +K+ G PD SY L+ A+ R +
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
A E + + P++V+YN ++ NG D A++I ++ + G PN S T+
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 395 AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
+A K + ++ GI + + YNS I G D+A L MR +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
VTY I++ G CK + +A++ +E M+
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMV------------------------------ 535
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+GC P+ TYT +++ AG
Sbjct: 536 -----GNGCRPNETTYTVLIEGIGFAG 557
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 201/430 (46%), Gaps = 9/430 (2%)
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
R+G + ++++++ M+R P LI + N +A+ V + + G PD+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
+N L++ F ++ A + M+ PDT T NI+I L + D A+ + N +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
C P V++YT +I + G ++ + ML+ G+KP + +YN ++ G
Sbjct: 220 L--SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYN 356
M A + ++ G PD++SY LL A K ++ + + K PN+V+Y+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM- 415
LI +G +++A+ +L+ M++ G+ P+ S L+AA R +G+++ + +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR---EGRLDVAIEFLETM 394
Query: 416 --RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
G + V YN+ + + G+ D+AL ++ + + +S +Y + S
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
AL + EMM + + Y+S++ ++G + EA M+S P VVTY +
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 534 LDAYTAAGKM 543
L + A ++
Sbjct: 515 LLGFCKAHRI 524
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 195/404 (48%), Gaps = 17/404 (4%)
Query: 153 SGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTT 212
SGN+ E+L++ + M G PD++ L+ F + KA+ E+++ +PD
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
N +I+ K+ + D A + + MR K + PD V+Y +I G+++ N
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSK--DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
+L++ +P++++Y L+ A G EAL + +E+ G +PD+ +Y +++ +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 333 PQKARGVFEMIKRNKLK---PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
+A FEM++ +LK P+++SYN L+ A + G ++ K++ +M + PNVV+
Sbjct: 279 VDRA---FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 390 ICTLLAACGRCSQKGKIETVLSAAQM---RGIKLNTVAYNSAIGSYLNVGEYDKALGLYK 446
L+ R GKIE ++ ++ +G+ + +Y+ I ++ G D A+ +
Sbjct: 336 YSILITTLCR---DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQG 506
+M D V Y +++ CK K +AL ++ + + Y+++ A G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 507 QIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN--FEPL 548
+ A M S+G PD +TY SM+ G ++ FE L
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 194/448 (43%), Gaps = 40/448 (8%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI + I+ V M++ +++ YN+MI ++D A + ++
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRS-KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
C+P TY LI A G A+ +MD+ML + P TYN +I G A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ + + G PD++++NILL A + ++ + M P+ T +I+I
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
L + + ++A+++ M+EK PD SY +I + G+++ M+++G
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKG--LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA-YGRSQKPQKARG 338
P IV+YN ++ +G +AL +F ++ + G P+ SY ++ +A + K +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+ EM+ N + P+ ++YN++I G++D+A ++L +M P+VV+
Sbjct: 461 ILEMMS-NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT--------- 510
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
YN + + + A+ + +SM + +
Sbjct: 511 --------------------------YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHL 486
TYT+LI G EA+ +++ +
Sbjct: 545 TYTVLIEGIGFAGYRAEAMELANDLVRI 572
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 210/456 (46%), Gaps = 4/456 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+++ I ++ + + A ++ M P+ TY LI + G+ A + +
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
L+ + PS TY++LI+ GN + + + M G PD+V + +L+
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A+ + M G IR + N +I +L ++D+A+ +F M PDV ++T
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM--GIYGIKPDVATFT 535
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+++ + + G++E F M G++P ++Y L+ A+ H L +F+ +++N
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
DI +++ + + + A F + K++P++V+YN +I Y S LD+A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 372 IKILREMEQDGIQPNVVSICTLL-AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
+I ++ PN V++ L+ C G I + S +G K N V Y +
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR-MFSIMAEKGSKPNAVTYGCLMD 714
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+ + + + L++ M++K I V+Y+I+I G CK + EA + + + KL
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
Y+ ++ Y K G++VEA + M +G PD
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 225/518 (43%), Gaps = 7/518 (1%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
F LI +RG ++ +F+ M+ QR Y+ +I + + + LF +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVME-QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
K D +++ I+ + ++G A + ML I P+ TY LI G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
EA + ++ G+ P +VT++ L+ F + +E M PD +
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
++ L K A+ S++ +VV + S+I + + + F +M
Sbjct: 467 LVDGLSKQGLMLHAMRF--SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
GIKP + ++ ++ G +EAL +F + + G PD ++Y +L++A+ + KP
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+F++++RNK+ ++ N +I ++DA K + + ++P++V+ T++
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI- 643
Query: 396 ACGRCSQK--GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
CG CS + + E + ++ NTV I + D A+ ++ M +K
Sbjct: 644 -CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
K ++VTY L+ K + EEM + S YS I+ K+G++ EA +
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
F+ + PDVV Y ++ Y G++ L YE
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/534 (22%), Positives = 225/534 (42%), Gaps = 44/534 (8%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLF-FEMQEWRCKPDAETYNALINAH 115
F + + R+ D+ ++ R+ +D+A +F + Q P Y ++N+
Sbjct: 133 FNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSL 191
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSR-STYNNLINACGSSGNWKEALNV------------ 162
+ + + D + R I PS S + +++A G +AL+
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG 251
Query: 163 ---CKKMT-------------------DNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
C K+ D G P++VT L++ F + +A F++
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
M+ I PD + +I K +F+ K + DVV ++S I +Y S
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKL--DVVVFSSTIDVYVKS 369
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G + + ML +GI P++V+Y L+ G EA ++ +I + G P IV+Y
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
+SL++ + + + ++E + + P++V Y L+D GL+ A++ +M
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
I+ NVV +L+ R ++ + V + GIK + + + + + G ++
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
AL L+ M K ++ D++ Y LI CK K L + M K+ V + ++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN-----FEPLK 549
K +I +A FN + PD+VTY +M+ Y + +++ FE LK
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 190/424 (44%), Gaps = 43/424 (10%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++I+ + RI +A G++ ++ + +P TY++LI+ + G R + +DM+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ PP Y L++ G A+ KM + ++V N L+ + +++
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+AL F LM I+PD T V+ + + ++A+ +F R K PD ++Y +
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF--FRMFKMGLEPDALAYCT 571
Query: 253 -----------------------------------IIHLYSVSGQIENCEAAFNMMLAEG 277
+IHL +IE+ FN ++
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
++P IV+YN ++ Y + EA +F +K F P+ V+ T L++ ++ A
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+F ++ KPN V+Y L+D + + ++ + K+ EM++ GI P++VS ++
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID-- 749
Query: 398 GRCSQKGKIE---TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
G C ++G+++ + A + + VAY I Y VG +A LY+ M + +K
Sbjct: 750 GLC-KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 455 ADSV 458
D +
Sbjct: 809 PDDL 812
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 2/286 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+ ++R+ R+++A LFF M + +PDA Y LI+A + + + + D M
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R I + N +I+ ++A + + + PD+VT+N ++ + S +
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A FEL+K T P+T TL I+IH L K D AI +F+ M EK S+ P+ V+Y
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK--PNAVTYGC 711
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++ +S S IE F M +GI PSIVSY+ ++ G EA +F++
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
PD+V+Y L+ Y + + +A ++E + RN +KP+ + AL
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 246/569 (43%), Gaps = 52/569 (9%)
Query: 14 SLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIY 73
+L +D++ L+ W R + K ++KE E +F+W K++ Y Y
Sbjct: 134 ALDSIEDVEDALSPWAERLSNKERTIILKEQIH---WERAVEIFEWFKSKGCYELNVIHY 190
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+M+R+ + + + L+ EM KP TY LI+ + + G A+ + M +
Sbjct: 191 NIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSK 250
Query: 134 AAIPP-----------------------------------------SRSTYNNLINACGS 152
+ P S TYN +I+ G
Sbjct: 251 IGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGK 310
Query: 153 SGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTT 212
SG KEA K+M + G+ P VT N ++ + + Q + S + MK H PDT T
Sbjct: 311 SGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRT 369
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
NI+I K ++A F M++ PD VSY ++++ +S+ +E E
Sbjct: 370 YNILISLHTKNNDIERAGAYFKEMKDDG--LKPDPVSYRTLLYAFSIRHMVEEAEGLIAE 427
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
M + ++ + +AL Y M +++ F G Y++ ++AYG
Sbjct: 428 MDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS-EGYSANIDAYGERGY 486
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
+A VF + + K ++ YN +I AYG + + A ++ M G+ P+ + T
Sbjct: 487 LSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
L+ K L + G + + Y + I S++ +G+ + A +YK M +
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
I+ D V Y +LI+ +A+S++E M +P + +Y+S++ Y+K G + EAE
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 513 STF-NLMKSSGCS--PDVVTYTSMLDAYT 538
+ + L++S + PDV T M++ Y+
Sbjct: 666 AIYRKLLQSCNKTQYPDVYTSNCMINLYS 694
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 219/512 (42%), Gaps = 46/512 (8%)
Query: 61 KNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQ 120
K + C + YN MI + + +I +A F M E P T+N +I+ +G GQ
Sbjct: 289 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQ 348
Query: 121 WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI 180
++M M P +R TYN LI+ + + + A K+M D+G+ PD V++
Sbjct: 349 LGEVTSLMKTMKLHCAPDTR-TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
LL AF +A M ++ D T + + V+ +K+ F K+
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWF-----KR 462
Query: 241 SECHPDVVS--YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
++ S Y++ I Y G + E F + E K +++ YN ++ AY
Sbjct: 463 FHVAGNMSSEGYSANIDAYGERGYLSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSC 521
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
++A +F + G PD +Y +L+ + P K R E ++ + + Y A+
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
I ++ G L+ A ++ +EM + I+P+VV L+ A + + + A + GI
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSM------------------------------ 448
N+V YNS I Y VG D+A +Y+ +
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 449 -------RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
K++ +A+ T+ +++ K ++ EA ++M +K+ Y+S+L
Sbjct: 702 AEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGL 761
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
++ G+ EA TF M SSG PD T+ S+
Sbjct: 762 FALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 187/405 (46%), Gaps = 20/405 (4%)
Query: 41 IKELTQ----RGSIEHCNLVFQWMKNQRNYCARN---DIYNMMIRLHARHNRIDQARGLF 93
I E TQ R +E L W +R + A N + Y+ I + + +A +F
Sbjct: 435 IDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVF 494
Query: 94 FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 153
QE + E YN +I A+G + A + + M+ + P + TYN L+ S+
Sbjct: 495 ICCQEVNKRTVIE-YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASA 553
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
+ +KM + G D + + ++S+F Q + A ++ M +I PD
Sbjct: 554 DMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVY 613
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
++I+ +A+ +M+E + + V Y S+I LY+ G ++ EA + +
Sbjct: 614 GVLINAFADTGNVQQAMSYVEAMKE--AGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
Query: 274 LAEGIK---PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
L K P + + N ++ Y+ M ++A +F+ +KQ G + ++ +L Y ++
Sbjct: 672 LQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKN 730
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN---V 387
+ ++A + + ++ K+ + +SYN+++ + +G +A++ +EM GIQP+
Sbjct: 731 GRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTF 790
Query: 388 VSICTLLAACGRCSQKG--KIETVLSAAQMRGIKLNTVAYNSAIG 430
S+ T+L G S+K KIE + RG++L +S +G
Sbjct: 791 KSLGTILMKLGM-SKKAVRKIEEIRKKEIKRGLELWISTLSSLVG 834
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 223/484 (46%), Gaps = 13/484 (2%)
Query: 64 RNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
R Y +N ++ + ++ A + M + C+PD +YN+LI+ H R G R
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 124 AMNIMDDMLRAA----IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
A +++ LRA+ P ++N+L N E M P++VT++
Sbjct: 110 ASLVLES-LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYS 167
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
+ F + AL F MK + P+ T +I K + A+ ++ MR
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
+ +VV+YT++I + G+++ E ++ M+ + ++P+ + Y ++ + G
Sbjct: 228 RMSL--NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
A+ ++ G R DI +Y +++ + K ++A + E ++++ L P++V + ++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
+AY +G + A+ + ++ + G +P+VV++ T++ + G++ + + K
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK---NGQLHEAIVYFCIE--K 400
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
N V Y I + G++ + L+ + + + D YT I+G CK +A
Sbjct: 401 ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
M+ L + Y++++ + +G +VEA F+ M +SG SPD + ++ AY
Sbjct: 461 KTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEK 520
Query: 540 AGKM 543
G M
Sbjct: 521 EGNM 524
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 189/391 (48%), Gaps = 6/391 (1%)
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+EAL ++ + PD T N + + + +L + + P ++ N V
Sbjct: 3 REALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSV 62
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+ + KL Q A DI +SM + C PDV+SY S+I + +G I + + A
Sbjct: 63 VSFVCKLGQVKFAEDIVHSM--PRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 277 G---IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
KP IVS+N+L ++ M E + V+ + P++V+Y++ ++ + +S +
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
Q A F +KR+ L PN+V++ LID Y G L+ A+ + +EM + + NVV+ L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ + + + E + S ++ N++ Y + I + G+ D A+ M + +
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ D Y ++ISG C K EA +E+M L ++++++ AY K G++ A +
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
++ + G PDVV ++M+D G+++
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLH 390
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 209/466 (44%), Gaps = 38/466 (8%)
Query: 70 NDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMD 129
+++ M+R + R+++A G+ +MQ P + T N ++ G +A N+ D
Sbjct: 147 HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 206
Query: 130 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGS 189
+M + P S+Y ++ C G +EA M G PD T ++L+A
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266
Query: 190 QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
++A+ YF K ID+ P++++
Sbjct: 267 LVNRAIWYFR----------------------------KMIDL---------GFKPNLIN 289
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE-I 308
+TS+I G I+ M+ G KP++ ++ AL+ G ++A +F + +
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
+ + ++P++ +YTS++ Y + K +A +F +K L PN+ +Y LI+ + G
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
A +++ M +G PN+ + + + + S+ + +L+ A G++ + V Y
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I + ++AL + M K +AD ILI+ C+ K E+ + ++ L L
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+KE Y+S++ Y K+G I A F+ MK GC PD TY S++
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 191/401 (47%), Gaps = 10/401 (2%)
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
G EA+ + M + G+ P +T N +L A + F+ M + PD+++
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 214 NI-VIHCLV--KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF 270
+ VI C K+++ D+ + M ++ PD + T I+ +G + F
Sbjct: 221 KLMVIGCFRDGKIQEADRWL---TGMIQRGF--IPDNATCTLILTALCENGLVNRAIWYF 275
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
M+ G KP+++++ +L+ G K+A + E+ +NG++P++ ++T+L++ +
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 331 QKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
+KA +F ++++ + KPN+ +Y ++I Y L+ A + M++ G+ PNV +
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 390 ICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR 449
TL+ + G+ +++ G N YN+AI S +A L
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 450 KKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIV 509
++AD VTYTILI CK + +AL+F M + + ++ A+ +Q ++
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 510 EAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKY 550
E+E F L+ S G P TYTSM+ Y G ++ LKY
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL-ALKY 555
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 155/379 (40%), Gaps = 6/379 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI L +RG E +F + Y Y MI + + +++++A LF M+E
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P+ TY LIN H +AG + A +M+ M P+ TYN I++ EA
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ K G+ D VT+ IL+ + ++AL++F M T D NI+I
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
+ ++ ++ +F + P +YTS+I Y G I+ F+ M G
Sbjct: 508 FCRQKKMKESERLFQLVVSLG--LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
P +Y +L+ M EA ++ + G P V+ +L Y + A +
Sbjct: 566 PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
E + + K + + L+ S + A +++ + + V++ AC
Sbjct: 626 LEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSE 682
Query: 400 CSQKGKIETVLSAAQMRGI 418
S K + T L+ RG+
Sbjct: 683 -SGKNNLVTDLTERISRGV 700
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/498 (19%), Positives = 197/498 (39%), Gaps = 57/498 (11%)
Query: 58 QWMKN--QRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+W+ QR + N +++ + +++A F +M + KP+ + +LI+
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-DNGVGPD 174
+ G + A ++++M+R P+ T+ LI+ G ++A + K+ + P+
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
+ T+ ++ + + ++A F MK + P+ T +I+ K + +A ++ N
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
M ++ P++ +Y + I + N + G++ V+Y L+
Sbjct: 418 LMGDEGF--MPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
+AL F + + GF D+ L+ A+ R +K +++ +F+++ L P +
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
Y ++I Y G +D A+K M++ G P
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVP----------------------------- 566
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
++ Y S I D+A LY++M + + VT L CK +
Sbjct: 567 ------DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSA 620
Query: 475 EALSFMEEMMHLKLPVSKEVYSSI-------LCAYSKQGQIVEAESTFNLMKSSGCSPDV 527
A+ +E P+ K+++ LC+ K G A F + S D
Sbjct: 621 NAMILLE-------PLDKKLWIRTVRTLVRKLCSEKKVGV---AALFFQKLLEKDSSADR 670
Query: 528 VTYTSMLDAYTAAGKMNF 545
VT + A + +GK N
Sbjct: 671 VTLAAFTTACSESGKNNL 688
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 217/507 (42%), Gaps = 71/507 (14%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEM-QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+N+++ + +++ A G+ M E++ PD TYN ++ A + G+ ++ DM
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + P+R TYNNL+ G+ KEA + + M V PDL T+NIL++ +
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIH-CL-------------------VKLRQYDKAID 231
+ L + MK ++PD T N +I C VK Q I
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 232 IFNSMREKKSEC--------------HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
+ +E+K E PD+V+Y ++I Y G + M +G
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
IK + ++ N ++ A EA + N + GF D V+Y +L+ + R +K +KA
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+++ +K+ K+ P + ++N+LI +G + A++ E+ + G+ P+
Sbjct: 507 EMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD----------- 555
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+NS I Y G +KA Y K K D+
Sbjct: 556 ------------------------DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
T IL++G CK +AL+F ++ + V Y++++ A+ K ++ EA +
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 518 MKSSGCSPDVVTYTSMLDAYTAAGKMN 544
M+ G PD TY S + GK++
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDGKLS 677
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 226/475 (47%), Gaps = 7/475 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGR---AGQWRWAMNIM 128
++++ + + + A +F +M + KP+ T N L+ R + A +
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 129 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM-TDNGVGPDLVTHNILLSAFKS 187
DDM++ + + T+N L+N G ++AL + ++M ++ V PD VT+N +L A
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 188 GSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDV 247
+ S MK + P+ T N +++ KL +A I M K++ PD+
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM--KQTNVLPDL 310
Query: 248 VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
+Y +I+ +G + + M + ++P +V+YN L+ G+ EA + +
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQK-ARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
++ +G + + V++ L + +K + R V E++ + P++V+Y+ LI AY G
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYN 426
L A++++REM Q GI+ N +++ T+L A + + + +L++A RG ++ V Y
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 427 SAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHL 486
+ I + + +KAL ++ M+K KI T+ LI G C K A+ +E+
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 487 KLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
L ++SI+ Y K+G++ +A +N PD T +L+ G
Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 204/425 (48%), Gaps = 5/425 (1%)
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA---FKSG 188
L + PPS++ ++ ++A G AL + +KM + P+L+T N LL + S
Sbjct: 123 LHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSS 182
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
S A F+ M + + T N++++ + + A+ + M + + +PD V
Sbjct: 183 FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV-SEFKVNPDNV 241
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
+Y +I+ S G++ + + M G+ P+ V+YN LV Y G KEA + +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
KQ PD+ +Y L+N + ++ + + +K KL+P++V+YN LID GL
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 369 DDAIKILREMEQDGIQPNVVSI-CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNS 427
+A K++ +ME DG++ N V+ +L C ++ V M G + V Y++
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK 487
I +YL VG+ AL + + M +K IK +++T ++ CK K EA + +
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 488 LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEP 547
V + Y +++ + ++ ++ +A ++ MK +P V T+ S++ GK
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 548 LKYED 552
K+++
Sbjct: 542 EKFDE 546
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 209/488 (42%), Gaps = 25/488 (5%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN+++ + R++ L+ +M P T+N LI A + A + D+M
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM 173
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
P+ T+ L+ +G + L + M GV P+ V +N ++S+F +
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR--EKKSECHPDVVS 249
+ E M+ + PD T N I L K + A IF+ M E P+ ++
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
Y ++ + G +E+ + F + S+ SYN + HG EA V ++
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
G P I SY L++ + A+ + ++KRN + P+ V+Y L+ Y S G +D
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
A +L+EM ++ PN + LL + + + + E +L +G L+TV N +
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKA-----------------------DSVTYTILISG 466
GE DKA+ + K MR A D +TY+ L++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
CK ++ EA + EMM KL Y+ + + KQG+I A M+ GC
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 527 VVTYTSML 534
+ TY S++
Sbjct: 594 LETYNSLI 601
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 214/524 (40%), Gaps = 99/524 (18%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N++IR + +D AR LF EM E CKP+ T+ L+ + +AG + +++ M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGS-- 189
+ P++ YN ++++ G ++ + +KM + G+ PD+VT N +SA K G
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 190 QYSKALSYFELMKGTHI-RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
S+ S EL + + RP++ T N+++ K+ + A +F S+RE +
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD--LASLQ 327
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
SY + G+ E M +GI PSI SYN L+ GM +A + +
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN----------------- 351
K+NG PD V+Y LL+ Y K A+ + + + RN PN
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 352 ------------------LVSYNALIDAYGSNGLLDDAIKILREMEQDG----------- 382
V+ N ++D +G LD AI+I++ M G
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 383 ------------IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
P++++ TLL G C
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLN--GLCK----------------------------- 536
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
G + +A L+ M +K++ DSV Y I I CK K A +++M
Sbjct: 537 ----AGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
S E Y+S++ + QI E + MK G SP++ TY + +
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 214/465 (46%), Gaps = 17/465 (3%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN+M++ + ++ A+ LF ++E ++YN + R G++ A ++ M
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I PS +YN L++ G +A + M NGV PD VT+ LL + S +
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A S + M + P+ T NI++H L K+ + +A ++ M EK D V+
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL--DTVTCNI 471
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
I+ SG+++ E +K V +A +G +G LV + + +N
Sbjct: 472 IVDGLCGSGELDKA--------IEIVKGMRVHGSAALGNLGNSYIG----LVDDSLIENN 519
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PD+++Y++LLN ++ + +A+ +F + KL+P+ V+YN I + G + A
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++L++ME+ G ++ + +L+ G +Q +I ++ + +GI N YN+AI Y
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI-QY 638
Query: 433 LNVGE-YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
L GE + A L M +K I + ++ LI CK+ + A E + +
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQK 697
Query: 492 KEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
+ +YS + GQ+++A + G Y ++++
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 217/526 (41%), Gaps = 39/526 (7%)
Query: 17 LYDDIDGLLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIY 73
++ D++ L+ ++G R N + ++K + G +E +F+ ++ + + Y
Sbjct: 274 IFSDME--LDEYLG-LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS-Y 329
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+ ++ RH + +A + +M + P +YN L++ + G A I+ M R
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
+ P TY L++ S G A ++ ++M N P+ T NILL + + S+
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS------------ 241
A M DT T NI++ L + DKAI+I MR S
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 242 ---------ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
C PD+++Y+++++ +G+ + F M+ E ++P V+YN + +
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
G A V ++++ G + +Y SL+ G + + G+ + +K + PN+
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
+YN I ++DA +L EM Q I PNV S L+ A + + V
Sbjct: 630 CTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET 689
Query: 413 A-----QMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
A Q G+ Y+ L G+ KA L +++ + + + Y L+
Sbjct: 690 AVSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESL 743
Query: 468 CKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
CK + A + +M+ ++ K G EA S
Sbjct: 744 CKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANS 789
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 173/376 (46%), Gaps = 6/376 (1%)
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
P + +N+LL + + ++ M I P T T N++I L D A ++
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
F+ M EK C P+ ++ ++ Y +G + N M + G+ P+ V YN +V ++
Sbjct: 170 FDEMPEKG--CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL---- 348
G ++ + ++++ G PDIV++ S ++A + K A +F ++ ++
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET 408
+PN ++YN ++ + GLL+DA + + ++ ++ S L R + + ET
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 409 VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
VL +GI + +YN + +G A + M++ + D+VTY L+ G C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
+ K A S ++EMM + + +L + K G+I EAE M G D V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 529 TYTSMLDAYTAAGKMN 544
T ++D +G+++
Sbjct: 468 TCNIIVDGLCGSGELD 483
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 172/371 (46%), Gaps = 23/371 (6%)
Query: 178 HNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
HN++LS+ ++ S LS V+ K DKA F +R
Sbjct: 62 HNLILSSSIQKTKLSSLLS-------------------VVSIFAKSNHIDKAFPQFQLVR 102
Query: 238 EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGM 297
+ E P V Y ++ ++E + M+ GI P ++N L+ A
Sbjct: 103 SRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSC 162
Query: 298 GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNA 357
A +F+E+ + G +P+ ++ L+ Y ++ K + ++ + PN V YN
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 358 LIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC---GRCSQKGKIETVLSAAQ 414
++ ++ G DD+ K++ +M ++G+ P++V+ + ++A G+ +I + + +
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 415 MRGI-KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
G+ + N++ YN + + VG + A L++S+R+ A +Y I + G + K+
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
EA + +++M + S Y+ ++ K G + +A++ LMK +G PD VTY +
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 534 LDAYTAAGKMN 544
L Y + GK++
Sbjct: 403 LHGYCSVGKVD 413
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 212/461 (45%), Gaps = 26/461 (5%)
Query: 70 NDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMD 129
N I + ++ R RI + +GL +M D Y +LI+ + G A+ +
Sbjct: 469 NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAE 528
Query: 130 DMLRAAIPPSRSTYNNLINACGSSG----NWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
+M +P +YN LI+ G +W K M + G+ PD+ T NI++++
Sbjct: 529 EMQERGMPWDVVSYNVLISGMLKFGKVGADW-----AYKGMREKGIEPDIATFNIMMNSQ 583
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
+ L ++ MK I+P + NIV+ L + + ++AI I N M E HP
Sbjct: 584 RKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM--LMEIHP 641
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
++ +Y + S + + +L+ GIK S YN L+ GM K+A +V
Sbjct: 642 NLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVM 701
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
+++ GF PD V++ SL++ Y +KA + ++ + PN+ +YN +I
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
GL+ + K L EM+ G++P+ + L++ + T+ G+ T Y
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTY 821
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY------------ 473
N I + NVG+ +A L K M K+ + ++ TY +ISG CK+ +
Sbjct: 822 NVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYL 881
Query: 474 GEALSFMEEMMHLK--LPVSKEVYSSILCAYSKQGQIVEAE 512
EA ++EM+ K +P ++ +Y I A+SK G V+AE
Sbjct: 882 AEAKGLLKEMVEEKGYIPCNQTIY-WISAAFSKPGMKVDAE 921
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 233/537 (43%), Gaps = 31/537 (5%)
Query: 21 IDGLLNRWVGRFARKNFPFLIKE---------------LTQRGSIEHCNLVFQWMKNQRN 65
+DGL R A K F L+++ L + G + + M +++
Sbjct: 336 MDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML-EKS 394
Query: 66 YCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
Y+ MI + + +++A L +M++ P+ TY +I+ +AG+ A+
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
+ +M + + + L+N G KE + K M GV D + + L+ F
Sbjct: 455 ELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 514
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
G AL++ E M+ + D + N++I ++K + A + MREK E P
Sbjct: 515 FKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIE--P 571
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
D+ ++ +++ G E ++ M + GIKPS++S N +VG +G +EA+ +
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF---EMIKRNKLKPNLVSYNALIDAY 362
N++ P++ +Y L+ S K ++A +F E + +K + YN LI
Sbjct: 632 NQMMLMEIHPNLTTYRIFLDT---SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
G+ A ++ +ME G P+ V+ +L+ S K + S GI N
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 423 VAYNSAIGSYLNVG---EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
YN+ I + G E DK L M+ + ++ D TY LISG K+ +++
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLS---EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
EM+ L Y+ ++ ++ G++++A M G SP+ TY +M+
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 203/438 (46%), Gaps = 10/438 (2%)
Query: 104 DAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 163
D TYN +I+ G A + +M++ I P +YN LI+ GN+ A
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA---- 215
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
K + D +L+TH ILLS++ + +A + M + PD T + +I+ L K
Sbjct: 216 KALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKG 272
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIV 283
+ + + M E +P+ V+YT+++ + + A ++ M+ GI +V
Sbjct: 273 GKVLEGGLLLREMEEM--SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLV 330
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMI 343
Y L+ G +EA F + ++ P++V+YT+L++ ++ A + +
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
+ PN+V+Y+++I+ Y G+L++A+ +LR+ME + PN + T++ + ++
Sbjct: 391 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 450
Query: 404 GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
+ ++ G++ N ++ + +G + GL K M K + D + YT L
Sbjct: 451 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 510
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGC 523
I K AL++ EEM +P Y+ ++ K G+ V A+ + M+ G
Sbjct: 511 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGI 569
Query: 524 SPDVVTYTSMLDAYTAAG 541
PD+ T+ M+++ G
Sbjct: 570 EPDIATFNIMMNSQRKQG 587
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 200/456 (43%), Gaps = 49/456 (10%)
Query: 87 DQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNL 146
DQ ++ +M PD N LI++ + G+ +A++++ + + I TYN +
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTV 167
Query: 147 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
I+ G EA +M G+ PD V++N L+ F + +A + +
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVD------- 220
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK-KSECHPDVVSYTSIIHLYSVSGQIEN 265
+ + LN++ H ++ L Y I + R+ S PDVV+++SII+ G++
Sbjct: 221 --EISELNLITHTIL-LSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLE 277
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
M + P+ V+Y LV + + + AL +++++ G D+V YT L++
Sbjct: 278 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 337
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
++ ++A F+M+ + PN+V+Y AL+D G L A I+ +M + + P
Sbjct: 338 GLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIP 397
Query: 386 NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
NVV+ Y+S I Y+ G ++A+ L
Sbjct: 398 NVVT-----------------------------------YSSMINGYVKKGMLEEAVSLL 422
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQ 505
+ M + + + TY +I G K K A+ +EM + + + + +++ +
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRI 482
Query: 506 GQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
G+I E + M S G + D + YTS++D + G
Sbjct: 483 GRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 216/508 (42%), Gaps = 40/508 (7%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+Y +++ + + +A F + E P+ TY AL++ +AG A I+ M
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA-FKSGSQ 190
L ++ P+ TY+++IN G +EA+++ +KM D V P+ T+ ++ FK+G +
Sbjct: 391 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 450
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCL--------------------VKLRQ--YDK 228
A+ + M+ + + L+ +++ L V L Q Y
Sbjct: 451 -EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 509
Query: 229 AIDIF-------------NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
ID+F M+E+ DVVSY +I G++ + A+ M
Sbjct: 510 LIDVFFKGGDEEAALAWAEEMQERGMPW--DVVSYNVLISGMLKFGKV-GADWAYKGMRE 566
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+GI+P I ++N ++ + G + L +++++K G +P ++S ++ + K ++
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A + + ++ PNL +Y +D + D K + GI+ + TL+A
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
+ K V+ + RG +TV +NS + Y KAL Y M + I
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
+ TY +I G E ++ EM + Y++++ +K G + + + +
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 806
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
M + G P TY ++ + GKM
Sbjct: 807 CEMIADGLVPKTSTYNVLISEFANVGKM 834
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 152/340 (44%), Gaps = 48/340 (14%)
Query: 206 IRPDTTTLNIVIHCL-VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
+ PD+ N +IH V +D+ I++ M PDV + +IH + G++
Sbjct: 89 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM--IACGVSPDVFALNVLIHSFCKVGRLS 146
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
A +++ I V+YN ++ HG+ EA +E+ + G PD VSY +L+
Sbjct: 147 ---FAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
+ + + +A+ + + I + NL+++ L+ +Y + +++A R+M G
Sbjct: 204 DGFCKVGNFVRAKALVDEIS----ELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFD 256
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
P+VV+ +++ R + GK VL L
Sbjct: 257 PDVVTFSSII---NRLCKGGK---VLEGGL-----------------------------L 281
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ M + + + VTYT L+ K + Y AL+ +M+ +PV VY+ ++ K
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
G + EAE TF ++ P+VVTYT+++D AG ++
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 381
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 226/510 (44%), Gaps = 74/510 (14%)
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 165
ETY ++I A + G A+ +MD+M+ IP S +L+N +AL++ +
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQ 225
M + G+ PD V ++++ F + KA+ ++ MK I P + ++ +I +K
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 226 YDKAIDIFNS---------------------------------MREKKSECHPDVVSYTS 252
+ A++IFN M E+K P+VV Y +
Sbjct: 431 PEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG-IEPNVVFYNN 489
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++ + ++ + F+ ML +G++P+ +Y+ L+ + + + A V N++ +
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFE-MIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
F + V Y +++N + + KA+ + + +IK + + SYN++ID + G D A
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA 609
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRC----------------SQKGKIE-------- 407
++ REM ++G PNVV+ +L+ G C S + K++
Sbjct: 610 VETYREMSENGKSPNVVTFTSLIN--GFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667
Query: 408 -------------TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
T+ S G+ N YNS I + N+G+ D A+ LYK M I
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
D TYT +I G K A E++ L + + ++ ++ SK+GQ ++A
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKM 787
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
MK +P+V+ Y++++ + G +N
Sbjct: 788 LEEMKKKDVTPNVLLYSTVIAGHHREGNLN 817
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 229/486 (47%), Gaps = 33/486 (6%)
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML-R 133
+++R R + ++A +F + +PD ++ + A + A++++ +M +
Sbjct: 244 LLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGK 303
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
+P S+ TY ++I A GN +EA+ V +M G+ ++ L++ + G++ K
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
AL F M+ + PD ++++ K + +KAI+ + MR K P V +
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY--MRMKSVRIAPSSV----L 417
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG-MGKEALLVFNE----- 307
+H I+ C + AE + ++ +N ++ AHG M + L+F +
Sbjct: 418 VH-----TMIQGC------LKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVD 466
Query: 308 --------IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
++Q G P++V Y +++ A+ R + AR +F + L+PN +Y+ LI
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL-SAAQMRGI 418
D + N +A ++ +M + N V T++ + Q K + +L + + +
Sbjct: 527 DGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
++ +YNS I ++ VG+ D A+ Y+ M + + VT+T LI+G CK ++ AL
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
EM ++L + Y +++ + K+ + A + F+ + G P+V Y S++ +
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 539 AAGKMN 544
GKM+
Sbjct: 707 NLGKMD 712
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/560 (22%), Positives = 238/560 (42%), Gaps = 75/560 (13%)
Query: 49 SIEHCNLVFQWMKNQRNYCARNDIYNMMIRL-------HAR------------------- 82
++++CN W+K C D++ ++I + H R
Sbjct: 96 ALQYCN----WVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNV 151
Query: 83 --HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR 140
+N +D ++ FE+ P A +N L+NA+ R + +A++ M+ + P
Sbjct: 152 MVNNLVDSSKRFGFELT-----PRA--FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFV 204
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
NN++++ S EA + KM GV D VT +L+ A + +A+ F
Sbjct: 205 PYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRR 264
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
+ PD ++ + K A+D+ MR K +YTS+I +
Sbjct: 265 VMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLG-VPASQETYTSVIVAFVKE 323
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G +E + M+ GI S+++ +LV Y +AL +FN +++ G PD V +
Sbjct: 324 GNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMF 383
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI-----------------DAYG 363
+ ++ + ++ + +KA + +K ++ P+ V + +I D++
Sbjct: 384 SVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE 443
Query: 364 S-----------------NGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
S G +D A L+ MEQ GI+PNVV ++ A R
Sbjct: 444 SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLA 503
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
++ S +G++ N Y+ I + + A + M +A+ V Y +I+G
Sbjct: 504 RSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIING 563
Query: 467 SCKMSKYGEALSFMEEMMHLK-LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
CK+ + +A ++ ++ K +S Y+SI+ + K G A T+ M +G SP
Sbjct: 564 LCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSP 623
Query: 526 DVVTYTSMLDAYTAAGKMNF 545
+VVT+TS+++ + + +M+
Sbjct: 624 NVVTFTSLINGFCKSNRMDL 643
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 183/394 (46%), Gaps = 3/394 (0%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N + L + ++D A M++ +P+ YN ++ AH R A +I +ML
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
+ P+ TY+ LI+ + + + A +V +M + + V +N +++ Q SK
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 194 ALSYFE-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A + L+K T+ N +I VK+ D A++ + M E P+VV++TS
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS--PNVVTFTS 630
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I+ + S +++ + M + +K + +Y AL+ + K A +F+E+ + G
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P++ Y SL++ + K A +++ + + + +L +Y +ID +G ++ A
Sbjct: 691 LMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLAS 750
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+ E+ GI P+ + L+ + Q K +L + + + N + Y++ I +
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGH 810
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
G ++A L+ M +K I D + +L+SG
Sbjct: 811 HREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 128/300 (42%), Gaps = 4/300 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
+I L + G + Q + ++ Y YN +I + D A + EM E
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P+ T+ +LIN ++ + A+ + +M + Y LI+ + K A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ ++ + G+ P++ +N L+S F++ + A+ ++ M I D T +I
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
L+K + A D+++ + + PD + + +++ S GQ M + +
Sbjct: 740 LLKDGNINLASDLYSELLDLG--IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVT 797
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
P+++ Y+ ++ + G EA + +E+ + G D + L++ GR +KP A +
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS--GRVEKPPAASKI 855
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 206/428 (48%), Gaps = 9/428 (2%)
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
M+++ PS ++ +++ S N+ +++ M G+G DL ++NI+++ S+
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+ ALS M PD T++ +I+ + + AID+ + M E PDVV Y
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF--RPDVVIY 177
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
+II G + + F+ M +G++ V+YN+LV G +A + ++
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
P+++++T++++ + + K +A ++E + R + P++ +YN+LI+ +G +D+
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
A ++L M G P+VV+ TL+ + + + + RG+ +T+ YN+ I
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
Y G D A ++ M + + TY+IL+ G C + +AL E M ++ +
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKY 550
Y+ ++ K G + +A F + G PDVV+YT+M+ + + + L Y
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 551 ----EDGF 554
EDG
Sbjct: 475 RKMQEDGL 482
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 220/476 (46%), Gaps = 16/476 (3%)
Query: 4 TVSEVAEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSI---EHCNLVFQWM 60
+++ A + L+L L + ++ ++ RF + F T+R S+ E +L F M
Sbjct: 8 SIASKANKFLNLCLLQKGNPVIVPFISRFWGRTFS------TKRSSMNLEEEIDL-FCKM 60
Query: 61 KNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQ 120
R + D ++ ++ A+ D LF M+ D +YN +IN R +
Sbjct: 61 IQSRPLPSIVDFSKVLSKI-AKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 121 WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI 180
+ A++++ M++ P T ++LIN +A+++ KM + G PD+V +N
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
++ + A+ F+ M+ +R D T N ++ L ++ A + M +
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR- 238
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
+ P+V+++T++I ++ G+ + M + P + +YN+L+ HG E
Sbjct: 239 -DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
A + + + G PD+V+Y +L+N + +S++ + +F + + L + ++YN +I
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
Y G D A +I M+ +PN+ + LL + K + Q I+L
Sbjct: 358 GYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 414
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
+ YN I +G + A L++S+ K +K D V+YT +ISG C+ ++ ++
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 170/343 (49%), Gaps = 5/343 (1%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
+I + NR+ A L +M+E +PD YN +I+ + G A+ + D M R
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
+ TYN+L+ SG W +A + + M + P+++T ++ F ++S+A+
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
+E M + PD T N +I+ L + D+A + + M K C PDVV+Y ++I+
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG--CLPDVVTYNTLIN 322
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
+ S +++ F M G+ ++YN ++ Y G A +F+ + RP
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RP 379
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
+I +Y+ LL + + +KA +FE +++++++ ++ +YN +I G ++DA +
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
R + G++P+VVS T+++ R Q K + + Q G+
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 157/314 (50%), Gaps = 5/314 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IYN +I + ++ A LF M+ + DA TYN+L+ +G+W A +M DM
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I P+ T+ +I+ G + EA+ + ++MT V PD+ T+N L++ +
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A +LM PD T N +I+ K ++ D+ +F M ++ D ++Y
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG--LVGDTITYN 353
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+II Y +G+ + + F+ M + +P+I +Y+ L+ + ++AL++F ++++
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
DI +Y +++ + + A +F + LKP++VSY +I + D +
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 372 IKILREMEQDGIQP 385
+ R+M++DG+ P
Sbjct: 471 DLLYRKMQEDGLLP 484
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 146/318 (45%), Gaps = 37/318 (11%)
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
++ ID+F M + + P +V ++ ++ + S + + F+ M GI + SYN
Sbjct: 51 EEEIDLFCKMIQSRP--LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
++ AL V ++ + G+ PD+V+ +SL+N + + + A + ++
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
+P++V YN +ID GL++DA+++ ME+DG++ + V+
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT----------------- 211
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
YNS + G + A L + M + I + +T+T +I
Sbjct: 212 ------------------YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
K K+ EA+ EEM + Y+S++ G++ EA+ +LM + GC PD
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 527 VVTYTSMLDAYTAAGKMN 544
VVTY ++++ + + +++
Sbjct: 314 VVTYNTLINGFCKSKRVD 331
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 120/262 (45%), Gaps = 39/262 (14%)
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
+E + +F ++ Q+ P IV ++ +L+ +S+ +F ++ + +L SYN +
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR-- 416
I+ A+ ++ +M + G +P+VV++ +L+ G C + + ++M
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN--GFCQGNRVFDAIDLVSKMEEM 168
Query: 417 GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
G + + V YN+ I +G + A+ L+ M + ++AD+VTY L++G C ++ +A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 477 LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
M +M V +++ P+V+T+T+++D
Sbjct: 229 ARLMRDM------VMRDIV-----------------------------PNVITFTAVIDV 253
Query: 537 YTAAGKMNFEPLKYEDGFWKCM 558
+ GK + YE+ +C+
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCV 275
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 205/452 (45%), Gaps = 6/452 (1%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
PD + INA + G+ A+ + M A + P+ T+N +I+ G G + EA
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
+KM + G+ P L+T++IL+ + A + M P+ N +I ++
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
+KAI+I + M K +Y ++I Y +GQ +N E ML+ G +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
S+ +++ +H M AL E+ P T+L++ + K KA ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+ + NAL+ G LD+A +I +E+ G + VS TL++ C C +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC--CGK 553
Query: 403 KGKIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
K E + +M RG+K + Y+ I N+ + ++A+ + ++ + D TY
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
+++I G CK + E F +EMM + + VY+ ++ AY + G++ A MK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 521 SGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
G SP+ TYTS++ + ++ L +E+
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 217/509 (42%), Gaps = 39/509 (7%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
++ I + ++++A LF +M+E P+ T+N +I+ G G++ A + M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + P+ TY+ L+ + +A V K+MT G P+++ +N L+ +F
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+KA+ +LM + ++T N +I K Q D A + M + S+T
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG--SFT 439
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
S+I L ++ ML + P L+ HG +AL ++ +
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 312 GFRPDIVSYTSLLNAYG---------RSQKPQKARGVF---------------------- 340
GF D + +LL+ R QK RG
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 341 -----EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
EM+KR LKP+ +Y+ LI + +++AI+ + +++G+ P+V + ++
Sbjct: 560 FMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
C + + + + + ++ NTV YN I +Y G AL L + M+ K I
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
+S TYT LI G +S+ EA EEM L + Y++++ Y K GQ+V+ E
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
M S P+ +TYT M+ Y G +
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVT 767
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 215/475 (45%), Gaps = 39/475 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y+++++ R RI A + EM + P+ YN LI++ AG A+ I D M+
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD----------LVTHNI-- 180
+ + STYN LI +G A + K+M G + L +H +
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 181 -------------------LLSAFKSG----SQYSKALS-YFELMKGTHIRPDTTTLNIV 216
LL+ SG ++SKAL +F+ + + DT T N +
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV-VDTRTSNAL 511
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+H L + + D+A I + + C D VSY ++I +++ + M+
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRG--CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G+KP +Y+ L+ +EA+ +++ K+NG PD+ +Y+ +++ ++++ ++
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
+ F+ + ++PN V YN LI AY +G L A+++ +M+ GI PN + +L+
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
S+ + + + +M G++ N Y + I Y +G+ K L + M K + +
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEA 511
+TYT++I G + EA + EM + Y + Y KQG ++EA
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 161/351 (45%), Gaps = 3/351 (0%)
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
AL F ++ + P TT NI++ LV+ ++ K + F+ + + S PDV +T+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS---PDVYLFTTA 266
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I+ + G++E F+ M G+ P++V++N ++ G EA + ++ + G
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK 373
P +++Y+ L+ R+++ A V + + + PN++ YN LID++ G L+ AI+
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
I M G+ + TL+ + Q E +L G +N ++ S I
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
+ +D AL M + + T LISG CK K+ +AL + ++ V
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 494 VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+++L + G++ EA + GC D V+Y +++ K++
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 205/452 (45%), Gaps = 6/452 (1%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
PD + INA + G+ A+ + M A + P+ T+N +I+ G G + EA
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
+KM + G+ P L+T++IL+ + A + M P+ N +I ++
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
+KAI+I + M K +Y ++I Y +GQ +N E ML+ G +
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
S+ +++ +H M AL E+ P T+L++ + K KA ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+ + NAL+ G LD+A +I +E+ G + VS TL++ C C +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC--CGK 553
Query: 403 KGKIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
K E + +M RG+K + Y+ I N+ + ++A+ + ++ + D TY
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
+++I G CK + E F +EMM + + VY+ ++ AY + G++ A MK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 521 SGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
G SP+ TYTS++ + ++ L +E+
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 217/509 (42%), Gaps = 39/509 (7%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
++ I + ++++A LF +M+E P+ T+N +I+ G G++ A + M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + P+ TY+ L+ + +A V K+MT G P+++ +N L+ +F
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+KA+ +LM + ++T N +I K Q D A + M + S+T
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG--SFT 439
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
S+I L ++ ML + P L+ HG +AL ++ +
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 312 GFRPDIVSYTSLLNAYG---------RSQKPQKARGVF---------------------- 340
GF D + +LL+ R QK RG
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 341 -----EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
EM+KR LKP+ +Y+ LI + +++AI+ + +++G+ P+V + ++
Sbjct: 560 FMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
C + + + + + ++ NTV YN I +Y G AL L + M+ K I
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
+S TYT LI G +S+ EA EEM L + Y++++ Y K GQ+V+ E
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
M S P+ +TYT M+ Y G +
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVT 767
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 215/475 (45%), Gaps = 39/475 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y+++++ R RI A + EM + P+ YN LI++ AG A+ I D M+
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD----------LVTHNI-- 180
+ + STYN LI +G A + K+M G + L +H +
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 181 -------------------LLSAFKSG----SQYSKALS-YFELMKGTHIRPDTTTLNIV 216
LL+ SG ++SKAL +F+ + + DT T N +
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV-VDTRTSNAL 511
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+H L + + D+A I + + C D VSY ++I +++ + M+
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRG--CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G+KP +Y+ L+ +EA+ +++ K+NG PD+ +Y+ +++ ++++ ++
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
+ F+ + ++PN V YN LI AY +G L A+++ +M+ GI PN + +L+
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
S+ + + + +M G++ N Y + I Y +G+ K L + M K + +
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEA 511
+TYT++I G + EA + EM + Y + Y KQG ++EA
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 161/351 (45%), Gaps = 3/351 (0%)
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
AL F ++ + P TT NI++ LV+ ++ K + F+ + + S PDV +T+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS---PDVYLFTTA 266
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I+ + G++E F+ M G+ P++V++N ++ G EA + ++ + G
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK 373
P +++Y+ L+ R+++ A V + + + PN++ YN LID++ G L+ AI+
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
I M G+ + TL+ + Q E +L G +N ++ S I
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
+ +D AL M + + T LISG CK K+ +AL + ++ V
Sbjct: 447 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 506
Query: 494 VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+++L + G++ EA + GC D V+Y +++ K++
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 214/489 (43%), Gaps = 39/489 (7%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F W Q Y +Y M+ + ++ +R + M+ E ++ ++ ++
Sbjct: 194 FYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYS 253
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
RAGQ R A+ ++ M RA + P+ N I+ + ++AL ++M G+ P++V
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 177 THNILLSAFKSGSQYSKAL----------------SYFELM------------------- 201
T+N ++ + + +A+ SY+ +M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 202 -KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
K + PD T N +IH L K D+A+ +EK D + Y++I+H
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI--DKLGYSAIVHALCKE 431
Query: 261 GQIENCEAAFNMMLAEG-IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
G++ + N ML++G P +V+Y A+V + G +A + + +G +P+ VS
Sbjct: 432 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
YT+LLN R+ K +AR + M + + PN ++Y+ ++ G L +A ++REM
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
G P V I LL + R + + + +G +N V + + I + E D
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 611
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
AL + M AD TYT L+ K + EA M++M+H + + Y +++
Sbjct: 612 AALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Query: 500 CAYSKQGQI 508
Y + G++
Sbjct: 672 HRYCQMGKV 680
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 211/509 (41%), Gaps = 39/509 (7%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
I N I + R NR+++A MQ P+ TYN +I + + A+ +++DM
Sbjct: 279 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-DNGVGPDLVTHNILLSAFKSGSQ 190
P + +Y ++ E ++ KKM ++G+ PD VT+N L+
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+AL + + + R D + ++H L K + +A D+ N M K C PDVV+Y
Sbjct: 399 ADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK-GHCPPDVVTY 457
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG-------------------- 290
T++++ + G+++ + +M G KP+ VSY AL+
Sbjct: 458 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE 517
Query: 291 ----------AYAAHGMGKEALL-----VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+ HG+ +E L V E+ GF P V LL + R + +
Sbjct: 518 HWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 577
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
AR E N+V++ +I + N LD A+ +L +M +V + TL+
Sbjct: 578 ARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 637
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
G+ + + ++ +GI V Y + I Y +G+ D + + + M ++ K
Sbjct: 638 TLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ-KC 696
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
++ Y +I C + K EA + + +++ + +++ Y K+G + A
Sbjct: 697 RTI-YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVA 755
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
M + PDV + GK++
Sbjct: 756 CRMFNRNLIPDVKMCEKLSKRLVLKGKVD 784
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 198/412 (48%), Gaps = 4/412 (0%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A+ + DM + PS ++ L+ A ++ +++ + + G+ DL + L+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
F ++ S ALS M P T +++ + ++ +A+ + + + E
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE- 181
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
P+VV Y +II GQ+ M GI+P +V+YN+L+ G +
Sbjct: 182 -PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAY 362
+ +++ + G PD++++++L++ YG+ + +A+ + EMI+R+ + PN+V+YN+LI+
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS-VNPNIVTYNSLINGL 299
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
+GLLD+A K+L + G PN V+ TL+ + + +L G+ +T
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
YN+ Y G++ A + M + D T+ IL+ G C K G+AL +E+
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ K V Y+ I+ K ++ +A F + G SPDV+TY +M+
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 185/403 (45%), Gaps = 2/403 (0%)
Query: 81 ARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR 140
A+ N+ + LF ++ D ++ LI+ R + A++ + M++ PS
Sbjct: 90 AKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSI 149
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
T+ +L+N + EA+++ ++ G P++V +N ++ + Q + AL +
Sbjct: 150 VTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKH 209
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
MK IRPD T N +I L + + I + M + PDV++++++I +Y
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM--MRMGISPDVITFSALIDVYGKE 267
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
GQ+ + +N M+ + P+IV+YN+L+ HG+ EA V N + GF P+ V+Y
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
+L+N Y ++++ + ++ R+ + + +YN L Y G A K+L M
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
G+ P++ + LL + GK L Q + + YN I + +
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
A L+ S+ K + D +TY ++ G + + EA +M
Sbjct: 448 AWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 174/363 (47%), Gaps = 2/363 (0%)
Query: 190 QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
+++ AL+ F M +H P + ++ + KL +Y+ I +F + E H D+ S
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISH-DLYS 116
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
+T++I + ++ + M+ G +PSIV++ +LV + EA+ + ++I
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
G+ P++V Y +++++ + A V + +K+ ++P++V+YN+LI +G
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
+ +IL +M + GI P+V++ L+ G+ Q + + + R + N V YNS I
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
G D+A + + K ++VTY LI+G CK + + + + M +
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLK 549
Y+++ Y + G+ AE M S G PD+ T+ +LD GK+ ++
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 550 YED 552
ED
Sbjct: 417 LED 419
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 146/315 (46%), Gaps = 3/315 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IYN +I +++ A + M++ +PD TYN+LI +G W + I+ DM
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+R I P T++ LI+ G G EA +M V P++VT+N L++
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A ++ P+ T N +I+ K ++ D + I M + D +Y
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM--SRDGVDGDTFTYN 363
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++ Y +G+ E M++ G+ P + ++N L+ HG +AL+ +++++
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
I++Y ++ ++ K + A +F + + P++++Y ++ L +A
Sbjct: 424 KTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREA 483
Query: 372 IKILREME-QDGIQP 385
++ R+M+ +DG+ P
Sbjct: 484 HELYRKMQKEDGLMP 498
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 191/396 (48%), Gaps = 8/396 (2%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA---HGRAGQWRWAMNIM 128
+YN I + R D A ++ M + PD T LI GR+ + W I
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVW--EIF 332
Query: 129 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
+ M + S+ + L+ + G +EAL + +M G+ + + +N L+ A+
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
+ + F M+ ++P T NI++ + Q D + M + E P+V
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE--PNVK 450
Query: 249 SYTSIIHLYSVSGQIENCEA-AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
SYT +I Y + ++ + A AF M G+KPS SY AL+ AY+ G ++A F E
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
+ + G +P + +YTS+L+A+ RS K +++++ R K+K ++YN L+D + GL
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNS 427
+A ++ E + G+QP+V++ L+ A R Q K+ +L +K +++ Y++
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
I +++ V ++ +A +K M K D +Y L
Sbjct: 631 MIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 175/339 (51%), Gaps = 10/339 (2%)
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ-IENCE 267
D N I L ++YD A +++ +M K +PD V+ +I +G+ +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAM--DKINVYPDNVTCAILITTLRKAGRSAKEVW 329
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
F M +G+K S + LV ++ G+ +EAL++ E+++ G R + + Y +L++AY
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
+S ++ G+F ++ LKP+ +YN L+DAY D +LREME G++PNV
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMR----GIKLNTVAYNSAIGSYLNVGEYDKALG 443
S L++A GR K+ + + A +R G+K ++ +Y + I +Y G ++KA
Sbjct: 450 KSYTCLISAYGRTK---KMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 444 LYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYS 503
++ M K+ IK TYT ++ + G+ + + M+ K+ ++ Y+++L ++
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Query: 504 KQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
KQG +EA + G P V+TY +++AY G+
Sbjct: 567 KQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 177/397 (44%), Gaps = 39/397 (9%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQYSKALSYFELM 201
YN I+ +S + +A V + M V PD VT IL++ K+G + FE M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
++ ++ ++A+ I M +K + + Y +++ Y+ S
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKG--IRSNTIVYNTLMDAYNKSN 393
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
IE E F M +G+KPS +YN L+ AYA + E++ G P++ SYT
Sbjct: 394 HIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 322 SLLNAYGRSQK-PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
L++AYGR++K A F +K+ LKP+ SY ALI AY +G + A EM +
Sbjct: 454 CLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK 513
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
+GI+P+V + ++L A R GK+
Sbjct: 514 EGIKPSVETYTSVLDAFRRSGDTGKL---------------------------------- 539
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
+ ++K M ++KIK +TY L+ G K Y EA + E + L S Y+ ++
Sbjct: 540 -MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMN 598
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAY 537
AY++ GQ + M + PD +TY++M+ A+
Sbjct: 599 AYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 155/333 (46%), Gaps = 39/333 (11%)
Query: 31 RFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQAR 90
++++ F L+K G E LV Q ++ + +YN ++ + + N I++
Sbjct: 341 KWSQDVFGGLVKSFCDEGLKEEA-LVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVE 399
Query: 91 GLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINAC 150
GLF EM++ KP A TYN L++A+ R R +I++ +LR
Sbjct: 400 GLFTEMRDKGLKPSAATYNILMDAYAR----RMQPDIVETLLR----------------- 438
Query: 151 GSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK-ALSYFELMKGTHIRPD 209
+M D G+ P++ ++ L+SA+ + S A F MK ++P
Sbjct: 439 --------------EMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPS 484
Query: 210 TTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAA 269
+ + +IH ++KA F M K P V +YTS++ + SG
Sbjct: 485 SHSYTALIHAYSVSGWHEKAYASFEEM--CKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 270 FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
+ +ML E IK + ++YN L+ +A G+ EA V +E + G +P +++Y L+NAY R
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 330 SQKPQKARGVFEMIKRNKLKPNLVSYNALIDAY 362
+ K + + + LKP+ ++Y+ +I A+
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 46/324 (14%)
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEA----LLVFNEIKQNGFRP 315
SG +++C + M + +PS+ S A + G + A LL+ N + FR
Sbjct: 215 SGFVKSCLYFYEWMSLQ--EPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFR- 271
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS--------------------- 354
D+ Y + ++ SQ+ A V+E + + + P+ V+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 355 ---------------YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
+ L+ ++ GL ++A+ I EME+ GI+ N + TL+ A +
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
+ ++E + + + +G+K + YN + +Y + D L + M ++ + +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 460 YTILISGSCKMSKYGE--ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
YT LIS + K + A +F+ M + L S Y++++ AYS G +A ++F
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFL-RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 518 MKSSGCSPDVVTYTSMLDAYTAAG 541
M G P V TYTS+LDA+ +G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSG 534
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK-IETVLSAA 413
YNA I ++ DDA ++ M++ + P+ V+ L+ + + K + +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 414 QMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
+G+K + + + S+ + G ++AL + M KK I+++++ Y L+ K +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
E EM L S Y+ ++ AY+++ Q E+ M+ G P+V +YT +
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 534 LDAYTAAGKMN 544
+ AY KM+
Sbjct: 456 ISAYGRTKKMS 466
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/583 (21%), Positives = 254/583 (43%), Gaps = 64/583 (10%)
Query: 24 LLNRWVGRFARKNFPFLIKE------------------LTQRGSIEHCNLVFQWMKNQRN 65
LL RW GR N L+ E L + G ++ V M + +
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 66 YCARNDIYNMMIRLHARHNRI---DQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
N I ++ R+ ++ L P++ I++ + +
Sbjct: 217 VFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARAN 276
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
A +I+ D+++ P +N L++ G + + ++ KM + + PD+VT IL+
Sbjct: 277 AAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 183 SAFKSGSQYSKALSYFELMKGTH------IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
+ + +AL FE M+G I+ D+ N +I L K+ + +A ++ M
Sbjct: 337 NTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+ ++ C P+ V+Y +I Y +G++E + + M + IKP++V+ N +VG H
Sbjct: 397 KLEE-RCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNA------------------------------ 326
A++ F ++++ G + ++V+Y +L++A
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 327 -----YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+ ++ A V E +K +L++YN LI + + ++L +ME++
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKE 575
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
G +P+ ++ TL++ G+ +E ++ + G+ Y + I +Y +VGE D+A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 442 LGLYKSM-RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
L L+K M K+ ++V Y ILI+ K+ +G+ALS EEM + + E Y+++
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+++ Q + M C P+ +T +++ + + ++
Sbjct: 696 CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 121/286 (42%), Gaps = 3/286 (1%)
Query: 54 NLVFQWMKNQRNYCARNDIYNMMIRLHA--RHNRIDQARGLFFEMQEWRCKPDAETYNAL 111
N+ + + + ++ M +HA + +++A + +M E C PDA+ Y AL
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 112 INAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV 171
I+ + + A+ +++ + YN LI N ++ + M G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK 577
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
PD +T+N L+S F + E M+ + P TT VI + + D+A+
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+F M S+ +P+ V Y +I+ +S G + M + ++P++ +YNAL
Sbjct: 638 LFKDM-GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
G+ L + +E+ + P+ ++ L+ S + K R
Sbjct: 697 LNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLR 742
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 159/375 (42%), Gaps = 54/375 (14%)
Query: 175 LVTHNILLSAF-KSGSQYSKALSYFEL---MKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
+V N+L+ F + G L Y L MK + +R N+V+ L++ D A
Sbjct: 152 VVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR------NVVVDVLLRNGLVDDAF 205
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
+ + M +K+S P+ ++ ++H E +L E I+ AL+
Sbjct: 206 KVLDEMLQKESVFPPNRITADIVLH-----------EVWKGRLLTE---EKII---ALIS 248
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
+++HG+ P+ V T +++ ++ + A + + +NK
Sbjct: 249 RFSSHGVS----------------PNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPL 292
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
+NAL+ G N + ++ +M++ I+P+VV++ L+ C + E +
Sbjct: 293 EAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL--CKSRRVDEALE 350
Query: 411 SAAQMRG--------IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR-KKKIKADSVTYT 461
+MRG IK +++ +N+ I VG +A L M+ +++ ++VTY
Sbjct: 351 VFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYN 410
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
LI G C+ K A + M ++ + ++I+ + + A F M+
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 522 GCSPDVVTYTSMLDA 536
G +VVTY +++ A
Sbjct: 471 GVKGNVVTYMTLIHA 485
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQ-EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
Y +I + +D+A LF +M + P+ YN LINA + G + A+++ ++M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ P+ TYN L + L + +M + P+ +T IL+ +
Sbjct: 679 KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Query: 192 SKALSYFE 199
K + +
Sbjct: 739 VKLRKFMQ 746
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 242/543 (44%), Gaps = 71/543 (13%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWR-CKPDAETYNALINAHGRAGQWRWAMNIMDD 130
+Y++ ++ + + A L EM+E + C P ETY ++I A + G A+ + D+
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
ML I + +LI + + AL + KM G P+ VT ++L+ F+ +
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE------------ 238
KAL +++ M+ + P ++ +I +K +++++A+ +F+ E
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTI 449
Query: 239 --------KKSECH------------PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
K E P+VVSY +++ + ++ F+ +L +G+
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 279 KPSIVSYNALV-GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
KP+ +Y+ L+ G + H + AL V N + + + V Y +++N + + KAR
Sbjct: 510 KPNNYTYSILIDGCFRNHD-EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 338 GVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
+ MI+ +L + +SYN++ID + G +D A+ EM +GI PNV++ +L+
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVA-------------------------------- 424
+ ++ + + + +G+KL+ A
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 425 ---YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFME 481
YNS I + N+G AL LYK M K ++ D TYT LI G K A
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 482 EMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
EM + L + +Y+ I+ SK+GQ V+ F MK + +P+V+ Y +++ + G
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 542 KMN 544
++
Sbjct: 809 NLD 811
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 224/496 (45%), Gaps = 47/496 (9%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 145
+D A+ FE+ ++ +N L+NA+ + Q A++I++ ML + P N
Sbjct: 151 VDSAKSFGFEV-------NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNR 203
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
++A + EA + +M GV D VT +L+ A + ++AL
Sbjct: 204 TLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERG 263
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
PD+ ++ + K A + M+EKK C P +YTS+I G +++
Sbjct: 264 AEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKL-CVPSQETYTSVILASVKQGNMDD 322
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
+ ML++GI ++V+ +L+ + + AL++F+++++ G P+ V+++ L+
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAY----------------------- 362
+ ++ + +KA ++ ++ L P++ + +I +
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLAN 442
Query: 363 -----------GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK--IETV 409
G D+A ++L +ME GI PNVVS ++ G C QK V
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM--LGHCRQKNMDLARIV 500
Query: 410 LSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
S +G+K N Y+ I + AL + M I+ + V Y +I+G CK
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 470 MSKYGEALSFMEEMMHLK-LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
+ + +A + M+ K L VS Y+SI+ + K+G++ A + + M +G SP+V+
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 529 TYTSMLDAYTAAGKMN 544
TYTS+++ +M+
Sbjct: 621 TYTSLMNGLCKNNRMD 636
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 193/433 (44%), Gaps = 17/433 (3%)
Query: 49 SIEHCNLVFQ-WMKNQRNY-------------CARNDIYNMMIRLHARHNRIDQARGLFF 94
S+ H + + Q W+K Q++ A + N ++ + + D+A L
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLS 467
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 154
+M+ P+ +YN ++ H R A + ++L + P+ TY+ LI+ C +
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTTTL 213
+ + AL V MT + + + V + +++ Q SKA +++ + +
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N +I K + D A+ + M + P+V++YTS+++ + +++ + M
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEM--CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+G+K I +Y AL+ + + A +F+E+ + G P Y SL++ +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
A +++ + ++ L+ +L +Y LID +G L A ++ EM+ G+ P+ + +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ + Q K+ + + + N + YN+ I + G D+A L+ M K I
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 454 KADSVTYTILISG 466
D T+ IL+SG
Sbjct: 826 LPDGATFDILVSG 838
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 124/297 (41%), Gaps = 2/297 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
+I L + G + M ++ C YN +I + +D A + EM
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P+ TY +L+N + + A+ + D+M + Y LI+ N + A
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ ++ + G+ P +N L+S F++ AL ++ M +R D T +I
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
L+K A +++ M + PD + YT I++ S GQ F M +
Sbjct: 734 LLKDGNLILASELYTEM--QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
P+++ YNA++ + G EA + +E+ G PD ++ L++ + +P +A
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRA 848
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 148
A L+ EMQ PD Y ++N + GQ+ + + ++M + + P+ YN +I
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802
Query: 149 ACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALS 196
GN EA + +M D G+ PD T +IL+S Q +A S
Sbjct: 803 GHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAAS 850
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/583 (21%), Positives = 254/583 (43%), Gaps = 64/583 (10%)
Query: 24 LLNRWVGRFARKNFPFLIKE------------------LTQRGSIEHCNLVFQWMKNQRN 65
LL RW GR N L+ E L + G ++ V M + +
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 66 YCARNDIYNMMIRLHARHNRI---DQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
N I ++ R+ ++ L P++ I++ + +
Sbjct: 217 VFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARAN 276
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
A +I+ D+++ P +N L++ G + + ++ KM + + PD+VT IL+
Sbjct: 277 TAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 183 SAFKSGSQYSKALSYFELMKGTH------IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
+ + +AL FE M+G I+ D+ N +I L K+ + +A ++ M
Sbjct: 337 NTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+ ++ C P+ V+Y +I Y +G++E + + M + IKP++V+ N +VG H
Sbjct: 397 KLEE-RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNA------------------------------ 326
A++ F ++++ G + ++V+Y +L++A
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 327 -----YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+ ++ A V E +K +L++YN LI + + ++L +ME++
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
G +P+ ++ TL++ G+ +E ++ + G+ Y + I +Y +VGE D+A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 442 LGLYKSM-RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
L L+K M K+ ++V Y ILI+ K+ +G+ALS EEM + + E Y+++
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+++ Q + M C P+ +T +++ + + ++
Sbjct: 696 CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 220/525 (41%), Gaps = 94/525 (17%)
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR- 133
++IR R ++Q+ L +E + K +++ N +++ R G A ++D+ML+
Sbjct: 157 LLIRWFGRMGMVNQS-VLVYERLDSNMK-NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 134 -AAIPPSRSTYNNLINACGSSGNWKEAL-------NVCKKMTDNGVGPDLV--------- 176
+ PP+R T + +++ WKE L + + + +GV P+ V
Sbjct: 215 ESVFPPNRITADIVLHEV-----WKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 177 --------------------------THNILLSAFKSGSQYSKALSYFELMKGTHIRPDT 210
N LLS S+ M IRPD
Sbjct: 270 CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDV 329
Query: 211 TTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF 270
TL I+I+ L K R+ D+A+++F MR K+++ G +
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTD-----------------DGNV------- 365
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEA--LLVFNEIKQNGFRPDIVSYTSLLNAYG 328
IK + +N L+ G KEA LLV ++++ P+ V+Y L++ Y
Sbjct: 366 -------IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDGYC 417
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
R+ K + A+ V +K +++KPN+V+ N ++ + L+ A+ +ME++G++ NVV
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 389 SICTLLAACGRCSQKGKI----ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
+ TL+ AC S K E +L A G + Y + I V A+ +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEA----GCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ +++ D + Y +LI C + + + +M Y++++ + K
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLK 549
E M+ G P V TY +++DAY + G+++ E LK
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD-EALK 637
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 121/286 (42%), Gaps = 3/286 (1%)
Query: 54 NLVFQWMKNQRNYCARNDIYNMMIRLHA--RHNRIDQARGLFFEMQEWRCKPDAETYNAL 111
N+ + + + ++ M +HA + +++A + +M E C PDA+ Y AL
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 112 INAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV 171
I+ + + A+ +++ + YN LI N ++ + M G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
PD +T+N L+S F + E M+ + P TT VI + + D+A+
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+F M S+ +P+ V Y +I+ +S G + M + ++P++ +YNAL
Sbjct: 638 LFKDMG-LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
G+ L + +E+ + P+ ++ L+ S + K R
Sbjct: 697 LNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLR 742
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQ-EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
Y +I + +D+A LF +M + P+ YN LINA + G + A+++ ++M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ P+ TYN L + L + +M + P+ +T IL+ +
Sbjct: 679 KMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Query: 192 SKALSYFE 199
K + +
Sbjct: 739 VKLRKFMQ 746
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 181/350 (51%), Gaps = 5/350 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
++N +I + +DQA +F +M+E CKP A T+N LI +G+ G+ + ++D M
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 132 LR-AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGS 189
LR + P+ T N L+ A + +EA N+ KM GV PD+VT N L A+ + GS
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 190 QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
+ M ++P+ T +++ + + ++A+ F M+E HP++
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG--VHPNLFV 568
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
+ S+I + ++ ++M G+KP +V+++ L+ A+++ G K ++ ++
Sbjct: 569 FNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML 628
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
+ G PDI +++ L Y R+ +P+KA + +++ ++PN+V Y +I + S G +
Sbjct: 629 EGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMK 688
Query: 370 DAIKILREM-EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
A+++ ++M G+ PN+ + TL+ G Q K E +L + + +
Sbjct: 689 KAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 196/419 (46%), Gaps = 9/419 (2%)
Query: 68 ARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNI 127
+R + N +I R +A +F + E KP TY L+ A R + +++
Sbjct: 321 SRTKLMNGLIE----RGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 128 MDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKS 187
+ + + + P +N +INA SGN +A+ + +KM ++G P T N L+ +
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 188 GSQYSKALSYFELM-KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+ ++ ++M + ++P+ T NI++ R+ ++A +I M+ PD
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG--VKPD 494
Query: 247 VVSYTSIIHLYSVSGQIENCE-AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
VV++ ++ Y+ G E ML +KP++ + +V Y G +EAL F
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
+K+ G P++ + SL+ + V ++++ +KP++V+++ L++A+ S
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
G + +I +M + GI P++ + L R + K E +L+ + G++ N V Y
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIY 674
Query: 426 NSAIGSYLNVGEYDKALGLYKSM-RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
I + + GE KA+ +YK M + + TY LI G + + +A +++M
Sbjct: 675 TQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 203/443 (45%), Gaps = 3/443 (0%)
Query: 104 DAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 163
D + L+N G+ + A +I + ++ PS TY L+ A ++ L++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
K+ NG+ PD + N +++A +A+ FE MK + +P +T N +I K+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIV 283
+ +++ + + M + P+ + ++ + +IE M + G+KP +V
Sbjct: 438 GKLEESSRLLDMML-RDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 284 SYNALVGAYAAHGMGKEAL-LVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
++N L AYA G A ++ + N +P++ + +++N Y K ++A F
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+K + PNL +N+LI + + +D +++ ME+ G++P+VV+ TL+ A
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 403 KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
+ E + + GI + A++ Y GE +KA + MRK ++ + V YT
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676
Query: 463 LISGSCKMSKYGEALSFMEEMMHL-KLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
+ISG C + +A+ ++M + L + Y +++ + + Q +AE M+
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 522 GCSPDVVTYTSMLDAYTAAGKMN 544
P T + D + + G N
Sbjct: 737 NVVPTRKTMQLIADGWKSIGVSN 759
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 197/410 (48%), Gaps = 9/410 (2%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
L+N G +EA ++ + + G P L+T+ L++A + LS ++
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
++PDT N +I+ + D+A+ IF M+E S C P ++ ++I Y G++E
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKE--SGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 266 CEAAFNMMLA-EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
+MML E ++P+ + N LV A+ +EA + +++ G +PD+V++ +L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 325 NAYGRSQKPQKARG-VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
AY R A + + NK+KPN+ + +++ Y G +++A++ M++ G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 384 QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALG 443
PN+ +L+ + + V+ + G+K + V +++ + ++ +VG+ +
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 444 LYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYS 503
+Y M + I D ++IL G + + +A + +M + + +Y+ I+ +
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 504 KQGQIVEAESTFNLMKS-SGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
G++ +A + M G SP++ TY +++ + A +P K E+
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK----QPWKAEE 728
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 158/333 (47%), Gaps = 4/333 (1%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F LIK + G +E + + M + N++++ +I++A + ++M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMN-IMDDMLRAAIPPSRSTYNNLINACGSSGN 155
Q + KPD T+N L A+ R G A + I+ ML + P+ T ++N G
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+EAL +M + GV P+L N L+ F + + +LM+ ++PD T +
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
+++ + + +I+ M E PD+ +++ + Y+ +G+ E E N M
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLE--GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI-KQNGFRPDIVSYTSLLNAYGRSQKPQ 334
G++P++V Y ++ + + G K+A+ V+ ++ G P++ +Y +L+ +G +++P
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW 724
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
KA + + ++ + P + + D + S G+
Sbjct: 725 KAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 212/476 (44%), Gaps = 6/476 (1%)
Query: 56 VFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
VF M + CA N + Y+++I R+++A GL +M E C+P TY LI A
Sbjct: 252 VFDVMSKEVT-CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKA 310
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD 174
G A N+ D+M+ P+ TY LI+ G +EA VC+KM + + P
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
++T+N L++ + + A +M+ +P+ T N ++ L ++ + KA+ +
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
M + PD+VSY +I G + + M I+P +++ A++ A+
Sbjct: 431 RMLDNGLS--PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
G A + + G D V+ T+L++ + K + A + E + + ++ S
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
N ++D + + + +L ++ + G+ P+VV+ TL+ R +L +
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
+ G N Y I G ++A L +M+ + + VTYT+++ G K
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Query: 475 EALSFMEEMMHLKLPVSKEVYSSILCAY--SKQGQIVEAESTFNLMKSSGCSPDVV 528
AL + M+ ++ +YSS+L + S++G EST + + P+ +
Sbjct: 669 RALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI 724
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 201/439 (45%), Gaps = 7/439 (1%)
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
Y ++NA + G A M +L+ +L+ N ++AL V M+
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 168 -DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
+ P+ V+++IL+ + +A + M +P T T ++I L
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
DKA ++F+ M + C P+V +YT +I G+IE M+ + I PS+++YN
Sbjct: 318 DKAFNLFDEMIPRG--CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
AL+ Y G A + +++ +P++ ++ L+ R KP KA + + + N
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ-KGK 405
L P++VSYN LID G ++ A K+L M I+P+ ++ ++ A C Q K
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA--FCKQGKAD 493
Query: 406 IETVLSAAQMR-GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+ + +R GI L+ V + I VG+ AL + +++ K +I + +++
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
K K E L+ + ++ L L S Y++++ + G I + LMK SGC
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 525 PDVVTYTSMLDAYTAAGKM 543
P+V YT +++ G++
Sbjct: 614 PNVYPYTIIINGLCQFGRV 632
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 122/279 (43%), Gaps = 3/279 (1%)
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
+ M A+G ++ Y +V A +G + A + ++I + GF D TSLL +
Sbjct: 181 VTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGF 240
Query: 328 GRSQKPQKARGVFE-MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
R + A VF+ M K PN VSY+ LI G L++A + +M + G QP+
Sbjct: 241 CRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS 300
Query: 387 VVSICTLLAA-CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
+ L+ A C R K + RG K N Y I G+ ++A G+
Sbjct: 301 TRTYTVLIKALCDR-GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQ 505
+ M K +I +TY LI+G CK + A + M + ++ ++ +
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 506 GQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
G+ +A M +G SPD+V+Y ++D G MN
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G + + Y++L+ + A +G A + + ++ +GF ++ Y +++NA ++ + A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 337 RGVFEMIKRNKLKPNLV--SY--NALIDAYGSNGLLDDAIKILREMEQD-GIQPNVVSIC 391
EM LK V S+ +L+ + L DA+K+ M ++ PN VS
Sbjct: 215 ----EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYS 270
Query: 392 TLLAACGRCSQKGKIETVLSAA-QM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
L+ G C + G++E QM +G + +T Y I + + G DKA L+ M
Sbjct: 271 ILIH--GLC-EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 449 RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQI 508
+ K + TYT+LI G C+ K EA +M+ ++ S Y++++ Y K G++
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 509 VEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
V A +M+ C P+V T+ +++ GK
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/541 (21%), Positives = 233/541 (43%), Gaps = 40/541 (7%)
Query: 14 SLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIY 73
S ++ ++DG +++ + + F++K R + F W + Q+ Y + Y
Sbjct: 96 SASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECY 155
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
++ + A +D+ R + E++++
Sbjct: 156 VSLVDVLALAKDVDRIRFVSSEIKKFE--------------------------------- 182
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
P + S N LI + G G +E L V +KM +NG+ P L T+N L++ S
Sbjct: 183 --FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 240
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
A FE+M+ I+PD T N +I K Q KA++ M + E D ++Y ++
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHE--ADKITYMTM 298
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I +C A + M +GI+ +++ ++G G E VF + + G
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK 373
+P++ YT L++ Y +S + A + + KP++V+Y+ +++ NG +++A+
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
DG+ N + +L+ G+ + + E + +G ++ YN+ I ++
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 434 NVGEYDKALGLYKSMRKKKIKADSV-TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
+ D+A+ L+K M +++ +V TYTIL+SG K + EAL + M+ + +
Sbjct: 479 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 538
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
+ ++ G++ A + + G D M++ AG++ E K D
Sbjct: 539 ACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIK-EACKLAD 596
Query: 553 G 553
G
Sbjct: 597 G 597
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 183/386 (47%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+Y +IR +D+ + LF E+ E P A TYN LI + GQ + A I + M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + P+ TY LI+ G KEAL + M + P+ VT+NI+++
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+ A+ ELMK RPD T NI++ L D+A + M + S PDV+SY
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++IH ++ +++++ + V+ N L+ + G +A+ ++ +I +
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
+ +YT++++ + ++ A+G+ ++ ++L+P++ YN L+ + G LD A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
++ EM++D P+VVS ++ + E++L G+ + Y+ I
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADS 457
+L +G D+A+ + M + D+
Sbjct: 609 FLKLGYLDEAISFFDKMVDSGFEPDA 634
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 232/507 (45%), Gaps = 40/507 (7%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+M +L N + A + +M E + + + L+ + + + +A ++ ML+
Sbjct: 77 NLMAKLVRSRNH-ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
+ +N L+ + +A+++ ++M N + PD+ ++N ++ F G + K
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
AL MKG+ T I+I K + D+A+ M+ E D+V YTS+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE--ADLVVYTSL 253
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I + G+++ +A F+ +L G P ++YN L+ + G KEA +F + + G
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK 373
RP++ +YT L++ K ++A + ++ +PN V+YN +I+ +GL+ DA++
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 374 ILREMEQDGIQPNVVSICTLLA---ACGRCSQKGKI-------------ETVLSAAQMRG 417
I+ M++ +P+ ++ LL A G + K+ + + A + G
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 418 I------------------KL---NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
+ KL + V N + S L G+ +KA+ L+K + KI +
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
S TYT +I G CK A + +M +L S Y+ +L + K+G + +A F
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 517 LMKSSGCSPDVVTYTSMLDAYTAAGKM 543
M+ PDVV++ M+D AG +
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 217/497 (43%), Gaps = 6/497 (1%)
Query: 52 HCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYN 109
C ++ R D+ YN +IR +++A L EM+ C T+
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 110 ALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN 169
LI+A +AG+ AM + +M + Y +LI G + ++ +
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
G P +T+N L+ F Q +A FE M +RP+ T +I L + + +A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
+ + N M EK E P+ V+Y II+ G + + +M +P ++YN L+
Sbjct: 337 LQLLNLMIEKDEE--PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 290 GAYAAHGMGKEA-LLVFNEIKQNGFR-PDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
G A G EA L++ +K + + PD++SY +L++ + + +A +++++
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE 407
+ V+ N L+++ G ++ A+++ +++ I N + ++ + +
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
+L ++ ++ + YN + S G D+A L++ M++ D V++ I+I GS
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 468 CKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDV 527
K A S + M L YS ++ + K G + EA S F+ M SG PD
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Query: 528 VTYTSMLDAYTAAGKMN 544
S+L + G+ +
Sbjct: 635 HICDSVLKYCISQGETD 651
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 211/482 (43%), Gaps = 5/482 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N++++ R+ +A L EM+ PD +YN +I + A+ + ++M
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ S T+ LI+A +G EA+ K+M G+ DLV + L+ F +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+ + F+ + P T N +I KL Q +A +IF M E+ P+V +YT
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG--VRPNVYTYTG 322
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G+ + N+M+ + +P+ V+YN ++ G+ +A+ + +K+
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 313 FRPDIVSYTSLLNAY-GRSQKPQKARGVFEMIKRNK-LKPNLVSYNALIDAYGSNGLLDD 370
RPD ++Y LL + + ++ ++ M+K + P+++SYNALI L
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
A+ I + + + V+ LL + + K + I N+ Y + I
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+ G + A GL MR +++ Y L+S CK +A EEM
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKY 550
++ ++ K G I AES M +G SPD+ TY+ +++ + G ++ E + +
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLD-EAISF 621
Query: 551 ED 552
D
Sbjct: 622 FD 623
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 155/325 (47%), Gaps = 2/325 (0%)
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
LV+ R ++ A + M E ++ + VS + ++ Y + +ML G
Sbjct: 82 LVRSRNHELAFSFYRKMLE--TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFA 139
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
++ ++N L+ + +A+ + E+++N PD+ SY +++ + ++ +KA +
Sbjct: 140 FNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
+K + +LV++ LIDA+ G +D+A+ L+EM+ G++ ++V +L+
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
C + + + + RG + YN+ I + +G+ +A +++ M ++ ++ + T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
YT LI G C + K EAL + M+ + Y+ I+ K G + +A LMK
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 520 SSGCSPDVVTYTSMLDAYTAAGKMN 544
PD +TY +L A G ++
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLD 404
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 164/393 (41%), Gaps = 39/393 (9%)
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
NNL+ S N + A + +KM + + V+ + LL + + A LM
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI 263
+ NI++ L + + KA+ + MR ++ PDV SY ++I + ++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR--RNSLMPDVFSYNTVIRGFCEGKEL 193
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
E N M G S+V++ L+ A+ G EA+ E+K G D+V YTSL
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
+ + + + + +F+ + P ++YN LI + G L +A +I M + G+
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 384 QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALG 443
+PNV + Y I VG+ +AL
Sbjct: 314 RPNVYT-----------------------------------YTGLIDGLCGVGKTKEALQ 338
Query: 444 LYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYS 503
L M +K + ++VTY I+I+ CK +A+ +E M + Y+ +L
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 504 KQGQIVEAESTFNLM--KSSGCSPDVVTYTSML 534
+G + EA LM SS PDV++Y +++
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
Query: 59 WMKNQRNYCARN-DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGR 117
W + + RN D Y MI + ++ A+GL +M+ +P YN L+++ +
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 118 AGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVT 177
G A + ++M R P ++N +I+ +G+ K A ++ M+ G+ PDL T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 178 HNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
++ L++ F +A+S+F+ M + PD + V+ + + DK ++ +
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Query: 238 EK 239
+K
Sbjct: 662 DK 663
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 163/315 (51%), Gaps = 2/315 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IYN +I ++ ++ A +F+ M++ + DA TYN LI+ +G+W A ++ DM
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
++ I P+ + LI+ GN EA N+ K+M V P++ T+N L++ F
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A F+LM PD T N +I K ++ + + +F M + D +Y
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV--GDAFTYN 363
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++IH Y +G++ + FN M+ G+ P IV+YN L+ +G ++AL++ +++++
Sbjct: 364 TLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 423
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
DI++Y ++ R+ K ++A +F + R +KP+ ++Y +I GL +A
Sbjct: 424 EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 483
Query: 372 IKILREMEQDGIQPN 386
K+ R M++DG P+
Sbjct: 484 DKLCRRMKEDGFMPS 498
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 197/430 (45%), Gaps = 8/430 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+ ++ + A+ N+ D L+ +M+ D ++ LI+ R + A+ ++ M+
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ PS T +L+N ++EA+++ M G P++V +N +++ +
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
AL F M+ IR D T N +I L ++ A + M ++K + P+V+ +T+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID--PNVIFFTA 259
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + G + + M+ + P++ +YN+L+ + HG +A +F+ + G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PD+V+Y +L+ + +S++ + +F + L + +YN LI Y G L+ A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA---QMRGIKLNTVAYNSAI 429
K+ M G+ P++V+ LL GKIE L Q + ++ + YN I
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDC---LCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
+ +A L++S+ +K +K D++ Y +ISG C+ EA M
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Query: 490 VSKEVYSSIL 499
S+ +Y L
Sbjct: 497 PSERIYDETL 506
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 208/459 (45%), Gaps = 9/459 (1%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
+ D A LF EM + R P + ++ + ++ + + M I ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
LI+ AL + KM G P +VT LL+ F G+++ +A+S + M G
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
P+ N VI+ L K R + A+++F M +K D V+Y ++I S SG+
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR--ADAVTYNTLISGLSNSGRWT 236
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
+ M+ I P+++ + AL+ + G EA ++ E+ + P++ +Y SL+
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
N + A+ +F+++ P++V+YN LI + + ++D +K+ EM G+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 385 PNVVSICTLLAACGRCSQKGKI---ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
+ + TL+ G C Q GK+ + V + G+ + V YN + N G+ +KA
Sbjct: 357 GDAFTYNTLIH--GYC-QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
L + + ++K ++ D +TY I+I G C+ K EA + + Y +++
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML-DAYTA 539
++G EA+ MK G P Y L D YT+
Sbjct: 474 LCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 169/363 (46%), Gaps = 2/363 (0%)
Query: 190 QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
++ A S F M + P V+ + K+ ++D I +++ M E H D+ S
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISH-DLYS 116
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
+T +IH + ++ A M+ G +PSIV+ +L+ + +EA+ + + +
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
GF P++V Y +++N +++ A VF +++ ++ + V+YN LI ++G
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
DA ++LR+M + I PNV+ L+ + + + R + N YNS I
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
+ G A ++ M K D VTY LI+G CK + + + EM + L
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLK 549
Y++++ Y + G++ A+ FN M G SPD+VTY +LD GK+ +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 550 YED 552
ED
Sbjct: 417 VED 419
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 195/421 (46%), Gaps = 8/421 (1%)
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A ++ +ML++ PS + ++ + + + KM + G+ DL + IL+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
F S+ S AL+ M RP TL +++ + ++ +A+ + +SM
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV- 181
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
P+VV Y ++I+ + + N F M +GI+ V+YN L+ + G +A
Sbjct: 182 -PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+ ++ + P+++ +T+L++ + + +AR +++ + R + PN+ +YN+LI+ +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE---TVLSAAQMRGIKL 420
+G L DA + M G P+VV+ TL+ G C K ++E + +G+
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT--GFCKSK-RVEDGMKLFCEMTYQGLVG 357
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM 480
+ YN+ I Y G+ + A ++ M + D VTY IL+ C K +AL +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 481 EEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
E++ ++ V Y+ I+ + ++ EA F + G PD + Y +M+
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 541 G 541
G
Sbjct: 478 G 478
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 235/508 (46%), Gaps = 35/508 (6%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQ-ARGLF 93
F LI + G E F MK + R D+ YN+++R+ R A ++
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKE---FDCRPDVFTYNVILRVMMREEVFFMLAFAVY 186
Query: 94 FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 153
EM + C P+ T+ L++ + G+ A + DDM I P+R TY LI+
Sbjct: 187 NEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQR 246
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
G+ +A + +M +G PD V HN LL F + +A L +
Sbjct: 247 GSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGY 306
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
+ +I L + R+Y +A +++ +M +K PD++ YT +I S +G+IE+ + M
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKN--IKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
++GI P YNA++ A G+ +E + E+ + PD ++T L+ + R+
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
++A +F I+++ P++ ++NALID +G L +A +L +ME +P S+
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG--RP--ASLFLR 480
Query: 394 LAACGRCSQKGKIE--TVLSAAQ------MRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
L+ G S +E ++L A + G + V+YN I + G+ D AL L
Sbjct: 481 LSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM---EEMMHLKLPVSKEVYSSILCAY 502
++ K + DSVTY LI+G ++ + EA ++ H S VY S++
Sbjct: 541 NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH-----SPAVYRSLMTWS 595
Query: 503 SKQGQIVEAESTFNL----MKSSGCSPD 526
++ +++ A FNL +K C D
Sbjct: 596 CRKRKVLVA---FNLWMKYLKKISCLDD 620
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 3/347 (0%)
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
E +K + D+ ++I K+ +KA++ F M+E +C PDV +Y I+ +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKE--FDCRPDVFTYNVILRVM 172
Query: 258 SVSGQIENCE-AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
A +N ML P++ ++ L+ G +A +F+++ G P+
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 317 IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
V+YT L++ + AR +F ++ + P+ V++NAL+D + G + +A ++LR
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 377 EMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
E+DG + +L+ R + + + + + IK + + Y I G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
+ + AL L SM K I D+ Y +I C E S EM + ++
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 497 SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
++C+ + G + EAE F ++ SGCSP V T+ +++D +G++
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 183/424 (43%), Gaps = 48/424 (11%)
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
+++ GV D +L+SA+ KA+ F MK RPD T N+++ +++
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE 175
Query: 224 RQYDK-AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
+ A ++N M K C P++ ++ ++ G+ + + F+ M GI P+
Sbjct: 176 EVFFMLAFAVYNEML--KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
V+Y L+ G +A +F E++ +G PD V++ +LL+ + + + +A + +
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+++ L Y++LID A ++ M + I+P+++ L+ S+
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL---SK 350
Query: 403 KGKIE---TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
GKIE +LS+ +GI +T YN+ I + G ++ L M + + D+ T
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE------- 512
+TILI C+ EA E+ S +++++ K G++ EA
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Query: 513 ----------------STFNLMKSSGC----------------SPDVVTYTSMLDAYTAA 540
+F+ M SG SPD+V+Y +++ + A
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 541 GKMN 544
G ++
Sbjct: 531 GDID 534
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 207/499 (41%), Gaps = 48/499 (9%)
Query: 53 CNLVFQWMKNQRNYCARNDIYN--MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNA 110
C+L +Q ++ ++ D Y ++I +A+ ++A F M+E+ C+PD TYN
Sbjct: 108 CDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNV 167
Query: 111 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 170
++ R + ML A+ YN ++ C S
Sbjct: 168 ILRVMMREEVFF--------MLAFAV------YNEMLK-CNCS----------------- 195
Query: 171 VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
P+L T IL+ + S A F+ M G I P+ T I+I L + D A
Sbjct: 196 --PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDAR 253
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV- 289
+F M + S +PD V++ +++ + G++ + +G + Y++L+
Sbjct: 254 KLFYEM--QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK 349
G + A + L N +K+N +PDI+ YT L+ ++ K + A + + +
Sbjct: 312 GLFRARRYTQAFELYANMLKKN-IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 350 PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETV 409
P+ YNA+I A GLL++ + EM + P+ + L+ + R + E +
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 410 LSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
+ + G + +N+ I GE +A L M + S+ + SG+
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR--PASLFLRLSHSGNRS 488
Query: 470 ---MSKYGEALSFMEEMMHLKLPVSKE---VYSSILCAYSKQGQIVEAESTFNLMKSSGC 523
M + G L ++ H S Y+ ++ + + G I A N+++ G
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 524 SPDVVTYTSMLDAYTAAGK 542
SPD VTY ++++ G+
Sbjct: 549 SPDSVTYNTLINGLHRVGR 567
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 216/484 (44%), Gaps = 36/484 (7%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWR---CKPDAETYNALIN 113
F W+ N + + + + +M+ R ++ AR F ++ K +N+LI
Sbjct: 88 FDWVSN-KGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIR 146
Query: 114 AHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN-GVG 172
++G AG ++ ++ + M + I PS T+N+L++ G A ++ +M GV
Sbjct: 147 SYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT 206
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
PD T N L++ F S +A F+ M+ H PD T N +I L + + A ++
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV-GA 291
+ M +K ++ HP+VVSYT+++ Y + +I+ F+ ML+ G+KP+ V+YN L+ G
Sbjct: 267 LSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 292 YAAHGMGK-EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
AH + + +L+ F PD ++ L+ A+ + A VF+ + KL P
Sbjct: 327 SEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
+ SY+ LI D A + E+ + + LL GK E
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEV---------LL---------GKDECKP 428
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
AA AYN G+ +A +++ + K+ ++ D +Y LI+G C+
Sbjct: 429 LAA----------AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCRE 477
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
K+ A + M+ + E Y ++ K G+ + A T M S P T+
Sbjct: 478 GKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTF 537
Query: 531 TSML 534
S+L
Sbjct: 538 HSVL 541
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 168/377 (44%), Gaps = 18/377 (4%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
F L+ L +RG + +F M+ + +N +I +++ +D+A +F +
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD 234
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA--IPPSRSTYNNLINACGSS 153
M+ + C PD TYN +I+ RAG+ + A N++ ML+ A + P+ +Y L+
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK 294
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG----THIRPD 209
EA+ V M G+ P+ VT+N L+ +Y + L+ G T PD
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI--LIGGNDAFTTFAPD 352
Query: 210 TTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAA 269
T NI+I D A+ +F M K HPD SY+ +I + + + E
Sbjct: 353 ACTFNILIKAHCDAGHLDAAMKVFQEMLNMK--LHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 270 FNMMLAEGI-------KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
FN + + + KP +YN + A+G K+A VF ++ + G + D SY +
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKT 469
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
L+ + R K + A + ++ R + P+L +Y LID G A L+ M +
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Query: 383 IQPNVVSICTLLAACGR 399
P + ++LA +
Sbjct: 530 YLPVATTFHSVLAELAK 546
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 10/251 (3%)
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK---LKPNLVSYN 356
+ L F+ + GF S+ +L GR++ AR I+R +K +N
Sbjct: 83 DGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR 416
+LI +YG+ GL +++K+ + M+Q GI P+V++ +LL+ + + G + +MR
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFD--EMR 200
Query: 417 ---GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
G+ ++ +N+ I + D+A ++K M D VTY +I G C+ K
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 474 GEALSFMEEMMHLKLPVSKEV--YSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYT 531
A + + M+ V V Y++++ Y + +I EA F+ M S G P+ VTY
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 532 SMLDAYTAAGK 542
+++ + A +
Sbjct: 321 TLIKGLSEAHR 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG---IKLNTVAYN 426
D ++ + G S +L GR L + + R +KL +N
Sbjct: 83 DGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN 142
Query: 427 SAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHL 486
S I SY N G + +++ L+++M++ I +T+ L+S K + G A +EM
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR- 201
Query: 487 KLPVSKEVYS--SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
V+ + Y+ +++ + K + EA F M+ C+PDVVTY +++D AGK+
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 216/458 (47%), Gaps = 46/458 (10%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
P++ I++ + + A +I+ D+++ P +N L++ G + + ++
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH------IRPDTTTLNIV 216
KM + + PD+VT IL++ + +AL FE M+G I+ D+ N +
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
I L K+ + +A ++ M+ ++ C P+ V+Y +I Y +G++E + + M +
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEE-RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA---------- 326
IKP++V+ N +VG H A++ F ++++ G + ++V+Y +L++A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 327 -------------------------YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
+ ++ A V E +K +L++YN LI
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 362 YGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLN 421
+ + ++L +ME++G +P+ ++ TL++ G+ +E ++ + G+
Sbjct: 556 FCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT 615
Query: 422 TVAYNSAIGSYLNVGEYDKALGLYKSM-RKKKIKADSVTYTILISGSCKMSKYGEALSFM 480
Y + I +Y +VGE D+AL L+K M K+ ++V Y ILI+ K+ +G+ALS
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 481 EEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
EEM + + E Y+++ +++ Q E+ LM
Sbjct: 676 EEMKMKMVRPNVETYNALFKCLNEKTQ---GETLLKLM 710
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 191/426 (44%), Gaps = 17/426 (3%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N ++ R+ I + L +M E + +PD T LIN ++ + A+ + + M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 133 RA------AIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-DNGVGPDLVTHNILLSAF 185
I +N LI+ G KEA + +M + P+ VT+N L+ +
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
+ A MK I+P+ T+N ++ + + + A+ F M +K
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM--EKEGVKG 474
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
+VV+Y ++IH +E + ML G P Y AL+ +A+ V
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
++K+ GF D+++Y L+ + +K + +++ KP+ ++YN LI +G +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG----IKLN 421
+ +++ +M +DG+ P V + ++ A CS G+++ L + G + N
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDA--YCSV-GELDEALKLFKDMGLHSKVNPN 651
Query: 422 TVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFME 481
TV YN I ++ +G + +AL L + M+ K ++ + TY L + ++ L M+
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 482 EMM-HL 486
EM+ HL
Sbjct: 712 EMVEHL 717
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 220/525 (41%), Gaps = 94/525 (17%)
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR- 133
++IR R ++Q+ L +E + K +++ N +++ R G A ++D+ML+
Sbjct: 157 LLIRWFGRMGMVNQS-VLVYERLDSNMK-NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQK 214
Query: 134 -AAIPPSRSTYNNLINACGSSGNWKEAL-------NVCKKMTDNGVGPDLV--------- 176
+ PP+R T + +++ WKE L + + + +GV P+ V
Sbjct: 215 ESVFPPNRITADIVLHEV-----WKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 177 --------------------------THNILLSAFKSGSQYSKALSYFELMKGTHIRPDT 210
N LLS S+ M IRPD
Sbjct: 270 CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDV 329
Query: 211 TTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF 270
TL I+I+ L K R+ D+A+++F MR K+++ G +
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTD-----------------DGNV------- 365
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEA--LLVFNEIKQNGFRPDIVSYTSLLNAYG 328
IK + +N L+ G KEA LLV ++++ P+ V+Y L++ Y
Sbjct: 366 -------IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV-PNAVTYNCLIDGYC 417
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
R+ K + A+ V +K +++KPN+V+ N ++ + L+ A+ +ME++G++ NVV
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 389 SICTLLAACGRCSQKGKI----ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
+ TL+ AC S K E +L A G + Y + I V A+ +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEA----GCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ +++ D + Y +LI C + + + +M Y++++ + K
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLK 549
E M+ G P V TY +++DAY + G+++ E LK
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD-EALK 637
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 112/260 (43%), Gaps = 3/260 (1%)
Query: 54 NLVFQWMKNQRNYCARNDIYNMMIRLHA--RHNRIDQARGLFFEMQEWRCKPDAETYNAL 111
N+ + + + ++ M +HA + +++A + +M E C PDA+ Y AL
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 112 INAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV 171
I+ + + A+ +++ + YN LI N ++ + M G
Sbjct: 518 ISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
PD +T+N L+S F + E M+ + P TT VI + + D+A+
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+F M S+ +P+ V Y +I+ +S G + M + ++P++ +YNAL
Sbjct: 638 LFKDM-GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696
Query: 292 YAAHGMGKEALLVFNEIKQN 311
G+ L + +E+ ++
Sbjct: 697 LNEKTQGETLLKLMDEMVEH 716
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 212/454 (46%), Gaps = 12/454 (2%)
Query: 91 GLFFEM----QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNL 146
GLF E +E +C PD++ +++N R ++ M+ + P Y L
Sbjct: 146 GLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVL 205
Query: 147 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
C G + + + +MT G+ P++ + I + ++ +A FELMK +
Sbjct: 206 FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGV 265
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
P+ T + +I K +A ++ + +E P+VV + +++ + + ++
Sbjct: 266 LPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL--VAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
+ F M+ G+ P++ YN L+ + G EA+ + +E++ PD+ +YT L+N
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 327 YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
+ +A +F+ +K ++ P+ +YN+LI Y ++ A+ + EM G++PN
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 387 VVSICTLLAACGRCSQKGKIETVLS---AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALG 443
+++ TL+ G C+ + I+ + ++GI + V Y + I ++ +AL
Sbjct: 444 IITFSTLID--GYCNVR-DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 444 LYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYS 503
LY M + I + T+ L+ G K + A+ F +E + + ++ ++
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Query: 504 KQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAY 537
+ G I+ A F+ M+S G +PD+ +Y SML +
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 202/443 (45%), Gaps = 12/443 (2%)
Query: 17 LYDDIDGLLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIY 73
LY + LL+ + N + I +L + +E +F+ MK + Y
Sbjct: 214 LYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK-KHGVLPNLYTY 272
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
+ MI + + + QA GL+ E+ P+ + L++ +A + A ++ M++
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
+ P+ YN LI+ SGN EA+ + +M + PD+ T+ IL++ Q ++
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
A F+ MK I P + T N +IH K ++A+D+ + M E P++++++++
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVE--PNIITFSTL 450
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I Y I+ + M +GI P +V+Y AL+ A+ KEAL +++++ + G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK 373
P+ ++ L++ + + + A ++ + + N V + LI+ NG + A +
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM--RGIKLNTVAYNSAIGS 431
+M GI P++ S ++L G +K +T++ M GI N + N +
Sbjct: 571 FFSDMRSCGITPDICSYVSMLK--GHLQEKRITDTMMLQCDMIKTGILPNLLV-NQLLAR 627
Query: 432 YLNVGEYDK-ALGLYKSMRKKKI 453
+ Y K A L S R K +
Sbjct: 628 FYQANGYVKSACFLTNSSRLKTV 650
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 178/391 (45%), Gaps = 5/391 (1%)
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
G ++EAL V ++M PD +L+ ++ ++LM + PD
Sbjct: 146 GLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIY 202
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
++ C K Y K + + M + P+V YT I ++E E F +M
Sbjct: 203 FVLFQCCFKQGLYSKKEKLLDEMTSLGIK--PNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
G+ P++ +Y+A++ Y G ++A ++ EI P++V + +L++ + ++++
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
AR +F + + + PNL YN LI + +G + +A+ +L EME + P+V + L
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ Q + + + I ++ YNS I Y ++AL L M +
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ + +T++ LI G C + A+ EM + Y++++ A+ K+ + EA
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
++ M +G P+ T+ ++D + G+++
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 184/416 (44%), Gaps = 8/416 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IY ++ + + + L EM KP+ Y I R + A + + M
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + P+ TY+ +I+ +GN ++A + K++ + P++V L+ F +
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A S F M + P+ N +IH K +A+ + + M + PDV +YT
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM--ESLNLSPDVFTYT 378
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+I+ + Q+ F M E I PS +YN+L+ Y ++AL + +E+ +
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G P+I+++++L++ Y + + A G++ + + P++V+Y ALIDA+ + +A
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK---LNTVAYNSA 428
+++ +M + GI PN + L+ + +G++ + Q + N V +
Sbjct: 499 LRLYSDMLEAGIHPNDHTFACLVDGFWK---EGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
I G +A + MR I D +Y ++ G + + + + +M+
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 20/329 (6%)
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREK-KSECHPDVVSYTSIIHLYSVSGQIENCE 267
D + + VIH L +Y A + S+ E+ K P +S+ L++ I++
Sbjct: 74 DLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSH----RLFNALEDIQS-- 127
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
K SI ++ L+ + G+ +EAL V E+K + PD + S+LN
Sbjct: 128 ----------PKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGL 174
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
R ++ ++++ L P++ Y L GL K+L EM GI+PNV
Sbjct: 175 VRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNV 234
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
+ R ++ + E + + G+ N Y++ I Y G +A GLYK
Sbjct: 235 YIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKE 294
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
+ ++ + V + L+ G CK + A S M+ + + VY+ ++ + K G
Sbjct: 295 ILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
++EA + M+S SPDV TYT +++
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILING 383
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/524 (23%), Positives = 217/524 (41%), Gaps = 62/524 (11%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
+ N+++R H R+ A ++++R +P TYN LI A +A + A I +
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
M A + T + G W+EAL + + T+N V PD V + L+S S
Sbjct: 261 MSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE--TENFV-PDTVFYTKLISGLCEASL 317
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+ +A+ + M+ T P+ T + ++ + +Q + + N M + C+P +
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG--CYPSPKIF 375
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG-------------------A 291
S++H Y SG M+ G P V YN L+G A
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 292 YA----------------------AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
Y+ + G ++A V E+ GF PD +Y+ +LN
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 330 SQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
+ K + A +FE +KR L ++ +Y ++D++ GL++ A K EM + G PNVV+
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 390 ICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR 449
L+ A + + + G N V Y++ I + G+ +KA +++ M
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 450 KKKIKAD----------------SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
K D VTY L+ G CK + EA ++ M ++
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675
Query: 494 VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAY 537
VY +++ K G++ EA+ M G + TY+S++D Y
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 196/456 (42%), Gaps = 53/456 (11%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
PD TY+ ++N A + A + ++M R + TY ++++ +G ++A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
+M + G P++VT+ L+ A+ + S A FE M P+ T + +I K
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 223 LRQYDKAIDIFNSM---------------REKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
Q +KA IF M + SE P+VV+Y +++ + S ++E
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE-RPNVVTYGALLDGFCKSHRVEEAR 659
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
+ M EG +P+ + Y+AL+ G EA V E+ ++GF + +Y+SL++ Y
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
+ ++ A V + N PN+V Y +ID G D+A K+++ ME+ G QPNV
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
V+ Y + I + +G+ + L L +
Sbjct: 780 VT-----------------------------------YTAMIDGFGMIGKIETCLELLER 804
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
M K + + VTY +LI CK A + +EEM P Y ++ ++K +
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--E 862
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+E+ + + +P + Y ++D A ++
Sbjct: 863 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 214/496 (43%), Gaps = 54/496 (10%)
Query: 44 LTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKP 103
L +E L+F+ MK + A Y +M+ + I+QAR F EM+E C P
Sbjct: 493 LCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 104 DAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 163
+ TY ALI+A+ +A + +A + + ML P+ TY+ LI+ +G ++A +
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 164 KKMT----------------DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
++M DN P++VT+ LL F + +A + M
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
P+ + +I L K+ + D+A ++ M E + +Y+S+I Y + +
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP--ATLYTYSSLIDRYFKVKRQDLAS 729
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
+ ML P++V Y ++ G EA + +++ G +P++V+YT++++ +
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ------- 380
G K + + E + + PN V+Y LID NG LD A +L EM+Q
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 381 -------DGIQPNVVSICTLLAACGRCSQ-------KGKIETVLSAAQMR-GIKL----- 420
+G + LL G+ + I+ ++ A ++ ++L
Sbjct: 850 AGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 421 --------NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
+ YNS I S + + A L+ M KK + + ++ LI G + SK
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969
Query: 473 YGEALSFMEEMMHLKL 488
EAL ++ + H+++
Sbjct: 970 ISEALLLLDFISHMEI 985
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 168/373 (45%), Gaps = 11/373 (2%)
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
N+L+ +S AL +K RP +T N +I +K + D A I M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM-- 261
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
S + + +T YS+ ++ A ++ E P V Y L+ +
Sbjct: 262 --SLANLRMDGFTLRCFAYSLC-KVGKWREALTLVETENFVPDTVFYTKLISGLCEASLF 318
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
+EA+ N ++ P++V+Y++LL ++ + + V M+ P+ +N+L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA-CG-----RCSQKGKIETVLSA 412
+ AY ++G A K+L++M + G P V L+ + CG C E S
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
G+ LN + +S + G+Y+KA + + M + D+ TY+ +++ C SK
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
A EEM L Y+ ++ ++ K G I +A FN M+ GC+P+VVTYT+
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 533 MLDAYTAAGKMNF 545
++ AY A K+++
Sbjct: 559 LIHAYLKAKKVSY 571
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 195/457 (42%), Gaps = 29/457 (6%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINAC----GSSGNWK 157
K A YNAL++ R + + ++ L+ + + +N +G++
Sbjct: 162 KHTAPVYNALVDLIVRDDDEK----VPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
AL ++ D P T+N L+ AF + A M ++R D TL
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
+ L K+ ++ +A+ + + PD V YT +I + E N M A
Sbjct: 278 YSLCKVGKWREALTLVET-----ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 278 IKPSIVSYNALV-GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
P++V+Y+ L+ G +G+ V N + G P + SL++AY S A
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGR-CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 391
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSN------GLLDDAIKILREMEQDGIQPNVVSI 390
+ + + + P V YN LI + + LLD A K EM G+ N +++
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451
Query: 391 CTLLAACGRC-SQKGKIETVLSAAQM---RGIKLNTVAYNSAIGSYLNVGEYDKALGLYK 446
+ RC GK E S + +G +T Y+ + N + + A L++
Sbjct: 452 SSF----TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQG 506
M++ + AD TYTI++ CK +A + EM + + Y++++ AY K
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 507 QIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
++ A F M S GC P++VTY++++D + AG++
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 115/281 (40%), Gaps = 9/281 (3%)
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+PS +YN L+ A+ A L+ E+ R D +T AY K K R
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD--GFTLRCFAYSLC-KVGKWR 287
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+++ P+ V Y LI L ++A+ L M PNVV+ TLL C
Sbjct: 288 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
Q G+ + VL+ M G + +NS + +Y G++ A L K M K
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 458 VTYTILISGSC--KMSKYGEALSFME----EMMHLKLPVSKEVYSSILCAYSKQGQIVEA 511
V Y ILI C K S + L E EM+ + ++K SS G+ +A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 512 ESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
S M G PD TY+ +L+ A KM L +E+
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 211/438 (48%), Gaps = 3/438 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+++ ++ +A+ I+ + +F +++ KP + L+N+ + I M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
++ + + YN L++AC SG+ ++A + +M + GV PD+ T+N L+S + S +
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+ALS + M+ + + P+ T N IH + + +A +F RE K + + V+YT
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF---REIKDDVTANHVTYT 311
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++I Y I+ +M + G P +V+YN+++ G +EA + E+
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
PD ++ +L+NAY + + A V + + + LK ++ SY ALI + L++A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+ L M + G P + L+ +++ +I +L + RG+ + Y I
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
+ + D A L++SM KK + DSV +T + + K EA + + M + +L V+
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551
Query: 492 KEVYSSILCAYSKQGQIV 509
++Y SI +Y+ ++
Sbjct: 552 LKLYKSISASYAGDNDVL 569
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 180/409 (44%), Gaps = 40/409 (9%)
Query: 173 PDLVTH--NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
P+ V+H + L+ + + ++ FE ++ ++P ++++ LVK R D
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
IF M K ++ Y ++H S SG E E + M +G+ P I +YN L+
Sbjct: 189 KIFKKM--VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
Y M EAL V + ++++G P+IV+Y S ++ + R + ++A +F IK + +
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTA 305
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV---SICTLLAACGRCSQKG--- 404
N V+Y LID Y +D+A+++ ME G P VV SI L GR +
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 405 -----------------------KIETVLSAAQMR------GIKLNTVAYNSAIGSYLNV 435
KIE ++SA +++ G+KL+ +Y + I + V
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
E + A SM +K TY+ L+ G +K E +EE L +Y
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485
Query: 496 SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
++ K Q+ A+ F M+ G D V +T+M AY GK+
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVT 534
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 193/436 (44%), Gaps = 5/436 (1%)
Query: 105 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCK 164
+ ++ L+ + +AG ++ + + + + P L+N+ + K
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 165 KMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
KM GV ++ +N+L+ A KA M+ + PD T N +I K
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS 284
+ +A+ + + M ++S P++V+Y S IH +S G++ F + + + + V+
Sbjct: 253 MHFEALSVQDRM--ERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVT 309
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
Y L+ Y EAL + ++ GF P +V+Y S+L + ++A + +
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA-CGRCSQK 403
K++P+ ++ N LI+AY + A+K+ ++M + G++ ++ S L+ C +
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 404 GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
E + S + +G Y+ + + N + D+ L + K+ + AD Y L
Sbjct: 430 NAKEELFSMIE-KGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGC 523
I CK+ + A E M L +++++ AY + G++ EA + F++M +
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRL 548
Query: 524 SPDVVTYTSMLDAYTA 539
++ Y S+ +Y
Sbjct: 549 MVNLKLYKSISASYAG 564
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 131/330 (39%), Gaps = 40/330 (12%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
I ++ G + +F+ +K+ + A + Y +I + R N ID+A L M+
Sbjct: 279 FIHGFSREGRMREATRLFREIKD--DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESR 336
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P TYN+++ G+ R A ++ +M I P T N LINA + A
Sbjct: 337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ V KKM ++G+ D+ ++ L+ F + A M P T + ++
Sbjct: 397 VKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDG 456
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
+ D+ + EK+ C DV Y +I Q++ + F M +G
Sbjct: 457 FYNQNKQDEITKLLEEF-EKRGLC-ADVALYRGLIRRICKLEQVDYAKVLFESMEKKG-- 512
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
LVG D V +T++ AY R+ K +A +
Sbjct: 513 --------LVG-------------------------DSVIFTTMAYAYWRTGKVTEASAL 539
Query: 340 FEMIKRNKLKPNLVSYNALIDAY-GSNGLL 368
F+++ +L NL Y ++ +Y G N +L
Sbjct: 540 FDVMYNRRLMVNLKLYKSISASYAGDNDVL 569
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/564 (23%), Positives = 237/564 (42%), Gaps = 79/564 (14%)
Query: 8 VAEQVLSLTLY--DD--IDGLLNR-----------WV--GRFARKNFPFLIKELTQRG-- 48
VAE+ + L ++ DD IDG ++ WV + + F +++ ++G
Sbjct: 141 VAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFL 200
Query: 49 -SIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHA----------------RHNRIDQARG 91
S+ +CN+V + +++ R + +Y MI H + +++
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIE-HGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 92 LFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACG 151
++ EM+ + TYN LIN + G+ A DM R+ + ++N LI
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 152 SSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTT 211
G + +A V +M + G+ P T+NI + A + A M PD
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVV 375
Query: 212 TLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN 271
+ N ++H +K+ ++ +A +F+ +R + HP +V+Y ++I SG +E +
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLR--AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 272 MMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQ 331
M + I P +++Y LV + +G A V++E+ + G +PD +YT+ R
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG 493
Query: 332 KPQKA-RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
KA R EM+ + P+L YN ID G L AI+ R++ + G+ P+
Sbjct: 494 DSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD---- 549
Query: 391 CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
V Y + I YL G++ A LY M +
Sbjct: 550 -------------------------------HVTYTTVIRGYLENGQFKMARNLYDEMLR 578
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
K++ +TY +LI G K + +A + EM + + ++++L K G I E
Sbjct: 579 KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 511 AESTFNLMKSSGCSPDVVTYTSML 534
A M+ G P+ +YT ++
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLI 662
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 211/473 (44%), Gaps = 44/473 (9%)
Query: 48 GSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAET 107
G +E + ++ MK +RN YN++I +++ ++++AR +M+ +
Sbjct: 252 GDLERVDKIWLEMK-RRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
+N LI + + G + A + D+ML A I P+ STYN I A G +A + M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 168 DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 227
PD+V++N L+ + ++ +A F+ ++ I P T N +I L + +
Sbjct: 371 ----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS------ 281
A + M + PDV++YT+++ + +G + ++ ML +GIKP
Sbjct: 427 GAQRLKEEMTTQL--IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 282 ------------------------------IVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+ YN + G +A+ +I +
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G PD V+YT+++ Y + + + AR +++ + R +L P++++Y LI + G L+ A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+ EM++ G++PNV++ LL + + L + GI N +Y I
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
+ ++++ + LYK M K+I+ D T+ L K + E + F+E ++
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESRE-VEFLERLL 716
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 177/418 (42%), Gaps = 44/418 (10%)
Query: 128 MDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL-SAFK 186
+ M+R PS N ++ S +A V + M ++G+ P ++T N +L S FK
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+G + E MK +I T NI+I+ K + ++A MR P
Sbjct: 251 AGDLERVDKIWLE-MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP- 308
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
S+ +I Y G ++ + ML GI P+ +YN + A G +A
Sbjct: 309 -YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----R 363
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
E+ + PD+VSY +L++ Y + K +A +F+ ++ + P++V+YN LID +G
Sbjct: 364 ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYN 426
L+ A ++ EM I P+V++ TL+ + V +GIK + AY
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 427 SAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT-YTILISGSCKMSKYGEALSFMEEMMH 485
+ L +G+ DKA L++ M A +T Y + I G CK+ +A+ F ++
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 486 LKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ G PD VTYT+++ Y G+
Sbjct: 544 V-----------------------------------GLVPDHVTYTTVIRGYLENGQF 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 140/303 (46%), Gaps = 16/303 (5%)
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
+Y+ E +F M+ +G PS+ + N ++ M +A V+ + ++G P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
++++ ++L++ ++ ++ ++ +KR ++ + V+YN LI+ + NG +++A +
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQK------GKIETVLSAAQMRGIKLNTVAYNSAI 429
+M + G S L+ G C Q G + +L+A GI T YN I
Sbjct: 297 GDMRRSGFAVTPYSFNPLIE--GYCKQGLFDDAWGVTDEMLNA----GIYPTTSTYNIYI 350
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
+ + G D A L SM D V+Y L+ G KM K+ EA +++ +
Sbjct: 351 CALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLK 549
S Y++++ + G + A+ M + PDV+TYT+++ + G ++
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 550 YED 552
Y++
Sbjct: 467 YDE 469
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 215/487 (44%), Gaps = 12/487 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+ +I + +D+A LF M++ +PD Y+ LI+ + +AG + L
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ +++ I+ SG+ A V K+M G+ P++VT+ IL+ +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A + + + P T + +I K ++ M K PDVV Y
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM--IKMGYPPDVVIYGV 466
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++ S G + + ML + I+ ++V +N+L+ + EAL VF + G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 313 FRPDIVSYTSLL------NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
+PD+ ++T+++ +A+ + KP +F++++RNK+ ++ N +I
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK--GKIETVLSAAQMRGIKLNTVA 424
++DA K + + ++P++V+ T++ CG CS + + E + ++ NTV
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMI--CGYCSLRRLDEAERIFELLKVTPFGPNTVT 644
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
I + D A+ ++ M +K K ++VTY L+ K + EEM
Sbjct: 645 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ S YS I+ K+G++ EA + F+ + PDVV Y ++ Y G++
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 764
Query: 545 FEPLKYE 551
L YE
Sbjct: 765 EAALLYE 771
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 186/395 (47%), Gaps = 14/395 (3%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++I+ + RI +A G++ ++ + +P TY++LI+ + G R + +DM+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ PP Y L++ G A+ KM + ++V N L+ + +++
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK------AIDIFNSMREKKSECHPD 246
+AL F LM I+PD T V+ + + K + +F+ M+ K D
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK--ISAD 571
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
+ +IHL +IE+ FN ++ ++P IV+YN ++ Y + EA +F
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
+K F P+ V+ T L++ ++ A +F ++ KPN V+Y L+D + +
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 691
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE---TVLSAAQMRGIKLNTV 423
++ + K+ EM++ GI P++VS ++ G C ++G+++ + A + + V
Sbjct: 692 DIEGSFKLFEEMQEKGISPSIVSYSIIID--GLC-KRGRVDEATNIFHQAIDAKLLPDVV 748
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
AY I Y VG +A LY+ M + +K D +
Sbjct: 749 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 8/293 (2%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALI------NAHGRAGQWRWAM 125
++N +I R NR D+A +F M + KPD T+ ++ +A + + +
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
+ D M R I + N +I+ ++A + + + PD+VT+N ++ +
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
S + +A FEL+K T P+T TL I+IH L K D AI +F+ M EK S+ P
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK--P 675
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
+ V+Y ++ +S S IE F M +GI PSIVSY+ ++ G EA +F
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
++ PD+V+Y L+ Y + + +A ++E + RN +KP+ + AL
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 183/432 (42%), Gaps = 45/432 (10%)
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
Q A ++ +L P+ T+ LIN G A ++ K M G+ PDL+ ++
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 180 ILLSA-FKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
L+ FK+G M G + + L H VKL
Sbjct: 326 TLIDGYFKAG------------MLGMGHKLFSQAL----HKGVKL--------------- 354
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
DVV ++S I +Y SG + + ML +GI P++V+Y L+ G
Sbjct: 355 -------DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
EA ++ +I + G P IV+Y+SL++ + + + ++E + + P++V Y L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
+D GL+ A++ +M I+ NVV +L+ R ++ + V + GI
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 419 KLNTVAYNSAIGSYLNVGEYDK------ALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
K + + + + + + K L L+ M++ KI AD ++I K +
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
+A F ++ K+ Y++++C Y ++ EAE F L+K + P+ VT T
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 533 MLDAYTAAGKMN 544
++ M+
Sbjct: 648 LIHVLCKNNDMD 659
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 155/336 (46%), Gaps = 4/336 (1%)
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
D ++ C + DKA++IF + D V Y + L S +++
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSV-YRMLNSLIG-SDRVDLIAD 202
Query: 269 AFNMMLAEGIKPSIVSYNALV-GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
F+ + GI+PS VS + V A G +AL + + GFR IVS +L
Sbjct: 203 HFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL 262
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
Q +R + ++ PN+V++ LI+ + G +D A + + MEQ GI+P++
Sbjct: 263 SVDQIEVASR-LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
++ TL+ + G + S A +G+KL+ V ++S I Y+ G+ A +YK
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
M + I + VTYTILI G C+ + EA +++ + S YSS++ + K G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ + + M G PDVV Y ++D + G M
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 133/289 (46%), Gaps = 2/289 (0%)
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G++ +++ G + IVS N ++ + + + A + + + G P++V++
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQI-EVASRLLSLVLDCGPAPNVVTF 289
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
+L+N + + + +A +F+++++ ++P+L++Y+ LID Y G+L K+ +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
G++ +VV + + + V +GI N V Y I G +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A G+Y + K+ ++ VTY+ LI G CK + E+M+ + P +Y ++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLK 549
SKQG ++ A M +VV + S++D + + + E LK
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD-EALK 517
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 211/475 (44%), Gaps = 49/475 (10%)
Query: 44 LTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHA--RHNRIDQARGLFFEMQEWRC 101
LT ++ V + + Y +D+Y+ I +H R +R+ A + +M +
Sbjct: 78 LTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY 137
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
+P T+ +L++ + A +++ M+++ P+ YN LI+ +G AL
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+ +M G+G D+VT+N LL+ ++S A M I PD T +I V
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K D+A +++ M + S P+ V+Y SII+ + G++ + + F++M ++G P+
Sbjct: 258 KQGNLDEAQELYKEMIQ--SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+V+YN L+ + M E + +F + GF DI +Y +L++ Y + K + A +F
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ ++ P+++++ L+ NG ++ A+ +M + S
Sbjct: 376 WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE--------------------S 415
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+K + VAYN I + +KA L+ + + +K D+ TYT
Sbjct: 416 EK---------------YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
I+I G CK EA + M KE I+C + + +E S+ N
Sbjct: 461 IMILGLCKNGPRREADELIRRM--------KE--EGIICQMNAEDDHLEEHSSSN 505
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 188/392 (47%), Gaps = 10/392 (2%)
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+++A + +M + P +V LL+A + +Y + + + M+ I D + I
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
+IHC + + A+ + M + E P +V++ S++H + + +I + + +M+
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYE--PSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK-PQ 334
G +P++V YN L+ +G AL + NE+++ G D+V+Y +LL S +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV---SIC 391
AR + +M+KR+ + P++V++ ALID + G LD+A ++ +EM Q + PN V SI
Sbjct: 230 AARMLRDMMKRS-INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
L GR K ++++ +G N V YN+ I + D+ + L++ M +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMAS---KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 452 KIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEA 511
AD TY LI G C++ K AL M+ ++ + +L G+I A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 512 ESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
F+ M+ S +V Y M+ A K+
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 187/450 (41%), Gaps = 37/450 (8%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
R + A LFFEM + P + L+ A ++ + M I ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
LI+ AL+V KM G P +VT LL F ++ A S LM +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
P+ N +I L K + + A+++ N M +K DVV+Y +++ SG+
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG--LGADVVTYNTLLTGLCYSGRWS 228
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
+ M+ I P +V++ AL+ + G EA ++ E+ Q+ P+ V+Y S++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
N + A+ F+++ PN+V+YN LI + ++D+ +K+ + M +G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
++ + YN+ I Y VG+ AL +
Sbjct: 349 ADIFT-----------------------------------YNTLIHGYCQVGKLRVALDI 373
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ M +++ D +T+ IL+ G C + AL ++M + + Y+ ++ K
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
++ +A F + G PD TYT M+
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 37/313 (11%)
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS 284
+++ A +F M S+ P +V +T ++ + + E M GI + S
Sbjct: 51 RFEDAFALFFEMVH--SQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
+ L+ + AL V ++ + G+ P IV++ SLL+ + + A + ++
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
++ +PN+V YN LID NG L+ A+++L EME+ G+ +VV+
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT--------------- 213
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
YN+ + G + A + + M K+ I D VT+T LI
Sbjct: 214 --------------------YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
K EA +EM+ + + Y+SI+ G++ +A+ TF+LM S GC
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 525 PDVVTYTSMLDAY 537
P+VVTY +++ +
Sbjct: 314 PNVVTYNTLISGF 326
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 35/246 (14%)
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
++A +F E+ + P IV +T LL A ++ + + ++ + +L S+ L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
I + L A+ +L +M + G +P++V+ +LL ++ G +++ G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
+ N V YN+ I GE + AL L M KK + AD VTY L++G C ++ +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
+ +MM + +PDVVT+T+++D +
Sbjct: 233 MLRDMMKRSI-----------------------------------NPDVVTFTALIDVFV 257
Query: 539 AAGKMN 544
G ++
Sbjct: 258 KQGNLD 263
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQE 98
+I L G + F M ++ C N + YN +I + +D+ LF M
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKG--CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE 158
D TYN LI+ + + G+ R A++I M+ + P T+ L++ +G +
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
AL M ++ +V +NI++ + KA F + ++PD T I+I
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECH 244
L K +A ++ M+E+ C
Sbjct: 465 GLCKNGPRREADELIRRMKEEGIICQ 490
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 180/363 (49%), Gaps = 7/363 (1%)
Query: 109 NALINAHGRAGQWRWAMNI-MDDMLRAAI--PPSRSTYNNLINACGSSGNWKEALNVCKK 165
L + H R RW I + ++LR + P+ Y LI G ++A + ++
Sbjct: 116 TVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQE 175
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH-IRPDTTTLNIVIHCLVKLR 224
M + G + + L+SA+ ++ A + E MK +H +PD T +I+I +++
Sbjct: 176 MINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVF 235
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG-IKPSIV 283
+DK D+ + MR + P+ ++Y ++I Y + E+ ML E KP
Sbjct: 236 AFDKVQDLLSDMR--RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSW 293
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMI 343
+ N+ + A+ +G + + + + +G P+I ++ LL++YG+S +K V E +
Sbjct: 294 TMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM 353
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
++ +V+YN +IDA+G G L + R M+ + I P+ V++C+L+ A GR S+
Sbjct: 354 QKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKA 413
Query: 404 GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
KI VL + I+L+ V +N + +Y + ++ + G+ + M KK K D +TY +
Sbjct: 414 DKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTM 473
Query: 464 ISG 466
+
Sbjct: 474 VKA 476
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 157/320 (49%), Gaps = 7/320 (2%)
Query: 51 EHCNLVFQWMKNQRNYCARN-DIYNMMIRLHARHNRIDQARGLFFEMQE-WRCKPDAETY 108
E + +FQ M N+ C N ++Y ++ ++R R D A L M+ C+PD TY
Sbjct: 167 EKAHELFQEMINEG--CVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTY 224
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT- 167
+ LI + + + +++ DM R I P+ TYN LI+A G + + E + +M
Sbjct: 225 SILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLG 284
Query: 168 DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 227
++ PD T N L AF Q + +E + + I P+ T NI++ K Y
Sbjct: 285 EDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYK 344
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
K + M +K +V+Y +I + +G ++ E F +M +E I PS V+ +
Sbjct: 345 KMSAVMEYM--QKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCS 402
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
LV AY + V I+ + R D+V + L++AYGR +K + +GV E++++
Sbjct: 403 LVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKG 462
Query: 348 LKPNLVSYNALIDAYGSNGL 367
KP+ ++Y ++ AY +G+
Sbjct: 463 FKPDKITYRTMVKAYRISGM 482
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 172/362 (47%), Gaps = 10/362 (2%)
Query: 79 LHARHNRIDQARG----LFFEM---QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
L + H RI R FE+ Q W KP+ Y LI G+ Q A + +M
Sbjct: 118 LESLHERITALRWESAIQVFELLREQLW-YKPNVGIYVKLIVMLGKCKQPEKAHELFQEM 176
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM-TDNGVGPDLVTHNILLSAFKSGSQ 190
+ + Y L++A SG + A + ++M + + PD+ T++IL+ +F
Sbjct: 177 INEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFA 236
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+ K M+ IRP+T T N +I K + + + M + +C PD +
Sbjct: 237 FDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQML-GEDDCKPDSWTM 295
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
S + + +GQIE E + + GI+P+I ++N L+ +Y G K+ V +++
Sbjct: 296 NSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQK 355
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
+ IV+Y +++A+GR+ ++ +F +++ ++ P+ V+ +L+ AYG D
Sbjct: 356 YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
+LR +E I+ ++V L+ A GR + +++ VL + +G K + + Y + +
Sbjct: 416 IGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVK 475
Query: 431 SY 432
+Y
Sbjct: 476 AY 477
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 177/361 (49%), Gaps = 17/361 (4%)
Query: 190 QYSKALSYFELMKGTH-IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
++ A+ FEL++ +P+ +I L K +Q +KA ++F M + + +V
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEV- 187
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMM----LAEGIKPSIVSYNALVGAYAAHGMGKEALLV 304
YT+++ YS SG+ + AAF ++ + +P + +Y+ L+ ++ + +
Sbjct: 188 -YTALVSAYSRSGRFD---AAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDL 243
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQK-PQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+++++ G RP+ ++Y +L++AYG+++ + + +M+ + KP+ + N+ + A+G
Sbjct: 244 LSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFG 303
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
NG ++ + + GI+PN+ + LL + G+ K+ V+ Q V
Sbjct: 304 GNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIV 363
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG---SCKMSKYGEALSFM 480
YN I ++ G+ + L++ M+ ++I VT L+ + K K G L F+
Sbjct: 364 TYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFI 423
Query: 481 EEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
E + + + ++ ++ AY + + E + LM+ G PD +TY +M+ AY +
Sbjct: 424 E---NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRIS 480
Query: 541 G 541
G
Sbjct: 481 G 481
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 369 DDAIKILREM-EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNS 427
+ AI++ + EQ +PNV L+ G+C Q K + G +N Y +
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 428 AIGSYLNVGEYDKALGLYKSMRKK-KIKADSVTYTILISGSCKMSKYGEALSFMEEMMHL 486
+ +Y G +D A L + M+ + D TY+ILI ++ + + + +M
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 487 KLPVSKEVYSSILCAYSKQGQIVEAESTF-NLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ + Y++++ AY K VE EST ++ C PD T S L A+ G++
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 118/307 (38%), Gaps = 90/307 (29%)
Query: 301 ALLVFNEIKQN-GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
A+ VF +++ ++P++ Y L+ G+ ++P+KA +F+ + N Y AL+
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 360 DAYGSNGLLDDAIKILREMEQD-GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
AY +G D A +L M+ QP+V +
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHT----------------------------- 223
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
Y+ I S+L V +DK L MR++ I+ +++TY LI YG+A
Sbjct: 224 ------YSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA------YGKAKM 271
Query: 479 FMEEMMHLKLPVSKE-------VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDV---- 527
F+E L + ++ +S L A+ GQI E+ + +SSG P++
Sbjct: 272 FVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFN 331
Query: 528 -------------------------------VTYTSMLDAYTAAGKMN-----FEPLKYE 551
VTY ++DA+ AG + F ++ E
Sbjct: 332 ILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSE 391
Query: 552 DGFWKCM 558
F C+
Sbjct: 392 RIFPSCV 398
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 206/452 (45%), Gaps = 44/452 (9%)
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 134
+MI L + NR ++ EM + +P+ T+N +INA + G+ A ++M+DM
Sbjct: 194 LMIAL-LKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 135 AIPPSRSTYNNLINA-CGSSGNWK--EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
P+ +YN LI+ C GN K +A V K+M +N V P+L T NIL+ F
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
++ F+ M ++P+ + N +I+ L + +AI SMR+K
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI----SMRDK------------ 356
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
M++ G++P++++YNAL+ + + M KEAL +F +K
Sbjct: 357 ---------------------MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G P Y L++AY + K + E ++R + P++ +YN LI NG ++ A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
K+ ++ G+ P++V+ L+ R + K +L G+K + YN +
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 432 YLNVGEYDKALGLYKSMRK-KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
Y G A + M K ++++ + +Y +L+ G + K +A + EM+ L
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Query: 491 SKEVYSSILCAYSKQGQIVEAES-TFNLMKSS 521
++ Y + QG + + E FN+ S
Sbjct: 575 NRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 178/358 (49%), Gaps = 10/358 (2%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHAR---HNRIDQARGL 92
F +I L + G + V + MK C+ N + YN +I + + + ++ +A +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYG--CSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 93 FFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGS 152
EM E P+ T+N LI+ + +M + +ML + P+ +YN+LIN +
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 153 SGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTT 212
G EA+++ KM GV P+L+T+N L++ F +AL F +KG P T
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
N++I KL + D + M ++ PDV +Y +I +G IE + F+
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEM--EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
+ ++G+ P +V+++ L+ Y G ++A ++ E+ + G +P ++Y ++ Y +
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520
Query: 333 PQKARGV-FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
+ A + +M K +L+ N+ SYN L+ Y G L+DA +L EM + G+ PN ++
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 183/376 (48%), Gaps = 13/376 (3%)
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
V K+M + P++ T N++++A + +KA E MK P+ + N +I
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 222 KL----RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
KL + Y KA + M E ++ P++ ++ +I + + F ML +
Sbjct: 270 KLGGNGKMY-KADAVLKEMVE--NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD 326
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+KP+++SYN+L+ G EA+ + +++ G +P++++Y +L+N + ++ ++A
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+F +K P YN LIDAY G +DD + EME++GI P+V + L+A
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
R + + +G+ + V ++ + Y GE KA L K M K +K
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505
Query: 458 VTYTILISGSCKMSKYGEALSF---MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
+TY I++ G CK A + ME+ L++ V+ Y+ +L YS++G++ +A
Sbjct: 506 LTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS--YNVLLQGYSQKGKLEDANML 563
Query: 515 FNLMKSSGCSPDVVTY 530
N M G P+ +TY
Sbjct: 564 LNEMLEKGLVPNRITY 579
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G K S +S L+ A + V+ E+ + +P++ ++ ++NA ++ K KA
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAY---GSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
R V E +K PN+VSYN LID Y G NG + A +L+EM ++ + PN+ + L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ + V + +K N ++YNS I N G+ +A+ + M +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ + +TY LI+G CK EAL + + +Y+ ++ AY K G+I + +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
M+ G PDV TY ++ G +
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 100/227 (44%), Gaps = 4/227 (1%)
Query: 322 SLLNAYGRSQKPQKARGVFEMIKR-NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
S L+ + R+ + +F I + + N + + L+ AY +N + + +
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
G + + +S L+ A + ++ +E V R I+ N +N I + G+ +K
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE---ALSFMEEMMHLKLPVSKEVYSS 497
A + + M+ + V+Y LI G CK+ G+ A + ++EM+ + + ++
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
++ + K + + F M P+V++Y S+++ GK++
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 186/441 (42%), Gaps = 2/441 (0%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
KP YNA+I+A ++ A M P R TYN LI+ G EA+
Sbjct: 177 KPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIR 236
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+ K+M G P++ T+ IL+ F + +AL E+M+ + P+ T+ +H +
Sbjct: 237 LVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIF 296
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
+ KA ++ EK S V Y ++++ S + + + G P
Sbjct: 297 RCLPPCKAFEVLVGFMEKDSNLQR--VGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
++NA + E +F+ G +P Y L+ A +Q+ + +
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ + L ++ SYNA+ID +++A L EM+ GI PN+V+ T L+
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
K+ VL + G K + + ++ I E A +K M + I+ + +TY
Sbjct: 475 DVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYN 534
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
ILI C ++ +M L Y++ + ++ K ++ +AE M
Sbjct: 535 ILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRI 594
Query: 522 GCSPDVVTYTSMLDAYTAAGK 542
G PD TY++++ A + +G+
Sbjct: 595 GLKPDNFTYSTLIKALSESGR 615
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 219/532 (41%), Gaps = 79/532 (14%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI + G ++CN VF + + +YN +I + N +D A F +M+
Sbjct: 151 LIGSWGRLGLAKYCNDVFAQI-SFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
CKPD TYN LI+ + G A+ ++ M + P+ TY LI+ +G EA
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 160 LNVCKKMTDNGVGPDLVT-----HNI-----------LLSAFKSGSQYSKALSYFELM-- 201
L + M + P+ T H I +L F + + Y ++
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 202 ---------KGTHIR--------PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECH 244
G +R PD++T N + CL+K + IF+ + +
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVK-- 387
Query: 245 PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV 304
P Y ++ + + + M +G+ S+ SYNA++ + A +
Sbjct: 388 PGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMF 447
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGS 364
E++ G P++V++ + L+ Y +K GV E + + KP++++++ +I+
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 365 NGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR--GIKLNT 422
+ DA +EM + GI+PN ++ L+ +C CS +V A+M+ G+ +
Sbjct: 508 AKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC--CSTGDTDRSVKLFAKMKENGLSPDL 565
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
AYN+ I S+ + + KA L K+M + +K D+ TY+ LI
Sbjct: 566 YAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK----------------- 608
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
A S+ G+ EA F+ ++ GC PD +YT L
Sbjct: 609 ------------------ALSESGRESEAREMFSSIERHGCVPD--SYTKRL 640
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/512 (20%), Positives = 221/512 (43%), Gaps = 9/512 (1%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKN-QRNYCARNDIYNMMIRLHARHNRIDQARGLFF 94
N F+I L + + H + W+ N Y + +++ R + + L
Sbjct: 75 NTRFVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLK 134
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 154
E+++ + E LI + GR G ++ ++ + + PS YN +I+A S
Sbjct: 135 EIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSN 194
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
+ A ++M +G PD T+NIL+ +A+ + M+ RP+ T
Sbjct: 195 SLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYT 254
Query: 215 IVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMML 274
I+I + + D+A+ MR +K +P+ + + +H + + C+A F +++
Sbjct: 255 ILIDGFLIAGRVDEALKQLEMMRVRK--LNPNEATIRTFVH--GIFRCLPPCKA-FEVLV 309
Query: 275 AEGIKPS---IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQ 331
K S V Y+A++ + + M KE +I + G+ PD ++ + ++ +
Sbjct: 310 GFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGH 369
Query: 332 KPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
+ +F+ +KP Y L+ A + + + L++M DG+ +V S
Sbjct: 370 DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYN 429
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
++ + + L+ Q RGI N V +N+ + Y G+ K G+ + +
Sbjct: 430 AVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH 489
Query: 452 KIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEA 511
K D +T++++I+ C+ + +A +EM+ + ++ Y+ ++ + G +
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 512 ESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
F MK +G SPD+ Y + + ++ K+
Sbjct: 550 VKLFAKMKENGLSPDLYAYNATIQSFCKMRKV 581
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/516 (24%), Positives = 224/516 (43%), Gaps = 30/516 (5%)
Query: 40 LIKELTQRGSIEHCNLVFQ--WMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEM 96
L+K + G +E + + W K C N + YN +I + + I+ A +F E+
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKG----CIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+ P ET+ +IN + G + + ++ ++ + S NN+I+A G
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+ + N PD+ T+NIL++ + A+ + + + P+ + +
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM---M 273
I K ++YD A + M E+ C PD+V+Y +IH VSG +++ A NM +
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERG--CKPDIVTYGILIHGLVVSGHMDD---AVNMKVKL 441
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+ G+ P YN L+ G A L+F+E+ PD Y +L++ + RS
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
+AR VF + +K ++V +NA+I + +G+LD+A+ + M ++ + P+ + T+
Sbjct: 502 DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ + + + K N V Y S I + G++ A +K M+ + +
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV-YSSILCAYSKQ------- 505
+ VTYT LI K S E + E+M V EV ++ +L + K+
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA 681
Query: 506 -------GQIVEAESTFNLMKSSGCSPDVVTYTSML 534
GQ F+ MKS G S Y S L
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSAL 717
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 205/498 (41%), Gaps = 58/498 (11%)
Query: 74 NMMIRLHARHN-RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
N +I RH ++D A + + + CKPD TYN LIN + G+ A+ +D+
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIAN-DCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ + P+ +Y LI A S + A + +M + G PD+VT+ IL+
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A++ + + PD N+++ L K ++ A +F+ M ++ PD Y +
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN--ILPDAYVYAT 490
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + SG + F++ + +G+K +V +NA++ + GM EAL N + +
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PD +Y+++++ Y + Q A +F +++NK KPN+V+Y +LI+ + G A
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 373 KILREM---------------------EQDGIQ---------------PNVVSI-CTLLA 395
+ +EM E ++ PN V+ C L
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Query: 396 ACGRCS-------------QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
+ S Q + G + AYNSA+ G A
Sbjct: 671 FVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC 730
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKM--SKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
M KK D V++ ++ G C + SK + F + L V+ YS +L
Sbjct: 731 MFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFC-NLGEKGLEVAVR-YSQVLE 788
Query: 501 AYSKQGQIVEAESTFNLM 518
+ Q I EA + + M
Sbjct: 789 QHLPQPVICEASTILHAM 806
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/535 (21%), Positives = 226/535 (42%), Gaps = 44/535 (8%)
Query: 56 VFQWMKNQR--NYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALIN 113
+F W+ +++ + + + ++L AR+ ++ + ++ K E + +++
Sbjct: 83 LFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLH 142
Query: 114 AHGRAGQWRWAMNIMDDM--LRAAIPP-------------------SRSTYNNLINACGS 152
A+ +G A+ I D + L ++P +R Y+ + + S
Sbjct: 143 AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDS 202
Query: 153 SGNWKEALNVCKKMTDNG---VG-------------PDLVTHNILLSAFKSGSQYSKALS 196
N+ + V K M + G VG P++V +N ++ + A
Sbjct: 203 VDNYSTCILV-KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYL 261
Query: 197 YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHL 256
F+ +K P T +I+ K + + + + ++E+ V +II
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRV--SVWFLNNIIDA 319
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
G + + ++A KP + +YN L+ G + A+ +E + G P+
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 317 IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
+SY L+ AY +S++ A + + KP++V+Y LI +G +DDA+ +
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 377 EMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
++ G+ P+ L++ + + + + S R I + Y + I ++ G
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
++D+A ++ +K +K D V + +I G C+ EAL+ M M L K YS
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 497 SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG--KMNFEPLK 549
+I+ Y KQ + A F M+ + C P+VVTYTS+++ + G KM E K
Sbjct: 560 TIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 17/337 (5%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++I +D A + ++ + PDA YN L++ + G++ A + +ML
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I P Y LI+ SG++ EA V + GV D+V HN ++ F
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+AL+ M H+ PD T + +I VK + AI IF M +K++C P+VV+YTS
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM--EKNKCKPNVVTYTS 595
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI-KQN 311
+I+ + G + E F M + P++V+Y L+ + A E + + E+ N
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 312 GFRPDIVSYTSLLNAYGRSQ------KPQKARG--------VFEMIKRNKLKPNLVSYNA 357
P+ V++ LL + + +P + F +K + + +YN+
Sbjct: 656 KCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNS 715
Query: 358 LIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
+ +G++ A +M + G P+ VS +L
Sbjct: 716 ALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 18/303 (5%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
L+ L + G L+F M + RN +Y +I R D+AR +F E
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLD-RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
K D +NA+I R+G A+ M+ M + P + TY+ +I+ + A
Sbjct: 515 GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ + + M N P++VT+ L++ F + A F+ M+ + P+ T +I
Sbjct: 575 IKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 220 LVKLRQ-YDKAIDIFNSMREKKSECHPDVVSYTSIIHLY--------------SVSGQIE 264
L K +KA+ + M K C P+ V++ ++ + S GQ
Sbjct: 635 LAKESSTLEKAVYYWELMMTNK--CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
F+ M ++G +YN+ + HGM K A + +++ + GF PD VS+ ++L
Sbjct: 693 LFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Query: 325 NAY 327
+ +
Sbjct: 753 HGF 755
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 17/243 (6%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N MI+ R +D+A M E PD TY+ +I+ + + A+ I M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQY 191
+ P+ TY +LIN G++K A K+M + P++VT+ L+ + K S
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVK------LRQYDKA--------IDIFNSMR 237
KA+ Y+ELM P+ T N ++ VK L + D + + F+ M+
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 238 EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGM 297
H +Y S + V G ++ + M+ +G P VS+ A++ + G
Sbjct: 703 SDGWSDH--AAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
Query: 298 GKE 300
K+
Sbjct: 761 SKQ 763
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 220/489 (44%), Gaps = 48/489 (9%)
Query: 93 FFEMQEWRC---KPDAETYNALINAHGRAG---QWRWAMNIMDDMLRAAIPPSRSTYNNL 146
FF++ C + D YN +I R+ ++ +I+D M+++ + + ST N L
Sbjct: 118 FFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNIL 177
Query: 147 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALS-YFELMKGTH 205
I G++ + + L + KK + + T+ LL A+ YSKA Y E+ +G H
Sbjct: 178 IGFFGNTEDLQMCLRLVKKW---DLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGH 234
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
+ D N+++ L K +KA +F M KK C D +YT +I G+ +
Sbjct: 235 -KLDIFAYNMLLDALAK---DEKACQVFEDM--KKRHCRRDEYTYTIMIRTMGRIGKCDE 288
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
FN M+ EG+ ++V YN L+ A M +A+ VF+ + + G RP+ +Y+ LLN
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 326 AYGRSQKPQKARGVFEMIKR--------------NKL------------------KPNLV 353
+ + GV E+ KR +KL K
Sbjct: 349 LLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA 413
SY +++++ G +AI++L ++ + G+ + + T+ +A G+ Q I +
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 414 QMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
+ G + YN I S+ VGE D+A+ +++ + + K D ++Y LI+ K
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
EA +EM L YS+++ + K ++ A S F M GC P++VTY +
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 534 LDAYTAAGK 542
LD G+
Sbjct: 589 LDCLEKNGR 597
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 190/391 (48%), Gaps = 8/391 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YNM++ A+ + Q +F +M++ C+ D TY +I GR G+ A+ + ++M+
Sbjct: 241 YNMLLDALAKDEKACQ---VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI 297
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ + YN L+ +A+ V +M + G P+ T+++LL+ + Q
Sbjct: 298 TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV 357
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+ E+ K + + L + L KL +A +F M + D SY S
Sbjct: 358 RLDGVVEISKRYMTQGIYSYL---VRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SYMS 412
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++ +G+ + + +G+ + YN + A +F ++K++G
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
PDI +Y L+ ++GR + +A +FE ++R+ KP+++SYN+LI+ G NG +D+A
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+EM++ G+ P+VV+ TL+ G+ + ++ ++G + N V YN +
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
G +A+ LY M+++ + DS+TYT+L
Sbjct: 593 EKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/553 (23%), Positives = 234/553 (42%), Gaps = 72/553 (13%)
Query: 7 EVAEQVLSLTLYDDIDGLL-NRWVGRFARKNFPFLIKELTQ----------RGSIEHCNL 55
E + V SL Y D L NR + +R N P + G+I N+
Sbjct: 117 EFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNI 176
Query: 56 VFQWMKNQRNY--CAR----------NDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKP 103
+ + N + C R + Y +++ + R +A ++ E++ K
Sbjct: 177 LIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKL 236
Query: 104 DAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 163
D YN L++A + + A + +DM + TY +I G G EA+ +
Sbjct: 237 DIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV-- 221
+M G+ ++V +N L+ G KA+ F M T RP+ T +++++ LV
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 222 -KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
+L + D ++I S+ + Y+ ++ S G + F M + +K
Sbjct: 354 GQLVRLDGVVEI--------SKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG 405
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
SY +++ + G EA+ + ++I + G D + Y ++ +A G+ ++ +F
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRC 400
E +K++ P++ +YN LI ++G G +D+AI I E+E+ +P+++S
Sbjct: 466 EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIIS----------- 514
Query: 401 SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
YNS I G+ D+A +K M++K + D VTY
Sbjct: 515 ------------------------YNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
+ L+ K + A S EEM+ + Y+ +L K G+ EA ++ MK
Sbjct: 551 STLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQ 610
Query: 521 SGCSPDVVTYTSM 533
G +PD +TYT +
Sbjct: 611 QGLTPDSITYTVL 623
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN + + +I LF +M++ PD TYN LI + GR G+ A+NI +++
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
R+ P +YN+LIN G +G+ EA K+M + G+ PD+VT++ L+ F +
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A S FE M +P+ T NI++ CL K + +A+D+++ M K+ PD ++YT
Sbjct: 564 EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM--KQQGLTPDSITYT 621
Query: 252 SIIHLYSVS 260
+ L SVS
Sbjct: 622 VLERLQSVS 630
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 170/421 (40%), Gaps = 60/421 (14%)
Query: 143 YNNLINACGSSG---NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFE 199
YN +I S + ++ M + V ++ T NIL+ F + L
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCL---R 192
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
L+K ++ ++ T ++ ++ R Y KA D++ +R
Sbjct: 193 LVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRG-------------------- 232
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
G K I +YN L+ A A ++A VF ++K+ R D +
Sbjct: 233 -----------------GHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRHCRRDEYT 272
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
YT ++ GR K +A G+F + L N+V YN L+ ++D AI++ M
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMV 332
Query: 380 QDGIQPNVVS---ICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
+ G +PN + + LL A G+ + + + +GI Y+ + + +G
Sbjct: 333 ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI------YSYLVRTLSKLG 386
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
+A L+ M +K + +Y ++ C K EA+ + ++ + +Y+
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 497 SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN-----FEPLKYE 551
++ A K QI F MK G SPD+ TY ++ ++ G+++ FE L+
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 552 D 552
D
Sbjct: 507 D 507
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 189/399 (47%), Gaps = 3/399 (0%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
Y +IN+ S + +++ +M DNG P N LL+ S +++ S+F K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
+ + D + I+I + + +K+ D+ + E P+VV YT++I G+
Sbjct: 157 -SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFS--PNVVIYTTLIDGCCKKGE 213
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
IE + F M G+ + +Y L+ +G+ K+ ++ +++++G P++ +Y
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
++N + + + A VF+ ++ + N+V+YN LI L++A K++ +M+ DG
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
I PN+++ TL+ + GK ++ + RG+ + V YN + + G+ A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAY 502
+ K M ++ IK VTYTILI + +A+ M L L YS ++ +
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 503 SKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+GQ+ EA F M C P+ V Y +M+ Y G
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 219/473 (46%), Gaps = 15/473 (3%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALIN---AHGRAGQWRWAMNIM 128
+Y ++I + + ++ + F EM + P + +N L+ QW W+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQW-WSFFNE 154
Query: 129 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
+ ++ + ++ LI C +G +++ ++ ++T+ G P++V + L+
Sbjct: 155 N---KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
+ KA F M + + T ++I+ L K + +++ M+E P++
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG--VFPNLY 269
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
+Y +++ G+ ++ F+ M G+ +IV+YN L+G EA V +++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
K +G P++++Y +L++ + K KA + +K L P+LV+YN L+ + G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK-IETVLSAAQMRGIKLNTVAYNS 427
A K+++EME+ GI+P+ V+ L+ R K I+ LS ++ G+ + Y+
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL-GLVPDVHTYSV 448
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK 487
I + G+ ++A L+KSM +K + + V Y +I G CK AL ++EM +
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 488 LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
L + Y ++ K+ + EAE M SG P TS+L + A
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS----TSILSLISRA 557
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 182/370 (49%), Gaps = 9/370 (2%)
Query: 178 HNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
+ ++++++ + ++SYF M P + N ++ +V +++ FN
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN--- 153
Query: 238 EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM--LAE-GIKPSIVSYNALVGAYAA 294
E KS+ DV S+ +I +G+IE +F+++ L E G P++V Y L+
Sbjct: 154 ENKSKVVLDVYSFGILIKGCCEAGEIEK---SFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
G ++A +F E+ + G + +YT L+N ++ ++ ++E ++ + + PNL +
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
YN +++ +G DA ++ EM + G+ N+V+ TL+ R + + V+ +
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
GI N + YN+ I + VG+ KAL L + ++ + + VTY IL+SG C+
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 475 EALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
A ++EM + SK Y+ ++ +++ + +A M+ G PDV TY+ ++
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 535 DAYTAAGKMN 544
+ G+MN
Sbjct: 451 HGFCIKGQMN 460
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 163/359 (45%), Gaps = 10/359 (2%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI ++G IE +F M + A Y ++I ++ Q ++ +MQE
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEM-GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P+ TYN ++N + G+ + A + D+M + + TYN LI EA
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
V +M +G+ P+L+T+N L+ F + KALS +K + P T NI++
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE--- 276
+ A + M E+ P V+YT +I ++ S +N E A + L+
Sbjct: 383 FCRKGDTSGAAKMVKEMEERG--IKPSKVTYTILIDTFARS---DNMEKAIQLRLSMEEL 437
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G+ P + +Y+ L+ + G EA +F + + P+ V Y +++ Y + +A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+ + ++ +L PN+ SY +I+ +A +++ +M GI P+ SI +L++
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS-TSILSLIS 555
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 1/269 (0%)
Query: 275 AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQ 334
+E K Y ++ +Y ++ FNE+ NGF P + LL S
Sbjct: 87 SETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFN 146
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
+ F ++K+ ++ S+ LI G ++ + +L E+ + G PNVV TL+
Sbjct: 147 QWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 395 AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
C + + K + + G+ N Y I G + +Y+ M++ +
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF 265
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
+ TY +++ CK + +A +EM + + Y++++ ++ ++ EA
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ MKS G +P+++TY +++D + GK+
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKL 354
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 211/438 (48%), Gaps = 7/438 (1%)
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLR-AAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
Y+ ++ GR +W A +++ ++ S +N +I AC GN K A M
Sbjct: 177 YSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMM 236
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
+ GV P++ T +L+ ++ +A F M+ I ++ + +I +LR Y
Sbjct: 237 LEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMITIYTRLRLY 295
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
DKA ++ + M++ + + ++ +++ YS G++E E+ M A G P+I++YN
Sbjct: 296 DKAEEVIDLMKQDRVRLKLE--NWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
L+ Y + A +F+ + G PD SY S++ +GR+ ++A+ ++ +KR
Sbjct: 354 TLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRC 413
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
KPN + LI+ G D AIK + +M G Q + + + +L A + + +
Sbjct: 414 GYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEKVGKIDVV 472
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
VL + I+LN +++S + +Y+ G D LGL + + + +S Y +LI
Sbjct: 473 PCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLIC- 531
Query: 467 SCKMS-KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
SCK S + +A+ M ++ + S+++ Y+ G+ EAE + +KSSG
Sbjct: 532 SCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVL 591
Query: 526 DVVTYTSMLDAYTAAGKM 543
D + ++ ++ Y AG +
Sbjct: 592 DRIGFSIVVRMYVKAGSL 609
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/570 (21%), Positives = 229/570 (40%), Gaps = 52/570 (9%)
Query: 9 AEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCA 68
AE+V+ L D + R +N+ ++ +Q+G +E + M+ +
Sbjct: 298 AEEVIDLMKQDRV---------RLKLENWLVMLNAYSQQGKMELAESILVSME-AAGFSP 347
Query: 69 RNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIM 128
YN +I + + +++ A+GLF + +PD +Y ++I GRA + A +
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYY 407
Query: 129 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVT-HNILLSAFKS 187
++ R P+ LIN G+ A+ + MT G+G + I+L A++
Sbjct: 408 QELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMT--GIGCQYSSILGIILQAYEK 465
Query: 188 GSQYSKALSYFELMKGTHIRPDTTTLN----------IVIHCLVKLR------------- 224
+ + HIR + T+ + +V CL LR
Sbjct: 466 VGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL 525
Query: 225 ------------QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
Q A+ I+N E E + + S ++I +Y+V G+ E +
Sbjct: 526 YHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITS--TMIDIYTVMGEFSEAEKLYLN 583
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI-KQNGFRPDIVSYTSLLNAYGRSQ 331
+ + G+ + ++ +V Y G +EA V + +Q PD+ + +L Y +
Sbjct: 584 LKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCD 643
Query: 332 KPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
K + ++ I+++ + N YN +I+ LD+ EM + G PN V+
Sbjct: 644 LQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFN 703
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
LL G+ K+ + A+ G+ ++ ++YN+ I +Y +Y K+M+
Sbjct: 704 VLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD 762
Query: 452 KIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEA 511
Y L+ K + + S ++ M Y+ ++ Y +QG I E
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 512 ESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+K SG PD+ +Y +++ AY G
Sbjct: 823 ADVLKELKESGLGPDLCSYNTLIKAYGIGG 852
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 192/409 (46%), Gaps = 6/409 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKP-DAETYNALINAHGRAGQWRWAMNIMDDM 131
++ ++ + +H +D GL E ++WR ++ Y+ LI + +GQ A+ I +
Sbjct: 491 FSSLVMAYVKHGMVDDCLGLLRE-KKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHK 549
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + + + +I+ G + EA + + +GV D + +I++ +
Sbjct: 550 MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSL 609
Query: 192 SKALSYFELM-KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+A S E+M + I PD ++ K DK ++ +R KS H + Y
Sbjct: 610 EEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIR--KSGIHWNQEMY 667
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
+I+ + + ++ F M+ G P+ V++N L+ Y + K+ +F K+
Sbjct: 668 NCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKR 727
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
+G D++SY +++ AYG+++ + ++ + +L +YN L+DAYG + ++
Sbjct: 728 HGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEK 786
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
IL+ M++ P+ + ++ G ++ VL + G+ + +YN+ I
Sbjct: 787 FRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIK 846
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
+Y G ++A+GL K MR + I D VTYT L++ + ++ EA+ +
Sbjct: 847 AYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKW 895
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/567 (20%), Positives = 221/567 (38%), Gaps = 83/567 (14%)
Query: 49 SIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETY 108
++E F M+ C Y+ MI ++ R D+A + M++ R + E +
Sbjct: 260 NVEEAEFAFSHMRKFGIVC--ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENW 317
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
++NA+ + G+ A +I+ M A P+ YN LI G + A + ++ +
Sbjct: 318 LVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCN 377
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
G+ PD ++ ++ + Y +A Y++ +K +P++ L +I+ K D
Sbjct: 378 IGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDG 437
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHL----YSVSGQIENCEAAFNMMLAEGIKPSIVS 284
AI M + Y+SI+ + Y G+I+ I+ + S
Sbjct: 438 AIKTIEDMTGIGCQ-------YSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTS 490
Query: 285 YNALVGAYAAHGMGKEALLVFNE-------------------IKQNGFRPDIVSY----- 320
+++LV AY HGM + L + E K++G D V
Sbjct: 491 FSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKM 550
Query: 321 -----------TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
+++++ Y + +A ++ +K + + + + ++ ++ Y G L+
Sbjct: 551 ESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLE 610
Query: 370 DAIKILREM-EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+A +L M EQ I P+V +L +C + K++ + + GI N YN
Sbjct: 611 EACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCV 670
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS--GSCKMSK-------------- 472
I D+ G ++ M + ++VT+ +L+ G K+ K
Sbjct: 671 INCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV 730
Query: 473 ------------------YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
Y S ++ M VS E Y+++L AY K Q+ + S
Sbjct: 731 VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSI 790
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAG 541
MK S PD TY M++ Y G
Sbjct: 791 LKRMKKSTSGPDHYTYNIMINIYGEQG 817
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 168/369 (45%), Gaps = 2/369 (0%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
Y+ LI +C SG +A+ + ++ +L + ++ + ++S+A + +K
Sbjct: 526 YHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLK 585
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
+ + D +IV+ VK ++A + M E+K + PDV + ++ +Y
Sbjct: 586 SSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK-DIVPDVYLFRDMLRIYQKCDL 644
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
+ + + + GI + YN ++ A E F E+ + GF P+ V++
Sbjct: 645 QDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNV 704
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
LL+ YG+++ +K +F + KR+ + +++SYN +I AYG N + ++ M+ DG
Sbjct: 705 LLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDG 763
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
++ + TLL A G+ Q K ++L + + YN I Y G D+
Sbjct: 764 FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVA 823
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAY 502
+ K +++ + D +Y LI EA+ ++EM + K Y++++ A
Sbjct: 824 DVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Query: 503 SKQGQIVEA 511
+ + +EA
Sbjct: 884 RRNDEFLEA 892
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 148/331 (44%), Gaps = 8/331 (2%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWA---MNIM 128
I + MI ++ +A L+ ++ D ++ ++ + +AG A + IM
Sbjct: 560 ITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Query: 129 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
D+ + I P + +++ + ++ ++ +G+ + +N +++
Sbjct: 620 DE--QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARA 677
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
+ FE M P+T T N+++ K + + K ++F K DV+
Sbjct: 678 LPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF---LLAKRHGVVDVI 734
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
SY +II Y + N +A M +G S+ +YN L+ AY ++ + +
Sbjct: 735 SYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRM 794
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
K++ PD +Y ++N YG + V + +K + L P+L SYN LI AYG G++
Sbjct: 795 KKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMV 854
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGR 399
++A+ +++EM I P+ V+ L+ A R
Sbjct: 855 EEAVGLVKEMRGRNIIPDKVTYTNLVTALRR 885
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 142/350 (40%), Gaps = 38/350 (10%)
Query: 34 RKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLF 93
R F +++ + GS+E V + M Q++ ++ M+R++ + + D+ + L+
Sbjct: 593 RIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLY 652
Query: 94 FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 153
+ ++ ++ I ++ YN +IN C +
Sbjct: 653 YRIR-----------------------------------KSGIHWNQEMYNCVINCCARA 677
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
E ++M G P+ VT N+LL + + K F L K H D +
Sbjct: 678 LPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAK-RHGVVDVISY 736
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N +I K + Y +M+ + +Y +++ Y Q+E + M
Sbjct: 737 NTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE--AYNTLLDAYGKDKQMEKFRSILKRM 794
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
P +YN ++ Y G E V E+K++G PD+ SY +L+ AYG
Sbjct: 795 KKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMV 854
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
++A G+ + ++ + P+ V+Y L+ A N +AIK M+Q GI
Sbjct: 855 EEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 194/399 (48%), Gaps = 12/399 (3%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
L+N G EA V K + + G P L+++ LL+A QY S ++ +
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
+ D+ N VI+ + + A+ M+E +P +Y ++I Y ++G+ E
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELG--LNPTTSTYNTLIKGYGIAGKPER 168
Query: 266 CEAAFNMMLAEG---IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
++ML EG + P+I ++N LV A+ +EA V ++++ G RPD V+Y +
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 323 LLNAYGRSQKPQKARG----VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+ Y QK + R V +M+ + K KPN + ++ Y G + D ++ +R M
Sbjct: 229 IATCY--VQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
++ ++ N+V +L+ + I+ VL+ + +K + + Y++ + ++ + G
Sbjct: 287 KEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYM 346
Query: 439 DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSI 498
+KA ++K M K +K D+ Y+IL G + + +A +E ++ P + +++++
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTV 405
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAY 537
+ + G + +A FN M G SP++ T+ +++ Y
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 174/352 (49%), Gaps = 8/352 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N +I + ++ A +M+E P TYN LI +G AG+ + ++D ML
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 133 RAA---IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGS 189
+ P+ T+N L+ A +EA V KKM + GV PD VT+N + + +
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 190 QYSKALSYF--ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDV 247
+ +A S +++ +P+ T IV+ + + + M+E + E ++
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA--NL 295
Query: 248 VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
V + S+I+ + + + +M +K +++Y+ ++ A+++ G ++A VF E
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
+ + G +PD +Y+ L Y R+++P+KA + E + +PN+V + +I + SNG
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGS 414
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
+DDA+++ +M + G+ PN+ + TL+ Q K E VL + G+K
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 466
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/483 (20%), Positives = 209/483 (43%), Gaps = 47/483 (9%)
Query: 64 RNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
R +R + N++I R +A+ +F + E +P +Y L+ A Q+
Sbjct: 43 RTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGS 98
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
+I+ ++ ++ +N +INA SGN ++A+ KM + G+ P T+N L+
Sbjct: 99 ISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIK 158
Query: 184 AFKSGSQYSKALSYFELM---KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
+ + ++ +LM + P+ T N+++ K ++ ++A ++ M E
Sbjct: 159 GYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE-- 216
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAF--NMMLAEGIKPSIVSYNALVGAYAAHGMG 298
PD V+Y +I Y G+ E+ M++ E KP+ + +VG Y G
Sbjct: 217 CGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
++ L +K+ ++V + SL+N + V ++K +K ++++Y+ +
Sbjct: 277 RDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTV 336
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
++A+ S G ++ A ++ +EM + G++P+ + L R + K E +L +
Sbjct: 337 MNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES- 395
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
+ N V + + I + + G D A+ ++ KM K+G + +
Sbjct: 396 RPNVVIFTTVISGWCSNGSMDDAMRVFN----------------------KMCKFGVSPN 433
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
+ + +++ Y + Q +AE +M+ G P+ T+ + +A+
Sbjct: 434 I-------------KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWR 480
Query: 539 AAG 541
AG
Sbjct: 481 VAG 483
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 183/377 (48%), Gaps = 27/377 (7%)
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+G QY S E +R T +N++I + R ++ A +F ++ E P
Sbjct: 26 TGGQYRFCKSCVEGSSCRTVRSRTKLMNVLIE---RGRPHE-AQTVFKTLAETGH--RPS 79
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
++SYT+++ +V Q + + + + G K + +NA++ A++ G ++A+
Sbjct: 80 LISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALL 139
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN---KLKPNLVSYNALIDAYG 363
++K+ G P +Y +L+ YG + KP+++ + +++ + PN+ ++N L+ A+
Sbjct: 140 KMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWC 199
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI-----ETVLSAAQMRGI 418
+++A +++++ME+ G++P+ V+ T+ A C QKG+ E V
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTI-ATC--YVQKGETVRAESEVVEKMVMKEKA 256
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK-MSKYG--E 475
K N +G Y G L + M++ +++A+ V + LI+G + M + G E
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
L+ M+E ++K V YS+++ A+S G + +A F M +G PD Y+ +
Sbjct: 317 VLTLMKEC-NVKADVI--TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAK 373
Query: 536 AYTAAGKMNFEPLKYED 552
Y A EP K E+
Sbjct: 374 GYVRAK----EPKKAEE 386
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 192/469 (40%), Gaps = 75/469 (15%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N++I+ + +D+A +F M E +C PD TY L++ + + A+ ++D+M
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
PS YN LI+ G+ + M G P+ VT+N L+ +
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
KA+S E M + P+ T +I+ LVK R+ A+ + +SM E+ + + Y+
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI--YSV 367
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G+ E + + M +G KP+IV Y+ LV G EA + N + +G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P+ +Y+SL+ + ++ ++A V++ + + N Y+ LID G + +A+
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+ +M GI+P +TVAY+S I
Sbjct: 488 MVWSKMLTIGIKP-----------------------------------DTVAYSSIIKGL 512
Query: 433 LNVGEYDKALGLYKSM---RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
+G D AL LY M + K + D VTY IL+ G C
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC--------------------- 551
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
Q I A N M GC PDV+T + L+ +
Sbjct: 552 --------------MQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 172/402 (42%), Gaps = 44/402 (10%)
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTH----IRPDTTTLNIVIHCLVKLRQYDKAIDI 232
+ N +L+ + Y + L +++ + ++ I P+ + N+VI L KLR D+AI++
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
F M E+K C PD +Y +++ +I+ + M +EG PS V YN L+
Sbjct: 210 FRGMPERK--CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
G + + + G P+ V+Y +L++ K KA + E + +K PN
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 353 VSYNALIDAYGSNGLLDDAIKIL-----------------------------------RE 377
V+Y LI+ DA+++L R+
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
M + G +PN+V L+ R + + + +L+ G N Y+S + + G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
++A+ ++K M K + Y++LI G C + + EA+ +M+ + + YSS
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 498 ILCAYSKQGQIVEAESTFNLM---KSSGCSPDVVTYTSMLDA 536
I+ G + A ++ M + PDVVTY +LD
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 5/301 (1%)
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAE-GIKPSIVSYNALVGAYAAHGMGKEAL----L 303
S+ + Y + + F+ M+ E K S+ S+N+++ G+ L
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
V N P+ +S+ ++ A + + +A VF + K P+ +Y L+D
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
+D+A+ +L EM+ +G P+ V L+ + ++ ++ ++G N V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
YN+ I G+ DKA+ L + M K + VTY LI+G K + +A+ + M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+++ +YS ++ K+G+ EA S + M GC P++V Y+ ++D GK
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 544 N 544
N
Sbjct: 414 N 414
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 63 QRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
+R Y IY+++I + + ++A L+ +M E CKP+ Y+ L++ R G+
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
A I++ M+ + P+ TY++L+ +G +EA+ V K+M G + +++L+
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR-EKKS 241
+ +A+ + M I+PDT + +I L + D A+ +++ M +++
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEP 534
Query: 242 ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
+ PDVV+Y ++ + I N ML G P +++ N + +
Sbjct: 535 KSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 24 LLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRL 79
+LNR + N + L+K + G E V W + + C+RN Y+++I
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA--VQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 80 HARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP-- 137
R+ +A ++ +M KPD Y+++I G A+ + +ML P
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 138 -PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGS------- 189
P TYN L++ + A+++ M D G PD++T N L+ S
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR 596
Query: 190 --------------QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
+ S A + E+M G ++ P T+T +++ + K ++ + AID
Sbjct: 597 SFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 198/466 (42%), Gaps = 53/466 (11%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
++ + ARHN++ P + + L+ R Q AM I+ M+ +
Sbjct: 126 LVEVMARHNQV----------------PHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
P TYN +I G+ + AL + + M+ +G PD++T+N ++ +A+
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
+++ P T +++ + + +AI++ M + C+PD+V+Y S+++
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEG--CYPDIVTYNSLVN 287
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
G +E + +L+ G++ + V+YN L+ + +H E + N + Q + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
+++Y L+N +++ +A F + K P++V+YN ++ A G++DDAI++L
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
++ P +++ YNS I
Sbjct: 408 GLLKNTCCPPGLIT-----------------------------------YNSVIDGLAKK 432
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
G KAL LY M I D +T LI G C+ + EA ++E + + Y
Sbjct: 433 GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTY 492
Query: 496 SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++ K+ +I A +M + GC PD YT+++ G
Sbjct: 493 RLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 176/402 (43%), Gaps = 2/402 (0%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
++R AR +++D+A + M PD TYN +I + G R A+ +++DM +
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
PP TYN +I GN ++A+ K NG P ++T+ +L+ ++A+
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
E M PD T N +++ + ++ + + E + V+Y +++H
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLEL--NTVTYNTLLH 322
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
+ E N+M P++++YN L+ + A+ F ++ + P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
DIV+Y ++L A + A + ++K P L++YN++ID GL+ A+++
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
+M GI P+ ++ +L+ R + + VL RG + Y I
Sbjct: 443 HQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKK 502
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEAL 477
E + A+ + + M K D YT ++ G +M EA+
Sbjct: 503 KEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 168/397 (42%), Gaps = 41/397 (10%)
Query: 151 GSSGNWKEALNVCKKMTDNGVGP----DLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
G N + + K+ + GP D T+N +L S + + A E+M +
Sbjct: 76 GVGTNLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQ 135
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
P + + ++ L ++ Q DKA+ I M S PD ++Y II G I
Sbjct: 136 VPHFPSCSNLVRGLARIDQLDKAMCILRVM--VMSGGVPDTITYNMIIGNLCKKGHIRTA 193
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
M G P +++YN ++ +G ++A+ + + QNG P +++YT L+
Sbjct: 194 LVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVEL 253
Query: 327 YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
R +A V E + P++V+YN+L++ G L++ +++ + G++
Sbjct: 254 VCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLE-- 311
Query: 387 VVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYK 446
LNTV YN+ + S + +D+ +
Sbjct: 312 ---------------------------------LNTVTYNTLLHSLCSHEYWDEVEEILN 338
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQG 506
M + +TY ILI+G CK A+ F +M+ K Y+++L A SK+G
Sbjct: 339 IMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEG 398
Query: 507 QIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ +A L+K++ C P ++TY S++D G M
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLM 435
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 143/317 (45%), Gaps = 7/317 (2%)
Query: 59 WMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGR 117
W +N C I Y +++ L R+ +A + +M C PD TYN+L+N + R
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 118 AGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVT 177
G +++ +L + + TYN L+++ S W E + M P ++T
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 178 HNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
+NIL++ S+A+ +F M PD T N V+ + K D AI++ +
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLL- 410
Query: 238 EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGM 297
K + C P +++Y S+I + G ++ ++ ML GI P ++ +L+ + +
Sbjct: 411 -KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANL 469
Query: 298 GKEALLVFNEI--KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY 355
+EA V E + NG R +Y ++ + ++ + A V E++ KP+ Y
Sbjct: 470 VEEAGQVLKETSNRGNGIRGS--TYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527
Query: 356 NALIDAYGSNGLLDDAI 372
A++ G+ +A+
Sbjct: 528 TAIVKGVEEMGMGSEAV 544
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 145/353 (41%), Gaps = 45/353 (12%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YNM+I + I A L +M PD TYN +I G A+ D L
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQL 236
Query: 133 RAAIPPSRSTYNNLINA----CGSSGNWKEALNVCKKMTDNGVGPDLVTH---------- 178
+ PP TY L+ CGS+ A+ V + M G PD+VT+
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGSA----RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRR 292
Query: 179 -------------------------NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
N LL + S + + +M T P T
Sbjct: 293 GNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITY 352
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
NI+I+ L K R +AID F M E+K C PD+V+Y +++ S G +++ ++
Sbjct: 353 NILINGLCKARLLSRAIDFFYQMLEQK--CLPDIVTYNTVLGAMSKEGMVDDAIELLGLL 410
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
P +++YN+++ A G+ K+AL +++++ G PD ++ SL+ + R+
Sbjct: 411 KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV 470
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
++A V + +Y +I ++ AI+++ M G +P+
Sbjct: 471 EEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 143/339 (42%), Gaps = 43/339 (12%)
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
D T N ++H L + A + M P S ++++ + Q++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQV--PHFPSCSNLVRGLARIDQLDKAMC 160
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
+M+ G P ++YN ++G G + AL++ ++ +G PD+++Y +++
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
++A ++ +N P +++Y L++ AI++L +M +G P++V
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQM---RGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
+ +L+ R +G +E V S Q G++LNTV YN+ + S + +D+ +
Sbjct: 281 TYNSLVNYNCR---RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQ 505
M + +TY ILI+G CK A+ F +M+ K
Sbjct: 338 NIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK------------------ 379
Query: 506 GQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
C PD+VTY ++L A + G ++
Sbjct: 380 -----------------CLPDIVTYNTVLGAMSKEGMVD 401
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 198/422 (46%), Gaps = 10/422 (2%)
Query: 82 RHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS 141
+ RID +F M + K + ++ R G+ + ++ + I P
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
TYN +INA ++ V K M +GV + VT+ +L+ + S A F+ M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
+ I D +I + +A +F+ + EK P +Y ++I G
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG--LSPSSYTYGALIDGVCKVG 378
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
++ E N M ++G+ + V +N L+ Y GM EA ++++ ++Q GF+ D+ +
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 322 SLLNAYGRSQKPQKARG-VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
++ + + R ++ +A+ +F M++ +K + VSY LID Y G +++A ++ EM
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMME-GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIE---TVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
G+QPN ++ ++ A C Q GKI+ + + + G+ ++ Y S I
Sbjct: 498 KGVQPNAITYNVMIYA--YCKQ-GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
D+A+ L+ M K + +SVTYT++ISG K K EA +EM + +VY++
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614
Query: 498 IL 499
++
Sbjct: 615 LI 616
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 189/425 (44%), Gaps = 4/425 (0%)
Query: 119 GQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTH 178
G + + + D M++ + + + A L + ++M D+GV + +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
I++ + K+ + I+P+ T N +I+ VK R + + M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM-- 285
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
KK + V+YT ++ L +G++ + E F+ M GI+ + Y +L+ G
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
K A L+F+E+ + G P +Y +L++ + + A + ++ + V +N L
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC-GRCSQKGKIETVLSAAQMRG 417
ID Y G++D+A I MEQ G Q +V + C +A+C R + + + L G
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFT-CNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 418 IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEAL 477
+KL+TV+Y + I Y G ++A L+ M K ++ +++TY ++I CK K EA
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 478 SFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAY 537
M + Y+S++ + EA F+ M G + VTYT M+
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 538 TAAGK 542
+ AGK
Sbjct: 585 SKAGK 589
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 167/365 (45%), Gaps = 2/365 (0%)
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
+++ + + + L F+ M + D + + + K R+ D ++IF M +
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
S V S T ++ G++E + +GIKP +YN ++ AY
Sbjct: 218 --SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
V +K++G + V+YT L+ ++ K A +F+ ++ ++ ++ Y +L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
I G + A + E+ + G+ P+ + L+ + + G E +++ Q +G+
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
+ V +N+ I Y G D+A +Y M +K +AD T + S ++ +Y EA
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
++ MM + +S Y++++ Y K+G + EA+ F M S G P+ +TY M+ AY
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 539 AAGKM 543
GK+
Sbjct: 516 KQGKI 520
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 189/477 (39%), Gaps = 96/477 (20%)
Query: 6 SEVAEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHC---NLVFQWMKN 62
S V V SLT+ ++GL R ++K LIKE + +G N +
Sbjct: 218 SGVKITVYSLTIV--VEGLCRRGEVEKSKK----LIKEFSVKGIKPEAYTYNTIINAYVK 271
Query: 63 QRNYCARNDI---------------YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAET 107
QR++ + Y +++ L ++ ++ A LF EM+E + D
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
Y +LI+ + R G + A + D++ + PS TY LI+ G A + +M
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 168 DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 227
GV V N L+ + +A +++M+ + D T N + C +L++YD
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
+A + F MM G+K S VSY
Sbjct: 452 EAK------------------------------------QWLFRMMEG-GVKLSTVSYTN 474
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
L+ Y G +EA +F E+ G +P+ ++Y ++ AY + K ++AR + ++ N
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE 407
+ P+ +Y +LI +D+A+++ EM
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEM----------------------------- 565
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
++G+ N+V Y I G+ D+A GLY M++K D+ YT LI
Sbjct: 566 ------GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 147/344 (42%), Gaps = 22/344 (6%)
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI--KPSIVSYNA 287
ID F +RE +S PD+ + ++ H + + + N ++ +G +P +A
Sbjct: 80 IDFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSA 139
Query: 288 LVG--------------------AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
+V Y +GM +E L VF+ + + G D S L A
Sbjct: 140 MVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAA 199
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
+ ++ +F + + +K + S +++ G ++ + K+++E GI+P
Sbjct: 200 KKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEA 259
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
+ T++ A + +E VL + G+ N V Y + + G+ A L+
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
MR++ I++D YT LIS +C+ A +E+ L S Y +++ K G+
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
+ AE N M+S G + V + +++D Y G ++ + Y+
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 189/403 (46%), Gaps = 9/403 (2%)
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF--KSGSQYSKALSYFE 199
TYN L + +G A + + M +GV P+ L+S+F K ++ AL
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL---- 160
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
L++ + +N +++ LVKL + + A+ +F+ +S C+ D ++ +I
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQS-CN-DTKTFNILIRGLCG 218
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF-RPDIV 318
G+ E +M G +P IV+YN L+ + +A +F ++K PD+V
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 319 SYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+YTS+++ Y ++ K ++A + + + R + P V++N L+D Y G + A +I +M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
G P+VV+ +L+ R Q + + RG+ N Y+ I + N
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 439 DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSI 498
KA L + K I Y +I G CK K EA +EEM K K ++ +
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+ + +G++ EA S F+ M + GCSPD +T +S+L AG
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 194/456 (42%), Gaps = 39/456 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++ R + D A +F M+ P+ L+++ G+ +A ++ +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQ 163
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ N+L+N ++A+ + + D T NIL+ +
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
KAL +M G PD T N +I K + +KA ++F ++ S C PDVV+YTS
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG-SVCSPDVVTYTS 282
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I Y +G++ + + ML GI P+ V++N LV YA G +L EI
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG----EMLTAEEI---- 334
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
R ++S+ G F P++V++ +LID Y G +
Sbjct: 335 -RGKMISF-----------------GCF---------PDVVTFTSLIDGYCRVGQVSQGF 367
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ EM G+ PN + L+ A ++ K +L + I YN I +
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ ++A + + M KKK K D +T+TILI G C + EA+S +M+ + K
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
SS+L K G EA N + G S +VV
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVV 522
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 162/359 (45%), Gaps = 8/359 (2%)
Query: 39 FLIKELTQRGSIEHCN-LVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQ 97
FL+ ++G + L+ Q + + N + N +++L +R++ A LF E
Sbjct: 143 FLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKL----DRVEDAMKLFDEHL 198
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
++ D +T+N LI G+ A+ ++ M P TYN LI S
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 158 EALNVCKKMTDNGV-GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+A + K + V PD+VT+ ++S + + +A S + M I P T N++
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+ K + A +I M C PDVV++TS+I Y GQ+ + M A
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMIS--FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G+ P+ +Y+ L+ A +A + ++ P Y +++ + ++ K +A
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+ E +++ K KP+ +++ LI + G + +A+ I +M G P+ +++ +LL+
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 134/269 (49%), Gaps = 5/269 (1%)
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
I+ S +YN L + G+ A +F +K +G P+ L++++ K A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL-AA 396
+ +++ +++ + N+L++ ++DA+K+ E + + + L+
Sbjct: 159 AL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI-KA 455
CG + +E +L G + + V YN+ I + E +KA ++K ++ +
Sbjct: 217 CGVGKAEKALE-LLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
D VTYT +ISG CK K EA S +++M+ L + + ++ ++ Y+K G+++ AE
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
M S GC PDVVT+TS++D Y G+++
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 145/369 (39%), Gaps = 40/369 (10%)
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
T+N+L + + A FE MK + P+ L ++ + + A +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
E + C + S+++ ++E+ F+ L ++N L+ G
Sbjct: 165 FEVEGCC----MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL-KPNLVSY 355
++AL + + G PDIV+Y +L+ + +S + KA +F+ +K + P++V+Y
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
++I Y G + +A +L +M + GI P
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPT----------------------------- 311
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
V +N + Y GE A + M D VT+T LI G C++ + +
Sbjct: 312 ------NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
EEM + + YS ++ A + ++++A + S P Y ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 536 AYTAAGKMN 544
+ AGK+N
Sbjct: 426 GFCKAGKVN 434
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN +I + ++++A + EM++ +CKPD T+ LI H G+ A++I M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALN---VCKKMTDNGVGP-DLVTHNILLSA 184
+ P + T ++L++ +G KEA + + +K N V P + T N L+A
Sbjct: 479 VAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATLAA 535
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 189/403 (46%), Gaps = 9/403 (2%)
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF--KSGSQYSKALSYFE 199
TYN L + +G A + + M +GV P+ L+S+F K ++ AL
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL---- 160
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
L++ + +N +++ LVKL + + A+ +F+ +S C+ D ++ +I
Sbjct: 161 LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQS-CN-DTKTFNILIRGLCG 218
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF-RPDIV 318
G+ E +M G +P IV+YN L+ + +A +F ++K PD+V
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 319 SYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+YTS+++ Y ++ K ++A + + + R + P V++N L+D Y G + A +I +M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
G P+VV+ +L+ R Q + + RG+ N Y+ I + N
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 439 DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSI 498
KA L + K I Y +I G CK K EA +EEM K K ++ +
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+ + +G++ EA S F+ M + GCSPD +T +S+L AG
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 194/456 (42%), Gaps = 39/456 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN++ R + D A +F M+ P+ L+++ G+ +A ++ +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQ 163
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ N+L+N ++A+ + + D T NIL+ +
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
KAL +M G PD T N +I K + +KA ++F ++ S C PDVV+YTS
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG-SVCSPDVVTYTS 282
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I Y +G++ + + ML GI P+ V++N LV YA G +L EI
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG----EMLTAEEI---- 334
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
R ++S+ G F P++V++ +LID Y G +
Sbjct: 335 -RGKMISF-----------------GCF---------PDVVTFTSLIDGYCRVGQVSQGF 367
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++ EM G+ PN + L+ A ++ K +L + I YN I +
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ ++A + + M KKK K D +T+TILI G C + EA+S +M+ + K
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
SS+L K G EA N + G S +VV
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVV 522
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 162/359 (45%), Gaps = 8/359 (2%)
Query: 39 FLIKELTQRGSIEHCN-LVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQ 97
FL+ ++G + L+ Q + + N + N +++L +R++ A LF E
Sbjct: 143 FLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKL----DRVEDAMKLFDEHL 198
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
++ D +T+N LI G+ A+ ++ M P TYN LI S
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 158 EALNVCKKMTDNGV-GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+A + K + V PD+VT+ ++S + + +A S + M I P T N++
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+ K + A +I M C PDVV++TS+I Y GQ+ + M A
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMIS--FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G+ P+ +Y+ L+ A +A + ++ P Y +++ + ++ K +A
Sbjct: 377 GMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+ E +++ K KP+ +++ LI + G + +A+ I +M G P+ +++ +LL+
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 134/269 (49%), Gaps = 5/269 (1%)
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
I+ S +YN L + G+ A +F +K +G P+ L++++ K A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL-AA 396
+ +++ +++ + N+L++ ++DA+K+ E + + + L+
Sbjct: 159 AL--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI-KA 455
CG + +E +L G + + V YN+ I + E +KA ++K ++ +
Sbjct: 217 CGVGKAEKALE-LLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
D VTYT +ISG CK K EA S +++M+ L + + ++ ++ Y+K G+++ AE
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
M S GC PDVVT+TS++D Y G+++
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 145/369 (39%), Gaps = 40/369 (10%)
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
T+N+L + + A FE MK + P+ L ++ + + A +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
E + C + S+++ ++E+ F+ L ++N L+ G
Sbjct: 165 FEVEGCC----MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL-KPNLVSY 355
++AL + + G PDIV+Y +L+ + +S + KA +F+ +K + P++V+Y
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
++I Y G + +A +L +M + GI P
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPT----------------------------- 311
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
V +N + Y GE A + M D VT+T LI G C++ + +
Sbjct: 312 ------NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
EEM + + YS ++ A + ++++A + S P Y ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 536 AYTAAGKMN 544
+ AGK+N
Sbjct: 426 GFCKAGKVN 434
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN +I + ++++A + EM++ +CKPD T+ LI H G+ A++I M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALN---VCKKMTDNGVGP-DLVTHNILLSA 184
+ P + T ++L++ +G KEA + + +K N V P + T N L+A
Sbjct: 479 VAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTANATLAA 535
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 202/447 (45%), Gaps = 10/447 (2%)
Query: 41 IKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWR 100
I L + G I++ VF M++ +Y + YN I + R +R + A ++++M+
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHS-SYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMG 74
Query: 101 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 160
TY+ I+ + ++ ++ DM P +N ++ A+
Sbjct: 75 FSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAV 134
Query: 161 NVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
M G PD+V++ IL++ + + A+ + M + + PD ++ L
Sbjct: 135 QTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL 194
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
R+ D A ++ + K + V Y ++I + +G+IE EA + M G +P
Sbjct: 195 CHARKVDLAYEMV-AEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEP 253
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
+V+YN L+ Y + M K A V E+ ++G + D SY LL + R P K
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF- 312
Query: 341 EMIKRNKLKP----NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
M+K +++P ++VSY+ LI+ + A ++ EM Q G+ NVV+ +L+ A
Sbjct: 313 -MVK--EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKA 369
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
R + +L G+ + + Y + + G DKA G++ M + +I D
Sbjct: 370 FLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPD 429
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEM 483
+++Y LISG C+ + EA+ E+M
Sbjct: 430 AISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 199/447 (44%), Gaps = 5/447 (1%)
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
Y + I ++G A+ + D+M ++ YN I ++ A + M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 168 DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 227
G T++ +S ++ + M+ PD N+ + L + +
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
A+ F M ++ E PDVVSYT +I+ +G++ + +N M+ G+ P + A
Sbjct: 132 FAVQTFFCMVQRGRE--PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 288 LV-GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
LV G A + +V EIK + V Y +L++ + ++ + +KA + + +
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
+P+LV+YN L++ Y N +L A ++ EM + GIQ + S LL R S K
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 407 -ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
++ + RG + V+Y++ I ++ KA L++ MR+K + + VTYT LI
Sbjct: 310 YNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 466 GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
+ A +++M L L + Y++IL K G + +A FN M +P
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 526 DVVTYTSMLDAYTAAGKMNFEPLKYED 552
D ++Y S++ +G++ +ED
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFED 455
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 26 NRWVGRFARKNFP-----FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLH 80
N+ + R R + P F++KE+ RG C++V Y+ +I
Sbjct: 294 NQLLKRHCRVSHPDKCYNFMVKEMEPRG---FCDVV---------------SYSTLIETF 335
Query: 81 ARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR 140
R + +A LF EM++ + TY +LI A R G A ++D M + P R
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
Y +++ SGN +A V M ++ + PD +++N L+S + ++A+ FE
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDV 247
MKG PD T +I L++ ++ A +++ M +K DV
Sbjct: 456 MKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDV 502
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 145/368 (39%), Gaps = 77/368 (20%)
Query: 248 VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
++Y S I SG I+N F+ M + YN +G + A ++ +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 308 IKQNGFR-----------------------------------PDIVSYTSLLNAYGRSQK 332
+K GF PDI ++ L+ R K
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 333 PQKA-RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
A + F M++R + +P++VSY LI+ G + DA++I M + G+ P+ +
Sbjct: 130 VGFAVQTFFCMVQRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 392 TLLAACGRC-SQKGKIETVLSAAQMRG--IKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
L+ G C ++K + + A +++ +KL+TV YN+ I + G +KA L M
Sbjct: 189 ALVV--GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 449 RKKKIKADSVTYTILI---------------------SG--------------SCKMSKY 473
K + D VTY +L+ SG C++S
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHP 306
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
+ +FM + M + YS+++ + + +A F M+ G +VVTYTS+
Sbjct: 307 DKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 534 LDAYTAAG 541
+ A+ G
Sbjct: 367 IKAFLREG 374
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 175/352 (49%), Gaps = 8/352 (2%)
Query: 165 KMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
KM G+ PD+VT + L++ F + A+ M+ I+ D I+I L K R
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS 284
A+++ M+++ P+VV+Y+S+I SG++ + E + M ++ I P++++
Sbjct: 63 LVVPALEVLKRMKDRG--ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
++AL+ AYA G + V+ + Q P++ +Y+SL+ + +A + +++
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
PN+V+Y+ L + + + +DD IK+L +M Q G+ N VS TL+ Q G
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY---FQAG 237
Query: 405 KIETVLSA---AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
KI+ L G+ N +YN + GE +KAL ++ M+K + D +TYT
Sbjct: 238 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 297
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
I+I G CK EA ++ ++ + Y+ ++ ++ G EA++
Sbjct: 298 IMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 349
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 142/333 (42%), Gaps = 35/333 (10%)
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
PD+V+ +S+++ + +S I++ M GIK +V L+ + + AL
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
V +K G P++V+Y+SL+ +S + A + K+ PN+++++ALIDAY
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 364 SNGLL-----------------------------------DDAIKILREMEQDGIQPNVV 388
G L D+AIK+L M G PNVV
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
+ TL + S+ +L RG+ NTV+ N+ I Y G+ D ALG++ M
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 449 RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQI 508
+ + +Y I+++G + +ALS E M + + Y+ ++ K +
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309
Query: 509 VEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
EA F +K PD YT M+ AG
Sbjct: 310 KEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 138/279 (49%)
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
M+ GI+P IV+ ++LV + K+A+ V ++++ G + D+V T L++ +++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
A V + +K + PN+V+Y++LI +G L DA + L EM+ I PNV++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
L+ A + + K+++V I N Y+S I D+A+ + M K
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
+ VTY+ L +G K S+ + + +++M + + ++++ Y + G+I A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
F M S+G P++ +Y +L A G++ ++E
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 282
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 150/320 (46%), Gaps = 2/320 (0%)
Query: 84 NRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTY 143
N I A + +M++ K D LI+ + A+ ++ M I P+ TY
Sbjct: 27 NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTY 86
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
++LI SG +A +M + P+++T + L+ A+ + SK S +++M
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI 263
I P+ T + +I+ L + D+AI + + M K C P+VV+Y+++ + + S ++
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG--CTPNVVTYSTLANGFFKSSRV 204
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
++ + M G+ + VS N L+ Y G AL VF + NG P+I SY +
Sbjct: 205 DDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIV 264
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
L + + +KA FE +++ + ++++Y +I ++ +A + +++ +
Sbjct: 265 LAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRV 324
Query: 384 QPNVVSICTLLAACGRCSQK 403
+P+ + ++A R +
Sbjct: 325 EPDFKAYTIMIAELNRAGMR 344
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F LI +RG + + V++ M Q + Y+ +I HNR+D+A + M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMI-QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
C P+ TY+ L N ++ + + ++DDM + + + + N LI +G
Sbjct: 180 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
AL V MT NG+ P++ ++NI+L+ + + KALS FE M+ T D T I+
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 299
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII 254
IH + K +A D+F ++ K+ E PD +YT +I
Sbjct: 300 IHGMCKACMVKEAYDLFYKLKFKRVE--PDFKAYTIMI 335
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 129/286 (45%), Gaps = 6/286 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y+ +I + R+ A EM + P+ T++ALI+A+ + G+ ++ M+
Sbjct: 86 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 145
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ +I P+ TY++LI EA+ + M G P++VT++ L + F S+
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+ + M + +T + N +I + + D A+ +F M + P++ SY
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS--NGLIPNIRSYNI 263
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
++ +G++E + F M I++Y ++ M KEA +F ++K
Sbjct: 264 VLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKR 323
Query: 313 FRPDIVSYTSL---LNAYG-RSQKPQKARGVFEMIKRNKLKPNLVS 354
PD +YT + LN G R++ R + +++N+ P VS
Sbjct: 324 VEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQNESAPAEVS 369
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 189/426 (44%), Gaps = 53/426 (12%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
I +++++ + + + +A F E ++ D YN +A + G+ A ++ +M
Sbjct: 355 IVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM 414
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
I P Y LI+ G +AL++ +M NG+ PDL+T+N+L+S
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV--- 248
+ L +E MK +P+ T +++I L R+ +A D F+S+ +K E V
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGY 534
Query: 249 --------SYTSIIHL---------------YSVSGQIENCEAAFNMMLAEGIKPSIVSY 285
+Y + + L + G +E M A ++P
Sbjct: 535 CEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMC 594
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
++GA+ +EA ++F+ + + G PD+ +YT +++ Y R + QKA +FE +K+
Sbjct: 595 GKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQ 654
Query: 346 NKLKPNLVSYNALIDAY--------------GSNGLLDDAIKILREMEQDGIQPNVVSIC 391
+KP++V+Y L+D Y G G A ++LRE GI +VV
Sbjct: 655 RGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG-KRKASEVLREFSAAGIGLDVVCYT 713
Query: 392 TLLAACGRCSQKGKIETVLSAAQM------RGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
L+ ++ K+ + AA++ G++ + VAY + I SY G D A+ L
Sbjct: 714 VLI------DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLV 767
Query: 446 KSMRKK 451
+ KK
Sbjct: 768 TELSKK 773
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/586 (20%), Positives = 238/586 (40%), Gaps = 90/586 (15%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQE 98
FL+ +T+ G I +F+ +K Q CA Y ++++ R +++A L E +
Sbjct: 186 FLMNRMTEFGKIGMLMTLFKQLK-QLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENE- 243
Query: 99 WRCKPDAETYNALINAHGRAGQWRWAMNIM----------DDMLRAAIPPSRSTYNN--- 145
Y IN G+ A+ ++ D LRA + + N
Sbjct: 244 -----SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMK 298
Query: 146 -------------------------LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI 180
+I+ + N EAL KM G+ + V ++
Sbjct: 299 MKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSL 358
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
+L + +AL F+ + +I D N+ L KL + ++A ++ M+++
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
PDV++YT++I Y + G++ + + M+ G+ P +++YN LV A +G +E
Sbjct: 419 --IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEE 476
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS------ 354
L ++ +K G +P+ V+ + ++ ++K ++A F +++ K N S
Sbjct: 477 VLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ-KCPENKASFVKGYC 535
Query: 355 -----------------------YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
Y L + G L+ A +L++M ++P
Sbjct: 536 EAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCG 595
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
++ A + + + + + RG+ + Y I +Y + E KA L++ M+++
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 452 KIKADSVTYTILISGSCKM--------SKYGE-----ALSFMEEMMHLKLPVSKEVYSSI 498
IK D VTYT+L+ K+ S GE A + E + + Y+ +
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVL 715
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ K + +A F+ M SG PD+V YT+++ +Y G ++
Sbjct: 716 IDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYID 761
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 156/370 (42%), Gaps = 54/370 (14%)
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
++ V L +D+A D+ + K+ +C D+ + +++ + G+I F +
Sbjct: 152 LVKAYVSLGMFDEATDVL--FQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQ 209
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEA--LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
G+ + +Y +V A G +EA LL+ NE + Y + +N + +
Sbjct: 210 LGLCANEYTYAIVVKALCRKGNLEEAAMLLIENE--------SVFGYKTFINGLCVTGET 261
Query: 334 QKA------------------RGVFEMIKR---NKLKP-----------------NLVSY 355
+KA R V M+ R N++K ++ +
Sbjct: 262 EKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYAC 321
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
A+ID Y N L +A+ L +M G++ N V I +L+ C C +E + +
Sbjct: 322 LAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCV-IVSLILQC-YCKMDMCLEALEKFKEF 379
Query: 416 R--GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
R I L+ V YN A + +G ++A L + M+ + I D + YT LI G C K
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
+AL ++EM+ + Y+ ++ ++ G E + MK+ G P+ VT + +
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 534 LDAYTAAGKM 543
++ A K+
Sbjct: 500 IEGLCFARKV 509
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 143/359 (39%), Gaps = 54/359 (15%)
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQ-----------IENCEAAFNMM--------LAEGIK 279
K+ P+V +Y +++ + + G I+N E F +M AE K
Sbjct: 81 KEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIGEQAEEKK 140
Query: 280 PSIVSYN---ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
S V ALV AY + GM EA V + K+ DI + L+N K
Sbjct: 141 RSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGML 200
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD-GIQPNVVSICTL-- 393
+F+ +K+ L N +Y ++ A G L++A +L E E G + + +C
Sbjct: 201 MTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGE 260
Query: 394 ---------------------------LAACGRCSQ--KGKIETVLSAAQMRGIKLNTVA 424
+ G C++ E+V+ + G L+ A
Sbjct: 261 TEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYA 320
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
+ I Y +ALG M K +K + V ++++ CKM EAL +E
Sbjct: 321 CLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFR 380
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ + + + Y+ A SK G++ EA MK G PDV+ YT+++D Y GK+
Sbjct: 381 DMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 222/481 (46%), Gaps = 18/481 (3%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQW-MKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
FP +++ G +E ++ +K + C R + N ++ ++A+ +D A F
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR--VSNSILAVYAKCGELDFATKFFRR 241
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
M+E D +N+++ A+ + G+ A+ ++ +M + I P T+N LI G
Sbjct: 242 MRE----RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
A+++ +KM G+ D+ T ++S +AL F M + P+ T+
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
+ L+ ++ ++ +S+ K DV+ S++ +YS G++E+ F+ +
Sbjct: 358 AVSACSCLKVINQGSEV-HSIAVKMGFID-DVLVGNSLVDMYSKCGKLEDARKVFDSVKN 415
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+ + ++N+++ Y G +A +F ++ RP+I+++ ++++ Y ++ +
Sbjct: 416 K----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 336 ARGVFE-MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
A +F+ M K K++ N ++N +I Y NG D+A+++ R+M+ PN V+I +LL
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 395 AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
AC + + R + N+ +Y G+ + + ++ M K
Sbjct: 532 PACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK--- 588
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
D +T+ LI G YG AL+ +M + ++ SSI+ A+ G + E +
Sbjct: 589 -DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Query: 515 F 515
F
Sbjct: 648 F 648
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 196/458 (42%), Gaps = 31/458 (6%)
Query: 85 RIDQAR-GLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTY 143
RI AR GLF E PD L++ + + G A + D M + T+
Sbjct: 101 RILHARFGLFTE-------PDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTW 149
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGP-DLVTHNILLSAFKSGSQYSKALSYFELMK 202
+ +I A W+E + + M +GV P D + IL G + + + ++K
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK 209
Query: 203 ---GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
+ +R + L + C + D A F MRE+ DV+++ S++ Y
Sbjct: 210 LGMSSCLRVSNSILAVYAKC----GELDFATKFFRRMRER------DVIAWNSVLLAYCQ 259
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
+G+ E M EGI P +V++N L+G Y G A+ + +++ G D+ +
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
+T++++ + +A +F + + PN V+ + + A +++ ++
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+ G +V+ +L+ +C + V + + + + +NS I Y G
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGYCG 435
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM-MHLKLPVSKEVYSSI 498
KA L+ M+ ++ + +T+ +ISG K GEA+ + M K+ + ++ I
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
+ Y + G+ EA F M+ S P+ VT S+L A
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 163/343 (47%), Gaps = 18/343 (5%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N ++ ++++ +++ AR +F ++ D T+N++I + +AG A + M
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQD 446
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG-VGPDLVTHNILLSAFKSGSQYS 192
A + P+ T+N +I+ +G+ EA+++ ++M +G V + T N++++ + +
Sbjct: 447 ANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKD 506
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+AL F M+ + P++ T+ ++ L +I + + + V + +
Sbjct: 507 EALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN--A 564
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+ Y+ SG IE F M + I+++N+L+G Y HG AL +FN++K G
Sbjct: 565 LTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAYGSNGLLDDA 371
P+ + +S++ A+G + + VF I + + P L +A++ YG L++A
Sbjct: 621 ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEA 680
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
++ ++EM P S T C G I+ + AA+
Sbjct: 681 LQFIQEMNIQSETPIWESFLT------GCRIHGDIDMAIHAAE 717
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 192/457 (42%), Gaps = 41/457 (8%)
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN-------------WKE----- 158
R G A +D + + RSTY L+ +C SG+ + E
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFV 117
Query: 159 ------------ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
+ +K+ D+ +L T + ++ A+ +++ + F LM +
Sbjct: 118 ETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
PD ++ + A + +S+ K VS SI+ +Y+ G+++
Sbjct: 178 LPDDFLFPKILQGCANCGDVE-AGKVIHSVVIKLGMSSCLRVS-NSILAVYAKCGELDFA 235
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
F M + ++++N+++ AY +G +EA+ + E+++ G P +V++ L+
Sbjct: 236 TKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 327 YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
Y + K A + + ++ + ++ ++ A+I NG+ A+ + R+M G+ PN
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 387 VVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYK 446
V+I + ++AC + V S A G + + NS + Y G+ + A ++
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQG 506
S++ K D T+ +I+G C+ G+A M L + +++++ Y K G
Sbjct: 412 SVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 507 QIVEAESTFNLMKSSG-CSPDVVTYTSMLDAYTAAGK 542
EA F M+ G + T+ ++ Y GK
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 140/323 (43%), Gaps = 16/323 (4%)
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
PDV T ++ +Y+ G I + F+ M ++ +++A++GAY+ +E
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAK 167
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+F + ++G PD + +L + + + ++ + + L N+++ Y
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 364 SNGLLDDAIKILREM-EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
G LD A K R M E+D I N V LLA C + +E V + GI
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSV----LLAYCQNGKHEEAVELV-KEMEKEGISPGL 282
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
V +N IG Y +G+ D A+ L + M I AD T+T +ISG +AL +
Sbjct: 283 VTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRK 342
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
M + + S + A S I + ++ G DV+ S++D Y+ GK
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 543 MN-----FEPLKYEDGF-WKCML 559
+ F+ +K +D + W M+
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMI 425
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 188/385 (48%), Gaps = 19/385 (4%)
Query: 165 KMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
++ D G ++ NIL++ F S A F+ + ++P + N +I+ K+
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS 284
D+ + + M +KS PDV +Y+++I+ +++ F+ M G+ P+ V
Sbjct: 290 NLDEGFRLKHQM--EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 285 YNALVGAYAAHG---MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+ L+ ++ +G + KE+ + ++ G +PDIV Y +L+N + ++ AR + +
Sbjct: 348 FTTLIHGHSRNGEIDLMKES---YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ R L+P+ ++Y LID + G ++ A++I +EM+Q+GI+ + V L+ CG C
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV--CGMCK 462
Query: 402 QKGKIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
+ I+ + +M GIK + V Y + ++ G+ L K M+ VT
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
Y +L++G CK+ + A ++ M+++ + Y+++L +G A S+ ++
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL-----EGHHRHANSSKRYIQ 577
Query: 520 SS--GCSPDVVTYTSMLDAYTAAGK 542
G D+ +Y S+++ A K
Sbjct: 578 KPEIGIVADLASYKSIVNELDRASK 602
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 153/301 (50%), Gaps = 6/301 (1%)
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
+V + +++ + G I + + F+ + ++P++VS+N L+ Y G E +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
++++++ RPD+ +Y++L+NA + K A G+F+ + + L PN V + LI + N
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
G +D + ++M G+QP++V TL+ + ++ RG++ + + Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMH 485
+ I + G+ + AL + K M + I+ D V ++ L+ G CK + +A + EM+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 486 LKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK---SSGCSPDVVTYTSMLDAYTAAGK 542
+ Y+ ++ A+ K+G +A++ F L+K S G P VVTY +L+ G+
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKG---DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 543 M 543
M
Sbjct: 536 M 536
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 176/379 (46%), Gaps = 43/379 (11%)
Query: 91 GLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINAC 150
G + E+ + + +N L+N + G A + D++ + ++ P+ ++N LIN
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285
Query: 151 GSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDT 210
GN E + +M + PD+ T++ L++A
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA-------------------------- 319
Query: 211 TTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF 270
L K + D A +F+ M K P+ V +T++IH +S +G+I+ + ++
Sbjct: 320 ---------LCKENKMDGAHGLFDEM--CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
ML++G++P IV YN LV + +G A + + + + G RPD ++YT+L++ + R
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
+ A + + + +N ++ + V ++AL+ G + DA + LREM + GI+P+ V+
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 391 CTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
++ A +KG +T +L Q G + V YN + +G+ A L +
Sbjct: 489 TMMMDA---FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 448 MRKKKIKADSVTYTILISG 466
M + D +TY L+ G
Sbjct: 546 MLNIGVVPDDITYNTLLEG 564
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 152/326 (46%), Gaps = 3/326 (0%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F L+ + + G+I VF + +R+ +N +I + + +D+ L +M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEI-TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
++ R +PD TY+ALINA + + A + D+M + + P+ + LI+ +G
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+KM G+ PD+V +N L++ F A + + M +RPD T +
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
I + + A++I M + E D V +++++ G++ + E A ML
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIEL--DRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
GIKP V+Y ++ A+ G + + E++ +G P +V+Y LLN + + + A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAY 362
+ + + + P+ ++YN L++ +
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGH 565
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 10/300 (3%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI L + ++ + +F M +R + I+ +I H+R+ ID + + +M
Sbjct: 316 LINALCKENKMDGAHGLFDEM-CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
+PD YN L+N + G A NI+D M+R + P + TY LI+ G+ + A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
L + K+M NG+ D V + L+ K G + E+++ I+PD T +++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG-IKPDDVTYTMMMD 493
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECH-PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
K F ++E +S+ H P VV+Y +++ GQ++N + + ML G
Sbjct: 494 AFCKKGDAQTG---FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+ P ++YN L+ + H + + EI G D+ SY S++N R+ K + R
Sbjct: 551 VVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLASYKSIVNELDRASKDHRNR 607
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 146/334 (43%), Gaps = 2/334 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
++N+++ + I A+ +F E+ + +P ++N LIN + + G + M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
++ P TY+ LINA A + +M G+ P+ V L+ +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
++ M ++PD N +++ K A +I + M + PD ++YT
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG--LRPDKITYT 419
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++I + G +E M GI+ V ++ALV G +A E+ +
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G +PD V+YT +++A+ + Q + + ++ + P++V+YN L++ G + +A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
+L M G+ P+ ++ TLL R + K
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 17/259 (6%)
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY-------------- 355
Q GFR + +Y L + +A+ + E++ K K + S
Sbjct: 111 QPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCG 170
Query: 356 ---NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
+AL+ Y G + DAI+ R + + LL + + G I
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
G LN +N + + G A ++ + K+ ++ V++ LI+G CK+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
E +M + YS+++ A K+ ++ A F+ M G P+ V +T+
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 533 MLDAYTAAGKMNFEPLKYE 551
++ ++ G+++ Y+
Sbjct: 351 LIHGHSRNGEIDLMKESYQ 369
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 202/463 (43%), Gaps = 5/463 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+++++I R +++ A L +++ ++ P +L+ R A ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
L + + + I S G + + + M G+ PD+V + +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A S +K I D+ +++ VI K+ + ++AI + +S R + P++ Y+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-----PNIFVYS 377
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
S + +G + F + G+ P V Y ++ Y G +A F + ++
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G P + + T L+ A R A VF +K LK ++V+YN L+ YG L+
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+++ EM GI P+V + L+ + + ++S RG +T+A+ IG
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
+ G++ +A L+ M ++K D VT + L+ G CK + +A+ +++ L
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 492 KEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+Y++++ Y G I +A LM G P+ T+ +++
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 184/433 (42%), Gaps = 17/433 (3%)
Query: 118 AGQWRWAMNIMDDMLRAAIPPS--RSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
+G+ R +M D+ I + ++ LI+ C AL + K+ G+ P
Sbjct: 177 SGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFP-- 234
Query: 176 VTHNILLSAFKS-----GSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
+ + +S K G + ++ L +G H+ +L I +C +DK
Sbjct: 235 -SRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYC--SDGYFDKGW 291
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
++ M K PD+V++T I +G ++ + + GI VS ++++
Sbjct: 292 ELLMGM--KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVID 349
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
+ G +EA+ + + + RP+I Y+S L+ + +A +F+ I L P
Sbjct: 350 GFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
+ V Y +ID Y + G D A + + + G P++ + L+ AC R E+V
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+ G+KL+ V YN+ + Y + +K L MR I D TY ILI
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
EA + E++ S ++ ++ +SK+G EA + M PDVVT
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 531 TSMLDAYTAAGKM 543
+++L Y A +M
Sbjct: 587 SALLHGYCKAQRM 599
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 188/437 (43%), Gaps = 5/437 (1%)
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
++ LI+ R + A+ + + + I PSR +L+ + A + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
G + ++ + + S + K MK IRPD + I L K
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
+A + + K D VS +S+I + G+ E A ++ + ++P+I Y+
Sbjct: 323 KEATSVL--FKLKLFGISQDSVSVSSVIDGFCKVGKPEE---AIKLIHSFRLRPNIFVYS 377
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
+ + + G A +F EI + G PD V YT++++ Y + KA F + ++
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
P+L + LI A G + DA + R M+ +G++ +VV+ L+ G+ Q K+
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
++ + GI + YN I S + G D+A + + ++ ++ +T +I G
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
K + EA M L++ S++L Y K ++ +A FN + +G PD
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 527 VVTYTSMLDAYTAAGKM 543
VV Y +++ Y + G +
Sbjct: 618 VVLYNTLIHGYCSVGDI 634
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 172/395 (43%), Gaps = 5/395 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+ ++ IR + D+ L M+ + +PD + I+ +AG + A +++ +
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL 332
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
I + +++I+ G +EA+ + + P++ ++ LS S
Sbjct: 333 KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDM 389
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A + F+ + + PD +I L + DKA F ++ KS P + + T
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL--KSGNPPSLTTST 447
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+I S G I + E+ F M EG+K +V+YN L+ Y + + +E++
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G PD+ +Y L+++ +A + + R P+ +++ +I + G +A
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+ M ++P+VV+ LL + + K + + G+K + V YN+ I
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
Y +VG+ +KA L M ++ + + T+ L+ G
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+K ++P++V++ ID G L +A +L +++ GI + VS+ +++ G C +
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVID--GFC-K 353
Query: 403 KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
GK E + ++ N Y+S + + + G+ +A +++ + + + D V YT
Sbjct: 354 VGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 463 LISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
+I G C + + +A + ++ P S + ++ A S+ G I +AES F MK+ G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 523 CSPDVVTYTSMLDAYTAAGKMN 544
DVVTY +++ Y ++N
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLN 495
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 202/463 (43%), Gaps = 5/463 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+++++I R +++ A L +++ ++ P +L+ R A ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
L + + + I S G + + + M G+ PD+V + +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A S +K I D+ +++ VI K+ + ++AI + +S R + P++ Y+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-----PNIFVYS 377
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
S + +G + F + G+ P V Y ++ Y G +A F + ++
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G P + + T L+ A R A VF +K LK ++V+YN L+ YG L+
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+++ EM GI P+V + L+ + + ++S RG +T+A+ IG
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
+ G++ +A L+ M ++K D VT + L+ G CK + +A+ +++ L
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 492 KEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+Y++++ Y G I +A LM G P+ T+ +++
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 184/433 (42%), Gaps = 17/433 (3%)
Query: 118 AGQWRWAMNIMDDMLRAAIPPS--RSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
+G+ R +M D+ I + ++ LI+ C AL + K+ G+ P
Sbjct: 177 SGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFP-- 234
Query: 176 VTHNILLSAFKS-----GSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
+ + +S K G + ++ L +G H+ +L I +C +DK
Sbjct: 235 -SRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYC--SDGYFDKGW 291
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
++ M K PD+V++T I +G ++ + + GI VS ++++
Sbjct: 292 ELLMGM--KHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVID 349
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
+ G +EA+ + + + RP+I Y+S L+ + +A +F+ I L P
Sbjct: 350 GFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
+ V Y +ID Y + G D A + + + G P++ + L+ AC R E+V
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+ G+KL+ V YN+ + Y + +K L MR I D TY ILI
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
EA + E++ S ++ ++ +SK+G EA + M PDVVT
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 531 TSMLDAYTAAGKM 543
+++L Y A +M
Sbjct: 587 SALLHGYCKAQRM 599
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 188/437 (43%), Gaps = 5/437 (1%)
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
++ LI+ R + A+ + + + I PSR +L+ + A + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
G + ++ + + S + K MK IRPD + I L K
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
+A + + K D VS +S+I + G+ E A ++ + ++P+I Y+
Sbjct: 323 KEATSVL--FKLKLFGISQDSVSVSSVIDGFCKVGKPEE---AIKLIHSFRLRPNIFVYS 377
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
+ + + G A +F EI + G PD V YT++++ Y + KA F + ++
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
P+L + LI A G + DA + R M+ +G++ +VV+ L+ G+ Q K+
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
++ + GI + YN I S + G D+A + + ++ ++ +T +I G
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
K + EA M L++ S++L Y K ++ +A FN + +G PD
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 527 VVTYTSMLDAYTAAGKM 543
VV Y +++ Y + G +
Sbjct: 618 VVLYNTLIHGYCSVGDI 634
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 172/395 (43%), Gaps = 5/395 (1%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+ ++ IR + D+ L M+ + +PD + I+ +AG + A +++ +
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKL 332
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
I + +++I+ G +EA+ + + P++ ++ LS S
Sbjct: 333 KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDM 389
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+A + F+ + + PD +I L + DKA F ++ KS P + + T
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL--KSGNPPSLTTST 447
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+I S G I + E+ F M EG+K +V+YN L+ Y + + +E++
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G PD+ +Y L+++ +A + + R P+ +++ +I + G +A
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+ M ++P+VV+ LL + + K + + G+K + V YN+ I
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
Y +VG+ +KA L M ++ + + T+ L+ G
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+K ++P++V++ ID G L +A +L +++ GI + VS+ +++ G C +
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVID--GFC-K 353
Query: 403 KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
GK E + ++ N Y+S + + + G+ +A +++ + + + D V YT
Sbjct: 354 VGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 463 LISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
+I G C + + +A + ++ P S + ++ A S+ G I +AES F MK+ G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 523 CSPDVVTYTSMLDAYTAAGKMN 544
DVVTY +++ Y ++N
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLN 495
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 166/352 (47%), Gaps = 7/352 (1%)
Query: 117 RAGQWRWAMNIMDDMLRAA--IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD 174
+ +W+ A+ I + +LR P TY L G+ +A + + M G+ P
Sbjct: 120 KENRWQSALKIFN-LLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPT 178
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKG-THIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
+ + L+S + KA S E MK + +PD T ++I C KL ++D I
Sbjct: 179 IDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK-PSIVSYNALVGAY 292
M C V+Y +II Y +G E E+ M+ +G P + + N+++G+Y
Sbjct: 239 LEMSYLGVGCS--TVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY 296
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
++ ++ + G +PDI ++ L+ ++G++ +K V + +++
Sbjct: 297 GNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTT 356
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
V+YN +I+ +G G ++ + R+M+ G++PN ++ C+L+ A + KI++VL
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+ L+T +N I +Y G+ LY M ++K K D +T+ +I
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 163/360 (45%), Gaps = 39/360 (10%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+F ++ Q Y R Y + ++ + DQA LF M KP + Y +LI+ +
Sbjct: 130 IFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVY 189
Query: 116 GRA------------------------------------GQWRWAMNIMDDMLRAAIPPS 139
G++ G++ +I+ +M + S
Sbjct: 190 GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCS 249
Query: 140 RSTYNNLINACGSSGNWKEALNVCKKMTDNGVG-PDLVTHNILLSAFKSGSQYSKALSYF 198
TYN +I+ G +G ++E +V M ++G PD+ T N ++ ++ +G K S++
Sbjct: 250 TVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWY 309
Query: 199 ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYS 258
+ ++PD TT NI+I K Y K + + M +K V+Y +I +
Sbjct: 310 SRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM--EKRFFSLTTVTYNIVIETFG 367
Query: 259 VSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIV 318
+G+IE + F M +G+KP+ ++Y +LV AY+ G+ + V +I + D
Sbjct: 368 KAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTP 427
Query: 319 SYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+ ++NAYG++ + ++ ++ K KP+ +++ +I Y ++G+ D ++ ++M
Sbjct: 428 FFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 162/358 (45%), Gaps = 38/358 (10%)
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
+K ++ A+ IFN +R K+ P +YT + + Q + F +ML+EG+KP
Sbjct: 119 IKENRWQSALKIFNLLR-KQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKP 177
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQ-NGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
+I Y +L+ Y + +A +K + +PD+ ++T L++ + + + +
Sbjct: 178 TIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSI 237
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG----------------- 382
+ + + V+YN +ID YG G+ ++ +L +M +DG
Sbjct: 238 VLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYG 297
Query: 383 -------------------IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
+QP++ + L+ + G+ K+ +V+ + R L TV
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
YN I ++ G +K +++ M+ + +K +S+TY L++ K + S + ++
Sbjct: 358 TYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI 417
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++ + + ++ I+ AY + G + + + M+ C PD +T+ +M+ YTA G
Sbjct: 418 VNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 5/381 (1%)
Query: 82 RHNRIDQARGLF--FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPS 139
+ NR A +F Q W +P +TY L G Q A + + ML + P+
Sbjct: 120 KENRWQSALKIFNLLRKQHWY-EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPT 178
Query: 140 RSTYNNLINACGSSGNWKEALNVCKKMTD-NGVGPDLVTHNILLSAFKSGSQYSKALSYF 198
Y +LI+ G S +A + + M + PD+ T +L+S ++ S
Sbjct: 179 IDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 199 ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYS 258
M + T T N +I K +++ + M E + PDV + SII Y
Sbjct: 239 LEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIED-GDSLPDVCTLNSIIGSYG 297
Query: 259 VSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIV 318
+ E+ ++ G++P I ++N L+ ++ GM K+ V + +++ F V
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 319 SYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+Y ++ +G++ + +K VF +K +KPN ++Y +L++AY GL+ +LR++
Sbjct: 358 TYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI 417
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
+ + ++ A G+ ++ + + R K + + + + I +Y G +
Sbjct: 418 VNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIF 477
Query: 439 DKALGLYKSMRKKKIKADSVT 459
D L K M I +T
Sbjct: 478 DAVQELEKQMISSDIGKKRLT 498
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 25 LNRWVGRFAR-------KNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMI 77
+ W RF F LI + G + V +M+ +R + YN++I
Sbjct: 305 MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFME-KRFFSLTTVTYNIVI 363
Query: 78 RLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP 137
+ RI++ +F +M+ KP++ TY +L+NA+ +AG +++ ++ + +
Sbjct: 364 ETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVV 423
Query: 138 PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKS 187
+N +INA G +G+ + +M + PD +T ++ + +
Sbjct: 424 LDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTA 473
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 7/353 (1%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQE 98
L +EL + C VF+WM+ QR Y N +Y+ +I + + + A LF EM+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 99 WRCKPDAETYNALINAH----GRAGQWRWAMNIMDDMLR-AAIPPSRSTYNNLINACGSS 153
C+PDA YNALI AH +A +D M P+ TYN L+ A S
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
G + + K + + V PD+ T N ++ A+ + + M+ +PD T
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N++I K ++++K F S+ K + P + ++ S+I Y + I+ E F M
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEK--PTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
PS ++Y ++ Y G A +F E+ ++ + ++L Y R+
Sbjct: 340 NDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLY 399
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
+A +F ++ P+ +Y L AY + + ++++ME+DGI PN
Sbjct: 400 IEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 4/342 (1%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNG-VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
L G S W + L V + M PD ++ L+S Q A+ F MK +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK---SECHPDVVSYTSIIHLYSVSG 261
RPD + N +I + R KA++ +K C P+VV+Y ++ ++ SG
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+++ A F + + P + ++N ++ AY +GM KE V ++ N +PDI+++
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
L+++YG+ Q+ +K F+ + R+K KP L ++N++I YG ++D A + ++M
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
P+ ++ ++ G C + + L N+ + Y G Y +A
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
L+ + ++ D+ TY L K + M++M
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 22/339 (6%)
Query: 218 HCLVKLRQYDKA------IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN 271
HC + + K+ +++F M +K+ PD Y+ +I + GQ F+
Sbjct: 99 HCFLLFEELGKSDKWLQCLEVFRWM-QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFS 157
Query: 272 MMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI-----KQNGF---RPDIVSYTSL 323
M G +P YNAL+ AH ++ ++ K G +P++V+Y L
Sbjct: 158 EMKNSGCRPDASVYNALI---TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
L A+ +S K + +F+ + + + P++ ++N ++DAYG NG++ + +L M +
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 384 QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALG 443
+P++++ L+ + G+ + K+E + K +NS I +Y DKA
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 444 LYKSMRKKKIKADSVTYT--ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
++K M +TY I++ G C A EE+ + +++L
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEV 392
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
Y + G +EA+ F+ + PD TY + AYT A
Sbjct: 393 YCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 5/241 (2%)
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
KQ + PD Y+ L++ G+ + + A +F +K + +P+ YNALI A+
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 369 DDAIKILREM--EQDGI---QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
A++ +R + GI QPNVV+ LL A + + ++ + M + +
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
+N + +Y G + + MR + K D +T+ +LI K ++ + + +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
M K + ++S++ Y K I +AE F M P +TY M+ Y G +
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 544 N 544
+
Sbjct: 365 S 365
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 216/469 (46%), Gaps = 43/469 (9%)
Query: 104 DAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 163
D+ ++ L+ + +++ +++ DM + IPPS +++ ACG N + +
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH---IRPDTTTLNIVIHCL 220
+ NG+ + L+ YS+ L Y EL K +T + N ++H
Sbjct: 128 AQALKNGLCGCVYVQTGLVGL------YSR-LGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
++ + D+A +F+ + EK D VS+ II Y+ G + N + F+ M +
Sbjct: 181 LESGELDEARRVFDKIPEK------DAVSWNLIISSYAKKGDMGNACSLFSAMPLK---- 230
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQ-NGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
S S+N L+G Y K A F+ + Q NG VS+ ++++ Y + Q A +
Sbjct: 231 SPASWNILIGGYVNCREMKLARTYFDAMPQKNG-----VSWITMISGYTKLGDVQSAEEL 285
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG--IQPNVVSICTLLAAC 397
F ++ + K LV Y+A+I Y NG DA+K+ +M + IQP+ +++ ++++A
Sbjct: 286 FRLMSK---KDKLV-YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSAN 341
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ V S GIK++ + S I Y+ G++ KA ++ ++ KK D+
Sbjct: 342 SQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DT 397
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
V+Y+ +I G EA S M+ K+P + ++ +L AYS G + E FN
Sbjct: 398 VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNS 457
Query: 518 MKSSGCSPDVVTYTSMLDAYTAAGKMN--FE-----PLKYEDGFWKCML 559
MK P Y M+D AG++ +E P++ G W +L
Sbjct: 458 MKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 178/424 (41%), Gaps = 75/424 (17%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N ++ + +D+AR +F ++ E DA ++N +I+++ + G A ++
Sbjct: 173 WNSLLHGYLESGELDEARRVFDKIPE----KDAVSWNLIISSYAKKGDMGNACSLF---- 224
Query: 133 RAAIP-PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+A+P S +++N LI G N +E + + + D + V+ ++S +
Sbjct: 225 -SAMPLKSPASWNILI---GGYVNCRE-MKLARTYFDAMPQKNGVSWITMISGYTKLGDV 279
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A F LM + D + +I C + + A+ +F M E+ S PD ++ +
Sbjct: 280 QSAEELFRLMS----KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLS 335
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIK-------------------------------P 280
S++ S G + + GIK
Sbjct: 336 SVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK 395
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
VSY+A++ +GM EA +F + + P++V++T LL+AY S Q+ F
Sbjct: 396 DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCF 455
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG-- 398
+K + L+P+ Y ++D G G L++A ++++ M +QPN LL A G
Sbjct: 456 NSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP---MQPNAGVWGALLLASGLH 512
Query: 399 --------RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS-YLNVGEYDKALGLYKSMR 449
CS K+ET + Y S + Y +VG +D A + S++
Sbjct: 513 NNVEFGEIACSHCVKLET------------DPTGYLSHLAMIYSSVGRWDDARTVRDSIK 560
Query: 450 KKKI 453
+KK+
Sbjct: 561 EKKL 564
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Query: 64 RNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
R+ C N + YN +I + R N +++A +F +MQE CKPD TY LI+ H +AG
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
AM++ M + P TY+ +IN G +G+ A + +M D G P+LVT+NI++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE 242
Y AL + M+ PD T +IV+ L ++A +F M++K
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN-- 569
Query: 243 CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEAL 302
PD Y ++ L+ +G +E + ML G++P++ + N+L+ + EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 303 LVFNEIKQNGFRPDIVSYTSLLN--AYGRSQ 331
+ + G RP + +YT LL+ GRS+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 2/303 (0%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F W+K Q + Y M+ R + L EM C+P+ TYN LI+++G
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
RA AMN+ + M A P R TY LI+ +G A+++ ++M G+ PD
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
T++++++ A F M P+ T NI++ K R Y A+ ++ M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+ E PD V+Y+ ++ + G +E EA F M + P Y LV + G
Sbjct: 531 QNAGFE--PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYN 356
++A + + G RP++ + SLL+ + R K +A + + + L+P+L +Y
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 357 ALI 359
L+
Sbjct: 649 LLL 651
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 155/340 (45%), Gaps = 5/340 (1%)
Query: 185 FKSGSQYSKALSYFE-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
K + Y AL +F L + + D T ++ L + +Q+ + + M + C
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM--VRDGC 395
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
P+ V+Y +IH Y + + FN M G KP V+Y L+ +A G A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAY 362
++ ++ G PD +Y+ ++N G++ A +F EM+ + PNLV+YN ++D +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLH 514
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
+A+K+ R+M+ G +P+ V+ ++ G C + E V + Q + +
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
Y + + G +KA Y++M ++ + T L+S +++K EA ++
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
M+ L L S + Y+ +L + ++ LM S+G
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 4/269 (1%)
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G K +Y +VG + +E+ ++G +P+ V+Y L+++YGR+ +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
VF ++ KP+ V+Y LID + G LD A+ + + M+ G+ P+ + ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
G+ + +G N V YN + + Y AL LY+ M+ + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 457 SVTYTILIS--GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
VTY+I++ G C + EA+ EM + VY ++ + K G + +A
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ M +G P+V T S+L + K+
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Query: 359 IDAYGSNGLLD------DAIKILREME-QDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
IDAY +N +L +A+ ++ Q G + + + T++ GR Q G I +L
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
G + NTV YN I SY ++A+ ++ M++ K D VTY LI K
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYT 531
A+ + M L YS I+ K G + A F M GC+P++VTY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 532 SMLDAYTAA 540
M+D + A
Sbjct: 509 IMMDLHAKA 517
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM-RKKKIKADSVTYTILISGSCKM 470
A Q G++++ N + + +Y ALG + + R+ K D TYT ++ +
Sbjct: 321 ALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
++G ++EM+ + Y+ ++ +Y + + EA + FN M+ +GC PD VTY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 531 TSMLDAYTAAGKMNF 545
+++D + AG ++
Sbjct: 438 CTLIDIHAKAGFLDI 452
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Query: 64 RNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
R+ C N + YN +I + R N +++A +F +MQE CKPD TY LI+ H +AG
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
AM++ M + P TY+ +IN G +G+ A + +M D G P+LVT+NI++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE 242
Y AL + M+ PD T +IV+ L ++A +F M++K
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN-- 569
Query: 243 CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEAL 302
PD Y ++ L+ +G +E + ML G++P++ + N+L+ + EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 303 LVFNEIKQNGFRPDIVSYTSLLN--AYGRSQ 331
+ + G RP + +YT LL+ GRS+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 2/303 (0%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F W+K Q + Y M+ R + L EM C+P+ TYN LI+++G
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
RA AMN+ + M A P R TY LI+ +G A+++ ++M G+ PD
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
T++++++ A F M P+ T NI++ K R Y A+ ++ M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+ E PD V+Y+ ++ + G +E EA F M + P Y LV + G
Sbjct: 531 QNAGFE--PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYN 356
++A + + G RP++ + SLL+ + R K +A + + + L+P+L +Y
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 357 ALI 359
L+
Sbjct: 649 LLL 651
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 155/340 (45%), Gaps = 5/340 (1%)
Query: 185 FKSGSQYSKALSYFE-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
K + Y AL +F L + + D T ++ L + +Q+ + + M + C
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM--VRDGC 395
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
P+ V+Y +IH Y + + FN M G KP V+Y L+ +A G A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAY 362
++ ++ G PD +Y+ ++N G++ A +F EM+ + PNLV+YN ++D +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLH 514
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
+A+K+ R+M+ G +P+ V+ ++ G C + E V + Q + +
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
Y + + G +KA Y++M ++ + T L+S +++K EA ++
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
M+ L L S + Y+ +L + ++ LM S+G
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 4/269 (1%)
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G K +Y +VG + +E+ ++G +P+ V+Y L+++YGR+ +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
VF ++ KP+ V+Y LID + G LD A+ + + M+ G+ P+ + ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
G+ + +G N V YN + + Y AL LY+ M+ + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 457 SVTYTILIS--GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
VTY+I++ G C + EA+ EM + VY ++ + K G + +A
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ M +G P+V T S+L + K+
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Query: 359 IDAYGSNGLLD------DAIKILREME-QDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
IDAY +N +L +A+ ++ Q G + + + T++ GR Q G I +L
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
G + NTV YN I SY ++A+ ++ M++ K D VTY LI K
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYT 531
A+ + M L YS I+ K G + A F M GC+P++VTY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 532 SMLDAYTAA 540
M+D + A
Sbjct: 509 IMMDLHAKA 517
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM-RKKKIKADSVTYTILISGSCKM 470
A Q G++++ N + + +Y ALG + + R+ K D TYT ++ +
Sbjct: 321 ALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
++G ++EM+ + Y+ ++ +Y + + EA + FN M+ +GC PD VTY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 531 TSMLDAYTAAGKMNF 545
+++D + AG ++
Sbjct: 438 CTLIDIHAKAGFLDI 452
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Query: 64 RNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
R+ C N + YN +I + R N +++A +F +MQE CKPD TY LI+ H +AG
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
AM++ M + P TY+ +IN G +G+ A + +M D G P+LVT+NI++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE 242
Y AL + M+ PD T +IV+ L ++A +F M++K
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN-- 569
Query: 243 CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEAL 302
PD Y ++ L+ +G +E + ML G++P++ + N+L+ + EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 303 LVFNEIKQNGFRPDIVSYTSLLN--AYGRSQ 331
+ + G RP + +YT LL+ GRS+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 2/303 (0%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F W+K Q + Y M+ R + L EM C+P+ TYN LI+++G
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
RA AMN+ + M A P R TY LI+ +G A+++ ++M G+ PD
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
T++++++ A F M P+ T NI++ K R Y A+ ++ M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+ E PD V+Y+ ++ + G +E EA F M + P Y LV + G
Sbjct: 531 QNAGFE--PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYN 356
++A + + G RP++ + SLL+ + R K +A + + + L+P+L +Y
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 357 ALI 359
L+
Sbjct: 649 LLL 651
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 155/340 (45%), Gaps = 5/340 (1%)
Query: 185 FKSGSQYSKALSYFE-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
K + Y AL +F L + + D T ++ L + +Q+ + + M + C
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM--VRDGC 395
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
P+ V+Y +IH Y + + FN M G KP V+Y L+ +A G A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAY 362
++ ++ G PD +Y+ ++N G++ A +F EM+ + PNLV+YN ++D +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLH 514
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
+A+K+ R+M+ G +P+ V+ ++ G C + E V + Q + +
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
Y + + G +KA Y++M ++ + T L+S +++K EA ++
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
M+ L L S + Y+ +L + ++ LM S+G
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 4/269 (1%)
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G K +Y +VG + +E+ ++G +P+ V+Y L+++YGR+ +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
VF ++ KP+ V+Y LID + G LD A+ + + M+ G+ P+ + ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
G+ + +G N V YN + + Y AL LY+ M+ + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 457 SVTYTILIS--GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
VTY+I++ G C + EA+ EM + VY ++ + K G + +A
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ M +G P+V T S+L + K+
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Query: 359 IDAYGSNGLLD------DAIKILREME-QDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
IDAY +N +L +A+ ++ Q G + + + T++ GR Q G I +L
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
G + NTV YN I SY ++A+ ++ M++ K D VTY LI K
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYT 531
A+ + M L YS I+ K G + A F M GC+P++VTY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 532 SMLDAYTAA 540
M+D + A
Sbjct: 509 IMMDLHAKA 517
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM-RKKKIKADSVTYTILISGSCKM 470
A Q G++++ N + + +Y ALG + + R+ K D TYT ++ +
Sbjct: 321 ALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
++G ++EM+ + Y+ ++ +Y + + EA + FN M+ +GC PD VTY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 531 TSMLDAYTAAGKMNF 545
+++D + AG ++
Sbjct: 438 CTLIDIHAKAGFLDI 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 7/353 (1%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQE 98
L +EL + C VF+WM+ QR Y N +Y+ +I + + + A LF EM+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 99 WRCKPDAETYNALINAH----GRAGQWRWAMNIMDDMLR-AAIPPSRSTYNNLINACGSS 153
C+PDA YNALI AH +A +D M P+ TYN L+ A S
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
G + + K + + V PD+ T N ++ A+ + + M+ +PD T
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N++I K ++++K F S+ K + P + ++ S+I Y + I+ E F M
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEK--PTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
PS ++Y ++ Y G A +F E+ ++ + ++L Y R+
Sbjct: 340 NDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLY 399
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
+A +F ++ P+ +Y L AY + + ++++ME+DGI PN
Sbjct: 400 IEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 4/342 (1%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNG-VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
L G S W + L V + M PD ++ L+S Q A+ F MK +
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK---SECHPDVVSYTSIIHLYSVSG 261
RPD + N +I + R KA++ +K C P+VV+Y ++ ++ SG
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+++ A F + + P + ++N ++ AY +GM KE V ++ N +PDI+++
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
L+++YG+ Q+ +K F+ + R+K KP L ++N++I YG ++D A + ++M
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
P+ ++ ++ G C + + L N+ + Y G Y +A
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
L+ + ++ D+ TY L K + M++M
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 22/339 (6%)
Query: 218 HCLVKLRQYDKA------IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN 271
HC + + K+ +++F M +K+ PD Y+ +I + GQ F+
Sbjct: 99 HCFLLFEELGKSDKWLQCLEVFRWM-QKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFS 157
Query: 272 MMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI-----KQNGF---RPDIVSYTSL 323
M G +P YNAL+ AH ++ ++ K G +P++V+Y L
Sbjct: 158 EMKNSGCRPDASVYNALI---TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
L A+ +S K + +F+ + + + P++ ++N ++DAYG NG++ + +L M +
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 384 QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALG 443
+P++++ L+ + G+ + K+E + K +NS I +Y DKA
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 444 LYKSMRKKKIKADSVTYT--ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
++K M +TY I++ G C A EE+ + +++L
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEV 392
Query: 502 YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
Y + G +EA+ F+ + PD TY + AYT A
Sbjct: 393 YCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 5/238 (2%)
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
KQ + PD Y+ L++ G+ + + A +F +K + +P+ YNALI A+
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 369 DDAIKILREM--EQDGI---QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
A++ +R + GI QPNVV+ LL A + + ++ + M + +
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
+N + +Y G + + MR + K D +T+ +LI K ++ + + +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
M K + ++S++ Y K I +AE F M P +TY M+ Y G
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 141/303 (46%), Gaps = 2/303 (0%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F W+K Q + Y M+ R + + L EM CKP+ TYN LI+++G
Sbjct: 346 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYG 405
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
RA + AMN+ + M A P R TY LI+ +G A+++ ++M + G+ PD
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTF 465
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
T++++++ A F M G P+ T NI+I K R Y+ A+ ++ M
Sbjct: 466 TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+ + PD V+Y+ ++ + G +E E F M + P Y LV + G
Sbjct: 526 --QNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYN 356
+A + + Q G RP++ + SLL+ + R + +A + + + L P+L +Y
Sbjct: 584 NVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYT 643
Query: 357 ALI 359
L+
Sbjct: 644 LLL 646
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 3/263 (1%)
Query: 64 RNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
R+ C N + YN +I + R N + +A +F +MQE C+PD TY LI+ H +AG
Sbjct: 387 RDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLD 446
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
AM++ M A + P TY+ +IN G +G+ A + +M G P+LVT NI++
Sbjct: 447 IAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE 242
+ Y AL + M+ +PD T +IV+ L ++A +F M+ K
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN-- 564
Query: 243 CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEAL 302
PD Y ++ L+ +G ++ + ML G++P++ + N+L+ + EA
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 303 LVFNEIKQNGFRPDIVSYTSLLN 325
+ + G P + +YT LL+
Sbjct: 625 NLLQSMLALGLHPSLQTYTLLLS 647
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 156/335 (46%), Gaps = 11/335 (3%)
Query: 185 FKSGSQYSKALSYFELMK-GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
K Y+ AL +F +K + D T ++ L + +Q+ + + + M + C
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEM--VRDGC 390
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
P+ V+Y +IH Y + ++ FN M G +P V+Y L+ +A G A+
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAY 362
++ +++ G PD +Y+ ++N G++ A +F EM+ + PNLV++N +I +
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG-CTPNLVTFNIMIALH 509
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
+ A+K+ R+M+ G QP+ V+ ++ G C + E V + Q + +
Sbjct: 510 AKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
Y + + G DKA Y++M + ++ + T L+S ++ + EA + ++
Sbjct: 570 PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQS 629
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
M+ L L S + Y+ +L +A S F++
Sbjct: 630 MLALGLHPSLQTYTLLLSC------CTDARSNFDM 658
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G K +Y +VG E + +E+ ++G +P+ V+Y L+++YGR+ ++A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
VF ++ +P+ V+Y LID + G LD A+ + + M++ G+ P+ + ++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
G+ + +G N V +N I + Y+ AL LY+ M+ + D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 457 SVTYTILIS--GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
VTY+I++ G C + EA EM + VY ++ + K G + +A
Sbjct: 534 KVTYSIVMEVLGHCGFLE--EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ M +G P+V T S+L + +M+
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMS 621
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 145/315 (46%), Gaps = 3/315 (0%)
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
G D T+ ++ Q+ + + M +P+T T N +IH + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
+++FN M+E + C PD V+Y ++I +++ +G ++ + M G+ P +Y+ ++
Sbjct: 414 MNVFNQMQE--AGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK 349
G A +F E+ G P++V++ ++ + +++ + A ++ ++ +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 350 PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETV 409
P+ V+Y+ +++ G G L++A + EM++ P+ L+ G+ K
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 410 LSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
A G++ N NS + ++L V +A L +SM + TYT+L+S C
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCT 650
Query: 470 MSKYGEALSFMEEMM 484
++ + F ++M
Sbjct: 651 DARSNFDMGFCGQLM 665
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%)
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
+Q GF+ D +YT+++ GR+++ + + + + R+ KPN V+YN LI +YG L
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+A+ + +M++ G +P+ V+ CTL+ + + Q G+ +T Y+
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I G A L+ M + + VT+ I+I+ K Y AL +M +
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
K YS ++ G + EAE F M+ PD Y ++D + AG ++
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVD 586
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 7/196 (3%)
Query: 352 LVSYNALIDAYGSNGLLD------DAIKILREME-QDGIQPNVVSICTLLAACGRCSQKG 404
L ++ +DAY +N +L +A+ ++ Q G + + + T++ GR Q G
Sbjct: 317 LHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 376
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+I +L G K NTV YN I SY +A+ ++ M++ + D VTY LI
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
K A+ + M L YS I+ K G + A F M GC+
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 525 PDVVTYTSMLDAYTAA 540
P++VT+ M+ + A
Sbjct: 497 PNLVTFNIMIALHAKA 512
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFE 95
+ +I L + G + + +F M Q C N + +N+MI LHA+ + A L+ +
Sbjct: 467 YSVIINCLGKAGHLPAAHRLFCEMVGQG--CTPNLVTFNIMIALHAKARNYETALKLYRD 524
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
MQ +PD TY+ ++ G G A + +M R P Y L++ G +GN
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 584
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+A + M G+ P++ T N LLS F + S+A + + M + P T +
Sbjct: 585 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTL 644
Query: 216 VIHCLVKLR 224
++ C R
Sbjct: 645 LLSCCTDAR 653
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 336 ARGVFEMIKRNK-LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
A G F +KR K + +Y ++ G + K+L EM +DG +PN V+ L+
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 395 AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
+ GR + + V + Q G + + V Y + I + G D A+ +Y+ M++ +
Sbjct: 402 HSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLS 461
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
D+ TY+++I+ K A EM+ + ++ ++ ++K A
Sbjct: 462 PDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKL 521
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+ M+++G PD VTY+ +++ G
Sbjct: 522 YRDMQNAGFQPDKVTYSIVMEVLGHCG 548
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 438 YDKALGLYKSM-RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
Y ALG + + R+ K D TYT ++ + ++GE ++EM+ + Y+
Sbjct: 339 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398
Query: 497 SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNF 545
++ +Y + + EA + FN M+ +GC PD VTY +++D + AG ++
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI 447
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 137/548 (25%), Positives = 226/548 (41%), Gaps = 55/548 (10%)
Query: 36 NFPFLIKELTQRGSIEHC-NLVFQWMKN--QRNYCARNDIYNMMIRLHARHNRIDQARGL 92
++ LI L++ G++E L+ + +K + N Y +IR + ++++A L
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLIT----YTAIIRGLCKMGKLEEAFVL 334
Query: 93 FFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGS 152
F + + D Y LI+ R G A +++ DM + I PS TYN +IN
Sbjct: 335 FNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCM 394
Query: 153 SGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTT 212
+G EA V K GV D++T++ LL ++ L I D
Sbjct: 395 AGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVM 449
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
NI++ + + Y +A ++ +M E + PD +Y ++I Y +GQIE FN
Sbjct: 450 CNILLKAFLLMGAYGEADALYRAMPEM--DLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA------ 326
+ + + V YN ++ A GM A V E+ + G DI + +LL++
Sbjct: 508 LRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Query: 327 --------YGRSQKPQKA--------------RGVFE-------MIKRNKLKPNLVS--Y 355
YG Q RG FE +++R L S
Sbjct: 567 DKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTIL 626
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
L+D S LD + ++ E +V+ ++ + K + S A+
Sbjct: 627 KTLVDNLRS---LDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
RG+ LNT+ YNS I G +AL L+ S+ + VTY ILI CK + +
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
A ++ M+ L + +Y+SI+ Y K GQ +A + +PD T +SM+
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 536 AYTAAGKM 543
Y G M
Sbjct: 804 GYCKKGDM 811
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 197/454 (43%), Gaps = 52/454 (11%)
Query: 133 RAAIPPSRSTYNNLINACG-SSGNWKEALNVCKK-MTDNGVGPDLVTHNILLSAFKSGSQ 190
+A+I P ++LI+ + + + L + + + ++G P +T L+ F +
Sbjct: 90 KASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGE 149
Query: 191 YSKALSYFELMKGTHIR-P-DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
A+ E+M ++ P D + VI K+ + + A+ F S + P++V
Sbjct: 150 MDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDS-GVLVPNLV 208
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
+YT+++ G+++ + EG + V Y+ + Y G +AL+ E+
Sbjct: 209 TYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREM 268
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNA----------- 357
+ G D+VSY+ L++ + ++A G+ + + ++PNL++Y A
Sbjct: 269 VEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKL 328
Query: 358 ------------------------LIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
LID G L+ A +L +MEQ GIQP++++ T+
Sbjct: 329 EEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTV 388
Query: 394 ---LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
L GR S+ ++ +G+ + + Y++ + SY+ V D L + + +
Sbjct: 389 INGLCMAGRVSEADEVS--------KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
KI D V IL+ M YGEA + M + L Y++++ Y K GQI E
Sbjct: 441 AKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEE 500
Query: 511 AESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
A FN ++ S S V Y ++DA G ++
Sbjct: 501 ALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLD 533
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/534 (20%), Positives = 220/534 (41%), Gaps = 69/534 (12%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++ + ++D+ R L +++ + D Y+ I+ + + G A+ +M+
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ +Y+ LI+ GN +EAL + KM GV P+L+T+ ++ +
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A F + I D +I + + ++A + M ++ P +++Y +
Sbjct: 330 EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG--IQPSILTYNT 387
Query: 253 IIHLYSVSG---------------------------QIENCEAAFNM---MLAEGIKPSI 282
+I+ ++G +++N +A + L I +
Sbjct: 388 VINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
V N L+ A+ G EA ++ + + PD +Y +++ Y ++ + ++A +F
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC-GRCS 401
++++ + V YN +IDA G+LD A ++L E+ + G+ ++ + TLL +
Sbjct: 508 LRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA------ 455
KG + V Q+ + N AI G ++ A+ +Y MR+K +
Sbjct: 567 DKGILGLVYGLEQLNS-DVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI 625
Query: 456 ----------------------------DSVTYTILISGSCKMSKYGEALSFMEEMMHLK 487
D + YTI+I+G CK +AL+
Sbjct: 626 LKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRG 685
Query: 488 LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+ ++ Y+S++ +QG +VEA F+ +++ G P VTY ++D G
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEG 739
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 177/412 (42%), Gaps = 6/412 (1%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N++++ +A L+ M E PD TY +I + + GQ A+ + +++ +
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
+++ + YN +I+A G A V ++ + G+ D+ T LL + +
Sbjct: 511 SSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 569
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK-SECHPDVVSYTS 252
L ++ + LN I L K ++ AI+++ MR K + P + T
Sbjct: 570 ILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTL 629
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+ +L S+ + A + + ++ Y ++ G +AL + + K G
Sbjct: 630 VDNLRSLDAYLLVVNAGETTLSS----MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRG 685
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
+ ++Y SL+N + +A +F+ ++ L P+ V+Y LID GL DA
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
K+L M G+ PN++ +++ + Q V+S M + + +S I Y
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
G+ ++AL ++ + K I AD + LI G C + EA + EM+
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 193/436 (44%), Gaps = 48/436 (11%)
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAI-PPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
+A+I+ + G+ A+ + + + + P+ TY L++A G E ++ +++
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 168 DNGVGPDLVTH-NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
D G D V + N + FK G+ ++ L++ R+
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGA--------------------------LVDALMQDRE- 267
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
M EK + DVVSY+ +I S G +E M+ EG++P++++Y
Sbjct: 268 ---------MVEKGM--NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYT 316
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
A++ G +EA ++FN I G D Y +L++ R +A + +++
Sbjct: 317 AIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
++P++++YN +I+ G + +A ++ G+ +V++ TLL + + +
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAV 431
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
+ I ++ V N + ++L +G Y +A LY++M + + D+ TY +I G
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEV-YSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
CK + EAL E+ K VS V Y+ I+ A K+G + A + G
Sbjct: 492 YCKTGQIEEALEMFNELR--KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYL 549
Query: 526 DVVTYTSMLDAYTAAG 541
D+ T ++L + A G
Sbjct: 550 DIHTSRTLLHSIHANG 565
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 180/394 (45%), Gaps = 22/394 (5%)
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
+ + +G P L + + L +++ L ++ + I + +IV + L
Sbjct: 15 QSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNL 74
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ--------IENCEAAFNMMLA 275
+Y+ A + F ++ K+ P S+IH +S++ + +C +
Sbjct: 75 NRYEDA-EKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDC------LRN 127
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI--KQNGFRPDIVSYTSLLNAYGRSQKP 333
G PS +++ +L+ + G A+ V + K + D +++++ + + KP
Sbjct: 128 HGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKP 187
Query: 334 QKARGVFE-MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
+ A G FE + L PNLV+Y L+ A G +D+ ++R +E +G + + V
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 393 LLAACGRCSQKGKIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
+ G ++ ++ +M +G+ + V+Y+ I G ++ALGL M K
Sbjct: 248 WIH--GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIK 305
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
+ ++ + +TYT +I G CKM K EA ++ + + V + +Y +++ ++G +
Sbjct: 306 EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNR 365
Query: 511 AESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
A S M+ G P ++TY ++++ AG+++
Sbjct: 366 AFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 8/308 (2%)
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
M E C+PD T+ L+N G+ A+ ++D M+ P Y +IN G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+ ALN+ KM + + +V +N ++ + A + F M I PD T +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
+I + ++ A + M E+ + +PDVV+++++I+ G++ E + ML
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIER--QINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
GI P+ ++YN+++ + +A + + + PD+V++++L+N Y ++++
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+F + R + N V+Y LI + G LD A +L M G+ PN ++ ++LA
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 396 ACGRCSQK 403
+ CS+K
Sbjct: 295 SL--CSKK 300
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 149/295 (50%), Gaps = 4/295 (1%)
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
++ C PDVV++T++++ G++ A + M+ EG +P Y ++ G +
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
AL + +++++ + +V Y ++++ + A+ +F + + P++++Y+ +I
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
D++ +G DA ++LR+M + I P+VV+ L+ A + + + E + RGI
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
T+ YNS I + + A + SM K D VT++ LI+G CK + +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
EM + + Y++++ + + G + A+ N+M SSG +P+ +T+ SML
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 152/318 (47%), Gaps = 6/318 (1%)
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQ 225
M + G PD+VT L++ + +AL+ + M +P T +I+ L K+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGT----IINGLCKMGD 56
Query: 226 YDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY 285
+ A+++ + M E + H VV Y +II G + + F M +GI P +++Y
Sbjct: 57 TESALNLLSKMEETHIKAH--VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
+ ++ ++ G +A + ++ + PD+V++++L+NA + K +A ++ + R
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
+ P ++YN++ID + L+DA ++L M P+VV+ TL+ + +
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
+ RGI NTV Y + I + VG+ D A L M + + +T+ +++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 466 GSCKMSKYGEALSFMEEM 483
C + +A + +E++
Sbjct: 295 SLCSKKELRKAFAILEDL 312
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IYN +I + A+ LF EM + PD TY+ +I++ R+G+W A ++ DM
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I P T++ LINA G EA + M G+ P +T+N ++ F +
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+ A + M PD T + +I+ K ++ D ++IF M + + V+YT
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV--ANTVTYT 255
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++IH + G ++ + N+M++ G+ P+ +++ +++ + + ++A + +++++
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 2/275 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y +I + + A L +M+E K YNA+I+ + G A N+ +M
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I P TY+ +I++ SG W +A + + M + + PD+VT + L++A + S
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A + M I P T T N +I K + + A + +SM K C PDVV++++
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS--CSPDVVTFST 221
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I+ Y + +++N F M GI + V+Y L+ + G A + N + +G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
P+ +++ S+L + ++ +KA + E +++++
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 124/272 (45%), Gaps = 4/272 (1%)
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
M+ G +P +V++ L+ G +AL + + + + G +P Y +++N +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
+ A + ++ +K ++V YNA+ID +G A + EM GI P+V++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
++ + R + E +L R I + V +++ I + + G+ +A +Y M ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
I ++TY +I G CK + +A ++ M +S+++ Y K ++
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
F M G + VTYT+++ + G ++
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 268
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 186/416 (44%), Gaps = 39/416 (9%)
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
YN +I+ G+ Q+ A +++D M + S T+ LI +G EA++ +M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 168 DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 227
D G PD + +I++S + S+A S+F+ +K
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK------------------------- 248
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
D F PDV+ YT+++ + +G+I E F M GI+P++ +Y+
Sbjct: 249 ---DRFE----------PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
++ A G A VF ++ +G P+ +++ +L+ + ++ + +K V+ +K+
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE 407
+P+ ++YN LI+A+ + L++A+K+L M + + N + T+ +
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
+ S + NTV YN + ++ D L + K M K+++ + TY +L++
Sbjct: 416 RMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMF 475
Query: 468 CKMSKYGEALSFMEEMMHLK-LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
C M + A +EM+ K L S +Y +L + GQ+ + E M G
Sbjct: 476 CGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 155/316 (49%), Gaps = 7/316 (2%)
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF---NMMLAEGIKPSIVS 284
+++ FN + H Y +I L SG++ + A+ ++M + ++ SI +
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDL---SGKVRQFDLAWHLIDLMKSRNVEISIET 188
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
+ L+ Y G+ EA+ FN ++ G PD ++++ +++ R ++ +A+ F+ +K
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK 248
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
++ +P+++ Y L+ + G + +A K+ +EM+ GI+PNV + ++ A RC Q
Sbjct: 249 -DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+ V + G N + +N+ + ++ G +K L +Y M+K + D++TY LI
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
C+ A+ + M+ K V+ +++I K+ + A ++ M + C
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 525 PDVVTYTSMLDAYTAA 540
P+ VTY ++ + +
Sbjct: 428 PNTVTYNILMRMFVGS 443
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 154/332 (46%), Gaps = 4/332 (1%)
Query: 57 FQWMKNQRNYCARN-DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
F W ++ +Y ++ YN MI L + + D A L M+ + ET+ LI +
Sbjct: 137 FNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRY 196
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
RAG A++ + M P + ++ +I+ EA + + D PD+
Sbjct: 197 VRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDV 255
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS 235
+ + L+ + + S+A F+ MK I P+ T +IVI L + Q +A D+F
Sbjct: 256 IVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFAD 315
Query: 236 MREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAH 295
M + S C P+ +++ +++ ++ +G+ E +N M G +P ++YN L+ A+
Sbjct: 316 MLD--SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD 373
Query: 296 GMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY 355
+ A+ V N + + + ++ ++ + + A ++ + K +PN V+Y
Sbjct: 374 ENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTY 433
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
N L+ + + D +K+ +EM+ ++PNV
Sbjct: 434 NILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV 465
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 151/351 (43%), Gaps = 7/351 (1%)
Query: 35 KNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLF 93
+ F LI+ + G F M++ C + I ++++I +R R +A+ F
Sbjct: 187 ETFTILIRRYVRAGLASEAVHCFNRMEDYG--CVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 94 FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 153
+++ R +PD Y L+ RAG+ A + +M A I P+ TY+ +I+A
Sbjct: 245 DSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC 303
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
G A +V M D+G P+ +T N L+ + K L + MK PDT T
Sbjct: 304 GQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITY 363
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N +I + + A+ + N+M +KK C + ++ +I + ++ M
Sbjct: 364 NFLIEAHCRDENLENAVKVLNTMIKKK--CEVNASTFNTIFRYIEKKRDVNGAHRMYSKM 421
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+ +P+ V+YN L+ + L + E+ P++ +Y L+ +
Sbjct: 422 MEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHW 481
Query: 334 QKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
A +F EM++ L P+L Y ++ G L +++ +M Q G+
Sbjct: 482 NNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
R ++++ + I Y+ G +A+ + M D + ++I+IS + + E
Sbjct: 180 RNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASE 239
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
A SF + + P VY++++ + + G+I EAE F MK +G P+V TY+ ++D
Sbjct: 240 AQSFFDSLKDRFEP-DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVID 298
Query: 536 AYTAAGKMN 544
A G+++
Sbjct: 299 ALCRCGQIS 307
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 224/479 (46%), Gaps = 30/479 (6%)
Query: 80 HARHNRIDQARGLF----FEMQE--WRCKPDAETYNALINAHGRAGQWRWAMNIMDDM-L 132
H H +ID++ F FE+ R ++ YN L+ R G+ + +++++D+
Sbjct: 374 HVGH-QIDESMPQFPARNFELHNSNGRSPETSDAYNRLL----RDGRIKDCISLLEDLDQ 428
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R + + + + AC KEA K + + P + T N+L+S S
Sbjct: 429 RDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI----LNPTMSTFNMLMSVCASSQDIE 484
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A L++ + + D +I K + D ++F+ M E ++ ++ +
Sbjct: 485 GARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEA--NLHTFGA 542
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK--Q 310
+I + +GQ+ A+ ++ ++ +KP V +NAL+ A G A V E+K
Sbjct: 543 LIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAET 602
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
+ PD +S +L+ A + + ++A+ V++MI + ++ Y +++ +G D
Sbjct: 603 HPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDF 662
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
A I ++M++ + P+ V L+ G + +L A+ +GI+L T++Y+S +G
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMG 722
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+ N ++ KAL LY+ ++ K++ T LI+ C+ ++ +A+ +++E+ L L
Sbjct: 723 ACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKP 782
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLM---KSSGCSPDVVTYTSMLDAYTAAGKMNFE 546
+ YS ++ A ++ E +F L+ K G SP+++ M T+ K FE
Sbjct: 783 NTITYSMLMLASERKDDF---EVSFKLLSQAKGDGVSPNLI----MCRCITSLCKRRFE 834
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 163/338 (48%), Gaps = 10/338 (2%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+Y +I A+ ++D +F +M + + T+ ALI+ RAGQ A +
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT--DNGVGPDLVTHNILLSAFKSGS 189
+ P R +N LI+ACG SG A +V +M + + PD ++ L+ A +
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 190 QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
Q +A ++++ IR I ++ K +D A I+ M+EK + PD V
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK--DVTPDEVF 681
Query: 250 YTSIIHLYSVSGQIENCEAAFNMML---AEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
++++I V+G + + AF ++ ++GI+ +SY++L+GA K+AL ++
Sbjct: 682 FSALI---DVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE 738
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
+IK RP I + +L+ A + KA + IK LKPN ++Y+ L+ A
Sbjct: 739 KIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKD 798
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
+ + K+L + + DG+ PN++ + + C R +K
Sbjct: 799 DFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEKA 836
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 175/416 (42%), Gaps = 41/416 (9%)
Query: 44 LTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNR-IDQARGLFFEMQEWRCK 102
L + G I+ C + + + +QR+ + IY+ + R + +A F +
Sbjct: 410 LLRDGRIKDCISLLEDL-DQRDLLDMDKIYHASFFKACKKQRAVKEA----FRFTKLILN 464
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
P T+N L++ + A ++ + + + Y LI++C SG V
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
+M+++GV +L T L+ Q +KA + +++ +++PD N +I +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK--- 279
D+A D+ M+ + PD +S +++ +GQ+E + + M+ GI+
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 280 --------------------------------PSIVSYNALVGAYAAHGMGKEALLVFNE 307
P V ++AL+ M EA + +
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
K G R +SY+SL+ A ++ +KA ++E IK KL+P + + NALI A
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
L A++ L E++ G++PN ++ L+ A R +LS A+ G+ N +
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
L+K G +E V+Q M ++ ++Y + + ++ D A ++ +M+E
Sbjct: 615 LMKACCNAGQVERAKEVYQ-MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK 673
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
PD ++ALI+ G A A I+ D I +Y++L+ AC ++ +WK+A
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKA 733
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
L + +K+ + P + T N L++A G+Q KA+ Y + +K ++P+T T ++++
Sbjct: 734 LELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 4/223 (1%)
Query: 334 QKARGVFEMIKRNKL--KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
+K R V E + KL P + ++N L+ S+ ++ A +LR +++ G+ +
Sbjct: 447 KKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYT 506
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
TL+++C + + + V G++ N + + I G+ KA G Y +R K
Sbjct: 507 TLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK 566
Query: 452 KIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS--SILCAYSKQGQIV 509
+K D V + LIS + A + EM P+ + S +++ A GQ+
Sbjct: 567 NVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVE 626
Query: 510 EAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
A+ + ++ G YT +++ + +G +F Y+D
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKD 669
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 3/347 (0%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
+ + + ++ A +A G+F M++++ K ET N L+++ GRA + A ++ D
Sbjct: 230 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFD 288
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
L+ P+ TY L+N N EA + M D G+ PD+V HN++L +
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
S A+ F +MK P+ + I+I K + AI+ F+ M + S PD Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD--SGLQPDAAVY 406
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T +I + +++ M +G P +YNAL+ A M + A ++N++ Q
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 466
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
N P I ++ ++ +Y ++ + R V+E + + + P+ SY LI G +
Sbjct: 467 NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG 417
A + L EM G++ ++ A R Q E + A+ G
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 182/396 (45%), Gaps = 13/396 (3%)
Query: 115 HGRAGQWR---WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV 171
H R +R WA R TYN++++ + ++ ++V ++M G+
Sbjct: 173 HARKPAFRFFCWAAE------RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL 226
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
+ T I + AF + + KA+ FELMK + T+N ++ L + + +A
Sbjct: 227 -LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQV 285
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+F+ ++E+ + P++++YT +++ + + +N M+ +G+KP IV++N ++
Sbjct: 286 LFDKLKERFT---PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
+A+ +F+ +K G P++ SYT ++ + + + A F+ + + L+P+
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
Y LI +G+ LD ++L+EM++ G P+ + L+ + +
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYN 462
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
I+ + +N + SY Y+ +++ M KK I D +YT+LI G
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEG 522
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
K EA ++EEM+ + Y+ + + GQ
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 43/278 (15%)
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+G +YN+++ A + + V E+ G + ++T + A+ +++ +K
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A G+FE++K+ K K + + N L+D+ G L +A ++L + ++ PN+++ LL
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLN 306
Query: 396 ACGRCSQKGKIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
G C + IE M +G+K + VA+N + L + A+ L+ M+ K
Sbjct: 307 --GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ +YTI+I CK S A+ + ++M+
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMV----------------------------- 395
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN--FEPLK 549
SG PD YT ++ + K++ +E LK
Sbjct: 396 ------DSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 1/166 (0%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+F MK+ + C Y +MIR + + ++ A F +M + +PDA Y LI
Sbjct: 355 LFHVMKS-KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
G + ++ +M PP TYN LI + + A + KM N + P +
Sbjct: 414 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSI 473
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
T N+++ ++ Y + +E M I PD + ++I L+
Sbjct: 474 HTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLI 519
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 173/384 (45%), Gaps = 36/384 (9%)
Query: 179 NILLSAFKSGSQYSKALSYFELMK----GTHIRPDTTTLNIVIHCLVKLRQYDKA----- 229
N+LL K Y +L +F K G+H T IV+H L K R++ A
Sbjct: 86 NVLL---KIQKDYLLSLEFFNWAKTRNPGSH---SLETHAIVLHTLTKNRKFKSAESILR 139
Query: 230 -------ID----IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
+D +F+++ EC + S+ ++ + N F M G
Sbjct: 140 DVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGF 199
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
P++ S NA + + G AL + E+++ P+ + +++ Y RS K K
Sbjct: 200 LPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+ + ++R + VSYN LI + GLL A+K+ M + G+QPNVV+ TL+
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
R + + V + + NTV YN+ I Y G+++ A Y+ M I+ D +
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE--AESTFN 516
TY LI G CK +K +A F++E+ L + +S+++ GQ V A+ F
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI-----MGQCVRKNADRGFE 434
Query: 517 LMKS---SGCSPDVVTYTSMLDAY 537
L KS SGC P+ T+ ++ A+
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 153/332 (46%), Gaps = 12/332 (3%)
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
L F ++ A F MK P + N + L+ + D A+ + MR +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR--R 231
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
+ P+ + ++ Y SG+++ M G + + VSYN L+ + G+
Sbjct: 232 CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSS 291
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
AL + N + ++G +P++V++ +L++ + R+ K Q+A VF +K + PN V+YN LI+
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
Y G + A + +M +GIQ ++++ L+ G C Q +T +A ++ +
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF--GLCKQA---KTRKAAQFVKELDK 406
Query: 421 NTVAYNSAIGSYLNVGE-----YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
+ NS+ S L +G+ D+ LYKSM + + T+ +L+S C+ +
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
A + EM+ +P+ + QG+
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 164/360 (45%), Gaps = 12/360 (3%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+++ + + A + A F +M+++ P E+ NA +++ G+ A+ +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
R I P+ T N +++ SG + + + + M G V++N L++
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
S AL +M + ++P+ T N +IH + + +A +F M K P+ V+Y
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM--KAVNVAPNTVTYN 347
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++I+ YS G E + M+ GI+ I++YNAL+ ++A E+ +
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK---RNKLKPNLVSYNALIDAYGSNGLL 368
P+ ++++L+ G+ + RG FE+ K R+ PN ++N L+ A+ N
Sbjct: 408 NLVPNSSTFSALI--MGQCVRKNADRG-FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ-MRGIKLNTVAYNS 427
D A ++LREM + I + T+ C +GK + V Q M G K ++N+
Sbjct: 465 DGASQVLREMVRRSIP---LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFNN 521
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 151/359 (42%), Gaps = 6/359 (1%)
Query: 101 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 160
C +++L ++R A + M P+ + N +++ G AL
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 161 NVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI--H 218
++M + P+ T N+++S + + K + + M+ R + N +I H
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
C L A+ + N M KS P+VV++ ++IH + + +++ F M A +
Sbjct: 284 CEKGL--LSSALKLKNMM--GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
P+ V+YN L+ Y+ G + A + ++ NG + DI++Y +L+ + K +KA
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+ + + L PN +++ALI D ++ + M + G PN + L++A
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
R VL R I L++ + + G+ L + M KK +S
Sbjct: 460 RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 35/233 (15%)
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
+ SL + +K + A F +K P + S NA + + G +D A++ REM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+ I PN ++ N + Y G+ D
Sbjct: 231 RCKISPNPYTL-----------------------------------NMVMSGYCRSGKLD 255
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
K + L + M + +A V+Y LI+G C+ AL M L + +++++
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI 315
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
+ + ++ EA F MK+ +P+ VTY ++++ Y+ G YED
Sbjct: 316 HGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 173/384 (45%), Gaps = 36/384 (9%)
Query: 179 NILLSAFKSGSQYSKALSYFELMK----GTHIRPDTTTLNIVIHCLVKLRQYDKA----- 229
N+LL K Y +L +F K G+H T IV+H L K R++ A
Sbjct: 86 NVLL---KIQKDYLLSLEFFNWAKTRNPGSH---SLETHAIVLHTLTKNRKFKSAESILR 139
Query: 230 -------ID----IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
+D +F+++ EC + S+ ++ + N F M G
Sbjct: 140 DVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGF 199
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
P++ S NA + + G AL + E+++ P+ + +++ Y RS K K
Sbjct: 200 LPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+ + ++R + VSYN LI + GLL A+K+ M + G+QPNVV+ TL+
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
R + + V + + NTV YN+ I Y G+++ A Y+ M I+ D +
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE--AESTFN 516
TY LI G CK +K +A F++E+ L + +S+++ GQ V A+ F
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI-----MGQCVRKNADRGFE 434
Query: 517 LMKS---SGCSPDVVTYTSMLDAY 537
L KS SGC P+ T+ ++ A+
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 153/332 (46%), Gaps = 12/332 (3%)
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
L F ++ A F MK P + N + L+ + D A+ + MR +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR--R 231
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
+ P+ + ++ Y SG+++ M G + + VSYN L+ + G+
Sbjct: 232 CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSS 291
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
AL + N + ++G +P++V++ +L++ + R+ K Q+A VF +K + PN V+YN LI+
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
Y G + A + +M +GIQ ++++ L+ G C Q +T +A ++ +
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF--GLCKQA---KTRKAAQFVKELDK 406
Query: 421 NTVAYNSAIGSYLNVGE-----YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
+ NS+ S L +G+ D+ LYKSM + + T+ +L+S C+ +
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
A + EM+ +P+ + QG+
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 164/360 (45%), Gaps = 12/360 (3%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+++ + + A + A F +M+++ P E+ NA +++ G+ A+ +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
R I P+ T N +++ SG + + + + M G V++N L++
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
S AL +M + ++P+ T N +IH + + +A +F M K P+ V+Y
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM--KAVNVAPNTVTYN 347
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
++I+ YS G E + M+ GI+ I++YNAL+ ++A E+ +
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK---RNKLKPNLVSYNALIDAYGSNGLL 368
P+ ++++L+ G+ + RG FE+ K R+ PN ++N L+ A+ N
Sbjct: 408 NLVPNSSTFSALI--MGQCVRKNADRG-FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ-MRGIKLNTVAYNS 427
D A ++LREM + I + T+ C +GK + V Q M G K ++N+
Sbjct: 465 DGASQVLREMVRRSIP---LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFNN 521
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 151/359 (42%), Gaps = 6/359 (1%)
Query: 101 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 160
C +++L ++R A + M P+ + N +++ G AL
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 161 NVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI--H 218
++M + P+ T N+++S + + K + + M+ R + N +I H
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
C L A+ + N M KS P+VV++ ++IH + + +++ F M A +
Sbjct: 284 CEKGL--LSSALKLKNMM--GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
P+ V+YN L+ Y+ G + A + ++ NG + DI++Y +L+ + K +KA
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+ + + L PN +++ALI D ++ + M + G PN + L++A
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
R VL R I L++ + + G+ L + M KK +S
Sbjct: 460 RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 35/233 (15%)
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
+ SL + +K + A F +K P + S NA + + G +D A++ REM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+ I PN ++ N + Y G+ D
Sbjct: 231 RCKISPNPYTL-----------------------------------NMVMSGYCRSGKLD 255
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
K + L + M + +A V+Y LI+G C+ AL M L + +++++
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI 315
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
+ + ++ EA F MK+ +P+ VTY ++++ Y+ G YED
Sbjct: 316 HGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 177/377 (46%), Gaps = 33/377 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N +I + ++ A +M+E P TYN LI +G AG+ + ++D ML
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 133 RAA---IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGS 189
+ P+ T+N L+ A +EA V KKM + GV PD VT+N + + +
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 190 QYSKALSYF--ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDV 247
+ +A S +++ +P+ T IV+ + + + M+E + E ++
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA--NL 295
Query: 248 VSYTSIIH-------------------LYSVSGQIENCE------AAFNMMLAEGIKPSI 282
V + S+I+ L S + ++E +M +K +
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADV 355
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
++Y+ ++ A+++ G ++A VF E+ + G +PD +Y+ L Y R+++P+KA + E
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+ +PN+V + +I + SNG +DDA+++ +M + G+ PN+ + TL+ Q
Sbjct: 416 LIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQ 474
Query: 403 KGKIETVLSAAQMRGIK 419
K E VL + G+K
Sbjct: 475 PWKAEEVLQMMRGCGVK 491
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 215/488 (44%), Gaps = 32/488 (6%)
Query: 64 RNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
R +R + N++I R +A+ +F + E +P +Y L+ A Q+
Sbjct: 43 RTVRSRTKLMNVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGS 98
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
+I+ ++ ++ +N +INA SGN ++A+ KM + G+ P T+N L+
Sbjct: 99 ISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIK 158
Query: 184 AFKSGSQYSKALSYFELM---KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
+ + ++ +LM + P+ T N+++ K ++ ++A ++ M E
Sbjct: 159 GYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE-- 216
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAF--NMMLAEGIKPSIVSYNALVGAYAAHGMG 298
PD V+Y +I Y G+ E+ M++ E KP+ + +VG Y G
Sbjct: 217 CGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-----KLKPNLV 353
++ L +K+ ++V + SL+N G E++ R+ L L+
Sbjct: 277 RDGLRFVRRMKEMRVEANLVVFNSLIN------------GFVEVMDRDGIDEVTLTLLLM 324
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA 413
S+N ++ G+ + +++L M++ ++ +V++ T++ A K V
Sbjct: 325 SFNEEVELVGNQKM---KVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 381
Query: 414 QMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
G+K + AY+ Y+ E KA L +++ + + + V +T +ISG C
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSM 440
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
+A+ +M + + + + +++ Y + Q +AE +M+ G P+ T+ +
Sbjct: 441 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 500
Query: 534 LDAYTAAG 541
+A+ AG
Sbjct: 501 AEAWRVAG 508
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 186/399 (46%), Gaps = 46/399 (11%)
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+G QY S E +R T +N++I + R ++ A +F ++ E P
Sbjct: 26 TGGQYRFCKSCVEGSSCRTVRSRTKLMNVLIE---RGRPHE-AQTVFKTLAETGH--RPS 79
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
++SYT+++ +V Q + + + + G K + +NA++ A++ G ++A+
Sbjct: 80 LISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALL 139
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN---KLKPNLVSYNALIDAYG 363
++K+ G P +Y +L+ YG + KP+++ + +++ + PN+ ++N L+ A+
Sbjct: 140 KMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWC 199
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI-----ETVLSAAQMRGI 418
+++A +++++ME+ G++P+ V+ T +A C QKG+ E V
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNT-IATC--YVQKGETVRAESEVVEKMVMKEKA 256
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK-MSKYG--- 474
K N +G Y G L + M++ +++A+ V + LI+G + M + G
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 475 -----EALSFMEEM-------MHLK-LPVSKE--------VYSSILCAYSKQGQIVEAES 513
+SF EE+ M ++ L + KE YS+++ A+S G + +A
Sbjct: 317 VTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 376
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
F M +G PD Y+ + Y A EP K E+
Sbjct: 377 VFKEMVKAGVKPDAHAYSILAKGYVRAK----EPKKAEE 411
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 157/340 (46%), Gaps = 32/340 (9%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW-RWAMNIMDDM 131
+N++++ + ++++A + +M+E +PD TYN + + + G+ R +++ M
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM 250
Query: 132 -LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKS--- 187
++ P+ T ++ G ++ L ++M + V +LV N L++ F
Sbjct: 251 VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Query: 188 -----------------------GSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
G+Q K + LMK +++ D T + V++
Sbjct: 311 RDGIDEVTLTLLLMSFNEEVELVGNQKMK-VQVLTLMKECNVKADVITYSTVMNAWSSAG 369
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS 284
+KA +F M K+ PD +Y+ + Y + + + E ++ E +P++V
Sbjct: 370 YMEKAAQVFKEMV--KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVI 426
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
+ ++ + ++G +A+ VFN++ + G P+I ++ +L+ Y ++P KA V +M++
Sbjct: 427 FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 486
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
+KP ++ L +A+ GL D++ K + ++ I+
Sbjct: 487 GCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIE 526
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 220/519 (42%), Gaps = 46/519 (8%)
Query: 50 IEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYN 109
+EH F+W + D + MI++ ++++ AR + +M E D + +
Sbjct: 130 LEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFV 189
Query: 110 ALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN 169
LI ++G+AG + ++ I M + + +YN+L G + A KM
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE 249
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
GV P T+N++L F + AL +FE MK I PD T N +I+ + ++ D+A
Sbjct: 250 GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEA 309
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
+F M K ++ P VVSYT++I Y ++++ F M + GI+P+ +Y+ L+
Sbjct: 310 EKLFVEM--KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRP-----------------DIVSYTSLLNAYGRSQK 332
G EA + + P D+ + T +L A
Sbjct: 368 PGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNV 427
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK---ILR-----EMEQDGIQ 384
P +A G + ++ N+ K + +YN I LLD I+ ILR EME
Sbjct: 428 PAEA-GHYGVLIENQCKAS--AYNRAIK------LLDTLIEKEIILRHQDTLEMEPSAYN 478
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
P + +C Q K E + RG++ + A N+ I + G D + +
Sbjct: 479 PIIEYLCN-------NGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEI 530
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
K M ++ + +S Y +LI + G+A + ++ M+ ++ S++ + +
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE 590
Query: 505 QGQIVEAESTFNLM--KSSGCSPDVVTYTSMLDAYTAAG 541
G++ A +M K+ G ++ +L+A G
Sbjct: 591 DGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRG 629
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 5/260 (1%)
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGF-RPDIVSYTSLLNAYGRSQKPQKARGVFEMI 343
YN L GA + AL F +++G R D ++ ++ G K AR + +
Sbjct: 121 YNVLHGAKKL----EHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDM 176
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
+ + + LI++YG G++ +++KI ++M+ G++ + S +L R +
Sbjct: 177 PEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRY 236
Query: 404 GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
+ + G++ YN + + + AL ++ M+ + I D T+ +
Sbjct: 237 MMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTM 296
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGC 523
I+G C+ K EA EM K+ S Y++++ Y ++ + F M+SSG
Sbjct: 297 INGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGI 356
Query: 524 SPDVVTYTSMLDAYTAAGKM 543
P+ TY+++L AGKM
Sbjct: 357 EPNATTYSTLLPGLCDAGKM 376
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 3/347 (0%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
+ + + ++ A +A G+F M++++ K ET N L+++ GRA + A ++ D
Sbjct: 229 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFD 287
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
L+ P+ TY L+N N EA + M D+G+ PD+V HN++L +
Sbjct: 288 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
S A+ F +MK P+ + I+I K + AI+ F+ M + S PD Y
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD--SGLQPDAAVY 405
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T +I + +++ M +G P +YNAL+ A M + ++N++ Q
Sbjct: 406 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 465
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
N P I ++ ++ +Y ++ + R V++ + + + P+ SY LI S G +
Sbjct: 466 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG 417
A + L EM G++ ++ A R Q E + A+ G
Sbjct: 526 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 180/396 (45%), Gaps = 13/396 (3%)
Query: 115 HGRAGQWR---WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV 171
H R +R WA R TYN++++ + ++ ++V ++M G+
Sbjct: 172 HARKPAFRFFCWAAE------RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL 225
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
+ T I + AF + + KA+ FELMK + T+N ++ L + + +A
Sbjct: 226 -LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQV 284
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+F+ ++E+ + P++++YT +++ + + +N M+ G+KP IV++N ++
Sbjct: 285 LFDKLKERFT---PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 341
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
+A+ +F+ +K G P++ SYT ++ + + + A F+ + + L+P+
Sbjct: 342 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
Y LI +G+ LD ++L+EM++ G P+ + L+ + +
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 461
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
I+ + +N + SY Y+ ++ M KK I D +YT+LI G
Sbjct: 462 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 521
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
K EA ++EEM+ + Y+ + + GQ
Sbjct: 522 KSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 43/278 (15%)
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+G +YN+++ A + + V E+ G + ++T + A+ +++ +K
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 246
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A G+FE++K+ K K + + N L+D+ G L +A ++L + ++ PN+++ LL
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLN 305
Query: 396 ACGRCSQKGKIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
G C + IE M G+K + VA+N + L + A+ L+ M+ K
Sbjct: 306 --GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ +YTI+I CK S A+ +
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEY---------------------------------- 389
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN--FEPLK 549
F+ M SG PD YT ++ + K++ +E LK
Sbjct: 390 -FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+F MK+ + C Y +MIR + + ++ A F +M + +PDA Y LI
Sbjct: 354 LFHVMKS-KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
G + ++ +M PP TYN LI + + + KM N + P +
Sbjct: 413 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 472
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS 235
T N+++ ++ Y + ++ M I PD + ++I L+ + +A
Sbjct: 473 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 532
Query: 236 MREK 239
M +K
Sbjct: 533 MLDK 536
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 182/400 (45%), Gaps = 46/400 (11%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN +I+ + R ID+A + M+E +PD TYN+LI+ + + + D+ML
Sbjct: 51 YNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML 110
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKK-MTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + P +YN L++ G EA + + + G+ P + T+NILL A
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHT 170
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE-KKSECHPDVVSY 250
A+ F+ +K + ++P+ T NI+I+ L K R+ ++D MRE KKS P+ V+Y
Sbjct: 171 DNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVG-SVDWM--MRELKKSGYTPNAVTY 226
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T+++ +Y + +IE F M EG + A+V A G +EA +E+ +
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 311 NGFRP-DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
+G R DIVSY +LLN Y + + E I+ LKP+ ++ +++ + G
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTG 346
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
A K L + + G+QP+VV+ N I
Sbjct: 347 GAEKHLACIGEMGMQPSVVTC-----------------------------------NCLI 371
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
G D+A+ L+ SM + D TYT ++ CK
Sbjct: 372 DGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCK 407
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 157/334 (47%), Gaps = 5/334 (1%)
Query: 210 TTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAA 269
T LNI ++ L K R ++A + + + PDV++Y ++I Y+ I+ A
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLL--IDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAV 70
Query: 270 FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
M GI+P + +YN+L+ A + M L +F+E+ +G PD+ SY +L++ Y +
Sbjct: 71 TRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Query: 330 SQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
+ +A + E I L P + +YN L+DA +G D+AI++ + ++ ++P ++
Sbjct: 131 LGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELM 189
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
+ L+ + + G ++ ++ + G N V Y + + Y +K L L+ M
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 449 RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV-YSSILCAYSKQGQ 507
+K+ D ++S K + EA M E++ V Y+++L Y K G
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+ + ++ G PD T+T +++ G
Sbjct: 310 LDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIG 343
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 174/383 (45%), Gaps = 23/383 (6%)
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
GV PD++T+N L+ + +A + M+ I PD TT N +I K ++
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE----GIKPSIVSY 285
+ +F+ M S PD+ SY +++ Y G+ AF ++ + G+ P I +Y
Sbjct: 103 LQLFDEMLH--SGLSPDMWSYNTLMSCYFKLGRHGE---AFKILHEDIHLAGLVPGIDTY 157
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
N L+ A G A+ +F +K +P++++Y L+N +S++ + +K+
Sbjct: 158 NILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA---CGRCSQ 402
+ PN V+Y ++ Y ++ +++ +M+++G + + C +++A GR +
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEE 276
Query: 403 KGKI--ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
+ E V S + + I V+YN+ + Y G D L + + K +K D T+
Sbjct: 277 AYECMHELVRSGTRSQDI----VSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTH 332
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
TI+++G + G A + + + + S + ++ K G + A F M+
Sbjct: 333 TIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV 392
Query: 521 SGCSPDVVTYTSMLDAYTAAGKM 543
D TYTS++ G++
Sbjct: 393 R----DEFTYTSVVHNLCKDGRL 411
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 3/347 (0%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
+ + + ++ A +A G+F M++++ K ET N L+++ GRA + A ++ D
Sbjct: 230 ETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFD 288
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
L+ P+ TY L+N N EA + M D+G+ PD+V HN++L +
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 348
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
S A+ F +MK P+ + I+I K + AI+ F+ M + S PD Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD--SGLQPDAAVY 406
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T +I + +++ M +G P +YNAL+ A M + ++N++ Q
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 466
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
N P I ++ ++ +Y ++ + R V++ + + + P+ SY LI S G +
Sbjct: 467 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG 417
A + L EM G++ ++ A R Q E + A+ G
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 181/396 (45%), Gaps = 13/396 (3%)
Query: 115 HGRAGQWR---WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV 171
H R +R WA R + TYN++++ + ++ ++V ++M G+
Sbjct: 173 HARKPAFRFFCWAAE------RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL 226
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
+ T I + AF + + KA+ FELMK + T+N ++ L + + +A
Sbjct: 227 -LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQV 285
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+F+ ++E+ + P++++YT +++ + + +N M+ G+KP IV++N ++
Sbjct: 286 LFDKLKERFT---PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 342
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
+A+ +F+ +K G P++ SYT ++ + + + A F+ + + L+P+
Sbjct: 343 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
Y LI +G+ LD ++L+EM++ G P+ + L+ + +
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 462
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
I+ + +N + SY Y+ ++ M KK I D +YT+LI G
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 522
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
K EA ++EEM+ + Y+ + + GQ
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 43/278 (15%)
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+G + +YN+++ A + + V E+ G + ++T + A+ +++ +K
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A G+FE++K+ K K + + N L+D+ G L +A ++L + ++ PN+++ LL
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLN 306
Query: 396 ACGRCSQKGKIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
G C + IE M G+K + VA+N + L + A+ L+ M+ K
Sbjct: 307 --GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 364
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ +YTI+I CK S A+ +
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEY---------------------------------- 390
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN--FEPLK 549
F+ M SG PD YT ++ + K++ +E LK
Sbjct: 391 -FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+F MK+ + C Y +MIR + + ++ A F +M + +PDA Y LI
Sbjct: 355 LFHVMKS-KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
G + ++ +M PP TYN LI + + + KM N + P +
Sbjct: 414 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 473
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS 235
T N+++ ++ Y + ++ M I PD + ++I L+ + +A
Sbjct: 474 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 533
Query: 236 MREK 239
M +K
Sbjct: 534 MLDK 537
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 206/437 (47%), Gaps = 15/437 (3%)
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
N+LI + R G+ + + + M + S++N+++++ G +A+ + +M
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNL----SSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
G+ PD+VT N LLS + S A++ + M+ ++P T++++ ++ + +
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
I + +++ DV T++I +Y +G + F+MM A+ +IV++N+L
Sbjct: 244 GKAIHGYIL--RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSL 297
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
V + + K+A + +++ G +PD +++ SL + Y KP+KA V +K +
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET 408
PN+VS+ A+ NG +A+K+ +M+++G+ PN ++ TLL G S +
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 409 VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
V + + + + + Y G+ A+ ++ ++ K + ++ ++ G
Sbjct: 418 VHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWNCMLMGYA 473
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS-GCSPDV 527
+ E ++ M+ + ++S+L G + E F+LM+S G P +
Sbjct: 474 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 533
Query: 528 VTYTSMLDAYTAAGKMN 544
+ M+D +G ++
Sbjct: 534 EHCSCMVDLLGRSGYLD 550
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 214/496 (43%), Gaps = 48/496 (9%)
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 148
A LF EM K D +N ++ + R+G W A+ + +M + ST L+
Sbjct: 42 ANKLFDEMP----KRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 149 ACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRP 208
C + + E + + G+ ++ N L+ + + + F MK ++
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL-- 155
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
++ N ++ KL D AI + + M + PD+V++ S++ Y+ G ++ A
Sbjct: 156 --SSWNSILSSYTKLGYVDDAIGLLDEM--EICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
M G+KPS S ++L+ A A G K + I +N D+ T+L++ Y
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
++ AR VF+M+ N+V++N+L+ LL DA ++ ME++GI+P+ +
Sbjct: 272 KTGYLPYARMVFDMMD----AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAI 327
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
+ +L + + K V+ + +G+ N V++ + G + AL ++ M
Sbjct: 328 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Query: 449 RKKKIKADSVTYTIL---------------ISGSC-----------------KMSKYGEA 476
+++ + ++ T + L + G C K G+
Sbjct: 388 QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDL 447
Query: 477 LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
S +E +K S ++ +L Y+ G+ E + F++M +G PD +T+TS+L
Sbjct: 448 QSAIEIFWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 537 YTAAGKMNFEPLKYED 552
+G + E KY D
Sbjct: 507 CKNSGLVQ-EGWKYFD 521
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 222/517 (42%), Gaps = 53/517 (10%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI ++ G +E VF MK+ RN + N I + +L +D A GL EM+
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKD-RNLSSWNSILSSYTKL----GYVDDAIGLLDEMEIC 184
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
KPD T+N+L++ + G + A+ ++ M A + PS S+ ++L+ A G+ K
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAF-KSG--------------------SQYSKALSYF 198
+ + N + D+ L+ + K+G + LSY
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 199 ELMKGTH----------IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
L+K I+PD T N + L + +KA+D+ M+EK P+VV
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG--VAPNVV 362
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL---VGAYAAHGMGKEALLVF 305
S+T+I S +G N F M EG+ P+ + + L +G + GKE V
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE---VH 419
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
+ D T+L++ YG+S Q A +F IK NK +L S+N ++ Y
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK-NK---SLASWNCMLMGYAMF 475
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
G ++ I M + G++P+ ++ ++L+ C + + R + T+ +
Sbjct: 476 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEH 535
Query: 426 NSAIGSYLNVGEY-DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
S + L Y D+A ++M +K D+ + +S SCK+ + E + +
Sbjct: 536 CSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAFLS-SCKIHRDLELAEIAWKRL 591
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
+ P + Y ++ YS + + E NLM+++
Sbjct: 592 QVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 188/415 (45%), Gaps = 35/415 (8%)
Query: 60 MKNQRNYCARNDIY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGR 117
++NQ Y D+Y +I ++ + + AR + F+M + + +N+L++
Sbjct: 252 LRNQLWY----DVYVETTLIDMYIKTGYLPYAR-MVFDMMD---AKNIVAWNSLVSGLSY 303
Query: 118 AGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVT 177
A + A +M M + I P T+N+L + + G ++AL+V KM + GV P++V+
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 178 HNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
+ S + AL F M+ + P+ T++ ++ L L ++
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 238 EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK-PSIVSYNALVGAYAAHG 296
K C D T+++ +Y SG +++ F GIK S+ S+N ++ YA G
Sbjct: 424 RKNLIC--DAYVATALVDMYGKSGDLQSAIEIF-----WGIKNKSLASWNCMLMGYAMFG 476
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK-RNKLKPNLVSY 355
G+E + F+ + + G PD +++TS+L+ S Q+ F++++ R + P +
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
+ ++D G +G LD+A ++ M ++P+ L++C KI L A++
Sbjct: 537 SCMVDLLGRSGYLDEAWDFIQTMS---LKPDATIWGAFLSSC-------KIHRDLELAEI 586
Query: 416 RGIKL------NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+L N+ Y I Y N+ ++ + MR +++ + I I
Sbjct: 587 AWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQI 641
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 216/506 (42%), Gaps = 40/506 (7%)
Query: 73 YNMMIRLHARHNRIDQARGLFFE-MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
Y++MI + + +D A LF + Y LI + G A++++ M
Sbjct: 345 YHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRM 404
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG------PDL---------- 175
L I P TY L+ K A+ + + + DNG G DL
Sbjct: 405 LDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESL 464
Query: 176 -------------VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
V ++ +A S Y ALS E M P + N VI CL +
Sbjct: 465 LGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQ 524
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
+ + N ++E + PDV +Y +++ + A + M G++P++
Sbjct: 525 ENIIEDLASLVNIIQE--LDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTV 582
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
Y++++G+ G EA F ++ ++G +PD ++Y ++N Y R+ + +A + E
Sbjct: 583 AIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEE 642
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+ ++ L+P+ +Y LI + G+++ + L +M +DG+ PNVV L+ G +
Sbjct: 643 VVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI---GHFLK 699
Query: 403 KGKIETVLSAAQMRG---IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
KG + + + G IK + +AY + + K + K+K+ +
Sbjct: 700 KGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIR 759
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY--SSILCAYSKQGQIVEAESTFNL 517
L+S + YG ME + +K + +Y ++I+ Y G++ EA +
Sbjct: 760 TKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLES 819
Query: 518 MKSSGCSPDVVTYTSMLDAYTAAGKM 543
M+ G P++VTYT ++ ++ AG +
Sbjct: 820 MQKEGIVPNLVTYTILMKSHIEAGDI 845
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 113/515 (21%), Positives = 203/515 (39%), Gaps = 71/515 (13%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI---PPSRST 142
+D+A L M + PD TY L+ + + ++AM I+ +L PP
Sbjct: 394 MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDD 453
Query: 143 YNNL--------------------------INACGSSGNWKEALNVCKKMTDNGVGPDLV 176
N+ A S N+ AL+ +KM + G P
Sbjct: 454 LGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPF 513
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
++N ++ + S +++ PD T IV++ L K D A I ++M
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
E P V Y+SII G++ E F ML GI+P ++Y ++ YA +G
Sbjct: 574 EELG--LRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYN 356
EA + E+ ++ RP +YT L++ + + +K + + + L PN+V Y
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRC-SQKGKIETVLSAAQ- 414
ALI + G + + M ++ I+ + ++ TLL+ R ++K K + ++ +
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 415 -----------------------------------MRGIKLNTVAYNSAIGSYLNVGEYD 439
+ I N +N+ I Y G D
Sbjct: 752 KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLD 811
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
+A +SM+K+ I + VTYTIL+ + A+ E + +YS++L
Sbjct: 812 EAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT---NCEPDQVMYSTLL 868
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ ++A + M+ SG +P+ +Y +L
Sbjct: 869 KGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/508 (20%), Positives = 210/508 (41%), Gaps = 68/508 (13%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
PD+ ++++ + ++ A +D ++ + PSR++ + +++ + + EA +
Sbjct: 129 PDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHC 188
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL-NIVIHCLV 221
+++ + G G L L ++A+ + + G P L + +C
Sbjct: 189 FEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFC 248
Query: 222 K-----------------------------LRQYDK------AIDIFNSMREKKSECHPD 246
K +++Y K A+ ++ M E+ E P
Sbjct: 249 KRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPC 308
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF- 305
+ + ++IH + G ++ F+ M+ +G++ ++ +Y+ ++G+Y G AL +F
Sbjct: 309 I--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFV 366
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
N ++ YT+L+ + + KA + + N + P+ ++Y L+
Sbjct: 367 NNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKC 426
Query: 366 GLLDDAIKILREMEQD--GIQPNV--------VSICTLLAACGR---------------- 399
L A+ IL+ + + GI P V V + +LL R
Sbjct: 427 HELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTA 486
Query: 400 -CSQKGKIETVLSAAQMRGIKLNTV--AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
CSQ+ I + +M + + +YNS I + L +++ D
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
TY I+++ CK + A + ++ M L L + +YSSI+ + KQG++VEAE TF
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 517 LMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
M SG PD + Y M++ Y G+++
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRID 634
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/507 (19%), Positives = 198/507 (39%), Gaps = 57/507 (11%)
Query: 46 QRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDA 105
+RG +F M+ Y + +Y +++ + + N + A L+ M E + D
Sbjct: 249 KRGCAAEAEALFDHMEVDGYYVDKV-MYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 165
+N LI+ + G + M++ + + TY+ +I + GN AL +
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL----R 363
Query: 166 MTDNGVGPDLVTHNI-----LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
+ N G + ++ N+ L+ F KA+ M I PD T +++ L
Sbjct: 364 LFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY--SVSGQIENCEAAFNMMLAEGI 278
K + A+ I S+ + +P V+ I + S+ G+I +A + +
Sbjct: 424 PKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVV 483
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
++ S + A + ++ G P SY S++ + +
Sbjct: 484 TTALCSQRNYIAALSR----------IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLAS 533
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+ +I+ P++ +Y +++ D A I+ ME+ G++P V +++ + G
Sbjct: 534 LVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLG 593
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ + + E + GI+ + +AY I +Y G D+A L + + K ++ S
Sbjct: 594 KQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSF 653
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
TYT+LISG KM + ++++M+
Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKMLE--------------------------------- 680
Query: 519 KSSGCSPDVVTYTSMLDAYTAAGKMNF 545
G SP+VV YT+++ + G F
Sbjct: 681 --DGLSPNVVLYTALIGHFLKKGDFKF 705
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 157/353 (44%), Gaps = 38/353 (10%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
IY+ +I + R+ +A F +M E +PD Y +IN + R G+ A +++++
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
++ + PS TY LI+ G ++ KM ++G+ P++V + L+ F +
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
Query: 192 SKALSYFELMKGTHIRPD----TTTLN-------------IVIH-----CLVKLRQYDKA 229
+ + F LM I+ D T L+ +++ L +L +
Sbjct: 704 KFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPL 763
Query: 230 IDIFNSMR-------------EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+ I +S+ + K P++ + +II Y +G+++ M E
Sbjct: 764 VSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKE 823
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
GI P++V+Y L+ ++ G + A+ +F + PD V Y++LL ++P A
Sbjct: 824 GIVPNLVTYTILMKSHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
+ ++++ + PN SY L+ + L +A+K++++M I P ++
Sbjct: 881 LALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSIN 933
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 136/329 (41%), Gaps = 16/329 (4%)
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
+++ NG+ PD + ++ ++ +A ++ + + + P + ++V+ L
Sbjct: 120 QRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQ 179
Query: 224 RQYDKAIDIFNSMREKKSE-----CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
++ +A F ++E+ S C HL G ++ M L +
Sbjct: 180 DRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNL 239
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA-R 337
Y +L + G EA +F+ ++ +G+ D V YT L+ Y + A R
Sbjct: 240 ------YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMR 293
Query: 338 GVFEMIKRN-KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
M++R+ +L P + +N LI + G+LD + +M + G+Q NV + ++ +
Sbjct: 294 LYLRMVERSFELDPCI--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGS 351
Query: 397 -CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
C + + ++ I N Y + I + G DKA+ L M I
Sbjct: 352 YCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMM 484
D +TY +L+ K + A+ ++ ++
Sbjct: 412 DHITYFVLLKMLPKCHELKYAMVILQSIL 440
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 133/327 (40%), Gaps = 38/327 (11%)
Query: 24 LLNRWVGRFARKN---FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLH 80
L +G F +K F F + L I+H ++ + + + ++ M R
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITL--------LSGLWRAMARKK 740
Query: 81 ARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR 140
R ++ + + + R KP ++L G G +AM ++ ++ +I P+
Sbjct: 741 KRQVIVEPGKEKLLQ-RLIRTKPLVSIPSSL----GNYGSKSFAMEVIGK-VKKSIIPNL 794
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
+N +I ++G EA N + M G+ P+LVT+ IL+ + A+ FE
Sbjct: 795 YLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE- 853
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
GT+ PD + ++ L ++ A+ + M +KS +P+ SY ++ S
Sbjct: 854 --GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEM--QKSGINPNKDSYEKLLQCLCYS 909
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
M A I P +++ L+ +EA +F + Q+G
Sbjct: 910 RLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG-------- 961
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNK 347
SLLN KP G+ +M+ +N+
Sbjct: 962 RSLLNC----TKP----GLLKMLNQNQ 980
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 148/302 (49%), Gaps = 3/302 (0%)
Query: 165 KMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
+M +GP T I+ + S + KA+ F M D + N ++ L K +
Sbjct: 116 RMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 175
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS 284
+ +KA ++F ++R + S D V+Y I++ + + + M+ GI P++ +
Sbjct: 176 RVEKAYELFRALRGRFS---VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
YN ++ + G + A F E+K+ D+V+YT++++ +G + + ++AR VF+ +
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
R + P++ +YNA+I +++A+ + EM + G +PNV + L+ +
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+ E ++ + G + N YN I Y E +KALGL++ M + TY ILI
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Query: 465 SG 466
SG
Sbjct: 413 SG 414
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 3/280 (1%)
Query: 80 HARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPS 139
+A + D+A LF M E C D ++N +++ ++ + A + LR
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGRFSVD 194
Query: 140 RSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFE 199
TYN ++N +AL V K+M + G+ P+L T+N +L F Q A +F
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
MK D T V+H + +A ++F+ M + P V +Y ++I +
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM--IREGVLPSVATYNAMIQVLCK 312
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
+EN F M+ G +P++ +YN L+ G + ++ G P+ +
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
Y ++ Y + +KA G+FE + PNL +YN LI
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 146/328 (44%), Gaps = 2/328 (0%)
Query: 212 TLNIVIHCLVKLRQY-DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF 270
T N+V L +L + KA+ F+ + E D S+ I + + +
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
+ M + I PS ++ + YA+ G +A+ +F + ++G D+ S+ ++L+ +S
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
++ +KA +F + R + + V+YN +++ + A+++L+EM + GI PN+ +
Sbjct: 175 KRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 391 CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
T+L R Q + R +++ V Y + + + GE +A ++ M +
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
+ + TY +I CK A+ EEM+ + Y+ ++ G+
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 511 AESTFNLMKSSGCSPDVVTYTSMLDAYT 538
E M++ GC P+ TY M+ Y+
Sbjct: 354 GEELMQRMENEGCEPNFQTYNMMIRYYS 381
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 2/206 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN M++ R +I A F EM++ C+ D TY +++ G AG+ + A N+ D+M+
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R + PS +TYN +I N + A+ + ++M G P++ T+N+L+ ++S
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+ + M+ P+ T N++I + + +KA+ +F M +C P++ +Y
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM--GSGDCLPNLDTYNI 410
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGI 278
+I V + E+ A N A+ I
Sbjct: 411 LISGMFVRKRSEDMVVAGNQAFAKEI 436
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 150/345 (43%), Gaps = 7/345 (2%)
Query: 193 KALSYFELMKGTHIR--PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
KAL +F + H D ++ ++ I +L + + + MR + P ++
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLR--IGPSPKTF 129
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
+ Y+ +G+ + F M G + S+N ++ ++A +F ++
Sbjct: 130 AIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG 189
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
F D V+Y +LN + ++ KA V EM++R + PNL +YN ++ + G +
Sbjct: 190 R-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG-INPNLTTYNTMLKGFFRAGQIR 247
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
A + EM++ + +VV+ T++ G + + V G+ + YN+ I
Sbjct: 248 HAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
+ A+ +++ M ++ + + TY +LI G ++ M+ M +
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ + Y+ ++ YS+ ++ +A F M S C P++ TY ++
Sbjct: 368 PNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 2/219 (0%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN+++ R +A + EM E P+ TYN ++ RAGQ R A +M
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ TY +++ G +G K A NV +M GV P + T+N ++
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
A+ FE M P+ TT N++I L ++ + ++ M + C P+ +Y
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG--CEPNFQTYNM 375
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+I YS ++E F M + P++ +YN L+
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
++ P+ ++ + + Y S G D A+K+ M + G ++ S T+L C K
Sbjct: 121 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL--CKSK--- 175
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
+KA L++++R + D+VTY ++++G
Sbjct: 176 ------------------------------RVEKAYELFRALRGR-FSVDTVTYNVILNG 204
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
C + + +AL ++EM+ + + Y+++L + + GQI A F MK C D
Sbjct: 205 WCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEID 264
Query: 527 VVTYTSMLDAYTAAGKM 543
VVTYT+++ + AG++
Sbjct: 265 VVTYTTVVHGFGVAGEI 281
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 194/423 (45%), Gaps = 15/423 (3%)
Query: 86 IDQARGLF--FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPP---SR 140
+D A LF + Q W P E Y L + + + ++ ++M++ + S
Sbjct: 185 VDAALSLFRWAKKQPWYL-PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSF 243
Query: 141 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFEL 200
+ YN +I + + A KK ++G D T+N L+ F + KA +E
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 201 MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
M+ T D +T ++I L K + D A +F M+E+K P ++S++ +
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK--LRPSFSVFSSLVDSMGKA 361
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G+++ + M G +PS + +L+ +YA G AL +++E+K++GFRP+ Y
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
T ++ ++ +S K + A VF+ +++ P +Y+ L++ + +G +D A+KI M
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 381 DGIQPNV---VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
G++P + +S+ TLLA GKI + A G ++ A + + Y+
Sbjct: 482 AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAM---GYSVDVCA-SDVLMIYIKDAS 537
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
D AL + M IK ++ L K Y A +E ++H V +Y+S
Sbjct: 538 VDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTS 597
Query: 498 ILC 500
IL
Sbjct: 598 ILA 600
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 171/389 (43%), Gaps = 11/389 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN +I+ A+ +++ A F + QE CK D +TYN L+ G A I + M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ STY +I + SG A + ++M + + P + L+ + +
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLD 365
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
++ + M+G RP T +I K + D A+ +++ M KKS P+ YT
Sbjct: 366 TSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEM--KKSGFRPNFGLYTM 423
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
II ++ SG++E F M G P+ +Y+ L+ +A G A+ ++N + G
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG 483
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
RP + SY SLL + A + +K ++ + + L+ Y + +D A+
Sbjct: 484 LRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLAL 542
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRC----SQKGKIETVLSAAQMRGIKLNTVAYNSA 428
K LR M GI+ N I L +C + S + +ET++ +A K++ V Y S
Sbjct: 543 KWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAG----KVDLVLYTSI 598
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ + + DK L + K KA +
Sbjct: 599 LAHLVRCQDEDKERQLMSILSATKHKAHA 627
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 137/314 (43%), Gaps = 4/314 (1%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
+ +I L + G ++ +FQ MK +R +++ ++ + R+D + ++ E
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMK-ERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME 373
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
MQ + +P A + +LI+++ +AG+ A+ + D+M ++ P+ Y +I + SG
Sbjct: 374 MQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+ A+ V K M G P T++ LL Q A+ + M +RP ++
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYIS 493
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
++ L R D A I + E K+ + V + ++ +Y ++ M +
Sbjct: 494 LLTLLANKRLVDVAGKI---LLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGS 550
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
GIK + L + +G+ A + + + + D+V YTS+L R Q K
Sbjct: 551 SGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDK 610
Query: 336 ARGVFEMIKRNKLK 349
R + ++ K K
Sbjct: 611 ERQLMSILSATKHK 624
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 120/254 (47%)
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
S +YN ++ A + A F + +++G + D +Y +L+ + P KA ++
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRC 400
E +++ + +Y +I + +G LD A K+ ++M++ ++P+ +L+ + G+
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 401 SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
+ V Q G + + + S I SY G+ D AL L+ M+K + + Y
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
T++I K K A++ ++M + YS +L ++ GQ+ A +N M +
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 521 SGCSPDVVTYTSML 534
+G P + +Y S+L
Sbjct: 482 AGLRPGLSSYISLL 495
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
AQ G K++T YN+ + +LN G KA +Y+SM K D TY ++I K +
Sbjct: 269 AQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGR 328
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
A ++M KL S V+SS++ + K G++ + + M+ G P + S
Sbjct: 329 LDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVS 388
Query: 533 MLDAYTAAGKMN 544
++D+Y AGK++
Sbjct: 389 LIDSYAKAGKLD 400
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
L+ Y I S G D A L++ M+++K++ ++ L+ K + ++
Sbjct: 311 LDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKV 370
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
EM S ++ S++ +Y+K G++ A ++ MK SG P+ YT +++++
Sbjct: 371 YMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
Query: 540 AGKMNFEPLKYED----GF------WKCMLE 560
+GK+ ++D GF + C+LE
Sbjct: 431 SGKLEVAMTVFKDMEKAGFLPTPSTYSCLLE 461
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 133/567 (23%), Positives = 241/567 (42%), Gaps = 95/567 (16%)
Query: 69 RNDIYNMMIRLHARHNRIDQ---ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
RNDI +++ +L R + + AR +F +Q +PD +N L+ ++
Sbjct: 49 RNDI-SLLTKLTQRLSDLGAIYYARDIFLSVQ----RPDVFLFNVLMRGFSVNESPHSSL 103
Query: 126 NIMDDMLRAA-IPPSRSTYNNLINAC--------GSSGNWKEALNVC------------- 163
++ + ++ + P+ STY I+A G + + ++ C
Sbjct: 104 SVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKM 163
Query: 164 ----------KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTTT 212
+K+ D D + N ++S ++ Y +++ F +L+ + R DTTT
Sbjct: 164 YFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTT 223
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
L ++ + +L++ + I + K+ C+ T I LYS G+I+ A F
Sbjct: 224 LLDILPAVAELQELRLGMQIHS--LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR- 280
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR------------------ 314
E KP IV+YNA++ Y ++G + +L +F E+ +G R
Sbjct: 281 ---EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 315 ----------PDIVSY----TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
+ +S+ T+L Y + + + AR +F+ + +L S+NA+I
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD----ESPEKSLPSWNAMIS 393
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
Y NGL +DAI + REM++ PN V+I +L+AC + + V + +
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM 480
+ + IG Y G +A L+ M KK + VT+ +ISG + EAL+
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKK----NEVTWNTMISGYGLHGQGQEALNIF 509
Query: 481 EEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN-LMKSSGCSPDVVTYTSMLDAYTA 539
EM++ + + + +L A S G + E + FN ++ G P V Y M+D
Sbjct: 510 YEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGR 569
Query: 540 AGKMN-----FEPLKYEDG--FWKCML 559
AG + E + E G W+ +L
Sbjct: 570 AGHLQRALQFIEAMSIEPGSSVWETLL 596
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 193/410 (47%), Gaps = 36/410 (8%)
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
N +I C SG+ AL V M + +++L+ K S+ +A F+ +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNT---ITWNSLLIGISKDPSRMMEAHQLFDEIP- 120
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI 263
PDT + NI++ C V+ ++KA F+ M K D S+ ++I Y+ G++
Sbjct: 121 ---EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK------DAASWNTMITGYARRGEM 171
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
E F M+ + + VS+NA++ Y G ++A F G +V++T++
Sbjct: 172 EKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAM 223
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
+ Y +++K + A +F+ + NK NLV++NA+I Y N +D +K+ R M ++GI
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNK---NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 384 QPNVVSICTLLAACGRCS--QKGK-IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
+PN + + L C S Q G+ I ++S + + + A S I Y GE
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN---DVTALTSLISMYCKCGELGD 337
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A L++ M+KK D V + +ISG + +AL EM+ K+ + ++L
Sbjct: 338 AWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLL 393
Query: 501 AYSKQGQIVEAESTF-NLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLK 549
A + G + + F ++++ P YT M+D AGK+ E LK
Sbjct: 394 ACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE-EALK 442
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 156/328 (47%), Gaps = 25/328 (7%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N MI +AR +++AR LF+ M E + ++NA+I+ + G A +
Sbjct: 158 WNTMITGYARRGEMEKARELFYSMME----KNEVSWNAMISGYIECGDLEKASHFFK--- 210
Query: 133 RAAIPPSRST--YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
+ P R + +I + + A + K MT V +LVT N ++S + S+
Sbjct: 211 ---VAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSR 264
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
L F M IRP+++ L+ + +L I + + K + C+ DV +
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCN-DVTAL 322
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
TS+I +Y G++ + F +M K +V++NA++ YA HG +AL +F E+
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMK----KKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFE-MIKRNKLKPNLVSYNALIDAYGSNGLLD 369
N RPD +++ ++L A + FE M++ K++P Y ++D G G L+
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAAC 397
+A+K++R M +P+ TLL AC
Sbjct: 439 EALKLIRSMP---FRPHAAVFGTLLGAC 463
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/549 (19%), Positives = 220/549 (40%), Gaps = 60/549 (10%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQE 98
++ + + G++E F+W + Y + R D L EM +
Sbjct: 49 LILDQKSASGALE----TFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPD 104
Query: 99 -WRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
PD + +I GRA + ++++D + + I PS +N++++ K
Sbjct: 105 SIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL-----VK 159
Query: 158 EALNVC-----KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTT 212
E +++ +KM +G+ D+ T+ IL+ ++ ++MK + + P+
Sbjct: 160 EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVV 219
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
N ++H L K + +A + + M+E P+ V++ +I Y ++
Sbjct: 220 YNTLLHALCKNGKVGRARSLMSEMKE------PNDVTFNILISAYCNEQKLIQSMVLLEK 273
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
+ G P +V+ ++ G EAL V ++ G + D+V+ +L+ Y K
Sbjct: 274 CFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGK 333
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
+ A+ F ++R PN+ +YN LI Y G+LD A+ +M+ D I+ N + T
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 393 L---LAACGRCSQKGKI-ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
L L+ GR KI E + + + G +++ YN I + ++ AL M
Sbjct: 394 LIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKM 451
Query: 449 RKKKIKADSVTYTI---------------------------LISGSCKMSKYG------E 475
K +A ++ + +I C + +Y E
Sbjct: 452 EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEE 511
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
+L + +M+ +++++ + KQ +++ M GC PD +Y +L+
Sbjct: 512 SLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLE 571
Query: 536 AYTAAGKMN 544
G +
Sbjct: 572 ELCVKGDIQ 580
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 127/310 (40%), Gaps = 14/310 (4%)
Query: 83 HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 142
R+ +A + ++ K D N L+ + G+ R A +M R P+ T
Sbjct: 296 EGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVET 355
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
YN LI G AL+ M + + + T N L+ G + L E+M+
Sbjct: 356 YNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQ 415
Query: 203 ------GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHL 256
G I P N VI+ K +++ A++ M + P V + +
Sbjct: 416 DSDTVHGARIDP----YNCVIYGFYKENRWEDALEFLLKMEK----LFPRAVDRSFKLIS 467
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
G +++ + A++ M+ EG PSI+ + L+ Y+ HG +E+L + N++ G+ P
Sbjct: 468 LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPR 527
Query: 317 IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
++ +++ + + K E + P+ SYN L++ G + A +
Sbjct: 528 SSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFS 587
Query: 377 EMEQDGIQPN 386
M + I P+
Sbjct: 588 RMVEKSIVPD 597
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 6/288 (2%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N +++ + ++ A+ F EM+ P+ ETYN LI + G A++ +DM
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV--GPDLVTHNILLSAFKSGSQY 191
AI + +T+N LI G + L + + M D+ G + +N ++ F +++
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRW 441
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
AL + L+K + P + + L + D ++ M + P ++
Sbjct: 442 EDALEF--LLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV--PSIIVSH 497
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+IH YS G+IE N M+ G P ++NA++ + + ++ +
Sbjct: 498 CLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAER 557
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
G PD SY LL QKA +F + + P+ +++L+
Sbjct: 558 GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 157/328 (47%), Gaps = 5/328 (1%)
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSE-CHPDVVSYTSIIHLYSVSGQIENCEAAFNMML 274
++ L K+RQ+ + MR+ E P++ + ++ ++ + ++ + M
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL--FVVLMRRFASANMVKKAVEVLDEMP 194
Query: 275 AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQ 334
G++P + L+ A +G KEA VF ++++ F P++ +TSLL + R K
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLM 253
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
+A+ V +K L+P++V + L+ Y G + DA ++ +M + G +PNV L+
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 395 AACGRCSQK-GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
A R ++ + V + G + + V Y + I + G DK + MRKK +
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
VTY ++ K ++ E L +E+M +Y+ ++ K G++ EA
Sbjct: 374 MPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVR 433
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+N M+++G SP V T+ M++ +T+ G
Sbjct: 434 LWNEMEANGLSPGVDTFVIMINGFTSQG 461
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 204/442 (46%), Gaps = 13/442 (2%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
+++ +++R A N + +A + EM ++ +PD + L++A + G + A + +D
Sbjct: 168 ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED 227
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
M R PP+ + +L+ G EA V +M + G+ PD+V LLS + +
Sbjct: 228 M-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL-RQYDKAIDIFNSMREKKSECHPDVVS 249
+ A M+ P+ ++I L + ++ D+A+ +F M ++ C D+V+
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM--ERYGCEADIVT 344
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
YT++I + G I+ + + M +G+ PS V+Y ++ A+ +E L + ++K
Sbjct: 345 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
+ G PD++ Y ++ + + ++A ++ ++ N L P + ++ +I+ + S G L
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLI 464
Query: 370 DAIKILREMEQDGI--QPNVVSICTLLAACGRCSQKGKIETVLS--AAQMRGIKLNTVAY 425
+A +EM GI P ++ +LL R + + V S + + +LN A+
Sbjct: 465 EACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAW 524
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMH 485
I + G +A M + + TY L+ G K+ A E++
Sbjct: 525 TIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKV-- 582
Query: 486 LKLPVSKEVYSSILCAYSKQGQ 507
+K+ +E+ + Y K+G+
Sbjct: 583 VKMASEREMSFKM---YKKKGE 601
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 201/471 (42%), Gaps = 51/471 (10%)
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN-------WK--- 157
Y L N H R + A+N LR + +++ CG +GN W
Sbjct: 71 YRILRNHHSRVPKLELALNESGIDLRPGL------IIRVLSRCGDAGNLGYRFFLWATKQ 124
Query: 158 ----EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH---IRPDT 210
+ VCK M ++LS + Q+ E M+ T+ I P+
Sbjct: 125 PGYFHSYEVCKSMV------------MILSKMR---QFGAVWGLIEEMRKTNPELIEPEL 169
Query: 211 TTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF 270
+++ KA+++ + M K PD + ++ +G ++ F
Sbjct: 170 FV--VLMRRFASANMVKKAVEVLDEM--PKYGLEPDEYVFGCLLDALCKNGSVKEASKVF 225
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
M E P++ + +L+ + G EA V ++K+ G PDIV +T+LL+ Y +
Sbjct: 226 EDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHA 284
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAY-GSNGLLDDAIKILREMEQDGIQPNVVS 389
K A + +++ +PN+ Y LI A + +D+A+++ EME+ G + ++V+
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVT 344
Query: 390 ICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR 449
L++ + K +VL + +G+ + V Y + ++ ++++ L L + M+
Sbjct: 345 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 450 KKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIV 509
++ D + Y ++I +CK+ + EA+ EM L + + ++ ++ QG ++
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLI 464
Query: 510 EAESTFNLMKSSGC--SPDVVTYTSMLDAYTAAGKMNFEPLKYEDGFWKCM 558
EA + F M S G +P T S+L+ K L+ W C+
Sbjct: 465 EACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDK-----LEMAKDVWSCI 510
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 39/250 (15%)
Query: 63 QRNYCARNDIYNMMIRLHAR-HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
+R + + Y ++I+ R R+D+A +F EM+ + C+ D TY ALI+ + G
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI 358
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN-- 179
+++DDM + + PS+ TY ++ A ++E L + +KM G PDL+ +N
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 180 ---------------------------------ILLSAFKSGSQYSKALSYFELM--KGT 204
I+++ F S +A ++F+ M +G
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI- 263
P TL +++ LV+ + + A D+++ + K S C +V ++T IH G +
Sbjct: 479 FSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVK 538
Query: 264 ENCEAAFNMM 273
E C +MM
Sbjct: 539 EACSYCLDMM 548
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 191/413 (46%), Gaps = 14/413 (3%)
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN---NLINACGSSGNWKEALNV 162
+TY++++ RA + ++M D LR + PP + N +L+ G +G ++ ++ +
Sbjct: 84 DTYHSILFKLSRARAFDPVESLMAD-LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRI 142
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH-IRPDTTTLNIVIHCLV 221
++ D GV + + N LL+ ++ + F+ K + I P+ T N+++ L
Sbjct: 143 FLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALC 202
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K + A + + + P++V+YT+I+ Y G +E+ + ML G P
Sbjct: 203 KKNDIESAYKVLDEI--PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPD 260
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+Y L+ Y G EA V +++++N P+ V+Y ++ A + +K +AR +F+
Sbjct: 261 ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL---LAACG 398
+ P+ +IDA + +D+A + R+M ++ P+ + TL L G
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
R ++ K+ + + + YN+ I GE +A L+ M ++K K ++
Sbjct: 381 RVTEARKLFDEFEKGSIPSL----LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 436
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEA 511
TY +LI G K E + +EEM+ + +K + + K G+ +A
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 168/370 (45%), Gaps = 7/370 (1%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQE-WRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
N ++ + ++ R D +F +E + P+ T N L+ A + A ++D++
Sbjct: 159 NTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIP 218
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P+ TY ++ + G+ + A V ++M D G PD T+ +L+ + ++S
Sbjct: 219 SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A + + M+ I P+ T ++I L K ++ +A ++F+ M E+ PD
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF--MPDSSLCCK 336
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I +++ + ML P + L+ G EA +F+E ++ G
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-G 395
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P +++Y +L+ + +A +++ + K KPN +YN LI+ NG + + +
Sbjct: 396 SIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
++L EM + G PN + L + ++ ++S A M G K++ ++ + +
Sbjct: 456 RVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFLKKF 514
Query: 433 LNVGEYDKAL 442
GE DK +
Sbjct: 515 --AGELDKGV 522
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
GI P+I + N LV A + A V +EI G P++V+YT++L Y + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
+ V E + P+ +Y L+D Y G +A ++ +ME++ I+PN V+ ++ A
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
+ + G+ + R ++ I + + D+A GL++ M K D
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
+ + LI CK + EA +E +P S Y++++ ++G++ EA ++
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 517 LMKSSGCSPDVVTYTSMLDAYTAAG 541
M C P+ TY +++ + G
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNG 449
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 6/306 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
Y ++ + ++ A+ + EM + PDA TY L++ + + G++ A +MDDM
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ I P+ TY +I A EA N+ +M + PD ++ A +
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A + M + PD L+ +IH L K + +A +F+ EK S P +++Y +
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGS--IPSLLTYNT 405
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I G++ ++ M KP+ +YN L+ + +G KE + V E+ + G
Sbjct: 406 LIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
P+ ++ L + K + A + M N K + S+ + + G LD +
Sbjct: 466 CFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFLKKFA--GELDKGV 522
Query: 373 KILREM 378
L+E+
Sbjct: 523 LPLKEL 528
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 417 GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK-KIKADSVTYTILISGSCKMSKYGE 475
G+K + + N+ + + +D ++K+ ++ I + T +L+ CK +
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 476 ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
A ++E+ + L + Y++IL Y +G + A+ M G PD TYT ++D
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 536 AYTAAGKMN 544
Y G+ +
Sbjct: 270 GYCKLGRFS 278
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 220/496 (44%), Gaps = 24/496 (4%)
Query: 58 QWMKNQRNYCARND---IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
+W +Q++Y + D I+N++ + + + ++E C+ + Y+ ++
Sbjct: 70 KWFSDQKDYDQKEDPEAIFNVLDYI------LKSSLDRLASLRESVCQTKSFDYDDCLSI 123
Query: 115 HGR-------AGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
H G+ A+ + M+ + + P T+N+L+N +G ++A + ++M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 168 DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK---LR 224
+ G P+ V++N L+ S + KAL F M IRP+ T NI++H L + +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 225 QYDKAI--DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
+K + +I +S ++ D+V T ++ +G + + M + +
Sbjct: 244 NNNKKLLEEILDS---SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
V YN ++ + G A ++ + G PD+ +Y +L++A + K +A +
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
++ + P+ +SY +I +G ++ A + L M + + P V+ ++ GR
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 403 KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
+VL+ G+K N N+ I Y+ G A + MR KI D+ TY +
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 463 LISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
L+ +C + A +EM+ Y+ ++ +G++ +AES + ++++G
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Query: 523 CSPDVVTYTSMLDAYT 538
+ D V + + YT
Sbjct: 541 ITIDHVPFLILAKKYT 556
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 180/394 (45%), Gaps = 11/394 (2%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG-----QWRWAMNI 127
YN +I+ N +D+A LF M ++ +P+ T N +++A + G + I
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEI 253
Query: 128 MDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKS 187
+D +A P L+++C +GN +AL V K+M+ V D V +N+++ S
Sbjct: 254 LDSS-QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 188 GSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDV 247
A + M + PD T N +I L K ++D+A D+ +M + PD
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM--QNGGVAPDQ 370
Query: 248 VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
+SY II + G + ML + P ++ +N ++ Y +G AL V N
Sbjct: 371 ISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNL 430
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
+ G +P++ + +L++ Y + + A V ++ K+ P+ +YN L+ A + G
Sbjct: 431 MLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGH 490
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNS 427
L A ++ EM + G QP++++ L+ + K E++LS Q GI ++ V +
Sbjct: 491 LRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLI 550
Query: 428 AIGSYLNVGEYDKALGLYK---SMRKKKIKADSV 458
Y + +A +YK + R + + S+
Sbjct: 551 LAKKYTRLQRPGEAYLVYKKWLATRNRGVSCPSI 584
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 12/258 (4%)
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
G AL + ++ +G P ++++ LLN ++ +KA G+ ++ PN VS
Sbjct: 134 QGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVS 193
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI-------- 406
YN LI S +D A+ + M + GI+PN V+ ++ A QKG I
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL---CQKGVIGNNNKKLL 250
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
E +L ++Q L+ V + S G +AL ++K M +K + ADSV Y ++I G
Sbjct: 251 EEILDSSQANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRG 309
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
C A FM +M+ + Y++++ A K+G+ EA M++ G +PD
Sbjct: 310 LCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPD 369
Query: 527 VVTYTSMLDAYTAAGKMN 544
++Y ++ G +N
Sbjct: 370 QISYKVIIQGLCIHGDVN 387
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 155/361 (42%), Gaps = 48/361 (13%)
Query: 229 AIDIFNSMREK----KSECHPDVVS-YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIV 283
++D S+RE KS + D +S ++SI+ + G+++ M+ G+ P ++
Sbjct: 98 SLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLI 157
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMI 343
++N L+ G ++A + E+++ G P+ VSY +L+ KA +F +
Sbjct: 158 THNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM 217
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV---VSICTLLAACGRC 400
+ ++PN V+ N ++ A G++ + K L E D Q N + ICT+L C
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILM--DSC 275
Query: 401 SQKGKIETVL--------------------------SAAQM------------RGIKLNT 422
+ G + L S+ M RG+ +
Sbjct: 276 FKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDV 335
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
YN+ I + G++D+A L+ +M+ + D ++Y ++I G C A F+
Sbjct: 336 FTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLS 395
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
M+ L +++ ++ Y + G A S NLM S G P+V T +++ Y G+
Sbjct: 396 MLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGR 455
Query: 543 M 543
+
Sbjct: 456 L 456
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 62 NQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
+Q+N A + +YN++IR + A G +M + PD TYN LI+A + G++
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 122 RWAMNIMDDMLRAAIPPSRSTY-----------------------------------NNL 146
A ++ M + P + +Y N +
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 147 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
I+ G G+ AL+V M GV P++ T+N L+ + G + A M+ T I
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI 471
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
PDTTT N+++ L A +++ M + C PD+++YT ++ G+++
Sbjct: 472 HPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG--CQPDIITYTELVRGLCWKGRLKKA 529
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
E+ + + A GI V + L Y EA LV+ K R VS S+LN
Sbjct: 530 ESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYK--KWLATRNRGVSCPSILN 586
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/537 (23%), Positives = 219/537 (40%), Gaps = 55/537 (10%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRC------KPDAETYN 109
VF+ +K + + YN+ I +D A LF EM+E PD TYN
Sbjct: 234 VFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 110 ALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN 169
+LI+ G+ + A+ + D++ + P STY LI C S +A+ + +M N
Sbjct: 294 SLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYN 353
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
G PD + +N LL + ++A FE M +R T NI+I L + + +
Sbjct: 354 GFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAG 413
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
+F +++K D ++++ + G++E M G +V+ ++L+
Sbjct: 414 FTLFCDLKKKGQ--FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK 349
+ G + I++ P+++ + + + A ++PQ K
Sbjct: 472 IGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEA--SLKRPQS--------KDKDYT 521
Query: 350 PNLVSYNALIDAYGSNGLLDDAIKI--LREMEQD-----------GIQPNVVSICTLLAA 396
P S + +D G DD + ME D Q N LA
Sbjct: 522 PMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLAR 581
Query: 397 CGRCSQKGK------IETVLSAAQMRG-----------------IKLNTVAYNSAIGSYL 433
R K + T LS +G L + YNS + S++
Sbjct: 582 GQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFV 641
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
G + A G+ M + AD TY ++I G KM + A + ++ + +
Sbjct: 642 KKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIV 701
Query: 494 VYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKY 550
+Y++++ A K ++ EA F+ MKS+G +PDVV+Y +M++ + AGK+ E KY
Sbjct: 702 MYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK-EAYKY 757
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 201/454 (44%), Gaps = 25/454 (5%)
Query: 40 LIKELTQRGSIEHCNLV--FQWMKNQR-NYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
++ ++ +R SI+ + F+W + R Y Y+ + R R + + L M
Sbjct: 59 VVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSM 118
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+E D L+++ R+G++ A+ ++D M + S Y++++ A
Sbjct: 119 KEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHEL 178
Query: 157 KEALNVCKKM-------TDNGVG--------PDLVTHNILLSAFKSGSQYSKALSYFELM 201
+ AL++ K+ +D+ G P V N LL + S+ FE +
Sbjct: 179 RLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKL 238
Query: 202 KG-THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS----ECHPDVVSYTSIIHL 256
KG + DT + NI IH D A+ +F M+E+ S PD+ +Y S+IH+
Sbjct: 239 KGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHV 298
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
+ G+ ++ ++ + G +P +Y L+ +A+ ++ E++ NGF PD
Sbjct: 299 LCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPD 358
Query: 317 IVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
+ Y LL+ +++K +A +FE + + ++ + +YN LID NG + +
Sbjct: 359 TIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFC 418
Query: 377 EMEQDGIQPNVVSICTL-LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
++++ G + ++ + L C +G ++ V + RG ++ V +S + +
Sbjct: 419 DLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLV-EEMETRGFSVDLVTISSLLIGFHKQ 477
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
G +D L K +R+ + + + + + S K
Sbjct: 478 GRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 185/439 (42%), Gaps = 31/439 (7%)
Query: 121 WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI 180
+RW + LR S + Y+ + +G E ++ M ++GV D I
Sbjct: 78 FRWCYS-----LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKI 132
Query: 181 LLSAFKSGSQYSKALSYFELMK--GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
LL + ++ AL + M+ G + P + + V+ LVK + A+ I + E
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNP--SVYDSVLIALVKKHELRLALSILFKLLE 190
Query: 239 KKSECHPD-------VVSY---TSIIHLYSVSGQIENCEAAFNMMLAE-----GIKPSIV 283
S+ H D +VSY T ++ V + + + F + + K
Sbjct: 191 A-SDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTW 249
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQ------NGFRPDIVSYTSLLNAYGRSQKPQKAR 337
SYN + + G AL +F E+K+ + F PDI +Y SL++ K + A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
V++ +K + +P+ +Y LI + +DDA++I EM+ +G P+ + LL
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ + + + G++ + YN I G + L+ ++KK D+
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL 517
+T++I+ C+ K A+ +EEM V SS+L + KQG+ E
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH 489
Query: 518 MKSSGCSPDVVTYTSMLDA 536
++ P+V+ + + ++A
Sbjct: 490 IREGNLVPNVLRWNAGVEA 508
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 166/386 (43%), Gaps = 41/386 (10%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
F + +L + G +E + + M+ + I +++I H + R D L
Sbjct: 431 TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFH-KQGRWDWKEKLMKH 489
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
++E P+ +NA + A + Q + D + PS+ ++ ++++ GS +
Sbjct: 490 IREGNLVPNVLRWNAGVEASLKRPQSK-------DKDYTPMFPSKGSFLDIMSMVGSEDD 542
Query: 156 WKEALNVCKKMTDN--GVGP--DLVTHNILLSAFKSGSQYSKALSYFELMKGTHI--RPD 209
A V M D+ P D + H Q ++ F L +G + +PD
Sbjct: 543 GASAEEV-SPMEDDPWSSSPYMDQLAH-----------QRNQPKPLFGLARGQRVEAKPD 590
Query: 210 TTTLNIVIHCL-VKLRQYD-----KAIDIFNSMREKKSECHPDVVSYT--SIIHLYSVSG 261
+ ++++ L + L + D K +IFN M D+ SYT S++ + G
Sbjct: 591 SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVT------DLTSYTYNSMMSSFVKKG 644
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+ + M I +YN ++ G A V + + + G DIV Y
Sbjct: 645 YFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYN 704
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+L+NA G++ + +A +F+ +K N + P++VSYN +I+ G L +A K L+ M
Sbjct: 705 TLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA 764
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIE 407
G PN V+ T+L G+ +K + +
Sbjct: 765 GCLPNHVTD-TILDYLGKEMEKARFK 789
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 181/454 (39%), Gaps = 61/454 (13%)
Query: 70 NDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMD 129
N Y ++I+ + R+D A ++ EMQ PD YN L++ +A + A + +
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383
Query: 130 DMLRAAIPPSRSTYNNLINA--------------CG---------------------SSG 154
M++ + S TYN LI+ C G
Sbjct: 384 KMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
+ A+ + ++M G DLVT + LL F ++ + ++ ++ P+ N
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWN 503
Query: 215 IVIHCLVKLRQY-DKA-----------IDIFNSMREKKSECHPDVVS------YTSIIHL 256
+ +K Q DK +DI + + + + VS ++S ++
Sbjct: 504 AGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYM 563
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSY-----NALVGAYAAHGMGKEALLVFNEIKQN 311
++ Q + F + + ++ S+ N + Y + G A +F EI
Sbjct: 564 DQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLF-EIFNG 622
Query: 312 GFRPDIVSYT--SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
D+ SYT S+++++ + Q ARGV + + N ++ +YN +I G G D
Sbjct: 623 MGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRAD 682
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
A +L + + G ++V TL+ A G+ ++ + + + GI + V+YN+ I
Sbjct: 683 LASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMI 742
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
G+ +A K+M + VT TIL
Sbjct: 743 EVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 151/302 (50%), Gaps = 5/302 (1%)
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
+V+ Y + ++ S +E E F+ ML GIKP ++ ++ +G+ K A+ F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
++ G PD V+ ++++AYGR+ A +++ + K + + V+++ LI YG +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
G D + I EM+ G++PN+V L+ + GR + + + + G N Y
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY-GEALSFMEEMM 484
+ + +Y D AL +Y+ M++K + + Y L+S C ++Y EA ++M
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIFQDMK 412
Query: 485 HLKL--PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
+ + P S +SS++ Y+ G++ EAE+ M+ +G P + TS++ Y A +
Sbjct: 413 NCETCDPDSW-TFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQ 471
Query: 543 MN 544
++
Sbjct: 472 VD 473
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 158/336 (47%), Gaps = 12/336 (3%)
Query: 127 IMDDMLRAAIPPSRST--YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA 184
+++++L + PSR YN + S + +++ + +M + G+ PD T ++S
Sbjct: 161 VLNNLLET-MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 185 FKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECH 244
+ +A+ +FE M PD T+ +I + D A+ +++ R +K
Sbjct: 220 ARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI- 278
Query: 245 PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV 304
D V+++++I +Y VSG + C + M A G+KP++V YN L+ + +A ++
Sbjct: 279 -DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGS 364
+ ++ NGF P+ +Y +L+ AYGR++ A ++ +K L ++ YN L+
Sbjct: 338 YKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCAD 397
Query: 365 NGLLDDAIKILREMEQ-DGIQPN---VVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
N +D+A +I ++M+ + P+ S+ T+ A GR S+ E L + G +
Sbjct: 398 NRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA---EAALLQMREAGFEP 454
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
S I Y + D + + + + I D
Sbjct: 455 TLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 175/407 (42%), Gaps = 52/407 (12%)
Query: 135 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP--------------DLVTHNI 180
A P+ + ++I G ++A+ MT+ P +++ +N+
Sbjct: 121 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 180
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
+ F+ K+ F+ M I+PD T +I C + +A++ F M
Sbjct: 181 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM--SS 238
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
C PD V+ ++I Y +G ++ + ++ E + V+++ L+ Y G
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
L ++ E+K G +P++V Y L+++ GR+++P +A+ +++ + N PN +Y AL+
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
AYG DDA+ I REM++ +G+ L
Sbjct: 359 AYGRARYGDDALAIYREMKE-----------------------------------KGLSL 383
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRK-KKIKADSVTYTILISGSCKMSKYGEALSF 479
+ YN+ + + D+A +++ M+ + DS T++ LI+ + EA +
Sbjct: 384 TVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAA 443
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
+ +M + V +S++ Y K Q+ + TF+ + G +PD
Sbjct: 444 LLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 131/283 (46%), Gaps = 5/283 (1%)
Query: 58 QWMKNQRNYCARNDIYNM--MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
+W + ++ D M MI + R +D A L+ + + + DA T++ LI +
Sbjct: 231 EWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
G +G + +NI ++M + P+ YN LI++ G + +A + K + NG P+
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS 235
T+ L+ A+ AL+ + MK + N ++ R D+A +IF
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
Query: 236 MREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAH 295
M+ ++ C PD +++S+I +Y+ SG++ EAA M G +P++ +++ Y
Sbjct: 411 MKNCET-CDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKA 469
Query: 296 GMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
+ + F+++ + G PD LLN +Q P + G
Sbjct: 470 KQVDDVVRTFDQVLELGITPDDRFCGCLLNVM--TQTPSEEIG 510
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 152/334 (45%), Gaps = 7/334 (2%)
Query: 54 NLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALIN 113
N + + MK R +YN+ +++ + ++++ LF EM E KPD T+ +I+
Sbjct: 163 NNLLETMKPSREVI----LYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIIS 218
Query: 114 AHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP 173
+ G + A+ + M P T +I+A G +GN AL++ +
Sbjct: 219 CARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI 278
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
D VT + L+ + Y L+ +E MK ++P+ N +I + + ++ +A I+
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
+ + P+ +Y +++ Y + ++ A + M +G+ +++ YN L+ A
Sbjct: 339 KDL--ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCA 396
Query: 294 AHGMGKEALLVFNEIKQ-NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
+ EA +F ++K PD +++SL+ Y S + +A ++ +P L
Sbjct: 397 DNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTL 456
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
++I YG +DD ++ ++ + GI P+
Sbjct: 457 FVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 192/443 (43%), Gaps = 15/443 (3%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
KP+ L+ +A + + A+ +++ M+ + I P S Y L+N GN A+
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+ +KM D+G + VT+N L+ +++L + E + + P+ T + ++
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K R D+A+ + + + K E P++VSY ++ + G+ ++ A F + A+G K +
Sbjct: 223 KERGTDEAVKLLDEIIVKGGE--PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF- 340
+VSYN L+ G +EA + E+ P +V+Y L+N+ + ++A V
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 341 EMIKRN-KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
EM K N + + SYN +I G +D +K L EM +PN T A
Sbjct: 341 EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE---GTYNAIGSL 397
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVA---YNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
C K++ Q K Y S I S G A L M + D
Sbjct: 398 CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPD 457
Query: 457 SVTYTILISGSCKMSKYG---EALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ TY+ LI G C + E LS MEE + K V +++++ K + A
Sbjct: 458 AHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDN--FNAMILGLCKIRRTDLAME 515
Query: 514 TFNLMKSSGCSPDVVTYTSMLDA 536
F +M P+ TY +++
Sbjct: 516 VFEMMVEKKRMPNETTYAILVEG 538
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 170/392 (43%), Gaps = 10/392 (2%)
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
N ++ + + + G P++ LL ++ KA+ ELM + I PD +
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 215 IVIHCLVKLRQYDKAIDIFNSMREKKSECHP-DVVSYTSIIHLYSVSGQIENCEAAFNMM 273
+++ L K A+ + M + +P + V+Y +++ + G + +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHG---YPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 274 LAEGIKPSIVSYNALV-GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
+ +G+ P+ +Y+ L+ AY G EA+ + +EI G P++VSY LL + + +
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGT-DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
A +F + K N+VSYN L+ +G ++A +L EM+ P+VV+
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 393 L---LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR 449
L LA GR Q ++ +S + ++ +YN I G+ D + M
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQ-FRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 450 KKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIV 509
++ K + TY + S SK EA ++ + + + + + Y S++ + ++G
Sbjct: 381 YRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTF 440
Query: 510 EAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
A M G PD TY++++ G
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 153/341 (44%), Gaps = 10/341 (2%)
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFE-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
PDL + + S + S+ E L+ G H +P+ +++ L K + KAI
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGH-KPNVAHSTQLLYDLCKANRLKKAIR 127
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+ M S PD +YT +++ G + M G + V+YNALV
Sbjct: 128 VIELM--VSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRG 185
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
G ++L + Q G P+ +Y+ LL A + + +A + + I +PN
Sbjct: 186 LCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPN 245
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
LVSYN L+ + G DDA+ + RE+ G + NVVS LL C C + + L
Sbjct: 246 LVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL-RCLCCDGRWEEANSLL 304
Query: 412 AAQMRGIKL-NTVAYNSAIGSYLNVGEYDKALGLYKSMRK--KKIKADSVTYTILISGSC 468
A G + + V YN I S G ++AL + K M K + + + +Y +I+ C
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSI--LCAYSKQGQ 507
K K + ++EM++ + ++ Y++I LC ++ + Q
Sbjct: 365 KEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQ 405
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 177/428 (41%), Gaps = 50/428 (11%)
Query: 82 RHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS 141
+ NR+ +A + M PDA Y L+N + G +AM +++ M P +
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFE-- 199
TYN L+ G+ ++L +++ G+ P+ T++ LL A +A+ +
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
++KG P+ + N+++ K + D A+ +F + K + +VVSY ++
Sbjct: 238 IVKGGE--PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA--NVVSYNILLRCLCC 293
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG--FRPDI 317
G+ E + M PS+V+YN L+ + A HG ++AL V E+ + FR
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTA 353
Query: 318 VSYTSLLNAYGRSQKPQ-KARGVFEMIKRNKLKPNLVSYNAL------------------ 358
SY ++ + K + + EMI R + KPN +YNA+
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYR-RCKPNEGTYNAIGSLCEHNSKVQEAFYIIQ 412
Query: 359 -----------------IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
I + G A ++L EM + G P+ + L+ G C
Sbjct: 413 SLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR--GLCL 470
Query: 402 Q---KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ G +E + + K +N+ I + D A+ +++ M +KK +
Sbjct: 471 EGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNET 530
Query: 459 TYTILISG 466
TY IL+ G
Sbjct: 531 TYAILVEG 538
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 138/312 (44%), Gaps = 11/312 (3%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN+++ + R D A LF E+ K + +YN L+ G+W A +++ +M
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT--DNGVGPDLVTHNILLSAFKSGSQ 190
PS TYN LIN+ G ++AL V K+M+ ++ ++N +++ +
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK 368
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+ + M +P+ T N + + +A I S+ K+ C D Y
Sbjct: 369 VDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF--Y 426
Query: 251 TSIIHLYSVSGQIENCEAAFNM---MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
S+I G N AAF + M G P +Y+AL+ GM A+ V +
Sbjct: 427 KSVITSLCRKG---NTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSI 483
Query: 308 IKQN-GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
++++ +P + ++ +++ + ++ A VFEM+ K PN +Y L++
Sbjct: 484 MEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHED 543
Query: 367 LLDDAIKILREM 378
L+ A ++L E+
Sbjct: 544 ELELAKEVLDEL 555
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 35/270 (12%)
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
++ G KP++ L+ K+A+ V + +G PD +YT L+N +
Sbjct: 97 LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
A + E ++ + N V+YNAL+ G L+ +++ + + Q G+ PN +
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
LL A A + RG D+A+ L + K
Sbjct: 217 LLEA---------------AYKERGT--------------------DEAVKLLDEIIVKG 241
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
+ + V+Y +L++G CK + +A++ E+ + Y+ +L G+ EA
Sbjct: 242 GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEAN 301
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
S M +P VVTY ++++ G+
Sbjct: 302 SLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%)
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET 408
KP+L S + D L D+ L + G +PNV LL + ++ K
Sbjct: 68 KPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIR 127
Query: 409 VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
V+ GI + AY + G A+ L + M +++VTY L+ G C
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
+ ++L F+E +M L + YS +L A K+ EA + + G P++V
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 529 TYTSMLDAYTAAGKMN 544
+Y +L + G+ +
Sbjct: 248 SYNVLLTGFCKEGRTD 263
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 123/244 (50%)
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
+S DVV T+I+ G N + F M +GI P++++YN ++ ++ G
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
+A + + + PDIV++++L+NA+ + +K +A +++ + R + P ++YN++I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
D + +DDA ++L M G P+VV+ TL+ + + + RGI
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
NTV Y + I + VG+ D A L M + D +T+ +++G C + +A +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 480 MEEM 483
+E++
Sbjct: 243 LEDL 246
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 2/252 (0%)
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
M + K D A+++ + G A N+ +M I P+ TYN +I++ SG
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
W +A + + M + + PD+VT + L++AF + S+A ++ M I P T T N
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
+I K + D A + +SM K C PDVV+++++I+ Y + +++N F M
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKG--CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
GI + V+Y L+ + G A + NE+ G PD +++ +L ++ +K
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 336 ARGVFEMIKRNK 347
A + E +++++
Sbjct: 239 AFAILEDLQKSE 250
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%)
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
Q+ + D+V T++++ + A+ +F + + PN+++YN +ID++ +G
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
DA ++LR M + I P++V+ L+ A + + + E + I T+ YNS I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
+ D A + SM K D VT++ LI+G CK + + EM +
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ Y++++ + + G + A+ N M S G +PD +T+ ML
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 112/234 (47%), Gaps = 3/234 (1%)
Query: 78 RLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP 137
RL N I+ A+ LF EM E P+ TYN +I++ +G+W A ++ M+ I
Sbjct: 19 RLCKDGNHIN-AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 77
Query: 138 PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSY 197
P T++ LINA EA + K+M + P +T+N ++ F + A
Sbjct: 78 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 137
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
+ M PD T + +I+ K ++ D ++IF M + + V+YT++IH +
Sbjct: 138 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV--ANTVTYTTLIHGF 195
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
G ++ + N M++ G+ P ++++ ++ + ++A + +++++
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 87/167 (52%)
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
M Q I+ +VV ++ + + + + +GI N + YN I S+ + G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
+ A L + M +K+I D VT++ LI+ K K EA +EM+ + + Y+S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
++ + KQ ++ +A+ + M S GCSPDVVT++++++ Y A +++
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN MI R A L M E + PD T++ALINA + + A I +ML
Sbjct: 48 YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R +I P+ TYN++I+ +A + M G PD+VT + L++ + +
Sbjct: 108 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
+ F M I +T T +IH ++ D A D+ N M
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN MI + +R+D A+ + M C PD T++ LIN + +A + M I +M
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R I + TY LI+ G+ A ++ +M GV PD +T + +L+ S +
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 237
Query: 193 KALSYFE 199
KA + E
Sbjct: 238 KAFAILE 244
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 2/172 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
++ +I + ++ +A ++ EM W P TYN++I+ + + A ++D M
Sbjct: 83 FSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMA 142
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
P T++ LIN + + + +M G+ + VT+ L+ F
Sbjct: 143 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 202
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECH 244
A M + PD T + ++ L ++ KA I + +KSE H
Sbjct: 203 AAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL--QKSEDH 252
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 155/328 (47%), Gaps = 6/328 (1%)
Query: 57 FQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
F W Q C R+ + Y++++++ A L EM + A T+N LI +
Sbjct: 136 FLWSGEQE--CFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICS 193
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD 174
G AG + A+ P + +YN ++N+ +K V K+M ++G PD
Sbjct: 194 CGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPD 253
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
++T+NILL + + F+ M PD+ T NI++H L K + A+ N
Sbjct: 254 VLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLN 313
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
M+E + P V+ YT++I S +G +E C+ + M+ G +P +V Y ++ Y
Sbjct: 314 HMKEVGID--PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVV 371
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
G +A +F E+ G P++ +Y S++ + + ++A + + ++ PN V
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDG 382
Y+ L+ G L +A K++REM + G
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 7/304 (2%)
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKM 166
+Y+ L+ G+++ ++D+M++ P + T+N LI +CG +G K+A+ K
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 167 TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY 226
P ++N +L++ QY ++ M PD T NI++ +L +
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 227 DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYN 286
D+ +F+ M + PD +Y ++H+ + N M GI PS++ Y
Sbjct: 271 DRFDRLFDEM--ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKR 345
L+ + G + +E+ + G RPD+V YT ++ Y S + KA+ +F EM +
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL---LAACGRCSQ 402
+L PN+ +YN++I G +A +L+EME G PN V TL L G+ S+
Sbjct: 389 GQL-PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSE 447
Query: 403 KGKI 406
K+
Sbjct: 448 ARKV 451
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 145/307 (47%), Gaps = 3/307 (0%)
Query: 240 KSECHPDVV-SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
+ EC V SY ++ +++ G+ + + M+ +G + ++N L+ + G+
Sbjct: 141 EQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLA 200
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
K+A++ F + K +RP SY ++LN+ ++ + V++ + + P++++YN L
Sbjct: 201 KQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNIL 260
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
+ G +D ++ EM +DG P+ + LL G+ ++ T L+ + GI
Sbjct: 261 LWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI 320
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
+ + Y + I G + M K + D V YT++I+G + +A
Sbjct: 321 DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKE 380
Query: 479 FMEEM-MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAY 537
EM + +LP + Y+S++ G+ EA M+S GC+P+ V Y++++
Sbjct: 381 MFREMTVKGQLP-NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 538 TAAGKMN 544
AGK++
Sbjct: 440 RKAGKLS 446
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%)
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
+P SYNA++ + K V+ ++ ++GF PD+++Y LL R K +
Sbjct: 216 RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+F+ + R+ P+ +YN L+ G A+ L M++ GI P+V+ TL+
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
R + L G + + V Y I Y+ GE DKA +++ M K +
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
TY +I G C ++ EA ++EM + VYS+++ K G++ EA M
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Query: 519 KSSG 522
G
Sbjct: 456 VKKG 459
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 2/180 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN+++ + + N+ A M+E P Y LI+ RAG +D+M+
Sbjct: 292 YNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMV 351
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+A P Y +I SG +A + ++MT G P++ T+N ++ ++
Sbjct: 352 KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 411
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECH--PDVVSY 250
+A + M+ P+ + ++ L K + +A + M +K H P ++ Y
Sbjct: 412 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 225/483 (46%), Gaps = 30/483 (6%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
+I L++R+ + AR LF EM D ++NA+I+ + ++G + A+ + + LRA
Sbjct: 191 LIHLYSRYKAVGNARILFDEMP----VRDMGSWNAMISGYCQSGNAKEALT-LSNGLRAM 245
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
T +L++AC +G++ + + +G+ +L N L+ + +
Sbjct: 246 ---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
F+ M ++R D + N +I Q +AI +F MR S PD ++ S+
Sbjct: 303 KVFDRM---YVR-DLISWNSIIKAYELNEQPLRAISLFQEMR--LSRIQPDCLTLISLAS 356
Query: 256 LYSVSGQIENCEAAFNMMLAEG-IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR 314
+ S G I C + L +G I NA+V YA G+ A VFN +
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT--- 413
Query: 315 PDIVSYTSLLNAYGRSQKPQKARGVFEMIKR-NKLKPNLVSYNALIDAYGSNGLLDDAIK 373
D++S+ ++++ Y ++ +A ++ +++ ++ N ++ +++ A G L +K
Sbjct: 414 -DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
+ + ++G+ +V + +L G+C G++E LS + ++N+V +N+ I +
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKC---GRLEDALSLF-YQIPRVNSVPWNTLIACHG 528
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
G +KA+ L+K M + +K D +T+ L+S +C S + + EMM ++
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS-ACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 494 V--YSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
+ Y ++ Y + GQ+ E+ +KS PD + ++L A G ++ + E
Sbjct: 588 LKHYGCMVDMYGRAGQL---ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644
Query: 552 DGF 554
F
Sbjct: 645 HLF 647
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 165/375 (44%), Gaps = 49/375 (13%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI + G + C VF R Y +N +I+ + + + +A LF EM+
Sbjct: 288 LIDLYAEFGRLRDCQKVFD-----RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN----------LINA 149
R +PD T +L + + G R ++ LR T N L+++
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 150 CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK--GTHIR 207
+ NW D+++ N ++S + S+A+ + +M+ G
Sbjct: 403 ARAVFNWLP-------------NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 208 PDTTTLNIVIHC--LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
T ++++ C LRQ K R K+ + DV TS+ +Y G++E+
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKL-----HGRLLKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 266 CEAAFNMMLAEGIKPSI--VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
+ F + P + V +N L+ + HG G++A+++F E+ G +PD +++ +L
Sbjct: 505 ALSLFYQI------PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 558
Query: 324 LNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
L+A S + + FEM++ + + P+L Y ++D YG G L+ A+K ++ M
Sbjct: 559 LSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS--- 615
Query: 383 IQPNVVSICTLLAAC 397
+QP+ LL+AC
Sbjct: 616 LQPDASIWGALLSAC 630
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 160/419 (38%), Gaps = 81/419 (19%)
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFEL-MKGTHIRPDTTTLNIV------------IHCL 220
D+ N+++S + S+ + F L M + + PD T V IHCL
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
L+ F M DV S+IHLYS + N F+ M +
Sbjct: 176 A-LK--------FGFMW--------DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG- 217
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP-DIVSYTSLLNAYGRSQKPQKARGV 339
S+NA++ Y G KEAL + NG R D V+ SLL+A + + +
Sbjct: 218 ---SWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTI 269
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDD----------------------------- 370
++ L+ L N LID Y G L D
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 371 --AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY-NS 427
AI + +EM IQP+ +++ +L + + +V +G L + N+
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEAL---SFMEEMM 484
+ Y +G D A ++ + D +++ +ISG + EA+ + MEE
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLP----NTDVISWNTIISGYAQNGFASEAIEMYNIMEE-- 443
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
++ ++ + S+L A S+ G + + + +G DV TS+ D Y G++
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 166/367 (45%), Gaps = 38/367 (10%)
Query: 212 TLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN 271
T+ + L+ +Q+ +A+++F+ +RE+ + P +Y ++ L SGQ + F+
Sbjct: 90 TVTETLSDLIAKKQWLQALEVFDMLREQ-TFYQPKEGTYMKLLVLLGKSGQPNRAQKLFD 148
Query: 272 MMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ-NGFRPDIVSYTSLLNAYGRS 330
ML EG++P++ Y AL+ AY + +A + +++K +PD+ +Y++LL A +
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDA 208
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM------------ 378
+ +++ + + PN V+ N ++ YG G D K+L +M
Sbjct: 209 SQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWT 268
Query: 379 ------------------------EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
GI+P + L+ + G+ K+ +V+ +
Sbjct: 269 MNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMR 328
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
T YN+ I ++ +VG+ + MR + +KAD+ T+ LI+G +
Sbjct: 329 KLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFH 388
Query: 475 EALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ +S ++ ++P + Y++++ A +K ++E E + MK C D T+ M+
Sbjct: 389 KVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMV 448
Query: 535 DAYTAAG 541
+AY G
Sbjct: 449 EAYEKEG 455
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 156/350 (44%), Gaps = 2/350 (0%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
+P TY L+ G++GQ A + D+ML + P+ Y L+ A S +A +
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 162 VCKKMTD-NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
+ KM PD+ T++ LL A SQ+ S ++ M I P+T T NIV+
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
++ ++D+ + + M + C PDV + I+ ++ G+I+ E+ + GI+P
Sbjct: 241 GRVGRFDQMEKVLSDML-VSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
++N L+G+Y M + V +++ F +Y +++ A+ + F
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTF 359
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRC 400
+ ++ +K + ++ LI+ Y + GL I ++ + I N +++AC +
Sbjct: 360 DQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKA 419
Query: 401 SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
++E V + R ++ + + +Y G DK L + +K
Sbjct: 420 DDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQK 469
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 151/329 (45%), Gaps = 19/329 (5%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
VF ++ Q Y + Y ++ L + + ++A+ LF EM E +P E Y AL+ A+
Sbjct: 110 VFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAY 169
Query: 116 GRAGQWRWAMNIMDDMLRAAIP---PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG 172
R+ A +I+D M + P P TY+ L+ AC + + ++ K+M + +
Sbjct: 170 TRSNLIDDAFSILDKM--KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLIT 227
Query: 173 PDLVTHNILLSAF-KSG--SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
P+ VT NI+LS + + G Q K LS +++ T +PD T+NI++ + +
Sbjct: 228 PNTVTQNIVLSGYGRVGRFDQMEKVLS--DMLVSTACKPDVWTMNIILSVFGNMGK---- 281
Query: 230 IDIFNSMREKKSE--CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
ID+ S EK P+ ++ +I Y + + M + +YN
Sbjct: 282 IDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNN 341
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
++ A+A G K L F++++ G + D ++ L+N Y + K ++ + +
Sbjct: 342 IIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFE 401
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILR 376
+ N YNA+I A DD I++ R
Sbjct: 402 IPENTAFYNAVISACAK---ADDLIEMER 427
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 69 RNDIYNMMIRLHARHN--RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMN 126
+ D++ M I L N +ID + + + + +P+ T+N LI ++G+ + +
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 322
Query: 127 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFK 186
+M+ M + P + STYNN+I A G+ K +M G+ D T L++ +
Sbjct: 323 VMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYA 382
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+ + K +S +L I +T N VI K + ++ M+E++ C D
Sbjct: 383 NAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVC--D 440
Query: 247 VVSYTSIIHLYSVSG 261
++ ++ Y G
Sbjct: 441 SRTFEIMVEAYEKEG 455
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 97/219 (44%), Gaps = 36/219 (16%)
Query: 335 KARGVFEMIKRNKL-KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
+A VF+M++ +P +Y L+ G +G + A K+ EM ++G++P V L
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 394 LAACGRCSQKGKIETVLSAAQ-MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
LAA R + ++L + + + Y++ + + ++ ++D LYK M ++
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
I ++VT I++SG ++ ++ + ME+++
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQ----MEKVLS--------------------------- 254
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
+++ S+ C PDV T +L + GK++ YE
Sbjct: 255 ---DMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYE 290
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 177/411 (43%), Gaps = 33/411 (8%)
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 134
M++RL N+ A L M+ C + ++ +GR + ++ + M
Sbjct: 57 MVLRL-VSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 135 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQYSK 193
PS+ Y ++ A K M + G+ P + + N+L+ A ++
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
L F M PD+ T +I L + + D+A +F M EK +C P VV+YTS+
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK--DCAPTVVTYTSL 233
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I+ S ++ M ++GI+P++ +Y++L+ G +A+ +F + G
Sbjct: 234 INGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIK 373
RP++V+YT+L+ + QK Q+A + + + LKP+ Y +I + + +A
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
L EM GI PN ++ I S +RG+ N Y S
Sbjct: 354 FLDEMILGGITPNRLT--------------WNIHVKTSNEVVRGLCAN---YPS------ 390
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
+A LY SMR + I + T L+ CK ++ +A+ ++E++
Sbjct: 391 ------RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 154/335 (45%), Gaps = 21/335 (6%)
Query: 224 RQYDKAIDIFNSMR----EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
R Y + F+S+R K +C P +Y +++ + Q+ + M G+
Sbjct: 94 RGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLP 153
Query: 280 PSIVSYNALVGAYAAH-GMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
P++ S N L+ A + G L +F E+ + G PD +Y +L++ R + +A+
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+F + P +V+Y +LI+ + +D+A++ L EM+ GI+PNV + +L+
Sbjct: 214 LFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC 273
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ + + + RG + N V Y + I + +A+ L M + +K D+
Sbjct: 274 KDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 459 TYTILISGSCKMSKYGEALSFMEEMM-----------HLKLPVSKEVYSSILCAYSKQGQ 507
Y +ISG C +SK+ EA +F++EM+ ++ + S EV + Y +
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR-- 391
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
A + + M+S G S +V T S++ G+
Sbjct: 392 ---AFTLYLSMRSRGISVEVETLESLVKCLCKKGE 423
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 142/315 (45%), Gaps = 11/315 (3%)
Query: 54 NLVFQWMKNQRNYCARNDI--YNMMIRLHARHN-RIDQARGLFFEMQEWRCKPDAETYNA 110
NL F++ KN R + N++I+ R++ +D +F EM + C PD+ TY
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 111 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 170
LI+ R G+ A + +M+ P+ TY +LIN S N EA+ ++M G
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 171 VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
+ P++ T++ L+ + +A+ FE+M RP+ T +I L K ++ +A+
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
++ + M + + PD Y +I + + + M+ GI P+ +++N V
Sbjct: 318 ELLDRMNLQGLK--PDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 291 AY--AAHGM----GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
G+ A ++ ++ G ++ + SL+ + + QKA + + I
Sbjct: 376 TSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Query: 345 RNKLKPNLVSYNALI 359
+ P+ ++ LI
Sbjct: 436 TDGCIPSKGTWKLLI 450
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 199/489 (40%), Gaps = 22/489 (4%)
Query: 60 MKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG 119
M +R+ Y ++I + +RID+A LF +M+ D Y+ LI +
Sbjct: 273 MLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHK 332
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
A+++ ++ R+ IPP R L+ + V + D ++ +
Sbjct: 333 DLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI--IGDIDKKSVMLLYK 390
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTH------------------IRPDTTTLNIVIHCLV 221
L F +A S+ + + G + I PD+ +L+IVI+CLV
Sbjct: 391 SLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLV 450
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K + D A+ + + + + + P + Y +II G+ E M G++PS
Sbjct: 451 KANKVDMAVTLLHDIVQ--NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+ N + G A AL + +++ GF P I T L+ + + A +
Sbjct: 509 QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLD 568
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ ++V+ A ID N +D +++ R++ +G P+V++ L+ A +
Sbjct: 569 DVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKAC 628
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+ + + + + +G+K YNS I + GE D+ L M + + D +TYT
Sbjct: 629 RTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYT 688
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
LI G C + EA+ EM ++ + +++ K G EA F M+
Sbjct: 689 SLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK 748
Query: 522 GCSPDVVTY 530
PD Y
Sbjct: 749 EMEPDSAVY 757
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 156/350 (44%), Gaps = 4/350 (1%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
PD+++ + +IN +A + A+ ++ D+++ + P YNN+I G +E+L +
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
+M D GV P T N + + AL + M+ P ++ K
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK---K 553
Query: 223 LRQYDKAIDIFNSMREKKSECH-PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
L + +A+D + + E +V+ T+ I + ++ F + A G P
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+++Y+ L+ A EA ++FNE+ G +P + +Y S+++ + + + +
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ ++ P++++Y +LI ++G +AI EM+ PN ++ L+ +C
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
G+ + + ++ ++ Y S + S+L+ + G+++ M K
Sbjct: 734 WSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHK 783
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 205/504 (40%), Gaps = 32/504 (6%)
Query: 55 LVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALI 112
L F W Q Y RND+ YN M + +R + + L ++ RC + I
Sbjct: 91 LFFNWASKQEGY--RNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFI 148
Query: 113 NAHGRAGQWRWAMNIMDDMLRAAI-PPSRSTYNNLINACGSSGNWKEAL--NVCKKMTDN 169
G AG A ++ D + + P+ TYN L+ A S + L K+M D
Sbjct: 149 RCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDC 208
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
G D T +L + + + +ALS F E++ + +T+ +V C K Q DK
Sbjct: 209 GFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFC--KWGQVDK 266
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
A ++ + E+ + + +Y +IH + +I+ F M G+ I Y+ L
Sbjct: 267 AFELIEMLEER--DIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVL 324
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+G H + AL ++ EIK++G PD LL ++ S++ + +R +I
Sbjct: 325 IGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSF--SEESELSRITEVIIGDIDK 382
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET 408
K ++ Y +L + + N L+ +A ++ + + V I LL K +
Sbjct: 383 KSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL--------KDHNKA 434
Query: 409 VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
+L + I +N + + + D A+ L + + + + Y +I G C
Sbjct: 435 ILPDSDSLSIVINCL---------VKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMC 485
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
K + E+L + EM + S+ + I +++ V A M+ G P +
Sbjct: 486 KEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIK 545
Query: 529 TYTSMLDAYTAAGKMNFEPLKYED 552
T ++ G+ + KY D
Sbjct: 546 HTTFLVKKLCENGRA-VDACKYLD 568
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 45/338 (13%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN +I + R +++ L EM++ +P T N + + A++++ M
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD----------------------- 168
P L+ +G A++ CK + D
Sbjct: 536 RFYGFEPWIKHTTFLVKKLCENG---RAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKN 592
Query: 169 ---------------NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
NG PD++ +++L+ A + +A F M ++P T
Sbjct: 593 EGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATY 652
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N +I K + D+ + M E E +PDV++YTS+IH SG+ +N M
Sbjct: 653 NSMIDGWCKEGEIDRGLSCIVRMYE--DEKNPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+ P+ +++ AL+ G EAL+ F E+++ PD Y SL++++ S+
Sbjct: 711 KGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENI 770
Query: 334 QKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
G+F EM+ + + P V N ++ ++ ++D
Sbjct: 771 NAGFGIFREMVHKGRF-PVSVDRNYMLAVNVTSKFVED 807
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%)
Query: 66 YCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
+C Y+++I+ + R +A LF EM KP TYN++I+ + G+ +
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGL 669
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
+ + M P TY +LI+ +SG EA+ +M P+ +T L+
Sbjct: 670 SCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGL 729
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
+AL YF M+ + PD+ ++ + + IF M K
Sbjct: 730 CKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHK 783
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 133/622 (21%), Positives = 244/622 (39%), Gaps = 105/622 (16%)
Query: 19 DDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIR 78
DD+ +++ +V + + ++ ++KE QRG F WMK Q +Y +Y +++R
Sbjct: 140 DDMRFVMSSFVAKLSFRDMCVVLKE--QRG-WRQVRDFFSWMKLQLSYRPSVVVYTIVLR 196
Query: 79 LHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMN------------ 126
L+ + +I A F EM E C+PDA ++ + R G+ +
Sbjct: 197 LYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILL 256
Query: 127 --------------------IMD---DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 163
++D +M+ +PP+ TY ++++ G +EAL
Sbjct: 257 STSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAF 316
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
+M G P+ VT++ ++S + KA+ +E M+ I P T ++ K
Sbjct: 317 GEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKT 376
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF------------- 270
Y KA+ +F M ++++ D V II +Y G + ++ F
Sbjct: 377 ENYPKALSLFADM--ERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEK 434
Query: 271 ----------------------NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
MM I S +Y ++ YA A F +
Sbjct: 435 TYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRAL 494
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
+ G PD S +LN Y R +KA+G + I +++ ++ Y + Y G++
Sbjct: 495 SKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMV 553
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR----GIKLN--- 421
+A ++ +M ++ + + TL + ++ K E VL+ +Q+ G+ LN
Sbjct: 554 AEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRL 613
Query: 422 ---------------------TVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
+ A N I S++ G+ KA + + + ++ + T
Sbjct: 614 KEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETI 673
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
LI+ + K EA K P K V S++ AY + G + +A F
Sbjct: 674 ATLIAVYGRQHKLKEAKRLYLAAGESKTP-GKSVIRSMIDAYVRCGWLEDAYGLFMESAE 732
Query: 521 SGCSPDVVTYTSMLDAYTAAGK 542
GC P VT + +++A T GK
Sbjct: 733 KGCDPGAVTISILVNALTNRGK 754
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 161/388 (41%), Gaps = 72/388 (18%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
MI + R ++ A GLF E E C P A T + L+NA G+ R A +I L
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
I YN LI A +G + A + ++M +GV + T+N ++S + G Q
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQ----- 824
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
DKAI+IF++ R +S + D YT++I
Sbjct: 825 ------------------------------LDKAIEIFSNAR--RSGLYLDEKIYTNMIM 852
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
Y G++ + F+ M +GIKP SYN +V A + E + +++NG
Sbjct: 853 HYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCT 912
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
D+ +Y +L+ Y S + +A ++K + + +++L+ A G++++A +
Sbjct: 913 DLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTY 972
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
+M + GI P+ +AC R KG Y+
Sbjct: 973 CKMSEAGISPD--------SACKRTILKG---------------------------YMTC 997
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTIL 463
G+ +K + Y+ M + ++ D +++
Sbjct: 998 GDAEKGILFYEKMIRSSVEDDRFVSSVV 1025
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 114/508 (22%), Positives = 204/508 (40%), Gaps = 35/508 (6%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N M+ L+ R N ++A+G ++ + D E Y + + + G A +++ M R
Sbjct: 506 NDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGR 565
Query: 134 AA----------IPPSRSTYNN--------------------LINACGSSGNWKEALNVC 163
A + S N ++N GN E +
Sbjct: 566 EARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAIL 625
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
M +G V N ++S+F SKA +++ +R + T+ +I +
Sbjct: 626 NLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQ 683
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIV 283
+ +A ++ + E K+ P S+I Y G +E+ F +G P V
Sbjct: 684 HKLKEAKRLYLAAGESKT---PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAV 740
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMI 343
+ + LV A G +EA + + D V Y +L+ A + K Q A ++E +
Sbjct: 741 TISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERM 800
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
+ + ++ +YN +I YG LD AI+I + G+ + ++ G+ +
Sbjct: 801 HTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKM 860
Query: 404 GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
+ ++ S Q +GIK T +YN + + + L ++M + D TY L
Sbjct: 861 SEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTL 920
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGC 523
I + S++ EA + + +P+S +SS+L A K G + EAE T+ M +G
Sbjct: 921 IQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGI 980
Query: 524 SPDVVTYTSMLDAYTAAGKMNFEPLKYE 551
SPD ++L Y G L YE
Sbjct: 981 SPDSACKRTILKGYMTCGDAEKGILFYE 1008
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 205/511 (40%), Gaps = 68/511 (13%)
Query: 63 QRNYCARND-IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQW 121
+RN ++ I ++IR++ + A+ +F E + D +TY A+ H +G
Sbjct: 390 ERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNV 449
Query: 122 RWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
A+++++ M IP SR Y ++ N A + ++ G+ PD + N +
Sbjct: 450 VKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDM 508
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM-RE-- 238
L+ + + KA + + + + D + K +A D+ M RE
Sbjct: 509 LNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREAR 568
Query: 239 -----------------KKSECHP--------DVVSYTSIIHLYSVSGQIENCEAAFNMM 273
K + H DV++ +++L G + +A N+M
Sbjct: 569 VKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLM 628
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+ S V N ++ ++ G +A ++ + I + G R + + +L+ YGR K
Sbjct: 629 FKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKL 686
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
++A+ ++ +K P ++IDAY G L+DA + E + G P V+I L
Sbjct: 687 KEAKRLYLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISIL 745
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ A N G++ +A + ++ +K I
Sbjct: 746 VNAL-----------------------------------TNRGKHREAEHISRTCLEKNI 770
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ D+V Y LI + K A E M +P S + Y++++ Y + Q+ +A
Sbjct: 771 ELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIE 830
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
F+ + SG D YT+M+ Y GKM+
Sbjct: 831 IFSNARRSGLYLDEKIYTNMIMHYGKGGKMS 861
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 188/433 (43%), Gaps = 5/433 (1%)
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 134
+M+ L + +++ + + M ++ + N +I++ R G A I D ++R
Sbjct: 607 LMLNLRLKEGNLNETKAILNLM--FKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRL 664
Query: 135 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKA 194
+ T LI G KEA + ++ V +++ + + G A
Sbjct: 665 GLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCG-WLEDA 723
Query: 195 LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII 254
F P T++I+++ L ++ +A I + EK E D V Y ++I
Sbjct: 724 YGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIEL--DTVGYNTLI 781
Query: 255 HLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR 314
+G+++ + M G+ SI +YN ++ Y +A+ +F+ +++G
Sbjct: 782 KAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLY 841
Query: 315 PDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKI 374
D YT+++ YG+ K +A +F +++ +KP SYN ++ ++ L + ++
Sbjct: 842 LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDEL 901
Query: 375 LREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLN 434
L+ ME++G ++ + TL+ SQ + E ++ + +GI L+ ++S + + +
Sbjct: 902 LQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVK 961
Query: 435 VGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV 494
G ++A Y M + I DS ++ G + + F E+M+ + + V
Sbjct: 962 AGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFV 1021
Query: 495 YSSILCAYSKQGQ 507
S + Y G+
Sbjct: 1022 SSVVEDLYKAVGK 1034
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 384 QPNVVSICTLLAACGRCSQKGKI----ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+P+VV +L G Q GKI ET L ++ G + + VA + + +Y G +
Sbjct: 185 RPSVVVYTIVLRLYG---QVGKIKMAEETFLEMLEV-GCEPDAVACGTMLCTYARWGRHS 240
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
L YK++++++I + Y ++S K S +G+ + EM+ +P ++ Y+ ++
Sbjct: 241 AMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVV 300
Query: 500 CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
+Y+KQG EA F MKS G P+ VTY+S++ AG YED
Sbjct: 301 SSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 167/336 (49%), Gaps = 8/336 (2%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F W Q N+ + Y++++++ A L EM + A T+N LI G
Sbjct: 139 FVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCG 198
Query: 117 RAGQWRWAMNIMDDMLRAAI---PPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP 173
AG R ++++ +++ P + +YN ++++ +K V ++M ++G P
Sbjct: 199 EAGLAR---DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTP 255
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
D++T+NI++ A + + + M PD T NI++H L + A+++
Sbjct: 256 DVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLL 315
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
N MRE E P V+ +T++I S +G++E C+ + + G P +V Y ++ Y
Sbjct: 316 NHMREVGVE--PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYI 373
Query: 294 AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLV 353
+ G ++A +F E+ + G P++ +Y S++ + + K ++A + + ++ PN V
Sbjct: 374 SGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFV 433
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
Y+ L++ + G + +A +++++M + G +++S
Sbjct: 434 VYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 155/348 (44%), Gaps = 39/348 (11%)
Query: 105 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCK 164
A Y+ L+ G+++ ++D+M++ P + T+N LI CG +G
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAG---------- 201
Query: 165 KMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
+ D+V I SK +Y RP + N ++H L+ ++
Sbjct: 202 ------LARDVVEQFI----------KSKTFNY---------RPYKHSYNAILHSLLGVK 236
Query: 225 QYDKAID-IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIV 283
QY K ID ++ M E PDV++Y ++ G+ + + M+ +G P +
Sbjct: 237 QY-KLIDWVYEQMLEDGFT--PDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLY 293
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMI 343
+YN L+ A AL + N +++ G P ++ +T+L++ R+ K + + +
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDET 353
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
+ P++V Y +I Y S G L+ A ++ +EM + G PNV + +++ +
Sbjct: 354 VKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKF 413
Query: 404 GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
+ +L + RG N V Y++ + + N G+ +A + K M +K
Sbjct: 414 KEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
+P SYNA++ + K V+ ++ ++GF PD+++Y ++ A R K +
Sbjct: 219 RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYR 278
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+ + + ++ P+L +YN L+ + A+ +L M + G++P V+ TL+
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
R + + + G + V Y I Y++ GE +KA ++K M +K +
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
TY +I G C K+ EA + ++E M
Sbjct: 399 TYNSMIRGFCMAGKFKEACALLKE-----------------------------------M 423
Query: 519 KSSGCSPDVVTYTSMLDAYTAAGKM 543
+S GC+P+ V Y+++++ AGK+
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKV 448
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 126/294 (42%), Gaps = 35/294 (11%)
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
Y ++ +++ G+ + + M+ +G + ++N L+ G+ ++ + F + K
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
+RP SY ++L++ ++ + V+E + + P++++YN ++ A G D
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
++L EM +DG P++ + N + ++ A
Sbjct: 275 RLYRLLDEMVKDGFSPDLYT------------------------------YNILLHHLAT 304
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
G+ + AL L MR+ ++ + +T LI G + K FM+E + +
Sbjct: 305 GN-----KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCT 359
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
Y+ ++ Y G++ +AE F M G P+V TY SM+ + AGK
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKF 413
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 2/235 (0%)
Query: 310 QNGFRPDIVSYTSLLNAYGR-SQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
Q FR Y L+ + + R + EMIK + ++N LI G GL
Sbjct: 145 QENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLICTCGEAGLA 203
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
D ++ + + +P S +L + Q I+ V G + + YN
Sbjct: 204 RDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIV 263
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
+ + +G+ D+ L M K D TY IL+ +K AL+ + M + +
Sbjct: 264 MFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 323
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+++++ S+ G++ + + GC+PDVV YT M+ Y + G++
Sbjct: 324 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL 378
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 194/384 (50%), Gaps = 34/384 (8%)
Query: 73 YNMMIRLHAR-HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+N MI +A+ + +D A LF +M E D ++N++I+ + + G+ A + D M
Sbjct: 223 WNSMISGYAQTSDGVDIASKLFADMPE----KDLISWNSMIDGYVKHGRIEDAKGLFDVM 278
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
R + T+ +I+ G A K + D D+V +N +++ + +
Sbjct: 279 PRRDV----VTWATMIDGYAKLGFVHHA----KTLFDQMPHRDVVAYNSMMAGYVQNKYH 330
Query: 192 SKALSYF-ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+AL F ++ K +H+ PD TTL IV+ + +L + KAID+ + EK+ +
Sbjct: 331 MEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKL--G 388
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIK-PSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
++I +YS G I++ M++ EGI+ SI +NA++G A HG+G+ A + +I+
Sbjct: 389 VALIDMYSKCGSIQHA-----MLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIE 443
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR-NKLKPNLVSYNALIDAYGSNGLL 368
+ +PD +++ +LNA S ++ FE+++R +K++P L Y ++D +G +
Sbjct: 444 RLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI 503
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+ A ++ EM ++PN V T L A CS + ET A+ ++ YN +
Sbjct: 504 ELAKNLIEEMP---VEPNDVIWRTFLTA---CSHHKEFETGELVAKHLILQ---AGYNPS 554
Query: 429 IGSYLNVGEYDKALGLYKSMRKKK 452
SY+ + + G++K +R+ +
Sbjct: 555 --SYVLLSNMYASFGMWKDVRRVR 576
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 41/290 (14%)
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
+NA++ +++ ++ALL+ + +NG D S + +L A R + + +K
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 345 RNKLKPNLVSYNALI----------------------DAYGSNGLLDDAIK---ILREME 379
+ L +L N LI D+ N ++D +K I+ E
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 380 QDGIQP----NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
+ P N++S ++++ + S I + L A + +++NS I Y+
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK---DLISWNSMIDGYVKH 265
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
G + A GL+ M ++ D VT+ +I G K+ A + ++M H + Y
Sbjct: 266 GRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV----AY 317
Query: 496 SSILCAYSKQGQIVEAESTFNLM-KSSGCSPDVVTYTSMLDAYTAAGKMN 544
+S++ Y + +EA F+ M K S PD T +L A G+++
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS 367
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 201/462 (43%), Gaps = 32/462 (6%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 145
+ A LF ++ E PD +N +I + + + +ML+ + P T+
Sbjct: 84 VSYAYKLFVKIPE----PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPF 139
Query: 146 LINACGSSGNWKEALNVCKKM----TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
L+N G AL KK+ G+G +L N L+ + A F+
Sbjct: 140 LLNGLKRDGG---ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD-- 194
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
+ D + N++I ++++Y+++I++ M +++ P V+ ++ S
Sbjct: 195 --RRCKEDVFSWNLMISGYNRMKEYEESIELLVEM--ERNLVSPTSVTLLLVLSACSKVK 250
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+ C+ + +PS+ NALV AYAA G A+ +F +K D++S+T
Sbjct: 251 DKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWT 306
Query: 322 SLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
S++ Y + AR F +M R++ +S+ +ID Y G +++++I REM+
Sbjct: 307 SIVKGYVERGNLKLARTYFDQMPVRDR-----ISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
G+ P+ ++ ++L AC E + + IK + V N+ I Y G +K
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A ++ M ++ D T+T ++ G + EA+ +M + + Y +L
Sbjct: 422 AQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Query: 501 AYSKQGQIVEAESTFNLMKSSG-CSPDVVTYTSMLDAYTAAG 541
A + G + +A F M+S P +V Y M+D AG
Sbjct: 478 ACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAG 519
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 180/422 (42%), Gaps = 72/422 (17%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
FPFL+ L + G C + + + N ++++++ +D ARG+F
Sbjct: 136 TFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVF-- 193
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
+ RCK D ++N +I+ + R ++ ++ ++ +M R + P+ T +++AC +
Sbjct: 194 --DRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKD 251
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRP------- 208
V + +++ P L N L++A+ + + A+ F MK +
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 311
Query: 209 --------------------DTTTLNIVIHCLVKLRQYDKAIDIFNSMRE---------- 238
D + I+I ++ ++++++IF M+
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 239 -----------------------KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
K++ DVV ++I +Y G E + F+ M
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM-- 429
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+ ++ A+V A +G G+EA+ VF +++ +PD ++Y +L+A S +
Sbjct: 430 --DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Query: 336 ARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
AR F +M ++++P+LV Y ++D G GL+ +A +ILR+M + PN + LL
Sbjct: 488 ARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP---MNPNSIVWGALL 544
Query: 395 AA 396
A
Sbjct: 545 GA 546
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 139/306 (45%), Gaps = 23/306 (7%)
Query: 244 HPDVVSYTSIIHLYS-VSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG----MG 298
PDVV + ++I +S V E NM L EG+ P ++ L+ G G
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLNM-LKEGVTPDSHTFPFLLNGLKRDGGALACG 154
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
K+ + + + G ++ +L+ Y ARGVF+ + K ++ S+N +
Sbjct: 155 KK---LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD----RRCKEDVFSWNLM 207
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
I Y +++I++L EME++ + P V++ +L+AC + K + V
Sbjct: 208 ISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT 267
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
+ + N+ + +Y GE D A+ +++SM+ + D +++T ++ G + A +
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLART 323
Query: 479 FMEEMMHLKLPVSKEVYSSILC-AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAY 537
+ ++M PV + +I+ Y + G E+ F M+S+G PD T S+L A
Sbjct: 324 YFDQM-----PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 538 TAAGKM 543
G +
Sbjct: 379 AHLGSL 384
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 168/371 (45%), Gaps = 38/371 (10%)
Query: 57 FQWMKNQRNYCARNDIYNMMI----------------------------------RLHAR 82
FQW + QR+Y Y+MMI R +AR
Sbjct: 121 FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYAR 180
Query: 83 HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 142
++D+A F M+++ P+ +N L++A ++ R A + ++M R P T
Sbjct: 181 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKT 239
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
Y+ L+ G N +A V ++M D G PD+VT++I++ + +AL M
Sbjct: 240 YSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMD 299
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
+ +P T ++++H + ++A+D F M ++S DV + S+I + + +
Sbjct: 300 PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM--ERSGMKADVAVFNSLIGAFCKANR 357
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
++N M ++G+ P+ S N ++ G EA VF ++ + PD +YT
Sbjct: 358 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTM 416
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
++ + ++ + A V++ +++ + P++ +++ LI+ A +L EM + G
Sbjct: 417 VIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMG 476
Query: 383 IQPNVVSICTL 393
I+P+ V+ L
Sbjct: 477 IRPSGVTFGRL 487
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 144/287 (50%), Gaps = 5/287 (1%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F L+ L + ++ VF+ M+++ + + Y++++ + + +AR +F EM
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENMRDR--FTPDSKTYSILLEGWGKEPNLPKAREVFREM 263
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+ C PD TY+ +++ +AG+ A+ I+ M + P+ Y+ L++ G+
Sbjct: 264 IDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRL 323
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+EA++ +M +G+ D+ N L+ AF ++ + MK + P++ + NI+
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+ L++ + D+A D+F M + C PD +YT +I ++ ++E + + M +
Sbjct: 384 LRHLIERGEKDEAFDVFRKMIKV---CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKK 440
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
G+ PS+ +++ L+ ++A ++ E+ + G RP V++ L
Sbjct: 441 GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 161/363 (44%), Gaps = 38/363 (10%)
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
K H +++I K+RQY D+ N+MR+KK +V ++ ++ Y+ +
Sbjct: 126 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK---MLNVETFCIVMRKYARAQ 182
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA--------------------------- 294
+++ AFN+M + P++V++N L+ A
Sbjct: 183 KVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSI 242
Query: 295 --HGMGKEALL-----VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
G GKE L VF E+ G PDIV+Y+ +++ ++ + +A G+ + +
Sbjct: 243 LLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 302
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE 407
KP Y+ L+ YG+ L++A+ EME+ G++ +V +L+ A + ++ +
Sbjct: 303 CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVY 362
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
VL + +G+ N+ + N + + GE D+A +++ M K + D+ TYT++I
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMF 421
Query: 468 CKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDV 527
C+ + A + M + S +S ++ ++ +A M G P
Sbjct: 422 CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSG 481
Query: 528 VTY 530
VT+
Sbjct: 482 VTF 484
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 107/235 (45%), Gaps = 2/235 (0%)
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
KQ + + +Y ++ + + ++ + + +++ K+ N+ ++ ++ Y +
Sbjct: 126 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKV 184
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
D+AI ME+ + PN+V+ LL+A + K + V + R ++ Y+
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSIL 243
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
+ + KA +++ M D VTY+I++ CK + EAL + M
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ +YS ++ Y + ++ EA TF M+ SG DV + S++ A+ A +M
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
LN + + Y + D+A+ + M K + + V + L+S CK +A
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 225
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
E M P SK YS +L + K+ + +A F M +GC PD+VTY+ M+D
Sbjct: 226 FENMRDRFTPDSK-TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCK 284
Query: 540 AGKMN 544
AG+++
Sbjct: 285 AGRVD 289
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 220/467 (47%), Gaps = 41/467 (8%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML-RAAIPPSRSTYN 144
++ AR +F E+ KP++ +N LI A+ ++ DM+ + P++ T+
Sbjct: 80 LEYARKVFDEIP----KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
LI A + ++ + VG D+ N L+ + S A F +K
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK-- 193
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
D + N +I+ V+ DKA+++F KK E S+ +++ + S +I
Sbjct: 194 --EKDVVSWNSMINGFVQKGSPDKALELF-----KKMESEDVKASHVTMVGVLSACAKIR 246
Query: 265 NCEAAFNMMLAEGIKPSIVSYN-----ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
N E F + I+ + V+ N A++ Y G ++A +F+ +++ D V+
Sbjct: 247 NLE--FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK----DNVT 300
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
+T++L+ Y S+ + AR V + + ++V++NALI AY NG ++A+ + E++
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQK----DIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 380 -QDGIQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNV 435
Q ++ N +++ + L+AC +Q G +E + S + GI++N ++ I Y
Sbjct: 357 LQKNMKLNQITLVSTLSAC---AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC 413
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVY 495
G+ +K+ ++ S+ K+ D ++ +I G EA+ +M + + +
Sbjct: 414 GDLEKSREVFNSVEKR----DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 496 SSILCAYSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAG 541
+++ CA S G + EAES F+ M+S+ G P+ Y ++D +G
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 187/436 (42%), Gaps = 25/436 (5%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
FPFLIK + S+ M + + + N +I + +D A +F +
Sbjct: 134 FPFLIKAAAEVSSLS-LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+E D ++N++IN + G A+ + M + S T +++AC N
Sbjct: 193 KE----KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+ VC + +N V +L N +L + A F+ M+ D T +
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME----EKDNVTWTTM 304
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN-MMLA 275
+ Y+ A ++ NSM +K D+V++ ++I Y +G+ F+ + L
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQK------DIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+ +K + ++ + + A A G + + + IK++G R + ++L++ Y + +K
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+R VF ++ K ++ ++A+I +G ++A+ + +M++ ++PN V+ +
Sbjct: 419 SREVFNSVE----KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFC 474
Query: 396 ACGRCSQKGKIETVLSAAQMR-GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
AC + E++ + GI Y + G +KA+ ++M I
Sbjct: 475 ACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM---PIP 531
Query: 455 ADSVTYTILISGSCKM 470
+ + L+ G+CK+
Sbjct: 532 PSTSVWGALL-GACKI 546
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 201/457 (43%), Gaps = 33/457 (7%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
+I Q+GS + +F+ M+++ + + ++ A+ ++ R + ++E
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC-AKIRNLEFGRQVCSYIEEN 261
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
R + NA+++ + + G A + D M T+ +++ S +++ A
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDYEAA 317
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTTTLNIVIH 218
V M D+V N L+SA++ + ++AL F EL +++ + TL +
Sbjct: 318 REVLNSMPQK----DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
++ + I + +++ + V S ++IH+YS G +E FN +
Sbjct: 374 ACAQVGALELGRWIHSYIKKHGIRMNFHVTS--ALIHMYSKCGDLEKSREVFNSVE---- 427
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
K + ++A++G A HG G EA+ +F ++++ +P+ V++T++ A + +A
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 339 VFEMIKRN-KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+F ++ N + P Y ++D G +G L+ A+K + M I P+ LL AC
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP---IPPSTSVWGALLGAC 544
Query: 398 GRCSQKGKIETVLSAAQMRGIKL------NTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
KI L+ A+M +L N A+ Y +G+++ L K MR
Sbjct: 545 -------KIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVT 597
Query: 452 KIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
+K + +I I G G+ M E ++ KL
Sbjct: 598 GLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 173/387 (44%), Gaps = 24/387 (6%)
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL-SYFELMKGTHIRPDTTTLNIVI 217
+L +K+ D P+ N L+ A+ SG ++ ++ +++ + P+ T +I
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 218 HCLVKLRQYDKAIDIFNSMR--EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
++ ++ + S+ KS DV S+IH Y G +++ F +
Sbjct: 139 KAAAEV----SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK- 193
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+ +VS+N+++ + G +AL +F +++ + V+ +L+A + + +
Sbjct: 194 ---EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
R V I+ N++ NL NA++D Y G ++DA ++ ME+ + V+ T+L
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTMLD 306
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR-KKKIK 454
VL++ + I VA+N+ I +Y G+ ++AL ++ ++ +K +K
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDI----VAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
+ +T +S ++ + + ++ V S+++ YSK G + ++
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAG 541
FN ++ DV +++M+ G
Sbjct: 423 FNSVEKR----DVFVWSAMIGGLAMHG 445
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 19/234 (8%)
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKI---LREMEQDGIQPNVVSICT 392
AR VF+ I KPN ++N LI AY S D + I L + + PN +
Sbjct: 83 ARKVFDEIP----KPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPF 136
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
L+ A S +++ A + + NS I Y + G+ D A ++ ++++K
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK- 195
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
D V++ +I+G + +AL ++M + S +L A +K +
Sbjct: 196 ---DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN-----FEPLKYEDGF-WKCMLE 560
+ ++ + + ++ +MLD YT G + F+ ++ +D W ML+
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 306
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 187/386 (48%), Gaps = 14/386 (3%)
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR-PDTTTLNIVIHCLVK 222
K G + T+++LL ++ + MK R ++ LN++ H +
Sbjct: 78 KASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRH-FSR 136
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE-----AAFNMMLAEG 277
+DK +++FN + + + P + + ++ ++L SG++ A N+ G
Sbjct: 137 SDLHDKVMEMFN-LIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNL----G 191
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR-PDIVSYTSLLNAYGRSQKPQKA 336
++P+ +N LV + +G A LV E+K++G P+ ++Y++L++ + ++A
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 337 RGVFE-MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+FE MI + + P+ V++N +I+ + G ++ A KIL M+++G PNV + L+
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
+ + + + + G+KL+TV Y + + + GE D+A+ L M+ + +A
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
D++TY +++ G + EAL +++ + ++K Y IL A G++ +A
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAG 541
++M G P T+ ++ +G
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESG 457
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 142/299 (47%), Gaps = 11/299 (3%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP-PSRSTYNNLINACGSSGNWKEAL 160
+P+ +N L+ H + G +A ++++M R+ I P+ TY+ L++ + KEA+
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 161 NVCKKM-TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ + M + G+ PD VT N++++ F + +A + MK P+ + +++
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
K+ + +A F+ + KK+ D V YT++++ + +G+ + M A +
Sbjct: 313 FCKVGKIQEAKQTFDEV--KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
++YN ++ ++ G +EAL + ++ G + SY +LNA + + +KA
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN-------VVSIC 391
++ + P+ ++N L+ +G + +++L + G+ P V SIC
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 144/323 (44%), Gaps = 5/323 (1%)
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIV 283
R +DIFN ++K H + +Y+ ++ + +A + M E +
Sbjct: 67 RDPQGVLDIFNKASQQKGFNHNNA-TYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQES 125
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQNG-FRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
+ L+ ++ + + + +FN I+ +P + + ++ LN S + +R +
Sbjct: 126 LFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLY 185
Query: 343 IKRN-KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ-PNVVSICTLLAAC-GR 399
K N L+PN +N L+ + NG ++ A ++ EM++ GI PN ++ TL+
Sbjct: 186 AKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAH 245
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
K +E GI + V +N I + GE ++A + M+K +
Sbjct: 246 SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN 305
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
Y+ L++G CK+ K EA +E+ L + Y++++ + + G+ EA MK
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 520 SSGCSPDVVTYTSMLDAYTAAGK 542
+S C D +TY +L ++ G+
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGR 388
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 112/275 (40%), Gaps = 23/275 (8%)
Query: 36 NFPFLIKELTQRGSIEHCNLV---------------------FQWMKNQRNYCARNDIYN 74
NF FL+ E +R I + N + F+ M ++ +N
Sbjct: 213 NFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFN 272
Query: 75 MMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA 134
+MI R +++A+ + M++ C P+ Y+AL+N + G+ + A D++ +
Sbjct: 273 VMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKT 332
Query: 135 AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKA 194
+ Y L+N +G EA+ + +M + D +T+N++L S + +A
Sbjct: 333 GLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Query: 195 LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII 254
L + + + + I+++ L + +KA+ + M E+ P ++ ++
Sbjct: 393 LQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG--IWPHHATWNELV 450
Query: 255 HLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
SG E L G+ P S+ A+V
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 160/350 (45%), Gaps = 9/350 (2%)
Query: 139 SRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP--DLVTHNILLSAFKSGSQYSKAL- 195
S TYN +++ G N+ + +M N L T + ++ +Y+KA+
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
++ E+ K ++ DT +N ++ LVK + A ++F + + PD ++ +IH
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT---IKPDARTFNILIH 281
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
+ + + ++ A ++M P +V+Y + V AY G + + E+++NG P
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
++V+YT ++++ G+S++ +A GV+E +K + P+ Y++LI G DA +I
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 376 REMEQDGIQPNVVSICTLLAAC---GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+M G++ +V+ T+++A R ++ + + N Y +
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMC 461
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
+ + L M K + D TY +LI G C K EA F EE
Sbjct: 462 CHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEE 511
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 156/345 (45%), Gaps = 8/345 (2%)
Query: 55 LVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQE-WRCKPDAETYNALIN 113
LV + KN+ + D + ++R A+ + ++A F EM++ + K D N+L++
Sbjct: 188 LVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMD 247
Query: 114 AHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP 173
A + A + + P +R T+N LI+ + + +A + M P
Sbjct: 248 ALVKENSIEHAHEVFLKLFDTIKPDAR-TFNILIHGFCKARKFDDARAMMDLMKVTEFTP 306
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
D+VT+ + A+ + + E M+ P+ T IV+H L K +Q +A+ ++
Sbjct: 307 DVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVY 366
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
M+E C PD Y+S+IH+ S +G+ ++ F M +G++ ++ YN ++ A
Sbjct: 367 EKMKEDG--CVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAAL 424
Query: 294 AHGMGKEALLVFNEIKQ---NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
H + AL + ++ P++ +Y LL +K + + + +N +
Sbjct: 425 HHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSI 484
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
++ +Y LI +G +++A E + G+ P S C +L
Sbjct: 485 DVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPR-DSTCKMLV 528
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 161/352 (45%), Gaps = 5/352 (1%)
Query: 212 TLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF- 270
T N ++ L K R +D ++ N M + + + + + ++ + SG+ AF
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
M + G+K ++ N+L+ A + A VF ++ + +PD ++ L++ + ++
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKA 286
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
+K AR + +++K + P++V+Y + ++AY G ++L EM ++G PNVV+
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 391 CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
++ + G+ Q + V + G + Y+S I G + A +++ M
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK---LPVSKEVYSSILCAYSKQGQ 507
+ ++ D + Y +IS + S+ AL ++ M + + E Y+ +L + +
Sbjct: 407 QGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKK 466
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYEDGFWKCML 559
+ + M + S DV TY ++ +GK+ L +E+ K M+
Sbjct: 467 MKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMV 518
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 146/324 (45%), Gaps = 14/324 (4%)
Query: 59 WMKNQRNYCARNDIYNMMIRLHA--RHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
+++ +++Y + D M + A + N I+ A +F ++ + KPDA T+N LI+
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFC 284
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
+A ++ A +MD M P TY + + A G+++ + ++M +NG P++V
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
T+ I++ + Q ++AL +E MK PD + +IH L K ++ A +IF M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMML------AEGIKPSIVSYNALVG 290
+ DV+ Y ++I S + E A ++ E P++ +Y L+
Sbjct: 405 TNQG--VRRDVLVYNTMI---SAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLK 459
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
K ++ + + +N D+ +Y L+ S K ++A FE R + P
Sbjct: 460 MCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Query: 351 NLVSYNALIDAYGSNGLLDDAIKI 374
+ L+D + + +KI
Sbjct: 520 RDSTCKMLVDELEKKNMAEAKLKI 543
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 138/309 (44%), Gaps = 9/309 (2%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM--QEWRCKPDAETYNALINA 114
F W +Q Y YN M+ + + D L EM E +T + ++
Sbjct: 153 FIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRR 212
Query: 115 HGRAGQWRWAMNIMDDMLRA-AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP 173
++G++ A++ +M ++ + N+L++A + + A V K+ D + P
Sbjct: 213 LAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKP 271
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
D T NIL+ F ++ A + +LMK T PD T + K + + ++
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
MRE + C+P+VV+YT ++H S Q+ + M +G P Y++L+ +
Sbjct: 332 EEMRE--NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 294 AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK---LKP 350
G K+A +F ++ G R D++ Y ++++A + + A + + ++ + P
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSP 449
Query: 351 NLVSYNALI 359
N+ +Y L+
Sbjct: 450 NVETYAPLL 458
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 3/289 (1%)
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
E + K + YN L+++ R G + +ML + P T+N L+N G
Sbjct: 113 EIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVV 172
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
EA + G PD T+ ++ + A F+ M + + +I
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI 232
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
+ L + ++ D+A+ + M++ C P+V +YT +I SGQ F M G
Sbjct: 233 YGLFEAKKIDEALSLLVKMKD--DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG 290
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
IKP Y L+ ++ + EA + + +NG P++++Y +L+ + + + KA
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAM 349
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
G+ + L P+L++YN LI S+G LD A ++L ME+ G+ PN
Sbjct: 350 GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 131/261 (50%), Gaps = 9/261 (3%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
YNNL+++ G +E + +M ++ V PD+ T N L++ + +A Y +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 203 GTHIRPD--TTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVS 260
PD T T I HC + ++ D A +F M + CH + VSYT +I+ +
Sbjct: 183 QAGCDPDYFTYTSFITGHC--RRKEVDAAFKVFKEMTQNG--CHRNEVSYTQLIYGLFEA 238
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
+I+ + M + P++ +Y L+ A G EA+ +F ++ ++G +PD Y
Sbjct: 239 KKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
T L+ ++ +A G+ E + N L PN+++YNALI + + A+ +L +M +
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLE 357
Query: 381 DGIQPNVVSICTLLAACGRCS 401
+ P++++ TL+A G+CS
Sbjct: 358 QNLVPDLITYNTLIA--GQCS 376
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 1/277 (0%)
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
Y +++ + G +E + + ML + + P I ++N LV Y G EA +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
Q G PD +YTS + + R ++ A VF+ + +N N VSY LI +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAI 429
+A+ +L +M+ D PNV + L+ A QK + + GIK + Y I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 430 GSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLP 489
S+ + D+A GL + M + + + +TY LI G CK + + +A+ + +M+ L
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKMLEQNLV 361
Query: 490 VSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
Y++++ G + A +LM+ SG P+
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 35/253 (13%)
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
YN L+ + A G+ +E ++ E+ ++ PDI ++ +L+N Y + +A+ +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
+ P+ +Y + I + +D A K+ +EM Q+G C R
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG--------------CHR----- 223
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
N V+Y I + D+AL L M+ + TYT+LI
Sbjct: 224 ----------------NEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
C + EA++ ++M + +Y+ ++ ++ + EA M +G
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 525 PDVVTYTSMLDAY 537
P+V+TY +++ +
Sbjct: 328 PNVITYNALIKGF 340
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
FE+ + KL P YN L+ + GL+++ ++ EM +D + P++ + TL+ G
Sbjct: 112 FEI--KYKLTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVN--GY 165
Query: 400 CSQKGKIETVLSAAQ------MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
C K+ V+ A Q G + Y S I + E D A ++K M +
Sbjct: 166 C----KLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGC 221
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ V+YT LI G + K EALS + +M + Y+ ++ A GQ EA +
Sbjct: 222 HRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMN 281
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
F M SG PD YT ++ ++ + ++
Sbjct: 282 LFKQMSESGIKPDDCMYTVLIQSFCSGDTLD 312
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 46 QRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPD 104
+R ++ VF+ M +N C RN++ Y +I +ID+A L +M++ C P+
Sbjct: 202 RRKEVDAAFKVFKEM--TQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPN 259
Query: 105 AETYNALINAHGRAGQWRWAMNI-----------------------------------MD 129
TY LI+A +GQ AMN+ ++
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 130 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGS 189
ML + P+ TYN LI N +A+ + KM + + PDL+T+N L++ S
Sbjct: 320 HMLENGLMPNVITYNALIKG-FCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Query: 190 QYSKALSYFELMKGTHIRPDTTTL 213
A LM+ + + P+ T+
Sbjct: 379 NLDSAYRLLSLMEESGLVPNQRTV 402
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 159/324 (49%), Gaps = 3/324 (0%)
Query: 60 MKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG 119
M+ + +++ ++++ A + + +A + EM ++ +PD + L++A + G
Sbjct: 173 MRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHG 232
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
+ A + +DM R P + + +L+ G EA V +M + G PD+V +
Sbjct: 233 SVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYT 291
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
LLS + + + + A M+ P+ ++I L K+ + ++A+ +F M +
Sbjct: 292 NLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM--E 349
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
+ EC DVV+YT+++ + G+I+ C + M+ +G+ PS ++Y ++ A+ +
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
E L + +++Q + PDI Y ++ + + ++A ++ ++ N L P + ++ +I
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 360 DAYGSNGLLDDAIKILREMEQDGI 383
+ S G L +A +EM G+
Sbjct: 470 NGLASQGCLLEASDHFKEMVTRGL 493
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 150/327 (45%), Gaps = 4/327 (1%)
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSE-CHPDVVSYTSIIHLYSVSGQIENCEAAFNMML 274
++ L K+RQ+ + MR++ + P++ + ++ ++ + ++ + M
Sbjct: 153 MVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIEVLDEMP 210
Query: 275 AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQ 334
G +P + L+ A HG K+A +F +++ F ++ +TSLL + R K
Sbjct: 211 KFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMM 269
Query: 335 KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL 394
+A+ V + +P++V Y L+ Y + G + DA +LR+M + G +PN L+
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
Query: 395 AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
A + + + V + + + V Y + + + G+ DK + M KK +
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
+TY ++ K + E L ME+M ++ +Y+ ++ K G++ EA
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+N M+ +G SP V T+ M++ + G
Sbjct: 450 WNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 172/420 (40%), Gaps = 15/420 (3%)
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 165
++Y L H R + A+N LR + ++N CG +GN V
Sbjct: 85 KSYRILRKFHSRVPKLELALNESGVELRPGL------IERVLNRCGDAGNLGYRFFVWAA 138
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH---IRPDTTTLNIVIHCLVK 222
+ + ++ Q+ E M+ + I P+ +++
Sbjct: 139 KQPRYCH-SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFAS 195
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
KAI++ + M K PD + ++ G +++ F M ++
Sbjct: 196 ADMVKKAIEVLDEM--PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNL 252
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
+ +L+ + G EA V ++ + GF PDIV YT+LL+ Y + K A +
Sbjct: 253 RYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRD 312
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
++R +PN Y LI A +++A+K+ EME+ + +VV+ L++ + +
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 403 KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
K VL +G+ + + Y + ++ +++ L L + MR+ + D Y +
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 463 LISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
+I +CK+ + EA+ EM L + + ++ + QG ++EA F M + G
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 39/249 (15%)
Query: 63 QRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
+R + + Y ++I+ + +R+++A +F EM+ + C+ D TY AL++ + G+
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKID 374
Query: 123 WAMNIMDDMLRAAIPPSRST-----------------------------------YNNLI 147
++DDM++ + PS T YN +I
Sbjct: 375 KCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM--KGTH 205
G KEA+ + +M +NG+ P + T I+++ S +A +F+ M +G
Sbjct: 435 RLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH-LYSVSGQIE 264
TL ++++ ++K ++ + A D+++ + K + C +V+S+T IH L+S + E
Sbjct: 495 SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGA-CELNVLSWTIWIHALFSKGYEKE 553
Query: 265 NCEAAFNMM 273
C M+
Sbjct: 554 ACSYCIEMI 562
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 8/240 (3%)
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS---YNALIDAYGSN 365
KQ + I Y S++ + ++ G+ E +++ P L+ + L+ + S
Sbjct: 139 KQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKEN--PQLIEPELFVVLVQRFASA 196
Query: 366 GLLDDAIKILREMEQDGIQPN-VVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVA 424
++ AI++L EM + G +P+ V C L A C S K + + +MR +N
Sbjct: 197 DMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK-LFEDMRMR-FPVNLRY 254
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
+ S + + VG+ +A + M + + D V YT L+SG K +A + +M
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ Y+ ++ A K ++ EA F M+ C DVVTYT+++ + GK++
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKID 374
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 198/441 (44%), Gaps = 39/441 (8%)
Query: 138 PSR--STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
P R +T+N +++ SG+ +A ++ ++M N + PD VT L+ + + + K+L
Sbjct: 114 PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS----ASFEKSL 169
Query: 196 SYFELMKGTHIR----PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
E M IR T N I K D A +F ++ VVS+
Sbjct: 170 KLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRT----VVSWN 225
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
S+ YSV G+ + + +ML E KP + ++ L + + L+ +
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHL 285
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G DI + + ++ Y +S+ AR +F+++ VS+ +I Y G +D+A
Sbjct: 286 GTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR----TCVSWTVMISGYAEKGDMDEA 341
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAY-NS 427
+ + M + G +P++V++ +L++ CG+ G +ET + + A + G K + V N+
Sbjct: 342 LALFHAMIKSGEKPDLVTLLSLISGCGKF---GSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK 487
I Y G +A ++ + +K + VT+T +I+G + EAL +M+ L
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTV----VTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Query: 488 LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKMNFE 546
+ + ++L A + G + + F++MK SP + Y+ M+D GK+ E
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLE-E 513
Query: 547 PL--------KYEDGFWKCML 559
L K + G W +L
Sbjct: 514 ALELIRNMSAKPDAGIWGALL 534
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 174/427 (40%), Gaps = 24/427 (5%)
Query: 127 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFK 186
+ +M R P+ T+ + AC + V + + D+ + F
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+ A FE M D TT N ++ + DKA +F MR +E PD
Sbjct: 99 KCNSVDYAAKVFERMP----ERDATTWNAMLSGFCQSGHTDKAFSLFREMR--LNEITPD 152
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
V+ ++I S ++ EA + + G+ + N + Y G A LVF
Sbjct: 153 SVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFE 212
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
I + G R +VS+ S+ AY + A G++ ++ R + KP+L ++ L + +
Sbjct: 213 AIDR-GDRT-VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLN--TVA 424
L I G ++ +I T + S K E SA + I + V+
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFI------SMYSKSEDTCSARLLFDIMTSRTCVS 324
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS--KYGEALSFMEE 482
+ I Y G+ D+AL L+ +M K K D VT LISG K + G+ + +
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD 384
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
+ K + + ++++ YSK G I EA F+ + VVT+T+M+ Y G
Sbjct: 385 IYGCKRD-NVMICNALIDMYSKCGSIHEARDIFD----NTPEKTVVTWTTMIAGYALNG- 438
Query: 543 MNFEPLK 549
+ E LK
Sbjct: 439 IFLEALK 445
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 179/455 (39%), Gaps = 55/455 (12%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+ N I + + +D A+ L FE + R ++N++ A+ G+ A + M
Sbjct: 190 VANTWISTYGKCGDLDSAK-LVFEAID-RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL---------------- 175
LR P ST+ NL +C + + + G D+
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 176 ---------------VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
V+ +++S + +AL+ F M + +PD TL +I
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 221 VKL------RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMML 274
K + D DI+ R+ C+ ++I +YS G I F+
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICN-------ALIDMYSKCGSIHEARDIFD--- 417
Query: 275 AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQ 334
+ ++V++ ++ YA +G+ EAL +F+++ ++P+ +++ ++L A S +
Sbjct: 418 -NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 335 KARGVFEMIKR-NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
K F ++K+ + P L Y+ ++D G G L++A++++R M +P+ L
Sbjct: 477 KGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA---KPDAGIWGAL 533
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
L AC + + KI + + Y Y G +D + M+++ I
Sbjct: 534 LNAC-KIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNI 592
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
K I ++G GE E+++ L
Sbjct: 593 KKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTL 627
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 174/415 (41%), Gaps = 47/415 (11%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM- 131
+N M+ + D+A LF EM+ PD+ T LI ++ + ++ +++ M
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI----QSASFEKSLKLLEAMH 176
Query: 132 ---LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
+R + + N I+ G G+ A V + + D G +V+ N + A+
Sbjct: 177 AVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI-DRG-DRTVVSWNSMFKAYSVF 234
Query: 189 SQYSKALSYFELMKGTHIRPDTTT-LNIVIHC-----LVKLR------------QYDKAI 230
+ A + LM +PD +T +N+ C L + R Q +AI
Sbjct: 235 GEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAI 294
Query: 231 DIFNSMREKKSE-CHPDV----------VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
+ F SM K + C + VS+T +I Y+ G ++ A F+ M+ G K
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEK 354
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD-IVSYTSLLNAYGRSQKPQKARG 338
P +V+ +L+ G + + G + D ++ +L++ Y + +AR
Sbjct: 355 PDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+F+ N + +V++ +I Y NG+ +A+K+ +M +PN ++ +L AC
Sbjct: 415 IFD----NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACA 470
Query: 399 RCS--QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
+KG E Q+ I Y+ + G+ ++AL L ++M K
Sbjct: 471 HSGSLEKG-WEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK 524
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 41/208 (19%)
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL---------------SAAQ 414
+++ + REM++ G +PN + + AC R + G E V +A
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 415 MRGIKLNTVAY----------------NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+K N+V Y N+ + + G DKA L++ MR +I DSV
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 459 TYTILISGSCKMSKYGEALSFMEEM----MHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
T LI + + + ++L +E M + L + V V ++ + Y K G + A+
Sbjct: 155 TVMTLI----QSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
F + VV++ SM AY+ G+
Sbjct: 211 FEAIDRG--DRTVVSWNSMFKAYSVFGE 236
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 196/433 (45%), Gaps = 43/433 (9%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKN----------QRNYCARNDIYNMMIRLHARHNRIDQA 89
LI QRG +E +F + + + +C +N MI+ + + + A
Sbjct: 241 LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSA 300
Query: 90 RGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS--TYNNLI 147
R LF +M++ D ++N +I+ + + A + +M P+R ++N ++
Sbjct: 301 RLLFDQMKD----RDTISWNTMIDGYVHVSRMEDAFALFSEM------PNRDAHSWNMMV 350
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
+ S GN + A + +K + V+ N +++A++ Y +A+ F M +
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHT----VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 208 PDTTTLNIVIHC---LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
PD TL ++ LV LR + I PDV + ++I +YS G+I
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIV------VKTVIPDVPVHNALITMYSRCGEIM 460
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
F+ M +K ++++NA++G YA HG EAL +F +K NG P +++ S+L
Sbjct: 461 ESRRIFDEM---KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVL 517
Query: 325 NAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
NA + +A+ F M+ K++P + Y++L++ G ++A+ I+ M
Sbjct: 518 NACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---F 574
Query: 384 QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALG 443
+P+ LL AC R + V + A R ++ Y Y ++G +D+A
Sbjct: 575 EPDKTVWGALLDAC-RIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQ 633
Query: 444 LYKSMRKKKIKAD 456
+ +M K+IK +
Sbjct: 634 VRMNMESKRIKKE 646
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 125/572 (21%), Positives = 237/572 (41%), Gaps = 107/572 (18%)
Query: 41 IKELTQRGSIEHCNLVFQWMKNQRNYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEW 99
+ ++ + G I +F+ ++ ARN + +N MI + + ++QAR LF M
Sbjct: 47 LNQMIRSGYIAEARDIFEKLE------ARNTVTWNTMISGYVKRREMNQARKLFDVMP-- 98
Query: 100 RCKPDAETYNALINAHGRAGQWRW---AMNIMDDMLRAAIPPSRSTY--NNLINACGSSG 154
K D T+N +I+ + G R+ A + D+M PSR ++ N +I+ +
Sbjct: 99 --KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEM------PSRDSFSWNTMISGYAKNR 150
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
EAL + +KM + + V+ + +++ F + A+ F M D++ L
Sbjct: 151 RIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMP----VKDSSPLC 202
Query: 215 IVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM- 273
++ L+K + +A + S V +Y ++I Y GQ+E F+ +
Sbjct: 203 ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP 262
Query: 274 ----------LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
E ++VS+N+++ AY G A L+F+++K D +S+ ++
Sbjct: 263 DLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTM 318
Query: 324 LNAYGRSQKPQKARGVF-EMIKRNKLKPNL--------------------------VSYN 356
++ Y + + A +F EM R+ N+ VS+N
Sbjct: 319 IDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWN 378
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC--------GRCSQKGKIET 408
++I AY N +A+ + M +G +P+ ++ +LL+A G + ++T
Sbjct: 379 SIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT 438
Query: 409 VLSAAQMRG-----------------------IKLNTVAYNSAIGSYLNVGEYDKALGLY 445
V+ + +K + +N+ IG Y G +AL L+
Sbjct: 439 VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLF 498
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHL-KLPVSKEVYSSILCAYSK 504
SM+ I +T+ +++ EA + MM + K+ E YSS++ S
Sbjct: 499 GSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSG 558
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
QGQ EA ++ S PD + ++LDA
Sbjct: 559 QGQFEEA---MYIITSMPFEPDKTVWGALLDA 587
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 186/445 (41%), Gaps = 7/445 (1%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
K D YNA R G +R A + + M PPS + LI +
Sbjct: 155 KHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYY 214
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
V +KM G P + +N ++ A + AL+ +E K + ++TT I++ L
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K + ++ ++I MRE + C PDV +YT++I G ++ ++ M + IKP
Sbjct: 275 KAGRIEEMLEILQRMRE--NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPD 332
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+++Y LV G + +F E+K D Y L+ + K + A ++E
Sbjct: 333 VMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWE 392
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ + ++ YNA+I S +D A K+ + ++ ++P+ ++ ++ A +
Sbjct: 393 DLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMN 452
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL--YKSMRKKKIKADSVT 459
+ VL G ++ Y + L E A+ L + ++ K + SV
Sbjct: 453 RLSDFSNVLERIGELGYPVSD--YLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSV- 509
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
Y IL+ KM ++LS EM L YS +C + ++G + A S +
Sbjct: 510 YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKII 569
Query: 520 SSGCSPDVVTYTSMLDAYTAAGKMN 544
C P + Y S+ G+++
Sbjct: 570 EMSCVPSIAAYLSLTKGLCQIGEID 594
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/508 (19%), Positives = 210/508 (41%), Gaps = 57/508 (11%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+ ++IR+HA + R + ++ +M+++ KP YN +++A + G + A+ + +D
Sbjct: 196 FEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFK 255
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ +T+ L+ +G +E L + ++M +N PD+ + ++ S
Sbjct: 256 EDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLD 315
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+L ++ M+ I+PD ++ L K + ++ ++F M+ K+ ++ Y
Sbjct: 316 ASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREI--YRV 373
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + G++ + + ++ G I YNA++ + +A +F +
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 313 FRPDIVSYTSLLNAY-----------------------------------GRSQKPQKAR 337
PD + + ++ AY +K A
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMAL 493
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN----VVSICTL 393
VF ++K K ++ YN L++A G + ++ + EM + G +P+ ++IC
Sbjct: 494 DVFYILK-TKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTV----AYNSAIGSYLNVGEYDKALGLYKS-M 448
+ +KG ++ S + + I+++ V AY S +GE D + L + +
Sbjct: 553 V-------EKGDVKAACSFHE-KIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECL 604
Query: 449 RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQI 508
+ Y + + CK S + + ++EM + +++ +Y +I+ SK G I
Sbjct: 605 GNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTI 664
Query: 509 VEAESTFNLMKSSGC--SPDVVTYTSML 534
A F +K D+V Y ML
Sbjct: 665 KVAREVFTELKKRKVMTEADMVVYEEML 692
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+G K +YNA +G + A + + G P + L+ + +++ +
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
V+E +K+ KP + YN ++DA NG D A+ + + ++DG+ + L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 396 ACGRCSQKGKIETVLSAAQ-MRG--IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
G C + G+IE +L Q MR K + AY + I + ++ G D +L ++ MR+ +
Sbjct: 272 --GLC-KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
IK D + Y L+ G CK + EM ++ + +E+Y ++ + G++ A
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ + + SG D+ Y +++ + +++
Sbjct: 389 NLWEDLVDSGYIADIGIYNAVIKGLCSVNQVD 420
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 221/493 (44%), Gaps = 75/493 (15%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI Q G +E + VF R+ + Y +I+ +A I+ A+ LF E+
Sbjct: 175 LISMYVQNGRLEDAHKVFD-KSPHRDVVS----YTALIKGYASRGYIENAQKLFDEIP-- 227
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
D ++NA+I+ + G ++ A+ + DM++ + P ST +++AC SG+ +
Sbjct: 228 --VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 160 LNVCKKMTDNGVGP-------------------------------DLVTHNILLSAFKSG 188
V + D+G G D+++ N L+ +
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 189 SQYSKALSYF-ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI---FNSMREKKSECH 244
+ Y +AL F E+++ D T L+I+ C + AIDI + +K+ +
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPAC-----AHLGAIDIGRWIHVYIDKRLKGV 400
Query: 245 PDVVSY-TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
+ S TS+I +Y+ G IE FN +L + S+ S+NA++ +A HG +
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK----SLSSWNAMIFGFAMHGRADASFD 456
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAY 362
+F+ +++ G +PD +++ LL+A S R +F + ++ K+ P L Y +ID
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL-- 420
G +GL +A +++ ME +P+ V C+LL A C G +E S A+ IK+
Sbjct: 517 GHSGLFKEAEEMINMMEM---EPDGVIWCSLLKA---CKMHGNVELGESFAE-NLIKIEP 569
Query: 421 -NTVAYNSAIGSYLNVGEYD-----KALGLYKSMRK----KKIKADSVTYTILISGSCKM 470
N +Y Y + G ++ +AL K M+K I+ DSV + +I G
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII-GDKFH 628
Query: 471 SKYGEALSFMEEM 483
+ E +EEM
Sbjct: 629 PRNREIYGMLEEM 641
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 183/459 (39%), Gaps = 59/459 (12%)
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 148
A +F +QE P+ +N + H + A+ + M+ + P+ T+ ++
Sbjct: 87 AISVFKTIQE----PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 142
Query: 149 ACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRP 208
+C S +KE + + G DL H L+S + + A F
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF---------- 192
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
DK+ H DVVSYT++I Y+ G IEN +
Sbjct: 193 ------------------DKSP-------------HRDVVSYTALIKGYASRGYIENAQK 221
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
F+ + + +VS+NA++ YA G KEAL +F ++ + RPD + ++++A
Sbjct: 222 LFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
+S + R V I + NL NALID Y G L+ A + + +V+
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVI 333
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD--KALGLYK 446
S TL+ + + + G N V S + + ++G D + + +Y
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQG 506
R K + S T LI K A ++H L +++++ ++ G
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL----SSWNAMIFGFAMHG 449
Query: 507 QIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNF 545
+ + F+ M+ G PD +T+ +L A + +G ++
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 207/424 (48%), Gaps = 35/424 (8%)
Query: 130 DMLRAAIP-PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
D++ +IP P+ ++++LI A + + +++ V +M +G+ PD ++L + FK
Sbjct: 70 DLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD---SHVLPNLFKVC 126
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNI-------VIHCLVKLRQYDKAIDIFNSMREKKS 241
++ LS F++ K H + L++ + H ++ + A +F+ M +K
Sbjct: 127 AE----LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK-- 180
Query: 242 ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEA 301
DVV+ ++++ Y+ G +E + M + GI+ +IVS+N ++ + G KEA
Sbjct: 181 ----DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEA 236
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
+++F +I GF PD V+ +S+L + G S+ R + + + L + +A+ID
Sbjct: 237 VVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDM 296
Query: 362 YGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM---RGI 418
YG +G + I + + E +C A S+ G ++ L ++ + +
Sbjct: 297 YGKSGHVYGIISLFNQFEM-----MEAGVCN--AYITGLSRNGLVDKALEMFELFKEQTM 349
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
+LN V++ S I G+ +AL L++ M+ +K + VT ++ ++ G S
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS 409
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
+ + L + V S+++ Y+K G+I ++ FN+M + ++V + S+++ ++
Sbjct: 410 THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK----NLVCWNSLMNGFS 465
Query: 539 AAGK 542
GK
Sbjct: 466 MHGK 469
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 210/494 (42%), Gaps = 76/494 (15%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
M ++ R R+ AR +F M + D T +AL+ A+ R G + I+ +M +
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSD----KDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF---------- 185
I + ++N +++ SG KEA+ + +K+ G PD VT + +L +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 186 --------------------------KSGSQYS--KALSYFELMKGTHIRPDTTTLNIVI 217
KSG Y + FE+M + N I
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMM-------EAGVCNAYI 325
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
L + DKA+++F +E+ E +VVS+TSII + +G+ F M G
Sbjct: 326 TGLSRNGLVDKALEMFELFKEQTMEL--NVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 278 IKPSIVSYNALVGAYA-----AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
+KP+ V+ +++ A HG V + N + ++L++ Y + +
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN-----VHVGSALIDMYAKCGR 438
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
++ VF M+ NLV +N+L++ + +G + + I + + ++P+ +S +
Sbjct: 439 INLSQIVFNMMPTK----NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTS 494
Query: 393 LLAACGRCS---QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMR 449
LL+ACG+ + K ++S + GIK Y+ + G+ +A L K M
Sbjct: 495 LLSACGQVGLTDEGWKYFKMMS--EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM- 551
Query: 450 KKKIKADSVTYTILISGSCKMSKYGEALSF-MEEMMHLKLPVSKEVYSSILCAYSKQGQI 508
+ DS + L++ SC++ + E++ HL+ P + Y + Y+ +G
Sbjct: 552 --PFEPDSCVWGALLN-SCRLQNNVDLAEIAAEKLFHLE-PENPGTYVLLSNIYAAKGMW 607
Query: 509 VEAESTFNLMKSSG 522
E +S N M+S G
Sbjct: 608 TEVDSIRNKMESLG 621
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 136/338 (40%), Gaps = 70/338 (20%)
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD-------- 316
NC +++L P+I S+++L+ A + +++ VF+ + +G PD
Sbjct: 64 NCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLF 123
Query: 317 ----------------IVSYT-----------SLLNAYGRSQKPQKARGVFEMIKRNKLK 349
VS S+ + Y R + AR VF+ +
Sbjct: 124 KVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK--- 180
Query: 350 PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETV 409
++V+ +AL+ AY G L++ ++IL EME GI+ N+VS +L+ R + +
Sbjct: 181 -DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVM 239
Query: 410 LSAAQMRGIKLNTVAYNSAIGSY-----LNVGEYDKALGLYKSMRKKKIKADSVT----- 459
G + V +S + S LN+G + + + K K ++
Sbjct: 240 FQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
Query: 460 -------------YTILISGSCK-----MSKYG---EALSFMEEMMHLKLPVSKEVYSSI 498
+ ++ +G C +S+ G +AL E + ++ ++SI
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
+ ++ G+ +EA F M+ +G P+ VT SML A
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 163/367 (44%), Gaps = 3/367 (0%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F W+K++ + YN+ ++ + + EM + + D TY+ +I
Sbjct: 173 FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAK 232
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
R + A+ + M + + P TY+ +++ SG +E L++ ++ G PD +
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 292
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
++L F Y + MK ++P+ N ++ + + + A +FN M
Sbjct: 293 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
E + P+ + T+++ +Y + + + M A+ + YN L+ A G
Sbjct: 353 LE--AGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIG 410
Query: 297 MGKEALLVFNEIKQN-GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY 355
+ +EA +FN++K++ RPD SYT++LN YG K +KA +FE + + ++ N++
Sbjct: 411 LEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGC 470
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
L+ G +DD + + + G++P+ LL+ C E V++ +
Sbjct: 471 TCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 530
Query: 416 RGIKLNT 422
KL T
Sbjct: 531 ANKKLVT 537
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 37/321 (11%)
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
LR++ K FN ++ KS + + Y + Q + E M+ +G++
Sbjct: 163 LREWQKTHTFFNWVK-SKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDN 221
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
++Y+ ++ + +A+ F + + G PD V+Y+++L+ Y +S K ++ ++E
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
KP+ ++++ L +G G D +L+EM+ ++PNVV TLL A GR +
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 403 KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
G ++ + G+ N + + Y AL L++ M+ KK D + Y
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 463 LISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS- 521
L++ +CA G EAE FN MK S
Sbjct: 402 LLN---------------------------------MCA--DIGLEEEAERLFNDMKESV 426
Query: 522 GCSPDVVTYTSMLDAYTAAGK 542
C PD +YT+ML+ Y + GK
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGK 447
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 156/347 (44%), Gaps = 4/347 (1%)
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRP-DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
L S ++ K ++F +K + P +T N+ + L RQ+ ++ M +
Sbjct: 157 LLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDG 216
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
E D ++Y++II F M G+ P V+Y+A++ Y+ G +E
Sbjct: 217 VEL--DNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
L ++ G++PD ++++ L +G + R V + +K +KPN+V YN L++
Sbjct: 275 VLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
A G G A + EM + G+ PN ++ L+ G+ + + + +
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPM 394
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKK-KIKADSVTYTILISGSCKMSKYGEALSF 479
+ + YN+ + ++G ++A L+ M++ + + D+ +YT +++ K +A+
Sbjct: 395 DFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMEL 454
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
EEM+ + V+ + ++ K +I + F+L G PD
Sbjct: 455 FEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/507 (20%), Positives = 228/507 (44%), Gaps = 67/507 (13%)
Query: 79 LHARHNRIDQARGLFFEMQEWRCKPD--AETYNALINAHGRAGQWRWAMNIMDDMLRAAI 136
++ + +D A +F E+ PD A +NAL+ + + G+ A+ + DM + +
Sbjct: 217 MYGKCGVLDDASKVFDEI------PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGV 270
Query: 137 PPSRSTYNNLINACGSSGNWKE-----ALNVCKKMT-DNGVGP----------------- 173
P+R T + ++A + G +E A+ + M DN +G
Sbjct: 271 EPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEM 330
Query: 174 --------DLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQ 225
D+VT N+++S + A+ +LM+ ++ D TL ++ +
Sbjct: 331 VFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE- 389
Query: 226 YDKAIDIFNSMREKKSECH-------PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
N K+ +C+ D+V ++++ +Y+ G I + + F+ +
Sbjct: 390 --------NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD----STV 437
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
+ ++ +N L+ AYA G+ EAL +F ++ G P+++++ ++ + R+ + +A+
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
+F ++ + + PNL+S+ +++ NG ++AI LR+M++ G++PN SI L+AC
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAY--NSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
+ I + +R ++ +++ S + Y G+ +KA ++ S K+ ++
Sbjct: 558 HLASL-HIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS----KLYSE 612
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF- 515
+IS EA++ + + L +++L A + G I +A F
Sbjct: 613 LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT 672
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGK 542
+++ P + Y M+D +AG+
Sbjct: 673 DIVSKRSMKPCLEHYGLMVDLLASAGE 699
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 210/482 (43%), Gaps = 31/482 (6%)
Query: 48 GSIEHCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDA 105
G IE+ +VF M + D+ +N++I + + ++ A + M+ + K D
Sbjct: 323 GLIEYAEMVFDRMFEK-------DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPS---RSTYNNLINACGSSGNWKEALNV 162
T L++A R + + +R + ST ++ CGS +
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD------- 428
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
KK+ D+ V DL+ N LL+A+ +AL F M+ + P+ T N++I L++
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
Q D+A D+F M + S P+++S+T++++ +G E M G++P+
Sbjct: 489 NGQVDEAKDMFLQM--QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY-TSLLNAYGRSQKPQKARGVFE 341
S + A A + I +N +VS TSL++ Y + KA VF
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF- 605
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+KL L NA+I AY G L +AI + R +E G++P+ ++I +L+AC
Sbjct: 606 ---GSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 402 QKGK-IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
+ IE R +K Y + + GE +KAL L + M K D+
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM---PFKPDARMI 719
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
L++ SC + E + ++ + P + Y +I AY+ +G E +MK+
Sbjct: 720 QSLVA-SCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Query: 521 SG 522
G
Sbjct: 779 KG 780
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 180/396 (45%), Gaps = 45/396 (11%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
++N ++ +A +A LF+ MQ P+ T+N +I + R GQ A ++ M
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ I P+ ++ ++N +G +EA+ +KM ++G+ P+ + + LSA +
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA----CAH 558
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
+L + G IR N+ LV + T
Sbjct: 559 LASLHIGRTIHGYIIR------NLQHSSLVSIE--------------------------T 586
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
S++ +Y+ G I E F L + S NA++ AYA +G KEA+ ++ ++
Sbjct: 587 SLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEGV 642
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
G +PD ++ T++L+A + +A +F +++ + +KP L Y ++D S G +
Sbjct: 643 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEK 702
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
A++++ EM +P+ I +L+A+C + +K ++ LS + N+ Y +
Sbjct: 703 ALRLIEEMP---FKPDARMIQSLVASCNK-QRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
+Y G +D+ + + + M+ K +K I I+G
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITG 794
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 113/524 (21%), Positives = 220/524 (41%), Gaps = 69/524 (13%)
Query: 65 NYCARND-IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
++ ARN+ I ++ +A+ + ++ A LF +++ + ++ A+I R G
Sbjct: 101 DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR----VRNVFSWAAIIGVKCRIGLCEG 156
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW------------KEALNVC-------- 163
A+ +ML I P N+ ACG+ W K L C
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGAL-KWSRFGRGVHGYVVKSGLEDCVFVASSLA 215
Query: 164 ------------KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTT 211
K+ D + V N L+ + + +A+ F M+ + P
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 212 TLNIVIHCLVKLRQYDK-----AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
T++ + + ++ AI I N M D + TS+++ Y G IE
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGM-------ELDNILGTSLLNFYCKVGLIEYA 328
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
E F+ M + +V++N ++ Y G+ ++A+ + ++ + D V+ +L++A
Sbjct: 329 EMVFDRMF----EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 327 YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL-REMEQDGIQP 385
R++ + + V R+ + ++V + ++D Y G + DA K+ +E+D I
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 386 NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
N TLLAA G+ + Q+ G+ N + +N I S L G+ D+A ++
Sbjct: 445 N-----TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL-PVSKEVYSSI-LCAYS 503
M+ I + +++T +++G + EA+ F+ +M L P + + ++ CA+
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 504 KQ---GQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
G+ + NL SS S + TS++D Y G +N
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIE----TSLVDMYAKCGDIN 599
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 177/398 (44%), Gaps = 41/398 (10%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
P+A TYN++IN +AG+ A I DM+++ + + TY L++A G +G+ EAL +
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
C +MT G+ + V +N ++ A+S M +++ D T IV+ L +
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
+A++ + EKK D+V + +++H + ++ + ML +G+
Sbjct: 409 NGYVKEAVEFQRQISEKK--LVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
+S+ L+ Y G + AL +++ + + ++V Y S++N + A V
Sbjct: 467 ISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNA 526
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME-QDGIQPNVVSICTLLAACGRCS 401
++ ++V+YN L++ G +++A IL +M+ QDG +
Sbjct: 527 ME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKS---------------- 566
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
++ V +N I G Y+KA + K M ++ + DS+TY
Sbjct: 567 ------------------VSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYG 608
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
LI+ K + + + ++ + + +Y SI+
Sbjct: 609 TLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 222/506 (43%), Gaps = 18/506 (3%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F L++ TQ G + V + + + +C N + N ID+ ++ EM
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAE-GFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+ T+N +I + + + A+++ ML+ + P+ ++N +I+ +G+
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 157 KEALNVCKK---MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
+ AL + K M+ N V P+ VT+N +++ F + A M + + + T
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
++ + D+A+ + + M K + V Y SI++ + G IE + M
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKG--LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
++ ++ + +V +G KEA+ +I + DIV + +L++ + R +K
Sbjct: 388 NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKL 447
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
A + + L + +S+ LID Y G L+ A++I M + N+V ++
Sbjct: 448 ACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSI 507
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK-- 451
+ + G E V++A +++ I V YN+ + L G ++A + M+K+
Sbjct: 508 VNGLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQKQDG 563
Query: 452 KIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK---QGQI 508
+ VT+ I+I+ CK Y +A ++ M+ + Y +++ ++SK Q ++
Sbjct: 564 EKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKV 623
Query: 509 VEAESTFNLMKSSGCSPDVVTYTSML 534
VE L G +P Y S++
Sbjct: 624 VELHDYLIL---QGVTPHEHIYLSIV 646
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 195/444 (43%), Gaps = 7/444 (1%)
Query: 101 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 160
C + +++L+ A + G + A +++ S NN + +
Sbjct: 144 CGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFW 203
Query: 161 NVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
V K+M G ++ T N+++ +F S+ +ALS F M + P+ + N++I
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 221 VKLRQYDKAIDIFNSMREKKSE-CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
K A+ + M P+ V+Y S+I+ + +G+++ E M+ G+
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
+ +Y ALV AY G EAL + +E+ G + V Y S++ + A V
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
+ ++ + + ++ NG + +A++ R++ + + ++V TL+ R
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
+ + +L + ++G+ L+ +++ + I YL G+ ++AL +Y M K ++ V
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
Y +++G K G A + + M +K V+ Y+++L K G + EA+ + M+
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNA-MEIKDIVT---YNTLLNESLKTGNVEEADDILSKMQ 559
Query: 520 SSGCSPDV--VTYTSMLDAYTAAG 541
V VT+ M++ G
Sbjct: 560 KQDGEKSVSLVTFNIMINHLCKFG 583
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 141/298 (47%), Gaps = 4/298 (1%)
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+I+ + M + G ++ ++N ++ ++ EAL VF + + G P++VS+
Sbjct: 198 EIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFN 257
Query: 322 SLLNA---YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+++ G + + G M+ N + PN V+YN++I+ + G LD A +I +M
Sbjct: 258 MMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDM 317
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
+ G+ N + L+ A GR + + +G+ +NTV YNS + G+
Sbjct: 318 VKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDI 377
Query: 439 DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSI 498
+ A+ + + M K ++ D T I++ G C+ EA+ F ++ KL ++++
Sbjct: 378 EGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL 437
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYEDGFWK 556
+ + + ++ A+ M G S D +++ +++D Y GK+ L+ DG K
Sbjct: 438 MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLE-RALEIYDGMIK 494
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 176/375 (46%), Gaps = 13/375 (3%)
Query: 65 NYCARNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
N+ + N + YN +I + R+D A + +M + + TY AL++A+GRAG
Sbjct: 285 NFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDE 344
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
A+ + D+M + + YN+++ G+ + A++V + M + D T I++
Sbjct: 345 ALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVR 404
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
+A+ + + + D N ++H V+ ++ A I SM +
Sbjct: 405 GLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSL 464
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
D +S+ ++I Y G++E ++ M+ ++V YN++V + GM A
Sbjct: 465 --DAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEA 522
Query: 304 VFN--EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKP-NLVSYNALI 359
V N EIK DIV+Y +LLN ++ ++A + +M K++ K +LV++N +I
Sbjct: 523 VVNAMEIK------DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
+ G + A ++L+ M + G+ P+ ++ TL+ + + + K+ + ++G+
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 420 LNTVAYNSAIGSYLN 434
+ Y S + L+
Sbjct: 637 PHEHIYLSIVRPLLD 651
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 116/532 (21%), Positives = 234/532 (43%), Gaps = 61/532 (11%)
Query: 51 EHCNL--VFQWMKNQRNYCARNDIY--NMMIRLHARHNRIDQARGLFFEMQEWR-CKPDA 105
+HC+ VF+ N+ R+D+Y N ++ +++++ +F + C PD+
Sbjct: 54 DHCSARHVFE------NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDS 107
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 165
T+ +I A+G G+ I ++++ ++L+ ++ +L V +
Sbjct: 108 FTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE 167
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQ 225
M + D+ + N ++S F + KAL F M+ + P++ +L + I +L
Sbjct: 168 MPER----DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 223
Query: 226 YDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY 285
++ +I +K E V S +++ +Y +E F M + S+V++
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNS--ALVDMYGKCDCLEVAREVFQKM----PRKSLVAW 277
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
N+++ Y A G K + + N + G RP + TS+L A RS+ + + + R
Sbjct: 278 NSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 346 NKLKPNLV-------------------------------SYNALIDAYGSNGLLDDAIKI 374
+ + ++ S+N +I +Y S G A+++
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 375 LREMEQDGIQPNVVSICTLLAACGRCS--QKGKIETVLSAAQMRGIKLNTVAYNSAIGSY 432
+M G++P+VV+ ++L AC + + +KGK + LS ++ R ++ + + ++ + Y
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK-QIHLSISESR-LETDELLLSALLDMY 455
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G +A ++ S+ KK D V++T++IS + EAL +EM L
Sbjct: 456 SKCGNEKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG 511
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKM 543
++L A G I E F+ M+S G P + Y+ M+D AG++
Sbjct: 512 VTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 14/238 (5%)
Query: 110 ALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN 169
+LI+ + + G+ N+ + + ++N +I++ S GNW +A+ V +M
Sbjct: 349 SLIDLYFKCGE----ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV 404
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
GV PD+VT +L A + K + + + D L+ ++ K +A
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
IFNS+ +K DVVS+T +I Y GQ F+ M G+KP V+ A++
Sbjct: 465 FRIFNSIPKK------DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 290 GAYAAHGMGKEALLVFNEIKQN-GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
A G+ E L F++++ G P I Y+ +++ GR+ + +A +E+I++
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA---YEIIQQT 573
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 160/373 (42%), Gaps = 24/373 (6%)
Query: 181 LLSAFKSGSQYSKALSYFELMK----GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
LLS + + +K+L +L+ +R D +I+ + + A +F +
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI-KPSIVSYNALVGAYAAH 295
+ DV + S++ YS + + F +L I P ++ ++ AY A
Sbjct: 66 -----DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGA- 119
Query: 296 GMGKEAL--LVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNL 352
+G+E L ++ + ++G+ D+V +SL+ Y + + + VF EM +R+ +
Sbjct: 120 -LGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERD-----V 173
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSA 412
S+N +I + +G + A+++ ME G +PN VS+ ++AC R + + +
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 413 AQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
+G +L+ ++ + Y + A +++ M +K + V + +I G
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL----VAWNSMIKGYVAKGD 289
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
+ + M+ S+ +SIL A S+ ++ + + S + D+ S
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCS 349
Query: 533 MLDAYTAAGKMNF 545
++D Y G+ N
Sbjct: 350 LIDLYFKCGEANL 362
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 171/355 (48%), Gaps = 9/355 (2%)
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
N++L F ++ + FE M+ H + +T + I V + KA++I+ S+ +
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQ-QHGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPD 159
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV-GAYAAHGM 297
+ ++ +V SI+ +G++++C F+ M +G+KP +V+YN L+ G
Sbjct: 160 ESTKI--NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG 217
Query: 298 GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNA 357
+A+ + E+ NG + D V Y ++L + + ++A + +K PN+ Y++
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 358 LIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG 417
L+++Y G A +++ EM+ G+ PN V + TLL + + +LS + G
Sbjct: 278 LLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG 337
Query: 418 IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA- 476
N + Y + G+ ++A ++ M+ K +++D +I+IS C+ ++ EA
Sbjct: 338 YAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAK 397
Query: 477 -LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
LS E + K + + +++LCAY + G++ M SPD T+
Sbjct: 398 ELSRDSETTYEKCDLV--MLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTF 450
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 199/439 (45%), Gaps = 5/439 (1%)
Query: 84 NRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTY 143
+ + ++ +Q + N ++ G +G+W+ + + + M + S STY
Sbjct: 77 SEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTY 135
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
++ I G+ N +AL + + + D ++ N +LS + + F+ MK
Sbjct: 136 SSCIKFVGAK-NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKR 194
Query: 204 THIRPDTTTLNIVIHCLVKLRQ-YDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
++PD T N ++ +K++ Y KAI++ + + D V Y +++ + + +G+
Sbjct: 195 DGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQM--DSVMYGTVLAICASNGR 252
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
E E M EG P+I Y++L+ +Y+ G K+A + E+K G P+ V T+
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT 312
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
LL Y + ++R + ++ N + Y L+D G L++A I +M+ G
Sbjct: 313 LLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
++ + + +++A R + + + + ++ K + V N+ + +Y GE + +
Sbjct: 373 VRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVM 432
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAY 502
+ K M ++ + D T+ ILI K + A +M + +E+ SS++
Sbjct: 433 RMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHL 492
Query: 503 SKQGQIVEAESTFNLMKSS 521
K EA S +N+++ S
Sbjct: 493 GKIRAQAEAFSVYNMLRYS 511
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 5/286 (1%)
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
I+ + +SG+ ++ F M G K S+ +Y++ + A + K AL ++ I
Sbjct: 104 ILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVGAKNVSK-ALEIYQSIPDES 161
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA--YGSNGLLDD 370
+ ++ S+L+ ++ K +F+ +KR+ LKP++V+YN L+ NG
Sbjct: 162 TKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGY-PK 220
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
AI+++ E+ +GIQ + V T+LA C + + E + ++ G N Y+S +
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLN 280
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
SY G+Y KA L M+ + + V T L+ K + + + E+
Sbjct: 281 SYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAE 340
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
++ Y ++ SK G++ EA S F+ MK G D + M+ A
Sbjct: 341 NEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISA 386
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
N ++ + G ++ + +F ++Q+G + + +Y+S + G ++ KA +++ I
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVG-AKNVSKALEIYQSIPD 159
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK-G 404
K N+ N+++ NG LD IK+ +M++DG++P+VV+ TLLA C +
Sbjct: 160 ESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYP 219
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
K ++ GI++++V Y + + + G ++A + M+ + + Y+ L+
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
+ Y +A M EM + L +K + +++L Y K G + + ++S+G +
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYA 339
Query: 525 PDVVTYTSMLDAYTAAGKM 543
+ + Y ++D + AGK+
Sbjct: 340 ENEMPYCMLMDGLSKAGKL 358
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/363 (18%), Positives = 164/363 (45%), Gaps = 6/363 (1%)
Query: 25 LNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHN 84
L R ++ ++++ G + +F+WM+ Y+ I+ N
Sbjct: 89 LQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHGKISVST--YSSCIKFVGAKN 146
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
+ +A ++ + + K + N++++ + G+ + + D M R + P TYN
Sbjct: 147 -VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYN 205
Query: 145 NLINACGSSGN-WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
L+ C N + +A+ + ++ NG+ D V + +L+ S + +A ++ + MK
Sbjct: 206 TLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV 265
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI 263
P+ + +++ Y KA ++ M K P+ V T+++ +Y G
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEM--KSIGLVPNKVMMTTLLKVYIKGGLF 323
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
+ + + + G + + Y L+ + G +EA +F+++K G R D + + +
Sbjct: 324 DRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIM 383
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
++A RS++ ++A+ + + K +LV N ++ AY G ++ ++++++M++ +
Sbjct: 384 ISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAV 443
Query: 384 QPN 386
P+
Sbjct: 444 SPD 446
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 2/198 (1%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
+++++ + D++R L E++ + Y L++ +AG+ A +I DDM
Sbjct: 313 LLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
+ + +I+A S +KEA + + DLV N +L A+ + +
Sbjct: 373 VRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVM 432
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
+ M + PD T +I+I +K + + A M K ++ S + I H
Sbjct: 433 RMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCS-SLIYH 491
Query: 256 LYSVSGQIENCEAAFNMM 273
L + Q E + +NM+
Sbjct: 492 LGKIRAQAE-AFSVYNML 508
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/556 (21%), Positives = 230/556 (41%), Gaps = 47/556 (8%)
Query: 5 VSEVAEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQR 64
V E+A + + DD+D +L G + F +IK + ++ V W+K ++
Sbjct: 118 VRELAFSLRAAKTADDVDAVLKD-KGELPLQVFCAMIKGFGKDKRLKPAVAVVDWLKRKK 176
Query: 65 NYCARNDIYNMMI--RLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
+ N+ I L +A + +M+E P+ TYN L+ + G++
Sbjct: 177 SESGGVIGPNLFIYNSLLGAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFL 236
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV--------CKKMTDNGVGPD 174
A+ I+D P+ TY+ + + AL K+ N VG D
Sbjct: 237 KALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYD 296
Query: 175 LVTHNILLSAF--------------KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
+ L F K + ++ L M +RP +I
Sbjct: 297 WEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWAC 356
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM---MLAEG 277
+ Y +++ +RE+ SE +S + HL + G+ + AA + +L EG
Sbjct: 357 TREEHYIVGKELYKRIRERFSE-----ISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEG 411
Query: 278 IKPSIVSY-------NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
+P+ +SY N L+ A + G+ + + + N+++ G +P + ++L A ++
Sbjct: 412 PEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKA 471
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
+ A +F+ + N KP ++SY AL+ A L D+A ++ M + GI+PN+ +
Sbjct: 472 SETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAY 531
Query: 391 CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
T+ + + ++T+L +GI+ + V +N+ I G A + M+
Sbjct: 532 TTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKS 591
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
+ ++ + +TY +LI +K A + + L +S + Y +++ + G ++
Sbjct: 592 ENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYGATID 651
Query: 511 AESTFNLMKSSGCSPD 526
NL+ G PD
Sbjct: 652 ----LNLL---GPRPD 660
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 199/468 (42%), Gaps = 44/468 (9%)
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLR------AAIPPSRSTYNNLINACGSSGNWKEA 159
+ + A+I G+ + + A+ ++D + R I P+ YN+L+ A G EA
Sbjct: 147 QVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG---EA 203
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ K M + G+ P++VT+N L+ + ++ KAL +L K P+ T + +
Sbjct: 204 EKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLV 263
Query: 220 LVKLRQYDKAIDIFNSMREK--KSECHPDVVSYT---SIIHLYSVSGQI----------- 263
++ A++ F +REK K E DV Y + L + G+I
Sbjct: 264 YRRMEDGMGALEFFVELREKYAKREIGNDV-GYDWEFEFVKLENFIGRICYQVMRRWLVK 322
Query: 264 -----ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG---MGKEALLVFNEIKQNGFRP 315
N M + G++PS + L+ A +GKE ++ I++
Sbjct: 323 DDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKE---LYKRIRERFSEI 379
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY-------NALIDAYGSNGLL 368
+ L+ G+++K A ++E + +PN +SY N L+ A G+
Sbjct: 380 SLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIW 439
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+++L +ME G++P +L AC + S+ + A G K ++Y +
Sbjct: 440 RWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGAL 499
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
+ + YD+A ++ M K I+ + YT + S K+ + ++EM +
Sbjct: 500 LSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
S +++++ ++ G A F+ MKS P+ +TY +++A
Sbjct: 560 EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEA 607
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/536 (20%), Positives = 221/536 (41%), Gaps = 34/536 (6%)
Query: 18 YDDIDGLLNRWVGRFAR--KNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNM 75
Y +I +L R+ +R F ++ +L +R ++ + L+ + + + +
Sbjct: 79 YPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCE 138
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
+I L ++ +D R L E C D ++ L+ + + G + ++L +
Sbjct: 139 LIELTSKKEEVDVFRVLVSATDE--CNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSG 196
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
S T N+L+N ++ V M G+ P+ T NIL + F + S + +
Sbjct: 197 FSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVD 256
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
+ E M+ PD T N ++ + + +A ++ M ++ PD+V+YTS+I
Sbjct: 257 DFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVV--PDLVTYTSLIK 314
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
G++ F+ M+ GIKP +SYN L+ AY GM +++ + +E+ N P
Sbjct: 315 GLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP 374
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
D + ++ + R + A ++R K+ + LI + G A +L
Sbjct: 375 DRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLL 434
Query: 376 -REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLN 434
R +E++G + + L+ + RC + + + + L+ Y + IG
Sbjct: 435 DRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCR 494
Query: 435 VGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV 494
+G +A L M ++K DS L+ G CK + +A
Sbjct: 495 IGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA------------------ 536
Query: 495 YSSILCAYSKQGQIVEAESTFNLMKS---SGCSPDVVTYTSMLDAYTAAGKMNFEP 547
+L ++ + +I + ES +L+K+ +GC Y L+ ++ F P
Sbjct: 537 -ERLLSLFAMEFRIFDPESYNSLVKAVCETGCG-----YKKALELQERMQRLGFVP 586
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 161/362 (44%), Gaps = 51/362 (14%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N +IR ++R+N A ++ MQ R PD+ T+ L+ A + + +
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 133 RAAIPPSRSTYNNLI------NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFK 186
R N LI GS+ E L + ++ +V+ ++SA+
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT--------IVSWTAIVSAYA 198
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+ +AL F M+ ++PD L V++ L+ + I S+ + E PD
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
++ S+ +Y+ GQ+ + F+ M + P+++ +NA++ YA +G +EA+ +F+
Sbjct: 259 LL--ISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK------------------- 347
E+ RPD +S TS ++A + ++AR ++E + R+
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 348 ------------LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
L ++V ++A+I YG +G +AI + R ME+ G+ PN V+ LL
Sbjct: 373 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 432
Query: 396 AC 397
AC
Sbjct: 433 AC 434
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 138/308 (44%), Gaps = 8/308 (2%)
Query: 245 PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV 304
P + + +II YS + ++ ++ M + P ++ L+ A + + V
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGS 364
++ + GF D+ L+ Y + ++ AR VFE + + +VS+ A++ AY
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE--RTIVSWTAIVSAYAQ 199
Query: 365 NGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR-GIKLNTV 423
NG +A++I +M + ++P+ V++ ++L A C Q K + A+ ++ G+++
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF-TCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
S Y G+ A L+ M+ + + + +ISG K EA+ EM
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNL----ILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
++ + +S + A ++ G + +A S + + S DV ++++D + G +
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 544 NFEPLKYE 551
L ++
Sbjct: 375 EGARLVFD 382
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 145/308 (47%), Gaps = 26/308 (8%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAA---IPPSRSTYNNLINACGSSGNWKEA 159
PD+ Y L+ + + G+ +++ M R P TY +++A ++G A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTTTLNIVIH 218
V +M GV + +T+N+LL + Q +A E+ + I PD + NI+I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG- 277
+ + A+ FN MR + P +SYT+++ +++SGQ + F+ M+ +
Sbjct: 532 GCILIDDSAGALAFFNEMRTRG--IAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+K ++++N LV Y G+ ++A V + +K+NGF P++ +Y SL N +++KP A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 338 GVFEMIKRN-------------------KLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+++ IK LKP+ + L D A++I+ M
Sbjct: 650 LLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACM 709
Query: 379 EQDGIQPN 386
E++GI PN
Sbjct: 710 EENGIPPN 717
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 7/238 (2%)
Query: 172 GPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR---PDTTTLNIVIHCLVKLRQYDK 228
PD + L+ + + + E M+ R PD T V+ V D+
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE-GIKPSIVSYNA 287
A + M + + ++Y ++ Y QI+ E M + GI+P +VSYN
Sbjct: 471 ARQVLAEM--ARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNI 528
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRN 346
++ AL FNE++ G P +SYT+L+ A+ S +P+ A VF EM+
Sbjct: 529 IIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP 588
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
++K +L+++N L++ Y GL++DA +++ M+++G PNV + +L + + G
Sbjct: 589 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPG 646
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 185/433 (42%), Gaps = 50/433 (11%)
Query: 138 PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSY 197
P + +N ++NAC + G+ + + ++M++ PD++T+N+++ + +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS-------ECHPDVVSY 250
E + I+ TT++ ++ V A I +MREK+ EC+ + +
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 251 TSIIHL--------------YSVSGQI--ENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
YS ++ E F +L + PS
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPS------------- 400
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK---PN 351
G+ LL F PD YT+L+ Y ++ + + E ++R + P+
Sbjct: 401 ---GEPPLL------PKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPD 451
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL- 410
V+Y ++ A+ + GL+D A ++L EM + G+ N ++ LL + Q + E +L
Sbjct: 452 EVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLR 511
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+ GI+ + V+YN I + + + AL + MR + I ++YT L+
Sbjct: 512 EMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMS 571
Query: 471 SKYGEALSFMEEMMH-LKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
+ A +EMM+ ++ V ++ ++ Y + G I +A+ + MK +G P+V T
Sbjct: 572 GQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVAT 631
Query: 530 YTSMLDAYTAAGK 542
Y S+ + + A K
Sbjct: 632 YGSLANGVSQARK 644
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 190/468 (40%), Gaps = 75/468 (16%)
Query: 104 DAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 163
DA + L A ++GQ +A++++ M+R+ P + + + +SG+
Sbjct: 152 DANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGD-------- 203
Query: 164 KKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
GP+ +I L F + ++ K L+ + RPDT N V++ L
Sbjct: 204 -------DGPE---ESIKL--FIAITRRVKRFGDQSLVGQS--RPDTAAFNAVLNACANL 249
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIV 283
DK +F M E +C PDV++Y +I L + G+ E ++ +GIK +
Sbjct: 250 GDTDKYWKLFEEMSE--WDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMT 307
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY---------------- 327
+ ++LV AY G + A + +++ R D+ NA
Sbjct: 308 TMHSLVAAYVGFGDLRTAERIVQAMREK--RRDLCKVLRECNAEDLKEKEEEEAEDDEDA 365
Query: 328 -------GRSQKPQKAR-GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
G S + + + GV ++ K KL PN V D G LL
Sbjct: 366 FEDDEDSGYSARDEVSEEGVVDVFK--KLLPNSV------DPSGEPPLLPKVF------- 410
Query: 380 QDGIQPNVVSICTLLAAC---GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
P+ TL+ GR + ++ + R + V Y + + +++N G
Sbjct: 411 ----APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAG 466
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV-- 494
D+A + M + + A+ +TY +L+ G CK + A + EM + +V
Sbjct: 467 LMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE-DAGIEPDVVS 525
Query: 495 YSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
Y+ I+ A + FN M++ G +P ++YT+++ A+ +G+
Sbjct: 526 YNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQ 573
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 11/247 (4%)
Query: 245 PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK---PSIVSYNALVGAYAAHGMGKEA 301
PD YT+++ Y +G++ + M + + P V+Y +V A+ G+ A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALID 360
V E+ + G + ++Y LL Y + + +A + EM + ++P++VSYN +ID
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 361 AYGSNGLLDD---AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG 417
L+DD A+ EM GI P +S TL+ A Q V
Sbjct: 532 GCI---LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP 588
Query: 418 -IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
+K++ +A+N + Y +G + A + M++ + TY L +G + K G+A
Sbjct: 589 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA 648
Query: 477 LSFMEEM 483
L +E+
Sbjct: 649 LLLWKEI 655
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 128/251 (50%), Gaps = 5/251 (1%)
Query: 137 PPSRSTYNNLINA-CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
P ++N ++N C G+ +EA V +M + GV D+V+++ ++S + G +K L
Sbjct: 263 PFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVL 322
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
F+ MK I PD N V+H L K +A ++ +M E+K P+VV+Y S+I
Sbjct: 323 KLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKG-IEPNVVTYNSLIK 381
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
+ + E + F+ ML +G+ P+I +Y+A + G+E + ++++ G P
Sbjct: 382 PLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRT---GEEVFELLAKMRKMGCEP 438
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
+ +Y L+ R + +++ +K + P+L SY +I NG +++A
Sbjct: 439 TVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYY 498
Query: 376 REMEQDGIQPN 386
+EM+ G++PN
Sbjct: 499 KEMKDKGMRPN 509
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 115/226 (50%), Gaps = 9/226 (3%)
Query: 59 WMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
WM+ N ++D+ Y+ MI +++ +++ LF M++ +PD + YNA+++A
Sbjct: 290 WME-MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALA 348
Query: 117 RAGQWRWAMNIMDDMLRA-AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
+A A N+M M I P+ TYN+LI + +EA V +M + G+ P +
Sbjct: 349 KASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTI 408
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS 235
T++ + ++G + + L+ M+ P T ++I L + R +D + +++
Sbjct: 409 RTYHAFMRILRTGEEVFELLAK---MRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDE 465
Query: 236 MREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
M+EK PD+ SY +IH ++G+IE + M +G++P+
Sbjct: 466 MKEKT--VGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 142/322 (44%), Gaps = 12/322 (3%)
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
++ TL I+I + KAI+ F++ + K E D L S + +N
Sbjct: 196 NSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGID-----DFQSLLSALCRYKNVSD 250
Query: 269 AFNMMLAEGIKPSI--VSYNALVGAYA-AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
A +++ K S+N ++ + G +EA V+ E+ G + D+VSY+S+++
Sbjct: 251 AGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMIS 310
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD-GIQ 384
Y + K +F+ +K+ ++P+ YNA++ A + +A +++ ME++ GI+
Sbjct: 311 CYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIE 370
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
PNVV+ +L+ + + + + V +G+ T+ A L GE + L
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL-FPTIRTYHAFMRILRTGE--EVFEL 427
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
MRK + TY +LI C+ + L +EM + Y ++
Sbjct: 428 LAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Query: 505 QGQIVEAESTFNLMKSSGCSPD 526
G+I EA + MK G P+
Sbjct: 488 NGKIEEAYGYYKEMKDKGMRPN 509
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 21/298 (7%)
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMM-LAEGIKPSIVSYNAL---VGAY-AAHGMGKEA 301
V Y S+I S+ G++ + A+ ++ PS+V+ L + Y A H +GK A
Sbjct: 161 VREYHSMI---SILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGK-A 216
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
+ F+ K+ I + SLL+A R + A G ++K + S+N +++
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA-GHLIFCNKDKYPFDAKSFNIVLNG 275
Query: 362 YGSN-GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
+ + G +A ++ EM G++ +VVS ++++ + K+ + + I+
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK-IKADSVTYTILISGSCKMSKYGEALSF 479
+ YN+ + + +A L K+M ++K I+ + VTY LI CK K EA
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNL---MKSSGCSPDVVTYTSML 534
+EM+ K ++ +I ++ + E F L M+ GC P V TY ++
Sbjct: 396 FDEMLE------KGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLI 447
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 18/280 (6%)
Query: 267 EAAFNMML----AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
E AF + +G S+ Y++++ A + +E+++ F P +V+ +
Sbjct: 142 ETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQT 199
Query: 323 LL---NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL---- 375
LL Y KA F KR KL+ + + +L+ A + DA ++
Sbjct: 200 LLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNK 259
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
+ D N+V L C + E V G+K + V+Y+S I Y
Sbjct: 260 DKYPFDAKSFNIV----LNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKG 315
Query: 436 GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLK-LPVSKEV 494
G +K L L+ M+K+ I+ D Y ++ K S EA + M+ M K + +
Sbjct: 316 GSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVT 375
Query: 495 YSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
Y+S++ K + EA+ F+ M G P + TY + +
Sbjct: 376 YNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM 415
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 48 GSIEHCNLVFQWMKNQRNYCARND--IYNMMIRLHARHNRIDQARGLFFEMQEWR-CKPD 104
GS+ +F MK + C D +YN ++ A+ + + +AR L M+E + +P+
Sbjct: 316 GSLNKVLKLFDRMKKE---CIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPN 372
Query: 105 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN---------------- 148
TYN+LI +A + A + D+ML + P+ TY+ +
Sbjct: 373 VVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMR 432
Query: 149 --ACGSS-----------GNWKEALNVC---KKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
C + W++ NV +M + VGPDL ++ +++ +
Sbjct: 433 KMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIE 492
Query: 193 KALSYFELMKGTHIRPDTTTLNIV 216
+A Y++ MK +RP+ +++
Sbjct: 493 EAYGYYKEMKDKGMRPNENVEDMI 516
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 14/242 (5%)
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL---IDAYGSN 365
KQ G+ + Y S+++ G+ +K A + + ++ K P+LV+ L I Y +
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAV 210
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
+ AI ++ ++ + +LL+A R ++ + + + ++
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDK-YPFDAKSF 269
Query: 426 NSAIGSYLNV-GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
N + + NV G +A ++ M +K D V+Y+ +IS K + L + M
Sbjct: 270 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK 329
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS----SGCSPDVVTYTSMLDAYTAA 540
+ ++VY++++ A +K + EA NLMK+ G P+VVTY S++ A
Sbjct: 330 KECIEPDRKVYNAVVHALAKASFVSEAR---NLMKTMEEEKGIEPNVVTYNSLIKPLCKA 386
Query: 541 GK 542
K
Sbjct: 387 RK 388
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 176/396 (44%), Gaps = 46/396 (11%)
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA-AIPPSRSTYNNLI 147
AR +F EM E PD + A+++A + + A+ + M R + P ST+ ++
Sbjct: 217 ARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVL 272
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
ACG+ K+ + K+ NG+G ++V + LL + +A F M +
Sbjct: 273 TACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS----K 328
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK---------------------------- 239
++ + + ++ + +++KAI+IF M EK
Sbjct: 329 KNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQY 388
Query: 240 -KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
+ C +V+ +++I LY SG I++ ++ M +++++NA++ A A +G G
Sbjct: 389 VRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRG 444
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE-MIKRNKLKPNLVSYNA 357
+EA+ FN++ + G +PD +S+ ++L A G + + R F M K +KP Y+
Sbjct: 445 EEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSC 504
Query: 358 LIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG 417
+ID G GL ++A +L E + + LL C + ++ ++ M
Sbjct: 505 MIDLLGRAGLFEEAENLLERAE---CRNDASLWGVLLGPCAANADASRVAERIAKRMMEL 561
Query: 418 IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
++Y Y +G + AL + K M ++ +
Sbjct: 562 EPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 208/466 (44%), Gaps = 61/466 (13%)
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
+ GQ A+ I++ + IP + Y +L+ C ++ + + +G+ D
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 177 THNILLSA-FKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS 235
N LLS FK G + F+ G ++ D + ++ V +++ KA+++F
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFD---GRFVK-DAISWTSMMSGYVTGKEHVKALEVFVE 153
Query: 236 MREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY----NALVGA 291
M VS+ + +++S ++ C + L ++++ N + +
Sbjct: 154 M-----------VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISS 202
Query: 292 YAAH--GMGKE---ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN 346
A+ G+ +E A VF+E+ + PD++ +T++L+A+ ++ ++A G+F + R
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 347 K-LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
K L P+ ++ ++ A G+ L +I ++ +GI NVV +LL G+C +
Sbjct: 259 KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVRE 318
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT------ 459
V + K N+V++++ +G Y GE++KA+ +++ M +K +
Sbjct: 319 ARQVFNGMS----KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAG 374
Query: 460 -------------------YTILISGSCKMSKYGEALSF-MEEMMHLKLPVSKEV-YSSI 498
+ +I S + YG++ ++ K+ + + ++++
Sbjct: 375 LAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAM 434
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
L A ++ G+ EA S FN M G PD +++ ++L A G ++
Sbjct: 435 LSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 170/362 (46%), Gaps = 2/362 (0%)
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+EAL++ + + G D +++ L+ + L++ ++R + +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
I K DKAID+F+ + +C + S ++I++ +G++E ++ F+
Sbjct: 123 IQHYGKAGSVDKAIDVFHKI--TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
++P+ VS+N L+ + + A VF+E+ + +P +V+Y SL+ R+ KA
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
+ + E + + +++PN V++ L+ G ++A K++ +ME G +P +V+ L++
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
G+ + + + +L + R IK + V YN + +A + M+ K K +
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
+ TY ++I G C++ + L+ + M+ + + + ++ K G + A
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Query: 517 LM 518
+M
Sbjct: 421 VM 422
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 151/348 (43%), Gaps = 6/348 (1%)
Query: 34 RKNFPF---LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQAR 90
R ++P LI +L + + + + + + ++ RN R ++ +I+ + + +D+A
Sbjct: 78 RHDYPSYSSLIYKLAKSRNFDAVDQILRLVR-YRNVRCRESLFMGLIQHYGKAGSVDKAI 136
Query: 91 GLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINAC 150
+F ++ + C ++ N LIN G+ A + D + P+ ++N LI
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGF 196
Query: 151 GSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDT 210
+W+ A V +M + V P +VT+N L+ KA S E M IRP+
Sbjct: 197 LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNA 256
Query: 211 TTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAF 270
T +++ L +Y++A + M + C P +V+Y ++ G+I+ +
Sbjct: 257 VTFGLLMKGLCCKGEYNEAKKLMFDMEYRG--CKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 271 NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
M IKP +V YN LV EA V E++ G +P+ +Y +++ + R
Sbjct: 315 GEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+ V + ++ P ++ ++ G LD A +L M
Sbjct: 375 EDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 154/364 (42%), Gaps = 2/364 (0%)
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
L+ K +ALS F + R D + + +I+ L K R +D I +R +
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
C + + +I Y +G ++ F+ + + +I S N L+ +G ++
Sbjct: 112 VRCRESL--FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEK 169
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALID 360
A F+ K RP+ VS+ L+ + + A VF+ + +++P++V+YN+LI
Sbjct: 170 AKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG 229
Query: 361 AYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
N + A +L +M + I+PN V+ L+ + + + ++ + RG K
Sbjct: 230 FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKP 289
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM 480
V Y + G D+A L M+K++IK D V Y IL++ C + EA +
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVL 349
Query: 481 EEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
EM + Y ++ + + + N M +S P T+ M+
Sbjct: 350 TEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKG 409
Query: 541 GKMN 544
G ++
Sbjct: 410 GNLD 413
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%)
Query: 87 DQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNL 146
++A+ L F+M+ CKP Y L++ G+ G+ A ++ +M + I P YN L
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNIL 332
Query: 147 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
+N + EA V +M G P+ T+ +++ F + L+ M +
Sbjct: 333 VNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRH 392
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
P T ++ L+K D A + M +K
Sbjct: 393 CPTPATFVCMVAGLIKGGNLDHACFVLEVMGKK 425
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/555 (20%), Positives = 224/555 (40%), Gaps = 85/555 (15%)
Query: 69 RNDIYNMMIRLHARHN--RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMN 126
R D N+ +H+ + R D+A F PD T N +I + +
Sbjct: 87 RPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLG 146
Query: 127 IMDDML--RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA 184
++ ++ + PS + YN L+N + +A + M + G PD+VT L+
Sbjct: 147 VIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGG 206
Query: 185 FKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE---KKS 241
+ + A F+ M+ IRP++ TL+++I +K+R + + + E ++
Sbjct: 207 YCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNET 266
Query: 242 ECHPDVVSYTSIIH----------LYSVSGQIENCEA-----AFNMML------------ 274
+ ++ +++ ++ ++ + CE+ A+ M+
Sbjct: 267 DTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGA 326
Query: 275 --------AEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
++G+KP SYNA++ G A + E + F P +Y L+ +
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMES 386
Query: 327 YGRSQKPQKARGVFEMIKRNK-----------------------------------LKPN 351
+ KAR V E++ R + +P+
Sbjct: 387 LCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPD 446
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGI-QPNVVSICTLLAACGRCSQKGKIETVL 410
+ N +I+ G +DDA+K+L +M P+ V++ T++ CG +Q G+ E L
Sbjct: 447 EYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM--CGLLAQ-GRAEEAL 503
Query: 411 SAAQM----RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
IK VAYN+ I + + D+A+ ++ + K + ADS TY I+I G
Sbjct: 504 DVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDG 563
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
C +K A F ++++ VY++ L + G + +A + SG P+
Sbjct: 564 LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPN 623
Query: 527 VVTYTSMLDAYTAAG 541
VV Y +++ + +G
Sbjct: 624 VVCYNTVIAECSRSG 638
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 172/394 (43%), Gaps = 11/394 (2%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI---YNMMIRLHARHNRIDQARGLF 93
F L+ + + G + N +F+ +N + C ++ Y MI R+ R A +
Sbjct: 275 FANLVDSMCREG---YFNDIFEIAENM-SLCESVNVEFAYGHMIDSLCRYRRNHGAARIV 330
Query: 94 FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 153
+ M+ KP +YNA+I+ + G A ++++ PS TY L+ +
Sbjct: 331 YIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKE 390
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
+ +A NV + M +NI L ++ L+ M RPD TL
Sbjct: 391 LDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTL 450
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N VI+ L K+ + D A+ + + M K C PD V+ +++ G+ E N +
Sbjct: 451 NTVINGLCKMGRVDDAMKVLDDMMTGKF-CAPDAVTLNTVMCGLLAQGRAEEALDVLNRV 509
Query: 274 LAEG-IKPSIVSYNALV-GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQ 331
+ E IKP +V+YNA++ G + H G EA+ VF ++++ D +Y +++ +
Sbjct: 510 MPENKIKPGVVAYNAVIRGLFKLHK-GDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTN 568
Query: 332 KPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC 391
K A+ ++ + + + Y A + +G L DA L ++ G PNVV
Sbjct: 569 KVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYN 628
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
T++A C R K + +L + G + V +
Sbjct: 629 TVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 4/257 (1%)
Query: 69 RNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIM 128
R IYN+ +R + + + M + C+PD T N +IN + G+ AM ++
Sbjct: 411 RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVL 470
Query: 129 DDMLRAAI-PPSRSTYNNLINACGSSGNWKEALNVCKK-MTDNGVGPDLVTHNILLSAFK 186
DDM+ P T N ++ + G +EAL+V + M +N + P +V +N ++
Sbjct: 471 DDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLF 530
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
+ +A+S F ++ + D+TT I+I L + D A ++ + D
Sbjct: 531 KLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSG--RHD 588
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
Y + + SG + + + G P++V YN ++ + G+ +EA +
Sbjct: 589 AFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILE 648
Query: 307 EIKQNGFRPDIVSYTSL 323
E+++NG PD V++ L
Sbjct: 649 EMRKNGQAPDAVTWRIL 665
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/404 (19%), Positives = 167/404 (41%), Gaps = 13/404 (3%)
Query: 150 CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPD 209
C N EAL + + G PD + + ++ + ++ +A F L + PD
Sbjct: 65 CAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPD 124
Query: 210 TTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII-HLYSVSGQIENCEA 268
T N++I L+ R + + + + K E P + +Y ++ L ++ I+ +
Sbjct: 125 ERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKL 184
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
F+M G P +V++ L+G Y + A VF+E++ G RP+ ++ + L+ +
Sbjct: 185 VFDMR-NRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFL 243
Query: 329 RSQKPQKARGVFEMI---KRNKLKPNL--VSYNALIDAYGSNGLLDDAIKILREM---EQ 380
+ + + R + + + +N+ ++ ++ L+D+ G +D +I M E
Sbjct: 244 KMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCES 303
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
++ + L R +I ++ + +G+K +YN+ I G +
Sbjct: 304 VNVEFAYGHMIDSLCRYRRNHGAARIVYIMKS---KGLKPRRTSYNAIIHGLCKDGGCMR 360
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A L + + + TY +L+ CK G+A + +E M+ + +Y+ L
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
E + M C PD T ++++ G+++
Sbjct: 421 GLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVD 464
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 161/359 (44%), Gaps = 10/359 (2%)
Query: 31 RFARKNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQAR 90
R++ + +I +L + + V +K I+ +I R +A
Sbjct: 44 RYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRAL 103
Query: 91 GLFFEMQEWRCKPDAETYNALINAHGRAGQW---RWAMNIMDDMLRAAIPPSRSTYNNLI 147
+F EM ++RC+ ++ N+L++A + G+ + ++ +D+ + P TYN LI
Sbjct: 104 HMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGK----PDACTYNILI 159
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSY-FELMKGTHI 206
+ C SG + +AL + +M V P VT L+ S+ +AL +++K +
Sbjct: 160 HGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGV 219
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
RP +I L ++ + A + + E K + D Y+++I +G+
Sbjct: 220 RPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV--DAAIYSTLISSLIKAGRSNEV 277
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNA 326
M +G KP V+YN L+ + + A V +E+ + G +PD++SY +L
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 327 YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
+ R +K ++A +FE + R P+ +SY + D ++A IL EM G +P
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 133/279 (47%), Gaps = 38/279 (13%)
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI-EN 265
+PD T NI+IH + +D A+ +F+ M +KK + P V++ ++IH ++ E
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVK--PTGVTFGTLIHGLCKDSRVKEA 206
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
+ +M+ G++P++ Y +L+ A G A + +E + + D Y++L++
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
+ ++ + + + E + KP+ V+YN LI+ + + A ++L EM + G++P
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 386 NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
+V+S YN +G + + ++++A L+
Sbjct: 327 DVIS-----------------------------------YNMILGVFFRIKKWEEATYLF 351
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
+ M ++ D+++Y I+ G C+ ++ EA ++EM+
Sbjct: 352 EDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 159/365 (43%), Gaps = 42/365 (11%)
Query: 175 LVTHNILLSAFKSGSQYSKALS--YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
L+ ++I+++ GS+ L L T I P VI+ + + +A+ +
Sbjct: 47 LLCYDIIITKL-GGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHM 105
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
F+ M + + C V S S++ G++E + + + G KP +YN L+
Sbjct: 106 FDEMPQYR--CQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGC 162
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV-FEMIKRNKLKPN 351
+ G +AL +F+E+ + +P V++ +L++ + + ++A + +M+K ++P
Sbjct: 163 SQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPT 222
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
+ Y +LI A G L A K+ E + +GKI
Sbjct: 223 VHIYASLIKALCQIGELSFAFKLKDE-----------------------AYEGKI----- 254
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
K++ Y++ I S + G ++ + + M +K K D+VTY +LI+G C +
Sbjct: 255 -------KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEN 307
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYT 531
A ++EM+ L Y+ IL + + + EA F M GCSPD ++Y
Sbjct: 308 DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
Query: 532 SMLDA 536
+ D
Sbjct: 368 IVFDG 372
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 119/308 (38%), Gaps = 36/308 (11%)
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNG-FRPDIVSYTSLLNAYGRSQKPQKARGV 339
S++ Y+ ++ M E V +K + P + + +++N +GR + P +A +
Sbjct: 46 SLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHM 105
Query: 340 FEMIKRNKL----------------------------------KPNLVSYNALIDAYGSN 365
F+ + + + KP+ +YN LI +
Sbjct: 106 FDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQS 165
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLL-AACGRCSQKGKIETVLSAAQMRGIKLNTVA 424
G DDA+K+ EM + ++P V+ TL+ C K ++ ++ G++
Sbjct: 166 GCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI 225
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
Y S I + +GE A L + KIK D+ Y+ LIS K + E +EEM
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
Y+ ++ + + A + M G PDV++Y +L + K
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 545 FEPLKYED 552
+ED
Sbjct: 346 EATYLFED 353
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 7/366 (1%)
Query: 38 PFLIKELTQRGSIEHCNLV--FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
P L+ E+ + I+ ++ F W+ + Y ++ YNM I++ Q R LF+E
Sbjct: 644 PELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYE 703
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINA-CGSSG 154
M+ C +T+ +I +GR G A+ +M + PS ST+ LI C G
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763
Query: 155 -NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
N +EA ++M +G PD L A S + + G P T
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL-GKIGFPVTVAY 822
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
+I I L ++ + ++A+ S ++S D +Y SI+H G ++ N M
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERS--LLDQYTYGSIVHGLLQRGDLQKALDKVNSM 880
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
G KP + Y +L+ + ++ L +++ P +V+YT+++ Y K
Sbjct: 881 KEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKV 940
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
++A F ++ P+ +Y+ I+ +DA+K+L EM GI P+ ++ T+
Sbjct: 941 EEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
Query: 394 LAACGR 399
R
Sbjct: 1001 FYGLNR 1006
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 163/365 (44%), Gaps = 3/365 (0%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
YN +++ G + N + +M NG D+ T IL+S + + K L FE M+
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
+ D T NI+I L + D A++ + M EK + +Y ++ + S +
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKG--ITFGLRTYKMLLDCIAKSEK 309
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
++ ++ + M+ ++ L+ ++ G KEAL + E+K D +
Sbjct: 310 VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 369
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
L+ R+ + A + +++KR KL + V Y +I Y + A++ +++ G
Sbjct: 370 LVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSG 428
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
P V + ++ + Q K + + GI+ ++VA + + +L +A
Sbjct: 429 RPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAW 488
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAY 502
++ SM +K IK +Y+I + C+ S+Y E + +M K+ + +++S ++ +
Sbjct: 489 KVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSM 548
Query: 503 SKQGQ 507
K G+
Sbjct: 549 EKNGE 553
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/415 (20%), Positives = 168/415 (40%), Gaps = 40/415 (9%)
Query: 6 SEVAEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRG-SIEHCNL-VFQWMKNQ 63
S V ++ S+ DD+ + + + + + P +++ + +R + H + F W+K +
Sbjct: 123 SPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQK 182
Query: 64 RNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
+ R IYN M+ + +D L EM++ C D T+ LI+ +G+A +
Sbjct: 183 DGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGK 242
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
+ + + M ++ + YN +I + +G AL K+M + G+ L T+ +LL
Sbjct: 243 GLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 302
Query: 184 -----------------------------------AFKSGSQYSKALSYFELMKGTHIRP 208
+F + +AL +K +
Sbjct: 303 CIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
D I++ L + + A++I + M+ +K + D Y II Y +
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD---DSNVYGIIISGYLRQNDVSKALE 419
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
F ++ G P + +Y ++ ++ +FNE+ +NG PD V+ T+++ +
Sbjct: 420 QFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL 479
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
+ +A VF ++ +KP SY+ + + D+ IKI +M I
Sbjct: 480 GQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKI 534
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 113/582 (19%), Positives = 221/582 (37%), Gaps = 77/582 (13%)
Query: 35 KNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFF 94
K F L+K L + + + MK R +++Y ++I + R N + +A F
Sbjct: 365 KYFEILVKGLCRANRMVDALEIVDIMK--RRKLDDSNVYGIIISGYLRQNDVSKALEQFE 422
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 154
+++ P TY ++ + Q+ N+ ++M+ I P ++
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Query: 155 NWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
EA V M + G+ P +++I + S+Y + + F M + I +
Sbjct: 483 RVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFS 542
Query: 215 IVIHCLVKLRQYDKAIDIFNSMREKKSECH----------------------PDVVSYTS 252
VI + K + +K I + S C P +V ++
Sbjct: 543 WVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSA 602
Query: 253 IIHLYSVSGQIENCEAAFNM-------MLAEGIKPSIVSYNA-LVGAYAAHG--MGKEAL 302
+ S +++ E + E ++ S V + LV H G L
Sbjct: 603 LPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVL 662
Query: 303 LVFNEI-KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
F+ + K+NG++ + +Y + G + ++ R +F ++R ++ +I
Sbjct: 663 RFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQ 722
Query: 362 YGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK---------------- 405
YG GL + AI+ +EM+ G+ P+ + L+ C +KG+
Sbjct: 723 YGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVL--CEKKGRNVEEATRTFREMIRSG 780
Query: 406 -----------------------IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
++ L + G + TVAY+ I + +G+ ++AL
Sbjct: 781 FVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV-TVAYSIYIRALCRIGKLEEAL 839
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAY 502
S ++ D TY ++ G + +AL + M + VY+S++ +
Sbjct: 840 SELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYF 899
Query: 503 SKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
K+ Q+ + T M+ C P VVTYT+M+ Y + GK+
Sbjct: 900 FKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVE 941
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 203/505 (40%), Gaps = 67/505 (13%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
F +L+K G I+ + + +KN + C + ++++ R NR+ A + ++
Sbjct: 332 FGYLLKSFCVSGKIKEALELIRELKN-KEMCLDAKYFEILVKGLCRANRMVDALEIV-DI 389
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
+ R D+ Y +I+ + R A+ + + ++ PP STY ++ +
Sbjct: 390 MKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
++ N+ +M +NG+ PD V +++ ++ ++A F M+ I+P + +I
Sbjct: 450 EKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIF 509
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+ L + +YD+ I IFN M K D+ S+ +S +N E
Sbjct: 510 VKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWV-------ISSMEKNGE--------- 553
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
KE + + EI++ SY LN G+++ Q+
Sbjct: 554 ----------------------KEKIHLIKEIQKRS-----NSYCDELNGSGKAEFSQE- 585
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD--DAIKILR-----EMEQDGIQPNVVS 389
E + + P LV +AL A + +D + ++L E Q+ ++ + V
Sbjct: 586 ----EELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQ 641
Query: 390 ICTLLAACGRCSQKGKIETVLS----AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
L K + VL + G K N+ AYN +I ++ + L+
Sbjct: 642 FTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLF 701
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS---SILCAY 502
MR++ T+ I+I + A+ +EM + L S + ++LC
Sbjct: 702 YEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC-- 759
Query: 503 SKQGQ-IVEAESTFNLMKSSGCSPD 526
K+G+ + EA TF M SG PD
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPD 784
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/502 (20%), Positives = 197/502 (39%), Gaps = 44/502 (8%)
Query: 80 HARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPS 139
H NR+ +A +F M+E KP ++Y+ + R+ ++ + I + M + I
Sbjct: 478 HLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIR 537
Query: 140 RSTYNNLINACGSSGNWKEALNVCKKMTD---------NGVG----------------PD 174
++ +I++ +G KE +++ K++ NG G P
Sbjct: 538 DDIFSWVISSMEKNGE-KEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQ 596
Query: 175 LVTHNILLSAFKSGSQYS-----KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK- 228
LV + L A + + + LS + T + +T+ +V++ ++ K
Sbjct: 597 LVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKI 656
Query: 229 ---AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY 285
A+ F S K++ + +Y I + + + F M +G + ++
Sbjct: 657 QGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTW 716
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY--GRSQKPQKARGVFEMI 343
++ Y G+ A+ F E+K G P ++ L+ + + ++A F +
Sbjct: 717 AIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREM 776
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
R+ P+ + G DA L + + G V + A C +
Sbjct: 777 IRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALC----RI 832
Query: 404 GKIETVLSA-AQMRGIK--LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
GK+E LS A G + L+ Y S + L G+ KAL SM++ K Y
Sbjct: 833 GKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVY 892
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
T LI K + + L ++M S Y++++C Y G++ EA + F M+
Sbjct: 893 TSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEE 952
Query: 521 SGCSPDVVTYTSMLDAYTAAGK 542
G SPD TY+ ++ A K
Sbjct: 953 RGTSPDFKTYSKFINCLCQACK 974
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/519 (18%), Positives = 205/519 (39%), Gaps = 59/519 (11%)
Query: 35 KNFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFF 94
K++ +KEL + + +F M + R+DI++ +I ++ ++ L
Sbjct: 504 KSYSIFVKELCRSSRYDEIIKIFNQMHASK-IVIRDDIFSWVISSMEKNGEKEKIH-LIK 561
Query: 95 EMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD------MLRAAIPPSRSTYNNL-- 146
E+Q+ + +Y +N G+A ++ ++DD + ++A+PP+ S + +
Sbjct: 562 EIQK-----RSNSYCDELNGSGKA-EFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDV 615
Query: 147 ---INACGSSGNWKEALNVCKKMT-------------------------------DNGVG 172
SS +W+ +K T NG
Sbjct: 616 QEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYK 675
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMK--GTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
+ +N+ + G + + S F M+ G I DT + I+ + L AI
Sbjct: 676 HNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNI--AI 733
Query: 231 DIFNSMREKKSECHPDVVSYTSIIH-LYSVSGQ-IENCEAAFNMMLAEGIKPSIVSYNAL 288
F M++ P ++ +I L G+ +E F M+ G P
Sbjct: 734 RTFKEMKDMG--LIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+G G K+A + + + GF P V+Y+ + A R K ++A + +
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET 408
+ +Y +++ G L A+ + M++ G +P V +L+ + Q K+
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 409 VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
+ + + V Y + I Y+++G+ ++A +++M ++ D TY+ I+ C
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
+ K +AL + EM+ + S + ++ +++G+
Sbjct: 971 QACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 7/233 (3%)
Query: 313 FRPDIVSYTSLLNAYGRSQK-PQKARGVFEMIK-RNKLKPNLVSYNALIDAYGSNGLLDD 370
F P+IV N R K P A F +K ++ + YN ++ G LD
Sbjct: 153 FEPEIVE-----NVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDM 207
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
+++ EME++G ++ + L++ G+ + GK V + G +L+ AYN I
Sbjct: 208 VDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIR 267
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
S G D AL YK M +K I TY +L+ K K S ++M+ +
Sbjct: 268 SLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEIS 327
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ + +L ++ G+I EA +K+ D + ++ A +M
Sbjct: 328 EHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 189/433 (43%), Gaps = 78/433 (18%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
+I AC +G ++E+L+ ++M +G+ D LL A S+ L E K
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-------SRNLLDREFGK--- 137
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
+IHCLV Y+ D +S+I +YS G++ N
Sbjct: 138 ----------MIHCLVLKFSYES-----------------DAFIVSSLIDMYSKFGEVGN 170
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
F+ + + +V +NA++ YA + EAL + ++K G +PD++++ +L++
Sbjct: 171 ARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALIS 226
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
+ + +K + E++ + KP++VS+ ++I N + A ++M G+ P
Sbjct: 227 GFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP 286
Query: 386 NVVSICTLLAACGRCS--QKGKI---ETVLSAAQMRGI---------------------- 418
N +I TLL AC + + GK +V++ + G
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 419 ----KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG--SCKMSK 472
K TV +NS I Y N G DKA+ L+ M K D +T+T +++ ++
Sbjct: 347 RKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
G+ L + + + +P E Y+ ++ + G++VEA + ++K+ PD+ + +
Sbjct: 407 LGQNLFLLMQNKYRIVP-RLEHYACMVDLLGRAGKLVEA---YEMIKAMRMEPDLFVWGA 462
Query: 533 MLDAYTAAGKMNF 545
+L A G M
Sbjct: 463 LLAACRNHGNMEL 475
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 184/398 (46%), Gaps = 25/398 (6%)
Query: 48 GSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAET 107
G + HC LV ++ +Y + I + +I ++++ + AR +F ++ E D
Sbjct: 136 GKMIHC-LVLKF-----SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE----QDLVV 185
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
+NA+I+ + Q A+N++ DM I P T+N LI+ N ++ + + M
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 168 DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 227
+G PD+V+ ++S Q KA F+ M + P++ T+ ++ L
Sbjct: 246 LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMK 305
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
+I E H V S +++ +Y G I F + K + V++N+
Sbjct: 306 HGKEIHGYSVVTGLEDHGFVRS--ALLDMYGKCGFISEAMILFR----KTPKKTTVTFNS 359
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK-RN 346
++ YA HG+ +A+ +F++++ G + D +++T++L A + + +F +++ +
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
++ P L Y ++D G G L +A ++++ M ++P++ LLAAC G +
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR---MEPDLFVWGALLAAC---RNHGNM 473
Query: 407 ETV-LSAAQMRGIKLNTVAYNSAIGS-YLNVGEYDKAL 442
E ++A + ++ + S Y N G ++ +
Sbjct: 474 ELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVV 511
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 163/353 (46%), Gaps = 43/353 (12%)
Query: 79 LHARHNRIDQARGLFFE--MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 136
L A N +D+ G + ++ + DA ++LI+ + + G+ A + D+ +
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 137 PPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALS 196
+N +I+ ++ EALN+ K M G+ PD++T N L+S F K
Sbjct: 184 ----VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 197 YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI--- 253
ELM +PD + +I LV Q +KA D F M +P+ + ++
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHG--LYPNSATIITLLPA 297
Query: 254 ------------IHLYSVSGQIENC----EAAFNM-----MLAEGI-------KPSIVSY 285
IH YSV +E+ A +M ++E + K + V++
Sbjct: 298 CTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTF 357
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK- 344
N+++ YA HG+ +A+ +F++++ G + D +++T++L A + + +F +++
Sbjct: 358 NSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQN 417
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+ ++ P L Y ++D G G L +A ++++ M ++P++ LLAAC
Sbjct: 418 KYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR---MEPDLFVWGALLAAC 467
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 152/357 (42%), Gaps = 3/357 (0%)
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
+Y+ ++ A G + ++V K M GV PDL I + +F +A+ FE
Sbjct: 153 SYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEES 212
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSG 261
+ ++ T + N ++ CL + A +FN+ KK D SY +I +S G
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA---KKGNIPFDSCSYNIMISGWSKLG 269
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
++E E M+ G P +SY+ L+ G +++ +F+ IK G PD Y
Sbjct: 270 EVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYN 329
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+++ + ++ ++ + + + +PNL +Y+ L+ + DA++I EM
Sbjct: 330 AMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 389
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
G+ P + + L + ++ G +++ AY + G+
Sbjct: 390 GVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGML 449
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSI 498
L ++ M++ +D Y ++ G C + A+ MEE M ++ VYS +
Sbjct: 450 LNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 154/373 (41%), Gaps = 3/373 (0%)
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
GV D+ +++++L A +S + + M + PD L I + V++ +A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
I++F +C + S+ +++ + ++ FN I SYN ++
Sbjct: 206 IELFEESESFGVKCSTE--SFNALLRCLCERSHVSAAKSVFNAKKG-NIPFDSCSYNIMI 262
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK 349
++ G +E V E+ ++GF PD +SY+ L+ GR+ + + +F+ IK
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 350 PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETV 409
P+ YNA+I + S D++++ R M + +PN+ + L++ + + +
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 410 LSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
RG+ T S + + G A+ +Y+ RK + Y +L+ +
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
K G L+ +EM P EVY I+ G + A G P+
Sbjct: 443 FGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFV 502
Query: 530 YTSMLDAYTAAGK 542
Y+ + A+ K
Sbjct: 503 YSRLSSKLMASNK 515
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 140/323 (43%), Gaps = 8/323 (2%)
Query: 35 KNFPFLIKELTQRGSIEHCNLVFQWMKNQRNY--CARNDIYNMMIRLHARHNRIDQARGL 92
++F L++ L +R + VF K + C+ YN+MI ++ +++ +
Sbjct: 222 ESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCS----YNIMISGWSKLGEVEEMEKV 277
Query: 93 FFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGS 152
EM E PD +Y+ LI GR G+ ++ I D++ P + YN +I S
Sbjct: 278 LKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 153 SGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTT 212
+ ++ E++ ++M D P+L T++ L+S G + S AL FE M + P T
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGL 397
Query: 213 LNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
+ + L A+ I+ + +K+ C +Y ++ S G+ ++
Sbjct: 398 VTSFLKPLCSYGPPHAAMVIYQ--KSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
M G + Y +V G + A+LV E + GF P+ Y+ L + S K
Sbjct: 456 MQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNK 515
Query: 333 PQKARGVFEMIKRNKLKPNLVSY 355
+ A +F IK+ + N S+
Sbjct: 516 TELAYKLFLKIKKARATENARSF 538
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 297 MGKEALLVFNE--IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
+ EA++ F + +++ G D+ SY+ +L A GR + V + + + P+L
Sbjct: 129 LSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLEC 188
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
+D++ + AI++ E E G++ + S LL S ++V +A +
Sbjct: 189 LTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK 248
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
I ++ +YN I + +GE ++ + K M + D ++Y+ LI G + +
Sbjct: 249 -GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIN 307
Query: 475 EALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+++ + + H VY++++C + E+ + M C P++ TY+ ++
Sbjct: 308 DSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
Query: 535 DAYTAAGKMN 544
K++
Sbjct: 368 SGLIKGRKVS 377
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 222/533 (41%), Gaps = 108/533 (20%)
Query: 56 VFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAH 115
VF MK +RN + +I +AR++ D+ LF MQ +P++ T+ A +
Sbjct: 150 VFDEMK-ERNVVT----WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVL 204
Query: 116 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 175
G + + +++ + + N+LIN GN ++A + + D +
Sbjct: 205 AEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA----RILFDKTEVKSV 260
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS 235
VT N ++S + + +AL F M+ ++R ++ VI L++
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL--------- 311
Query: 236 MREKKSECHPDVVSY---------TSIIHLYSVSGQIENCEA---AFNMMLAEGIKPSIV 283
+ H VV Y T+++ YS C A A + G ++V
Sbjct: 312 --RFTEQLHCSVVKYGFLFDQNIRTALMVAYS------KCTAMLDALRLFKEIGCVGNVV 363
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY----------------------- 320
S+ A++ + + +EA+ +F+E+K+ G RP+ +Y
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTN 423
Query: 321 --------TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
T+LL+AY + K ++A VF I ++V+++A++ Y G + AI
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGID----DKDIVAWSAMLAGYAQTGETEAAI 479
Query: 373 KILREMEQDGIQPNVVSICTLLAACGRC-------------------------------- 400
K+ E+ + GI+PN + ++L C
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 401 -SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
++KG IE+ + R + + V++NS I Y G+ KAL ++K M+K+K+K D VT
Sbjct: 540 YAKKGNIESAEEVFK-RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 460 YTILISGSCKMSKYGEALSFMEEMMH-LKLPVSKEVYSSILCAYSKQGQIVEA 511
+ + + E + + M+ K+ +KE S ++ YS+ GQ+ +A
Sbjct: 599 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 166/366 (45%), Gaps = 50/366 (13%)
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
D + ++ +K + +F+ M+E+ +VV++T++I Y+ + +
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKER------NVVTWTTLISGYARNSMNDEVLT 180
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
F M EG +P+ ++ A +G A G+G L V + +NG I SL+N Y
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
+ +KAR +F+ + ++K ++V++N++I Y +NGL +A+ + M + ++ +
Sbjct: 241 KCGNVRKARILFD---KTEVK-SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES 296
Query: 389 SICTLLAACG-----------RCSQ-------KGKIETVL------SAAQMRGIKL---- 420
S +++ C CS I T L A + ++L
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 421 ----NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
N V++ + I +L ++A+ L+ M++K ++ + TY+++++ +S
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS--- 413
Query: 477 LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
+++ S V +++L AY K G++ EA F+ + D+V +++ML
Sbjct: 414 -EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAG 468
Query: 537 YTAAGK 542
Y G+
Sbjct: 469 YAQTGE 474
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 52/264 (19%)
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
GF D+ TSL++ Y + + R VF+ +K N+V++ LI Y N + D+
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEV 178
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKG------KIETV---------------- 409
+ + M+ +G QPN T AA G +++G ++ TV
Sbjct: 179 LTLFMRMQNEGTQPNSF---TFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSL 235
Query: 410 ----LSAAQMRGIKL--------NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
L +R ++ + V +NS I Y G +ALG++ SMR ++
Sbjct: 236 INLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSE 295
Query: 458 VTYTILISGSCKMSKYGEALSFMEEM----MHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
++ +I K+ + L F E++ + + + ++++ AYSK +++A
Sbjct: 296 SSFASVI----KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA-- 349
Query: 514 TFNLMKSSGCSPDVVTYTSMLDAY 537
L K GC +VV++T+M+ +
Sbjct: 350 -LRLFKEIGCVGNVVSWTAMISGF 372
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 168/349 (48%), Gaps = 16/349 (4%)
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
NALI+ + R G A +++ R + L++ G+ +A N+ + D
Sbjct: 318 NALISMYSRCGGVETARRLIEQ--RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
D+V ++ ++ Y +A++ F M G RP++ TL ++ L
Sbjct: 376 R----DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSH 431
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
I S K E + VS ++I +Y+ +G I + AF+++ E VS+ ++
Sbjct: 432 GKQIHGSA-VKSGEIYSVSVS-NALITMYAKAGNITSASRAFDLIRCE---RDTVSWTSM 486
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR-NK 347
+ A A HG +EAL +F + G RPD ++Y + +A + + R F+M+K +K
Sbjct: 487 IIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDK 546
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE 407
+ P L Y ++D +G GLL +A + + +M I+P+VV+ +LL+AC R + +
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP---IEPDVVTWGSLLSAC-RVHKNIDLG 602
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
V + + N+ AY++ Y G++++A + KSM+ ++K +
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKE 651
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/519 (21%), Positives = 214/519 (41%), Gaps = 64/519 (12%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N ++ +++ +D F ++ + D+ ++ +I + GQ+ A+ +M DM+
Sbjct: 83 WNTVLSAYSKRGDMDSTCEFFDQLPQ----RDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 133 RAAIPPSRSTYNNLINA-----CGSSGNWKEALNV------------------------- 162
+ I P++ T N++ + C +G + V
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 163 -CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
K + D V D+ + N +++ Q A++ FE M D T N +I
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA----ERDIVTWNSMISGFN 254
Query: 222 KLRQYD-KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
+ R YD +A+DIF+ M + S PD + S++ + ++ + + ++ G
Sbjct: 255 Q-RGYDLRALDIFSKML-RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI 312
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP-DIVSYTSLLNAYGRSQKPQKARGV 339
S + NAL+ Y+ G + A + I+Q G + I +T+LL+ Y + +A+ +
Sbjct: 313 SGIVLNALISMYSRCGGVETARRL---IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
F +K ++V++ A+I Y +G +AI + R M G +PN ++ +L+
Sbjct: 370 FVSLKDR----DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
+ + + +A G + N+ I Y G A + +R ++ D+V+
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER---DTVS 482
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
+T +I + EAL E M+ L Y + A + G + + F++MK
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Query: 520 S-SGCSPDVVTYTSMLDAYTAAG----------KMNFEP 547
P + Y M+D + AG KM EP
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 200/455 (43%), Gaps = 33/455 (7%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N MI LH + ++D A F +M E D T+N++I+ + G A++I ML
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAE----RDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 133 R-AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKS---- 187
R + + P R T ++++AC + E L + K++ + V I+L+A S
Sbjct: 271 RDSLLSPDRFTLASVLSACAN----LEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 188 --GSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
G + ++ L K I T L+ +KL ++A +IF S++++
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLD----GYIKLGDMNQAKNIFVSLKDR------ 376
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
DVV++T++I Y G F M+ G +P+ + A++ ++ +
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
++G + +L+ Y ++ A F++I+ + + VS+ ++I A +
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER---DTVSWTSMIIALAQH 493
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVA- 424
G ++A+++ M +G++P+ ++ + +AC + + + T++
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
Y + + G +A + + K I+ D VT+ L+S +C++ K + E +
Sbjct: 554 YACMVDLFGRAGLLQEA---QEFIEKMPIEPDVVTWGSLLS-ACRVHKNIDLGKVAAERL 609
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
L P + YS++ YS G+ EA MK
Sbjct: 610 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 176/401 (43%), Gaps = 27/401 (6%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N +I H ++ + + LF M R +PD T+ +++ A G + M I ++
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIV 509
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNV----------------CKKMTDNGVGPDLV 176
++ + + S +LI+ G +EA + +KM + + V
Sbjct: 510 KSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCV 569
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
+ N ++S + Q A F M I PD T V+ L I +
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+K E DV ++++ +YS G + + +M + ++ V++NA++ YA HG
Sbjct: 630 IKK--ELQSDVYICSTLVDMYSKCGDLHDSR----LMFEKSLRRDFVTWNAMICGYAHHG 683
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSY 355
G+EA+ +F + +P+ V++ S+L A K F M+KR+ L P L Y
Sbjct: 684 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 743
Query: 356 NALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQM 415
+ ++D G +G + A++++REM + + V TLL C ++ +AA +
Sbjct: 744 SNMVDILGKSGKVKRALELIREMP---FEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 800
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
R ++ AY Y + G ++K L ++MR K+K +
Sbjct: 801 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE 841
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 188/446 (42%), Gaps = 37/446 (8%)
Query: 139 SRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF 198
+R +YN +I + +AL + ++ +G+G D ++ + + A S+ L +
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 199 ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYS 258
L + + D N I K + +A +F+ MR + D VS+ +II +
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR------DAVSWNAIIAAHE 459
Query: 259 VSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIV 318
+G+ F ML I+P ++ +++ A +G + + + I ++G +
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY-GMEIHSSIVKSGMASNSS 518
Query: 319 SYTSLLNAYGRSQKPQKARGV----------------FEMIKRNKLKPNLVSYNALIDAY 362
SL++ Y + ++A + E + +L+ VS+N++I Y
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
+DA + M + GI P+ + T+L C + G + + + + ++ +
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 638
Query: 423 VAYNSAIGSYLNVGE-YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFME 481
++ + Y G+ +D L KS+R+ D VT+ +I G K EA+ E
Sbjct: 639 YICSTLVDMYSKCGDLHDSRLMFEKSLRR-----DFVTWNAMICGYAHHGKGEEAIQLFE 693
Query: 482 EMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAA 540
M+ + + + SIL A + G I + F +MK G P + Y++M+D +
Sbjct: 694 RMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKS 753
Query: 541 GKMNFE-------PLKYEDGFWKCML 559
GK+ P + +D W+ +L
Sbjct: 754 GKVKRALELIREMPFEADDVIWRTLL 779
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 119/608 (19%), Positives = 246/608 (40%), Gaps = 108/608 (17%)
Query: 11 QVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIE-----HCNLV--------- 56
+V S + + D LN+ V + NF F+ KE ++G++E H +++
Sbjct: 29 RVPSFSYFTD---FLNQ-VNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTF 84
Query: 57 -----FQWMKNQRNYCARNDIY-----------NMMIRLHARHNRIDQARGLFFEMQEWR 100
Q N R++ + + ++ N MI +++ N + +A FF M R
Sbjct: 85 VLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANS-FFNMMPVR 143
Query: 101 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 160
D ++N++++ + + G+ ++ + DM R I T+ ++ C + +
Sbjct: 144 ---DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGM 200
Query: 161 NVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
+ + G D+V + LL + G ++ ++L F+ + ++ + + +I
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP----EKNSVSWSAIIAGC 256
Query: 221 VKLRQYDKAIDIFNSMREK---------------------------------KSECHPDV 247
V+ A+ F M++ KS+ D
Sbjct: 257 VQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG 316
Query: 248 VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
+ T+ + +Y+ +++ + F+ +E + SYNA++ Y+ G +ALL+F+
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDN--SENLNRQ--SYNAMITGYSQEEHGFKALLLFHR 372
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
+ +G D +S + + A + + ++ + ++ L ++ NA ID YG
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK-IETVLSAAQMRGIKLNTVAYN 426
L +A ++ EM + + VS ++AA Q GK ET+ M ++ +
Sbjct: 433 LAEAFRVFDEMR----RRDAVSWNAIIAA---HEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 427 SAIGSYLNV---GEYDKALGLYKSMRKKKIKADSVTYTILIS--GSCKMSKYGE------ 475
GS L G + ++ S+ K + ++S LI C M + E
Sbjct: 486 --FGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF 543
Query: 476 --------ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDV 527
+ +E+M + +L ++SI+ Y + Q +A+ F M G +PD
Sbjct: 544 FQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDK 603
Query: 528 VTYTSMLD 535
TY ++LD
Sbjct: 604 FTYATVLD 611
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 127/284 (44%), Gaps = 12/284 (4%)
Query: 261 GQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
G +E + A M+ G +P+ N L+ Y A +VF+++ D+VS+
Sbjct: 62 GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR----DVVSW 117
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
++N Y +S KA F M+ ++VS+N+++ Y NG +I++ +M +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVR----DVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
+GI+ + + +L C + G + VA ++ + Y + +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
+L +++ + +K +SV+++ +I+G + + AL F +EM + VS+ +Y+S+L
Sbjct: 234 SLRVFQGIPEK----NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ + ++ S + D + T+ LD Y M
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 139/332 (41%), Gaps = 20/332 (6%)
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
RP T LN ++ R + A +F+ M + DVVS+ +I+ YS S +
Sbjct: 79 FRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR------DVVSWNKMINGYSKSNDMFK 132
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
+ FNMM +VS+N+++ Y +G +++ VF ++ + G D ++ +L
Sbjct: 133 ANSFFNMMPVR----DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI-Q 384
+ + ++ R ++V+ +AL+D Y +++++ + GI +
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ-----GIPE 243
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
N VS ++A C + + Q ++ Y S + S + E L
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ K AD + T + K +A + +L +++ Y++++ YS+
Sbjct: 304 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL----NRQSYNAMITGYSQ 359
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
+ +A F+ + SSG D ++ + + A
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 191/425 (44%), Gaps = 38/425 (8%)
Query: 125 MNIMDDMLR-------AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVT 177
M++ +D+LR I P ++ +I + G G +AL +K+ G D
Sbjct: 84 MDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQAL--VEKL---GFFKDPYV 138
Query: 178 HNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMR 237
N+++ + A F+ + + + N++I K ++A +F+ M
Sbjct: 139 RNVIMDMYVKHESVESARKVFDQIS----QRKGSDWNVMISGYWKWGNKEEACKLFDMMP 194
Query: 238 EKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGM 297
E DVVS+T +I ++ +EN F+ M + S+VS+NA++ YA +G
Sbjct: 195 EN------DVVSWTVMITGFAKVKDLENARKYFDRM----PEKSVVSWNAMLSGYAQNGF 244
Query: 298 GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNA 357
++AL +FN++ + G RP+ ++ +++A P R + ++I +++ N A
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 358 LIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG 417
L+D + + A +I E+ G Q N+V+ +++ R + R
Sbjct: 305 LLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR- 360
Query: 418 IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK-KKIKADSVTYTILISGSCKMSKYGEA 476
N V++NS I Y + G+ A+ ++ M K D VT ++S M+
Sbjct: 361 ---NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 477 LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
++ + ++ ++ Y S++ Y++ G + EA+ F+ MK DVV+Y ++ A
Sbjct: 418 DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTA 473
Query: 537 YTAAG 541
+ A G
Sbjct: 474 FAANG 478
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/486 (19%), Positives = 209/486 (43%), Gaps = 67/486 (13%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
+FP +IK + G ++FQ + + + + N+++ ++ +H ++ AR +F +
Sbjct: 108 SFPVVIKSAGRFG------ILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQ 161
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
+ + + +N +I +G W+W GN
Sbjct: 162 ISQRK----GSDWNVMI-----SGYWKW------------------------------GN 182
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+EA + M +N D+V+ ++++ F A YF+ M + + N
Sbjct: 183 KEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKSV----VSWNA 234
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLA 275
++ + + A+ +FN M + P+ ++ +I S + ++
Sbjct: 235 MLSGYAQNGFTEDALRLFNDM--LRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 276 EGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
+ ++ + AL+ +A + A +FNE+ G + ++V++ ++++ Y R
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSS 349
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG-IQPNVVSICTLL 394
AR +F+ + K N+VS+N+LI Y NG AI+ +M G +P+ V++ ++L
Sbjct: 350 ARQLFDTMP----KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVL 405
Query: 395 AACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
+ACG + + ++ + IKLN Y S I Y G +A ++ M+++
Sbjct: 406 SACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER--- 462
Query: 455 ADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAEST 514
D V+Y L + E L+ + +M + + Y+S+L A ++ G + E +
Sbjct: 463 -DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Query: 515 FNLMKS 520
F +++
Sbjct: 522 FKSIRN 527
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 40/313 (12%)
Query: 72 IYNMMIRLHARHN-------------RIDQA--RGLFFEMQEWRCKPDAETYNALINAHG 116
++N M+RL R N R D + R L + E R + + AL++ H
Sbjct: 251 LFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHA 310
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 176
+ + A I +++ + T+N +I+ G+ A +++ D ++V
Sbjct: 311 KCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSA----RQLFDTMPKRNVV 363
Query: 177 THNILLSAFKSGSQYSKALSYFE-LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNS 235
+ N L++ + Q + A+ +FE ++ +PD T+ V+ + + I +
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY 423
Query: 236 MREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAH 295
+R K++ + Y S+I +Y+ G + + F+ M +VSYN L A+AA+
Sbjct: 424 IR--KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAAN 477
Query: 296 GMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY 355
G G E L + +++K G PD V+YTS+L A R+ ++ + +F+ I+
Sbjct: 478 GDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR----------- 526
Query: 356 NALIDAYGSNGLL 368
N L D Y LL
Sbjct: 527 NPLADHYACMDLL 539
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 140/332 (42%), Gaps = 31/332 (9%)
Query: 216 VIHCLVKLRQ---YDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM 272
+I C +LR Y + I F+S+ P+V S+ +S + +
Sbjct: 45 IISCCTRLRAPSYYTRLI--FDSV------TFPNVFVVNSMFKYFSKMDMANDVLRLYEQ 96
Query: 273 MLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQK 332
GI P S+ ++ + G+ +AL +++ GF D +++ Y + +
Sbjct: 97 RSRCGIMPDAFSFPVVIKSAGRFGILFQAL-----VEKLGFFKDPYVRNVIMDMYVKHES 151
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
+ AR VF+ I + K +N +I Y G ++A K+ M ++ +VVS
Sbjct: 152 VESARKVFDQISQRKGS----DWNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTV 203
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
++ + R + + V++N+ + Y G + AL L+ M +
Sbjct: 204 MITGFAKVKDLENARKYFD----RMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAE 512
++ + T+ I+IS + S ++ + ++ ++ V +++L ++K I A
Sbjct: 260 VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSAR 319
Query: 513 STFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
FN + G ++VT+ +M+ YT G M+
Sbjct: 320 RIFNEL---GTQRNLVTWNAMISGYTRIGDMS 348
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 188/415 (45%), Gaps = 31/415 (7%)
Query: 138 PSRSTYNNLINACGSSGNWKEA-LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALS 196
P+ ++N +I ++ N EA L++ ++M +G+ PD T+N + A + S
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 197 YFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHL 256
+ + D + +I K Q A +F+ + E+ D VS+ S+I
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER------DTVSWNSMISG 207
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG---MGK--EALLVFNEIKQN 311
YS +G ++ F M EG +P + +++GA + G G+ E + + +I +
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 267
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
F + L++ YG+ AR VF +MIK+++ V++ A+I Y NG +
Sbjct: 268 TFLG-----SKLISMYGKCGDLDSARRVFNQMIKKDR-----VAWTAMITVYSQNGKSSE 317
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIG 430
A K+ EME+ G+ P+ ++ T+L+ACG + + + A ++ N +
Sbjct: 318 AFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVD 377
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
Y G ++AL ++++M K + T+ +I+ EAL + M +P
Sbjct: 378 MYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRM---SVPP 430
Query: 491 SKEVYSSILCAYSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKMN 544
S + +L A G + + F+ M S G P + YT+++D + AG ++
Sbjct: 431 SDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLD 485
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 21/328 (6%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N MI ++ A LF +M+E +PD T +++ A G R + + +
Sbjct: 201 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
I S + LI+ G G+ A V +M + D V +++ + + S
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSS 316
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE--CHPDVVSY 250
+A F M+ T + PD TL+ V+ + A+++ + SE ++
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSV----GALELGKQIETHASELSLQHNIYVA 372
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T ++ +Y G++E F M + + ++NA++ AYA G KEALL+F+ +
Sbjct: 373 TGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRM-- 426
Query: 311 NGFRPDIVSYTSLLNAYGRSQ-KPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
P +++ +L+A + Q R EM L P + Y +ID G+LD
Sbjct: 427 -SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLD 485
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAAC 397
+A + ME+ +P+ + + +L AC
Sbjct: 486 EAWEF---MERFPGKPDEIMLAAILGAC 510
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 152/359 (42%), Gaps = 33/359 (9%)
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNM- 272
N +I V+L ++ + +F+ E P+ S+ +I ++ + EAA ++
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEE------PNHYSFNYMIR--GLTNTWNDHEAALSLY 120
Query: 273 --MLAEGIKPSIVSYNALVGAYAAH---GMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
M G+KP +YN + A A G+G+ V + + + G D+ SL+ Y
Sbjct: 121 RRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS---VHSSLFKVGLERDVHINHSLIMMY 177
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
+ + AR +F+ I + VS+N++I Y G DA+ + R+ME++G +P+
Sbjct: 178 AKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 233
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
++ ++L AC + A + I L+T + I Y G+ D A ++
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
M IK D V +T +I+ + K EA EM + S++L A G
Sbjct: 294 M----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGA 349
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN-----FE--PLKYEDGFWKCML 559
+ + ++ T ++D Y G++ FE P+K E W M+
Sbjct: 350 LELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE-ATWNAMI 407
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 159/395 (40%), Gaps = 58/395 (14%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIR-LHARHNRIDQARGLFFEMQ 97
FLI + + G + + +F + +Y +N MIR L N + A L+ M+
Sbjct: 70 FLIPKAVELGDFNYSSFLFSVTEEPNHYS-----FNYMIRGLTNTWNDHEAALSLYRRMK 124
Query: 98 EWRCKPDAETYN-----------------------------------ALINAHGRAGQWR 122
KPD TYN +LI + + GQ
Sbjct: 125 FSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVG 184
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
+A + D++ ++N++I+ +G K+A+++ +KM + G PD T +L
Sbjct: 185 YARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSML 240
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE 242
A E+ I T + +I K D A +FN M +K
Sbjct: 241 GACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK--- 297
Query: 243 CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEAL 302
D V++T++I +YS +G+ F M G+ P + + ++ A + G +
Sbjct: 298 ---DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 303 LVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAY 362
+ + + +I T L++ YG+ + ++A VFE + N ++NA+I AY
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAY 410
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
G +A+ + M + P+ ++ +L+AC
Sbjct: 411 AHQGHAKEALLLFDRM---SVPPSDITFIGVLSAC 442
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 220/538 (40%), Gaps = 64/538 (11%)
Query: 45 TQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPD 104
T G ++ + VF +K ++ +N+++ A+ + GLF +M + D
Sbjct: 140 TNCGDLKEASRVFDEVKIEKAL-----FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMD 194
Query: 105 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCK 164
+ T++ + + + +L++ S N+L+ + A V
Sbjct: 195 SYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD 254
Query: 165 KMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL-NIVIHC---- 219
+MT+ D+++ N +++ + S K LS F M + I D T+ ++ C
Sbjct: 255 EMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 310
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
L+ L + +I + + C+ +++ +YS G +++ +A F M
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCN-------TLLDMYSKCGDLDSAKAVFREM----SD 359
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
S+VSY +++ YA G+ EA+ +F E+++ G PD+ + T++LN R + + + V
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM--------------------- 378
E IK N L ++ NAL+D Y G + +A + EM
Sbjct: 420 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 379 -----------EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNS 427
E+ P+ ++ +L AC S K + G + NS
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG-EALSFMEEMMHL 486
+ Y G A L+ + K D V++T++I+G M +G EA++ +M
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASK----DLVSWTVMIAGY-GMHGFGKEAIALFNQMRQA 594
Query: 487 KLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK-SSGCSPDVVTYTSMLDAYTAAGKM 543
+ + + S+L A S G + E FN+M+ P V Y ++D G +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 141/302 (46%), Gaps = 26/302 (8%)
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA--HGMGKEALLVFNEIKQNGFRPDI 317
SG F M++ G++ +++ + ++++ G E L F I ++GF
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF--ILKSGFGERN 230
Query: 318 VSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILR 376
SL+ Y ++Q+ AR VF EM +R+ ++S+N++I+ Y SNGL + + +
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTERD-----VISWNSIINGYVSNGLAEKGLSVFV 285
Query: 377 EMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL----NTVAYNSAIGSY 432
+M GI+ ++ +I ++ A C ++ ++ A G+K N+ + Y
Sbjct: 286 QMLVSGIEIDLATIVSVFAGCA----DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 433 LNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ D A +++ M + + V+YT +I+G + GEA+ EEM + +S
Sbjct: 342 SKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVKLFEEME--EEGISP 395
Query: 493 EVY--SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKY 550
+VY +++L ++ + E + +K + D+ +++D Y G M L +
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 551 ED 552
+
Sbjct: 456 SE 457
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 224/541 (41%), Gaps = 94/541 (17%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N+M+ + R R+ A LF M E C +Y LI + + QW AM + +M
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERSCV----SYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 133 RAAIPPSRSTYNNLINACGSSGN-WK--------------------------EALNVC-- 163
I + T +I+AC G W L +C
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 164 --KKMTDNGVGPDLVTHNILLSAF-KSG------------------------------SQ 190
+K+ D +LVT N++L+ + K+G +Q
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+AL Y+ M ++P + ++ + K + + ++ ++ +C+ D +
Sbjct: 286 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCY-DFLQA 344
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T IIH Y+VS I+ F +K I S NAL+ + +GM ++A VF++
Sbjct: 345 T-IIHFYAVSNDIKLALQQFE----ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
DI S+ ++++ Y +S PQ A +F EMI +++KP+ ++ ++ A S G L+
Sbjct: 400 K----DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 370 DAIKILREMEQDGIQPN---VVSICTLLAACGRCSQKGKIETVLSA-AQMRGIKLNTVA- 424
+ + + I PN +I + A C G IET L+ Q + I +T++
Sbjct: 456 EGKRAHDYLNFSTIPPNDNLTAAIIDMYAKC------GSIETALNIFHQTKNISSSTISP 509
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
+N+ I G AL LY ++ IK +S+T+ ++S C ++ E M
Sbjct: 510 WNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMK 569
Query: 485 --HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
H P K Y ++ K G++ EA+ ++K DV+ + +L A G
Sbjct: 570 SDHGIEPDIKH-YGCMVDLLGKAGRLEEAK---EMIKKMPVKADVMIWGMLLSASRTHGN 625
Query: 543 M 543
+
Sbjct: 626 V 626
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 177/436 (40%), Gaps = 68/436 (15%)
Query: 147 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
+ +C SS + + ++ +G+ + N +L+ + + A S F H
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR----DHA 103
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
+ D+ + NI++ V+ R+ A+ +F+ M E+ VSYT++I Y+ + Q
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERS------CVSYTTLIKGYAQNNQWSEA 157
Query: 267 EAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG---------------------------- 298
F M GI + V+ ++ A +H G
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISA-CSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 299 --------KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
K+A +F+E+ + ++V++ +LN Y ++ ++A +F+ I +
Sbjct: 217 MYCLCLCLKDARKLFDEMPER----NLVTWNVMLNGYSKAGLIEQAEELFDQIT----EK 268
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
++VS+ +ID LD+A+ EM + G++P+ V + LL+A R K +
Sbjct: 269 DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLH 328
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
RG + I Y + AL +++ K I + + LI+G K
Sbjct: 329 GTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNA----LIAGFVKN 384
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYS--SILCAYSKQGQIVEAESTF-NLMKSSGCSPDV 527
+A ++ K+++S +++ Y++ A F ++ SS PD
Sbjct: 385 GMVEQAREVFDQTH------DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDA 438
Query: 528 VTYTSMLDAYTAAGKM 543
+T S+ A ++ G +
Sbjct: 439 ITMVSVFSAISSLGSL 454
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 203/480 (42%), Gaps = 72/480 (15%)
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAI----PPSRSTYNNLINACGSSGNWKEALNVCK 164
N +N + + G+ +A RAA P+ +YN ++ A +++ +
Sbjct: 47 NHFVNLYSKCGRLSYA--------RAAFYSTEEPNVFSYNVIVKAYAKDSK----IHIAR 94
Query: 165 KMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
++ D PD V++N L+S + + A+ F+ M+ D TL+ +I
Sbjct: 95 QLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRV 154
Query: 225 QYDKAIDIFNSMREKKSECHPDVVSYTSI----IHLYSVSGQIENCEAAFNMMLAEGIKP 280
K + F+ SY+S+ + YS G + + F M + ++
Sbjct: 155 DLIKQLHCFS--------VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM--DELRD 204
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY------------- 327
VS+N+++ AY H G +AL ++ E+ GF+ D+ + S+LNA
Sbjct: 205 E-VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 328 ------GRSQKPQKARGVF---------------EMIKRNKLKPNLVSYNALIDAYGSN- 365
G Q G+ E + + L P+LV +N +I Y N
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNE 323
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
L ++A+K R+M++ G +P+ S + +AC S + + + A I N ++
Sbjct: 324 ELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISV 383
Query: 426 NSAIGS-YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
N+A+ S Y G A ++ M + ++V++ +I G + EAL + M+
Sbjct: 384 NNALISLYYKSGNLQDARWVFDRMP----ELNAVSFNCMIKGYAQHGHGTEALLLYQRML 439
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKM 543
+ +K + ++L A + G++ E + FN MK + P+ Y+ M+D AGK+
Sbjct: 440 DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKL 499
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 171/395 (43%), Gaps = 25/395 (6%)
Query: 69 RNDI-YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNI 127
R+++ +N MI + +H +A L+ EM K D T +++NA
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 128 MDDMLRAAIPPSRSTYNNLIN---ACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA 184
+++A + + LI+ CG ++ V +++ + PDLV N ++S
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI----LSPDLVVWNTMISG 318
Query: 185 FKSGSQYSK-ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
+ + S+ A+ F M+ RPD + V L + I KS
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG--LAIKSHI 376
Query: 244 HPDVVSYT-SIIHLYSVSGQIENCEAAFNMMLAEGIKPSI--VSYNALVGAYAAHGMGKE 300
+ +S ++I LY SG +++ F+ M P + VS+N ++ YA HG G E
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRM------PELNAVSFNCMIKGYAQHGHGTE 430
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSYNALI 359
ALL++ + +G P+ +++ ++L+A K + + F +K K++P Y+ +I
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
D G G L++A + + M +P V+ LL AC + E + M
Sbjct: 491 DLLGRAGKLEEAERFIDAMP---YKPGSVAWAALLGACRKHKNMALAERAANEL-MVMQP 546
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIK 454
L Y Y + ++++ + KSMR K+I+
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIR 581
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 219/467 (46%), Gaps = 68/467 (14%)
Query: 85 RIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYN 144
+I +AR LF + E D T+ +I + + G R A + D R + T+
Sbjct: 61 KIAEARKLFDGLPE----RDVVTWTHVITGYIKLGDMREARELFD---RVDSRKNVVTWT 113
Query: 145 NLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGT 204
+++ S A + ++M + V V+ N ++ + + KAL F+ M
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
+I + N ++ LV+ + D+A+++F M + DVVS+T+++ + +G+++
Sbjct: 170 NI----VSWNSMVKALVQRGRIDEAMNLFERMPRR------DVVSWTAMVDGLAKNGKVD 219
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
F+ M + +I+S+NA++ YA + EA +F + + D S+ +++
Sbjct: 220 EARRLFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMI 271
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG-I 383
+ R+++ KA G+F+ + + N++S+ +I Y N ++A+ + +M +DG +
Sbjct: 272 TGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSV 327
Query: 384 QPNVVSICTLLAACGRCS-----------------QKGKIET------------VLSAAQ 414
+PNV + ++L+AC + QK +I T +++A +
Sbjct: 328 KPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARK 387
Query: 415 M--RGI--KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
M G+ + + +++NS I Y + G +A+ +Y MRK K +VTY L+
Sbjct: 388 MFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHA 447
Query: 471 SKYGEALSFMEEMMHLK-LPVSKEVYSSILCAYSKQGQIVEAESTFN 516
+ + F ++++ + LP+ +E Y+ ++ + G++ + + N
Sbjct: 448 GLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 169/338 (50%), Gaps = 34/338 (10%)
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
D T VI +KL +A ++F+ + +K +VV++T+++ Y S Q+ E
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSRK-----NVVTWTAMVSGYLRSKQLSIAE- 129
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
M+ E + ++VS+N ++ YA G +AL +F+E+ + +IVS+ S++ A
Sbjct: 130 ---MLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALV 182
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
+ + +A +FE + R ++VS+ A++D NG +D+A ++ M + N++
Sbjct: 183 QRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPE----RNII 234
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
S ++ + ++ + + + R + ++N+ I ++ E +KA GL+ M
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 449 RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMH---LKLPVSKEVYSSILCAYSKQ 505
+K + +++T +I+G + + EAL+ +M+ +K V Y SIL A S
Sbjct: 291 PEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG--TYVSILSACSDL 344
Query: 506 GQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+VE + L+ S + + +++L+ Y+ +G++
Sbjct: 345 AGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 169/348 (48%), Gaps = 43/348 (12%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQ 97
++K L QRG I+ +F+ M R D+ + M+ A++ ++D+AR LF
Sbjct: 177 MVKALVQRGRIDEAMNLFERM-------PRRDVVSWTAMVDGLAKNGKVDEARRLF---- 225
Query: 98 EWRCKPDAE--TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
C P+ ++NA+I + + + ++ D + + +++N +I +
Sbjct: 226 --DCMPERNIISWNAMITGYAQNNR----IDEADQLFQVMPERDFASWNTMITGFIRNRE 279
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTTT-L 213
+A + +M + V ++ +++ + + +AL+ F ++++ ++P+ T +
Sbjct: 280 MNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV 335
Query: 214 NIVIHC-----LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
+I+ C LV+ +Q + I KS + + ++++++YS SG++
Sbjct: 336 SILSACSDLAGLVEGQQIHQLI--------SKSVHQKNEIVTSALLNMYSKSGELIAARK 387
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
F+ L + ++S+N+++ YA HG GKEA+ ++N+++++GF+P V+Y +LL A
Sbjct: 388 MFDNGLV--CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 329 RSQKPQKARGVFEMIKRNKLKP-NLVSYNALIDAYGSNGLLDDAIKIL 375
+ +K F+ + R++ P Y L+D G G L D +
Sbjct: 446 HAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 205/447 (45%), Gaps = 72/447 (16%)
Query: 55 LVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
++FQ M +RN + +N MI +A+ RID+A LF EM E + ++N+++ A
Sbjct: 130 MLFQEMP-ERNVVS----WNTMIDGYAQSGRIDKALELFDEMPE----RNIVSWNSMVKA 180
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD 174
+ G+ AMN+ + M R + ++ +++ +G EA +++ D +
Sbjct: 181 LVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEA----RRLFDCMPERN 232
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
+++ N +++ + ++ +A F++M D + N +I ++ R+ +KA +F+
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG-IKPSIVSY-------- 285
M EK +V+S+T++I Y + + E F+ ML +G +KP++ +Y
Sbjct: 289 RMPEK------NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 286 --NALVGAYAAHGMGKEALLVFNEIK---------------------QNGF--RPDIVSY 320
LV H + +++ NEI NG + D++S+
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
S++ Y ++A ++ ++++ KP+ V+Y L+ A GL++ ++ +++ +
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Query: 381 DGIQPNVVSICT-LLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
D P T L+ CGR G+++ V + +L+ Y G+ L+
Sbjct: 463 DESLPLREEHYTCLVDLCGRA---GRLKDVTNFINCDDARLSRSFY----GAILSACNVH 515
Query: 440 KALGLYKSMRKKKIKA---DSVTYTIL 463
+ + K + KK ++ D+ TY ++
Sbjct: 516 NEVSIAKEVVKKVLETGSDDAGTYVLM 542
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 158/324 (48%), Gaps = 35/324 (10%)
Query: 227 DKAIDIFNSMRE-KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY 285
D+++ +FN +R S P V +I G+I F+ + + +V++
Sbjct: 25 DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGL----PERDVVTW 80
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIK 344
++ Y G +EA +F+ + R ++V++T++++ Y RS++ A +F EM +
Sbjct: 81 THVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPE 137
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKG 404
RN +VS+N +ID Y +G +D A+++ EM + N+VS +++ A Q+G
Sbjct: 138 RN-----VVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKA---LVQRG 185
Query: 405 KIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILI 464
+I+ ++ + R + + V++ + + G+ D+A L+ M ++ I +++ +I
Sbjct: 186 RIDEAMNLFE-RMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMI 240
Query: 465 SGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCS 524
+G + ++ EA + M +++++ + + ++ +A F+ M
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEK--- 293
Query: 525 PDVVTYTSMLDAYTAAGKMNFEPL 548
+V+++T+M+ Y K N E L
Sbjct: 294 -NVISWTTMITGYV-ENKENEEAL 315
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 183/419 (43%), Gaps = 42/419 (10%)
Query: 159 ALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
AL K+ D PD+ N +L + K +S + M+ + PD T V+
Sbjct: 61 ALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLK 120
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI---ENCE--AAFNMM 273
KL R H VV + +++ Y + I NC + +
Sbjct: 121 ACSKL-----------EWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASEL 169
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+ K V+++++ YA G EA+ +F+E+ D V++ ++ + ++
Sbjct: 170 FDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEM 225
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
AR +F+ + ++V++NA+I Y + G +A+ I +EM G P+VV+I +L
Sbjct: 226 DSARELFDRFT----EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSL 281
Query: 394 LAACG-----RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSM 448
L+AC ++ I + +A+ I + T +N+ I Y G D+A+ +++ +
Sbjct: 282 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV 341
Query: 449 RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQI 508
+ + D T+ LI G G ++ EEM LK+ ++ + ++ A S G++
Sbjct: 342 KDR----DLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRV 396
Query: 509 VEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGK-----MNFEPLKYEDG--FWKCML 559
E F+LM+ P++ Y M+D AG+ M E +K E W+ +L
Sbjct: 397 DEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 171/424 (40%), Gaps = 95/424 (22%)
Query: 119 GQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTH 178
G ++A + D++ + P S N+++ S ++ +++ +M GV PD T
Sbjct: 60 GALKYAHKLFDEIPK----PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTF 115
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
+L A S ++ G +R V + L+ + I + + +
Sbjct: 116 TFVLKACSKLEWRSNGFAF----HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFD 171
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENC-----------EAAFNMMLAEGIK-------- 279
++ H V+++S+ Y+ G+I+ + A+N+M+ +K
Sbjct: 172 DSAKAHK--VAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSAR 229
Query: 280 --------PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQ 331
+V++NA++ Y G KEAL +F E++ G PD+V+ SLL+A
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA--- 286
Query: 332 KPQKARGVFEMIKRNK---LKPNLVS---------YNALIDAYGSNGLLDDAIKILR--- 376
G E KR L+ VS +NALID Y G +D AI++ R
Sbjct: 287 ----VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK 342
Query: 377 ---------------------------EMEQDGIQPNVVSICTLLAAC---GRCSQKGKI 406
EM++ + PN V+ ++ AC GR + K
Sbjct: 343 DRDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKY 402
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
+++ M I+ N Y + G+ ++A +SM KI+ +++ + L+ G
Sbjct: 403 FSLMR--DMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM---KIEPNAIVWRTLL-G 456
Query: 467 SCKM 470
+CK+
Sbjct: 457 ACKI 460
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 32/280 (11%)
Query: 273 MLAEGIKPSIVSYNALV--GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRS 330
M+ G+ ++ L+ + + G K A +F+EI +PD+ +L +S
Sbjct: 35 MVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIP----KPDVSICNHVLRGSAQS 90
Query: 331 QKPQKARGVFEMIKRNKLKPNLVSYNALIDA-----YGSNGLLDDAIKILREMEQDGIQP 385
KP+K ++ +++ + P+ ++ ++ A + SNG K++R G
Sbjct: 91 MKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG-KVVRH----GFVL 145
Query: 386 NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
N L+ C G + + K + VA++S Y G+ D+A+ L+
Sbjct: 146 NEYVKNALILFHANCGDLGIASELFDDSA----KAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV--YSSILCAYS 503
M K D V + ++I+G K + A + K+V +++++ Y
Sbjct: 202 DEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRF------TEKDVVTWNAMISGYV 251
Query: 504 KQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
G EA F M+ +G PDVVT S+L A G +
Sbjct: 252 NCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 24/280 (8%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N MI + +A G+F EM++ PD T +L++A G + +L
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 302
Query: 133 RAA-----IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKS 187
A I +N LI+ G+ A+ V + + D DL T N L+ +
Sbjct: 303 ETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR----DLSTWNTLIVGL-A 357
Query: 188 GSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDV 247
++ FE M+ + P+ T VI + D+ F+ MR+ + P++
Sbjct: 358 LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYN-IEPNI 416
Query: 248 VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG---MGK---EA 301
Y ++ + +GQ+E AF + + I+P+ + + L+GA +G +GK E
Sbjct: 417 KHYGCMVDMLGRAGQLEE---AFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEK 473
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
LL + + D V +++ + G+ QK R +F+
Sbjct: 474 LLSMRKDESG----DYVLLSNIYASTGQWDGVQKVRKMFD 509
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 204/484 (42%), Gaps = 67/484 (13%)
Query: 84 NRIDQARGLFFEMQEWRC--KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS 141
NR +A LF E+ E RC K TY+AL+ A R R + M+ P +
Sbjct: 101 NRFREAFELF-EILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQY 159
Query: 142 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM 201
N ++ G +A +++ D +L ++ ++S F + Y +A F++M
Sbjct: 160 MMNRILLMHVKCGMIIDA----RRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMM 215
Query: 202 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT----SIIHLY 257
+T T ++ LR I+ + VV T +I +Y
Sbjct: 216 WEELSDCETHTFAVM------LRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMY 269
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK-------- 309
S G IE+ AF M + + V++N ++ YA HG +EAL + +++
Sbjct: 270 SKCGDIEDARCAFECM----PEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ 325
Query: 310 ---------------------------QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
+NGF +IV+ T+L++ Y + + AR VF+
Sbjct: 326 FTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK 385
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRC-- 400
+ R N++S+NAL+ Y ++G DA+K+ +M + PN V+ +L+AC
Sbjct: 386 LPRK----NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGL 441
Query: 401 SQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
S++G E LS +++ GIK + Y I G D+A+ +R+ +K +
Sbjct: 442 SEQG-WEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF---IRRAPLKTTVNMW 497
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
L++ +C+M + E + E ++ P Y + Y+ G+ EA ++S
Sbjct: 498 AALLN-ACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLES 556
Query: 521 SGCS 524
G S
Sbjct: 557 KGLS 560
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 143/346 (41%), Gaps = 44/346 (12%)
Query: 199 ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYS 258
+++ T I T+ I LV ++ +A ++F + E + V +Y +++
Sbjct: 76 QILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEIL-EIRCSFKVGVSTYDALVEACI 134
Query: 259 VSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIV 318
I + + M++ G +P N ++ + GM +A +F+EI + ++
Sbjct: 135 RLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPER----NLY 190
Query: 319 SYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
SY S+++ + +A +F+M+ ++ ++ A G + ++
Sbjct: 191 SYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCA 250
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEY 438
+ G+ N C L+ +C G IE A + K TVA+N+ I Y G
Sbjct: 251 LKLGVVDNTFVSCGLIDMYSKC---GDIEDARCAFECMPEK-TTVAWNNVIAGYALHGYS 306
Query: 439 DKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSI 498
++AL L MR + D T +I+I S K++K L ++K+ ++S+
Sbjct: 307 EEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK---------------LELTKQAHASL 351
Query: 499 LCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ +G ++V T+++D Y+ G+++
Sbjct: 352 I--------------------RNGFESEIVANTALVDFYSKWGRVD 377
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 180/409 (44%), Gaps = 17/409 (4%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
++R +A + AR +F E+ E + N +I ++ G + + + M
Sbjct: 80 LMRAYASLKDVASARKVFDEIPE----RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
+ P T+ ++ AC SG + T G+ L N L+S + S+A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
+ M R D + N ++ + +++D A+++ M K D + S++
Sbjct: 196 LVLDEMS----RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK--ISHDAGTMASLLP 249
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
S + EN +M G K S+VS+N ++G Y + M EA+ +++ ++ +GF P
Sbjct: 250 AVS-NTTTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEP 307
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
D VS TS+L A G + + + I+R KL PNL+ NALID Y G L+ A +
Sbjct: 308 DAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 376 REMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNV 435
M+ +VVS +++A G + + S Q G+ +++A+ + + + +
Sbjct: 368 ENMKSR----DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 436 GEYDKALGLYKSMRKK-KIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
G ++ +K M KI ++ + K EA F+++M
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 158/394 (40%), Gaps = 82/394 (20%)
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
L+ A+ S + A F+ + ++ +N++I V Y + + +F +M
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNV----IIINVMIRSYVNNGFYGEGVKVFGTM--CG 133
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKE 300
PD ++ ++ S SG I G+ ++ N LV Y G E
Sbjct: 134 CNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSE 193
Query: 301 ALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL------------ 348
A LV +E+ R D+VS+ SL+ Y ++Q+ A V ++ K+
Sbjct: 194 ARLVLDEMS----RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249
Query: 349 ---------------------KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
K +LVS+N +I Y N + +A+++ ME DG +P+
Sbjct: 250 AVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKS 447
VSI ++L ACG S + + + + + N + N+ I Y G +KA ++++
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 448 MRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
M+ + D V++T +IS AY G+
Sbjct: 370 MKSR----DVVSWTAMIS-----------------------------------AYGFSGR 390
Query: 508 IVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
+A + F+ ++ SG PD + + + L A + AG
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 140/322 (43%), Gaps = 20/322 (6%)
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
L+ A +F+ + E+ +V+ +I Y +G F M ++P
Sbjct: 87 LKDVASARKVFDEIPER------NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDH 140
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
++ ++ A + G + + G + L++ YG+ +AR V +
Sbjct: 141 YTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE 200
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+ R ++VS+N+L+ Y N DDA+++ REME I + ++ +LL A +
Sbjct: 201 MSRR----DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT 256
Query: 403 KGKIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
E V+ M + K + V++N IG Y+ +A+ LY M + D+V+
Sbjct: 257 ----ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
T ++ S + KL + + ++++ Y+K G + +A F MKS
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 521 SGCSPDVVTYTSMLDAYTAAGK 542
DVV++T+M+ AY +G+
Sbjct: 373 R----DVVSWTAMISAYGFSGR 390
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 142/335 (42%), Gaps = 53/335 (15%)
Query: 68 ARNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
+R D+ +N ++ +A++ R D A + EM+ + DA T +L+ A
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT----TE 257
Query: 126 NIM--DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
N+M DM S ++N +I + EA+ + +M +G PD V+ +L
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
A S S ++ + P+ N +I K +KA D+F +M+ +
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR---- 373
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
DVVS+T++I Y SG+ G +A+
Sbjct: 374 --DVVSWTAMISAYGFSGR-----------------------------------GCDAVA 396
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAY 362
+F++++ +G PD +++ + L A + ++ R F+++ + K+ P L ++D
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
G G + +A + +++M ++PN LL AC
Sbjct: 457 GRAGKVKEAYRFIQDM---SMEPNERVWGALLGAC 488
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 139/302 (46%), Gaps = 24/302 (7%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
+P+ T+ ++I+A G I +++ + N IN G +G+ +
Sbjct: 131 RPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSS-- 188
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC-- 219
CK D + +LV+ N ++ K L+YF + + PD T V+
Sbjct: 189 -CKLFEDLSI-KNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 220 ---LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
+V+L Q + +F K T+++ LYS G++E+ F+ E
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNK-------CITTALLDLYSKLGRLEDSSTVFH----E 295
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
P +++ A++ AYA HG G++A+ F + G PD V++T LLNA S ++
Sbjct: 296 ITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEG 355
Query: 337 RGVFE-MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+ FE M KR ++ P L Y+ ++D G +GLL DA +++EM ++P+ LL
Sbjct: 356 KHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP---MEPSSGVWGALLG 412
Query: 396 AC 397
AC
Sbjct: 413 AC 414
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 148/357 (41%), Gaps = 30/357 (8%)
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC-EAAFNMML 274
++ C ++L A +F+ M E+ D+VS+ S+I YS G + C E MM+
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPER------DLVSWNSLISGYSGRGYLGKCFEVLSRMMI 125
Query: 275 AE-GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+E G +P+ V++ +++ A G +E + + + G ++ + +N YG++
Sbjct: 126 SEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
+ +FE + NLVS+N +I + NGL + + + G +P+ + +
Sbjct: 186 TSSCKLFEDLSIK----NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAV 241
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
L +C + + G N + + Y +G + + ++ +
Sbjct: 242 LRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEI----T 297
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
DS+ +T +++ +A+ E M+H + ++ +L A S G + E +
Sbjct: 298 SPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH 357
Query: 514 TFNLMKSS----------GCSPDVVTYTSML-DAYTAAGKMNFEPLKYEDGFWKCML 559
F M C D++ + +L DAY +M EP G W +L
Sbjct: 358 YFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEP---SSGVWGALL 411
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 19/316 (6%)
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
A ++F+ M ++ S ++ S+I Y+ GQ E+ A + M +G+KP ++ +
Sbjct: 146 AHEVFDRMSKRDSSP----FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRV 201
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+ A G + + ++ + GF D+ +L+ Y + KAR VF+MI
Sbjct: 202 LKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHK-- 259
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIET 408
+ VS+N+++ Y +GLL +A+ I R M Q+GI+P+ V+I ++LA ++
Sbjct: 260 --DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHG 317
Query: 409 VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
+ RG++ N+ I Y G+ +A ++ M ++ D+V++ +IS
Sbjct: 318 WVIR---RGMEWELSVANALIVLYSKRGQLGQACFIFDQM----LERDTVSWNAIISAHS 370
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM-KSSGCSPDV 527
K S L + E+M + S+L + G + + E F+LM K G P +
Sbjct: 371 KNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKM 427
Query: 528 VTYTSMLDAYTAAGKM 543
Y M++ Y AG M
Sbjct: 428 EHYACMVNLYGRAGMM 443
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 157/338 (46%), Gaps = 21/338 (6%)
Query: 66 YCARND--IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
Y RN+ I + ++RL+A + A +F M + P A +N+LI+ + GQ+
Sbjct: 121 YLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFA--WNSLISGYAELGQYED 178
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
AM + M + P R T+ ++ ACG G+ + + + + G G D+ N L+
Sbjct: 179 AMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVV 238
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
+ KA + F+++ D + N ++ + +A+DIF M + E
Sbjct: 239 MYAKCGDIVKARNVFDMIP----HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE- 293
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
PD V+ +S++ + ++ ++ G++ + NAL+ Y+ G +A
Sbjct: 294 -PDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACF 349
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+F+++ + D VS+ ++++A+ ++ K FE + R KP+ +++ +++
Sbjct: 350 IFDQMLER----DTVSWNAIISAHSKNSNGLK---YFEQMHRANAKPDGITFVSVLSLCA 402
Query: 364 SNGLLDDAIKILREMEQD-GIQPNVVSICTLLAACGRC 400
+ G+++D ++ M ++ GI P + ++ GR
Sbjct: 403 NTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRA 440
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 175/421 (41%), Gaps = 47/421 (11%)
Query: 86 IDQARGLFFEMQEWRCKP-DAETYNALINAHGRAGQWRWAMNIMDDMLRAA--IPPSRST 142
+ A+ LF + P D + +N+++ ++G + + +L++ P RST
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 143 YNNLI-NAC----GSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSY 197
+ L+ +AC S N LN+ M +NG+ PD VT +I + + + +A
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
+ + H PDT T N ++ L K + + + MR+
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDD------------------ 223
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
F+ +KP +VS+ L+ +EA+ + +++ GF+PD
Sbjct: 224 ------------FD------VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 318 VSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
Y +++ + K +A GV++ +K ++P+ ++YN LI G +++A L+
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
M G +P+ + +L+ R + ++L + RG N YN+ +
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
DK + LY+ M+ +K +S Y L+ K K EA + + K YS+
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYST 445
Query: 498 I 498
+
Sbjct: 446 L 446
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 147/318 (46%), Gaps = 23/318 (7%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
++ +R R+D+A+ L E+ E PD TYN L+ + +D+M
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 134 A-AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P ++ LI+ +S N +EA+ + K+ + G PD +N ++ F + S+ S
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A+ ++ MK + PD T N +I L K + ++A +M + E PD +YTS
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE--PDTATYTS 340
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL-----VFNE 307
+++ G+ + M A G P+ +YN L+ HG+ K L+ ++
Sbjct: 341 LMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL-----HGLCKARLMDKGMELYEM 395
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
+K +G + + Y +L+ + +S K +A VF+ V +L DA +
Sbjct: 396 MKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYA---------VDSKSLSDA-SAYST 445
Query: 368 LDDAIKILREMEQDGIQP 385
L+ +K L++ ++ G+ P
Sbjct: 446 LETTLKWLKKAKEQGLVP 463
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 158/367 (43%), Gaps = 5/367 (1%)
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRP-DTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
L + FKS S A S F + T P D N V+ + + + +F + +
Sbjct: 56 LRNPFKS-PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKS 114
Query: 240 KSECHPDVVSYTSIIH--LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGM 297
+ P ++ ++ + I N N+M+ G++P V+ + V + G
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 298 GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA-RGVFEMIKRNKLKPNLVSYN 356
EA + E+ + PD +Y LL + + V EM +KP+LVS+
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR 416
LID ++ L +A+ ++ ++ G +P+ T++ S+ + V +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 417 GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
G++ + + YN+ I G ++A K+M + D+ TYT L++G C+ + A
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 354
Query: 477 LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
LS +EEM + Y+++L K + + + +MKSSG + Y +++ +
Sbjct: 355 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRS 414
Query: 537 YTAAGKM 543
+GK+
Sbjct: 415 LVKSGKV 421
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 157/368 (42%), Gaps = 13/368 (3%)
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFE--LMKGTHIRPDTTTLNIVIH--CLVKLRQYDKA 229
DL HN +L ++ S + + + F+ L + RP +T I++ C
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
+ N M E PD V+ + +G+++ + + + P +YN L+
Sbjct: 144 HRVLNLMVNNGLE--PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 290 GAYAAHGMGKEALLVF---NEIKQN-GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
K+ +V+ +E++ + +PD+VS+T L++ S+ ++A + +
Sbjct: 202 KHLCK---CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
KP+ YN ++ + + +A+ + ++M+++G++P+ ++ TL+ + + +
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
L G + +T Y S + GE AL L + M + + TY L+
Sbjct: 319 ARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLH 378
Query: 466 GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
G CK + + E M + + Y++++ + K G++ EA F+ S
Sbjct: 379 GLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLS 438
Query: 526 DVVTYTSM 533
D Y+++
Sbjct: 439 DASAYSTL 446
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+YN +++ ++ +A G++ +M+E +PD TYN LI +AG+ A + M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ A P +TY +L+N G AL++ ++M G P+ T+N LL
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS 241
K + +E+MK + ++ ++ ++ LVK + +A ++F+ + KS
Sbjct: 387 DKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKS 436
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 8/236 (3%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRN-YCARNDI--YNMMIRLHARHNRIDQARGLFFE 95
FL+K L + + ++V++++ R+ + + D+ + ++I + +A L +
Sbjct: 199 FLLKHLCK---CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
+ KPD YN ++ + A+ + M + P + TYN LI +G
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+EA K M D G PD T+ L++ + ALS E M+ P+ T N
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFN 271
++H L K R DK ++++ M K S + Y +++ SG++ F+
Sbjct: 376 LLHGLCKARLMDKGMELYEMM--KSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 182/417 (43%), Gaps = 44/417 (10%)
Query: 6 SEVAEQVLS-LTLYDD--IDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKN 62
S+ AE++ LT + D ++ LLN + + ++K+L+ G + VF+W +N
Sbjct: 63 SQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALS--VFKWAEN 120
Query: 63 QRNYCARNDIYNMMI----------------------------------RLHARHNRIDQ 88
Q+ + YN +I R +AR ++ +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 148
A G F +M+E+ K ++ +N +++ ++ A + D M + P +Y L+
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240
Query: 149 ACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRP 208
G N V ++M D G PD+V + I+++A +Y +A+ +F M+ + +P
Sbjct: 241 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 300
Query: 209 DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEA 268
+I+ L ++ + A++ F R K S + +Y +++ Y S ++E+
Sbjct: 301 SPHIFCSLINGLGSEKKLNDALEFFE--RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 358
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
+ M +G+ P+ +Y+ ++ KEA V+ + P + +Y ++ +
Sbjct: 359 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC 415
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
++ A +++ +K + P + +++LI A LD+A + EM GI+P
Sbjct: 416 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 165/383 (43%), Gaps = 26/383 (6%)
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
V KK+++ GV + LS FK + E KG + T+ N +I L
Sbjct: 100 VLKKLSNAGV--------LALSVFK----------WAENQKG--FKHTTSNYNALIESLG 139
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K++Q+ + + M+ KK ++ I Y+ + +++ AF+ M G K
Sbjct: 140 KIKQFKLIWSLVDDMKAKKLLSKE---TFALISRRYARARKVKEAIGAFHKMEEFGFKME 196
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+N ++ + +A VF+++K+ F PDI SYT LL +G+ + V
Sbjct: 197 SSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNR 256
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+K +P++V+Y +I+A+ ++AI+ EMEQ +P+ C+L+ G
Sbjct: 257 EMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK 316
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+ ++ G L YN+ +G+Y + A MR K + ++ TY
Sbjct: 317 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
I++ +M + EA + M + E+ + C + ++ ++ MK
Sbjct: 377 IILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIK---IWDEMKGK 433
Query: 522 GCSPDVVTYTSMLDAYTAAGKMN 544
G P + ++S++ A K++
Sbjct: 434 GVLPGMHMFSSLITALCHENKLD 456
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 168/424 (39%), Gaps = 76/424 (17%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
K YNALI + G+ Q++ +++DDM +A S+ T+ + + KEA+
Sbjct: 125 KHTTSNYNALIESLGKIKQFKLIWSLVDDM-KAKKLLSKETFALISRRYARARKVKEAIG 183
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
KM + G + +++ N ++ L
Sbjct: 184 AFHKMEEFG-----------------------------------FKMESSDFNRMLDTLS 208
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
K R A +F+ M++K+ E PD+ SYT ++ + + + M EG +P
Sbjct: 209 KSRNVGDAQKVFDKMKKKRFE--PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPD 266
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
+V+Y ++ A+ +EA+ FNE++Q +P + SL+N G +K A FE
Sbjct: 267 VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 326
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
K + +YNAL+ AY + ++DA K + EM G+ PN +
Sbjct: 327 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNART------------ 374
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
Y+ + + + +A +Y++M + TY
Sbjct: 375 -----------------------YDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYE 408
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
I++ C + A+ +EM + ++SS++ A + ++ EA FN M
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDV 468
Query: 522 GCSP 525
G P
Sbjct: 469 GIRP 472
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/513 (19%), Positives = 212/513 (41%), Gaps = 80/513 (15%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP-PSRSTYNNLINACGSSGNWKEALN 161
P+ YN +++A+ +A + D IP P+ ++NNL+ A +G E +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDR-----IPQPNLFSWNNLLLAYSKAGLISEMES 93
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN-IVIHCL 220
+K+ D D VT N+L+ + A+ + M +R + L + + +
Sbjct: 94 TFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTM----MRDFSANLTRVTLMTM 145
Query: 221 VKLRQYDKAIDIFNSMREK--KSECHPDVVSYTSIIHLYSVSGQIENCEAAF-------- 270
+KL + + + + + K ++ + ++++Y+ G I + + F
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 271 ------------------NMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+ L G++ VS+ A++ A +G+ KEA+ F E+K G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL------------------------ 348
+ D + S+L A G + + + I R
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 349 -------KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
+ N+VS+ A++ YG G ++A+KI +M++ GI P+ ++ ++AC S
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+ A G+ NS + Y G+ D + L+ M + D+V++T
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWT 441
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
++S + + E + ++M+ L + ++ A S+ G + + + F LM S
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 522 -GCSPDVVTYTSMLDAYTAAGKMNFEPLKYEDG 553
G P + Y+ M+D ++ +G++ E +++ +G
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLE-EAMRFING 533
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 173/406 (42%), Gaps = 53/406 (13%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 145
I+ A LF M++ D+ ++ A+I + G + A+ +M + + + +
Sbjct: 221 IEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 146 LINACGSSGNWKEA-------------------------------LNVCKKMTDNGVGPD 174
++ ACG G E L+ K + D +
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
+V+ ++ + + +A+ F M+ + I PD TL I + ++ F+
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ-FH 394
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
H VS S++ LY G I++ FN M VS+ A+V AYA
Sbjct: 395 GKAITSGLIHYVTVS-NSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQ 449
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE-MIKRNKLKPNLV 353
G E + +F+++ Q+G +PD V+ T +++A R+ +K + F+ M + P++
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA 413
Y+ +ID + +G L++A++ + M P+ + TLL+A C KG +E AA
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSA---CRNKGNLEIGKWAA 563
Query: 414 QMRGIKLN---TVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
+ I+L+ Y Y + G++D L + MR+K +K +
Sbjct: 564 ESL-IELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 130/337 (38%), Gaps = 53/337 (15%)
Query: 50 IEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYN 109
+ + VF MK Q+N + + M+ + + R ++A +F +MQ PD T
Sbjct: 321 LHYAKTVFDRMK-QKNVVS----WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 110 ALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN 169
I+A + + + + N+L+ G G+ ++ + +M
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 170 GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
D V+ ++SA+ + + + F+ M ++PD TL
Sbjct: 436 ----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL---------------- 475
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE-GIKPSIVSYNAL 288
T +I S +G +E + F +M +E GI PSI Y+ +
Sbjct: 476 ---------------------TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE-MIKRNK 347
+ ++ G +EA+ N + F PD + +T+LL+A + + E +I+ +
Sbjct: 515 IDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
P Y L Y S G D ++ R M + ++
Sbjct: 572 HHP--AGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 214/476 (44%), Gaps = 39/476 (8%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQ-WRWAMNIMDDML 132
N +IR HA++++ QA +F EMQ + D TY L+ A +GQ W + +M + +
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC--SGQSWLPVVKMMHNHI 143
Query: 133 -RAAIPPSRSTYNNLINA---CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
+ + N LI+ CG G ++A+ + +KM++ D V+ N +L
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGV-RDAMKLFEKMSER----DTVSWNSMLGGLVKA 198
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
+ A F+ M + D + N ++ + R+ KA ++F M E+ + V
Sbjct: 199 GELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMPERNT------V 248
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
S+++++ YS +G +E F+ M ++V++ ++ YA G+ KEA + +++
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
+G + D + S+L A S + ++KR+ L N NAL+D Y G L
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
A + ++ + ++VS T+L G + + S + GI+ + V + +
Sbjct: 367 KKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV 422
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVT-YTILISGSCKMSKYGEALSFMEEMMHLK 487
+ S + G D+ + + SM K V Y L+ ++ + EA+ ++ M
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---- 478
Query: 488 LPVSKEV--YSSILCAYSKQGQI-VEAESTFNLMKSSGCSPDVVTYTSMLDAYTAA 540
P+ V + ++L A ++ + E NL+K C P Y+ + + Y AA
Sbjct: 479 -PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPG--NYSLLSNIYAAA 531
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 187/460 (40%), Gaps = 106/460 (23%)
Query: 92 LFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACG 151
+F ++QE P+ N+LI AH + Q A + +M R + TY L+ AC
Sbjct: 73 VFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC- 127
Query: 152 SSGNWKEALNVCKKMTDN----GVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
S +W L V K M ++ G+ D+ N L+ YS+ G +R
Sbjct: 128 SGQSW---LPVVKMMHNHIEKLGLSSDIYVPNALIDC------YSRC-------GGLGVR 171
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
A+ +F M E+ D VS+ S++ +G++ +
Sbjct: 172 --------------------DAMKLFEKMSER------DTVSWNSMLGGLVKAGELRDAR 205
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
F+ M + ++S+N ++ YA +A +F ++ + + VS+++++ Y
Sbjct: 206 RLFDEM----PQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGY 257
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
++ + AR +F+ K N+V++ +I Y GLL +A +++ +M G++ +
Sbjct: 258 SKAGDMEMARVMFD--KMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Query: 388 VSICTLLAAC---GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
++ ++LAAC G S +I ++L + + N N+ + Y G KA +
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGS---NAYVLNALLDMYAKCGNLKKAFDV 372
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ + KK D V++ ++ G
Sbjct: 373 FNDIPKK----DLVSWNTMLHG-----------------------------------LGV 393
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
G EA F+ M+ G PD VT+ ++L + AG ++
Sbjct: 394 HGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLID 433
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 147/346 (42%), Gaps = 28/346 (8%)
Query: 200 LMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSV 259
L + HI P +I L RQ + A+ +FN ++E P+V S+I ++
Sbjct: 47 LHEDLHIAPK------LISALSLCRQTNLAVRVFNQVQE------PNVHLCNSLIRAHAQ 94
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
+ Q F+ M G+ +Y L+ A + ++ N I++ G DI
Sbjct: 95 NSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYV 154
Query: 320 YTSLLNAYGR--SQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
+L++ Y R + A +FE + + VS+N+++ G L DA ++ E
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDE 210
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
M Q +++S T+L RC + K + R NTV++++ + Y G+
Sbjct: 211 MPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGD 262
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
+ A ++ M + VT+TI+I+G + EA +++M+ L S
Sbjct: 263 MEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
IL A ++ G + +++K S + ++LD Y G +
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 139/306 (45%), Gaps = 24/306 (7%)
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
H D+ +I S+ Q FN + +P++ N+L+ A+A + +A
Sbjct: 48 HEDLHIAPKLISALSLCRQTNLAVRVFNQVQ----EPNVHLCNSLIRAHAQNSQPYQAFF 103
Query: 304 VFNEIKQNGFRPDIVSYTSLLNA-YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAY 362
VF+E+++ G D +Y LL A G+S P + + I++ L ++ NALID Y
Sbjct: 104 VFSEMQRFGLFADNFTYPFLLKACSGQSWLPV-VKMMHNHIEKLGLSSDIYVPNALIDCY 162
Query: 363 GSNGLLD--DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL 420
G L DA+K+ +M + + VS ++L + + + R
Sbjct: 163 SRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR---- 214
Query: 421 NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM 480
+ +++N+ + Y E KA L++ M ++ ++V+++ ++ G K A
Sbjct: 215 DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 481 EEMMHLKLPVSKEV-YSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
++M LP V ++ I+ Y+++G + EA+ + M +SG D S+L A T
Sbjct: 271 DKM---PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTE 327
Query: 540 AGKMNF 545
+G ++
Sbjct: 328 SGLLSL 333
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN- 311
I+ LY SG E+ F+ M + ++ S+NAL+ AY EA+ F E+ +
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
G PD+V+Y +++ A R +FE +++N +P+L+S+N L++ + L +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGS 431
+I M+ + PN+ S + + R + ++ + GI + YN+ I +
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 432 YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVS 491
Y ++ + Y M++K + D+VTY +LI CK A+ EE + KL
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
Query: 492 KEVYSSILCAYSKQGQIVEA 511
+Y ++ G+I EA
Sbjct: 368 PNMYKPVVERLMGAGKIDEA 387
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 7/265 (2%)
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDN-GVGP 173
+G +G A + D+M + ++N L++A +S EA+ K++ + G+ P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
DLVT+N ++ A LS FE ++ PD + N ++ + + + I+
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
+ M+ K P++ SY S + + + + + ++M EGI P + +YNAL+ AY
Sbjct: 252 DLMKSK--NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 294 AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL--KPN 351
+E + +NE+K+ G PD V+Y L+ + +A V E ++KL +PN
Sbjct: 310 VDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN 369
Query: 352 LVSYNALIDAYGSNGLLDDAIKILR 376
+ Y +++ G +D+A ++++
Sbjct: 370 M--YKPVVERLMGAGKIDEATQLVK 392
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 141/293 (48%), Gaps = 12/293 (4%)
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
E L KK D+ D V +LL + ++++ L F+ M + + N ++
Sbjct: 108 EVLQYQKKF-DDIKSEDFVIRIMLLYGYSGMAEHAHKL--FDEMPELNCERTVKSFNALL 164
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
V ++ D+A+ F + EK PD+V+Y ++I G +++ + F + G
Sbjct: 165 SAYVNSKKLDEAMKTFKELPEKLG-ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNG 223
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+P ++S+N L+ + + E +++ +K P+I SY S + R++K A
Sbjct: 224 FEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDAL 283
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+ +++K + P++ +YNALI AY + L++ +K EM++ G+ P+ V+ C L+
Sbjct: 284 NLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLL 343
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVA----YNSAIGSYLNVGEYDKALGLYK 446
C +KG ++ + ++ IK ++ Y + + G+ D+A L K
Sbjct: 344 --C-KKGDLDRAVEVSE-EAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE-GIKPSIVSYNALVG 290
+F+ M E C V S+ +++ Y S +++ F + + GI P +V+YN ++
Sbjct: 144 LFDEMPE--LNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIK 201
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
A G + L +F E+++NGF PD++S+ +LL + R + + +++++K L P
Sbjct: 202 ALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSP 261
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
N+ SYN+ + N DA+ ++ M+ +GI P+V + L+ A + ++
Sbjct: 262 NIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCY 321
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
+ + +G+ +TV Y I G+ D+A+ + + K K+
Sbjct: 322 NEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKP 350
Y GM + A +F+E+ + + S+ +LL+AY S+K +A F E+ ++ + P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
+LV+YN +I A G +DD + I E+E++G +P+++S TLL R + + +
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+ + + N +YNS + ++ AL L M+ + I D T
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHT----------- 300
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
Y++++ AY + E +N MK G +PD VTY
Sbjct: 301 ------------------------YNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 531 TSMLDAYTAAGKMN 544
++ G ++
Sbjct: 337 CMLIPLLCKKGDLD 350
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN MI+ R +D +F E+++ +PD ++N L+ R + I D M
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
+ P+ +YN+ + + + +ALN+ M G+ PD+ T+N L++A++ +
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+ + + MK + PDT T ++I L K D+A+++ + K P++ Y
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKP 373
Query: 253 IIHLYSVSGQIENC 266
++ +G+I+
Sbjct: 374 VVERLMGAGKIDEA 387
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 216/488 (44%), Gaps = 70/488 (14%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N ++ ++A++ ++ A +F EM E + ++N +I G+ + ++ + M
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPE----VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD 343
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
+ P+ T +++ AC SG+ + + + P + N +LS + + Y +
Sbjct: 344 SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----PSVSAWNAMLSGYSNYEHYEE 399
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
A+S F M+ +++PD TTL++++ +LR + I + + + +VS +
Sbjct: 400 AISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS--GL 457
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ--- 310
I +YS ++E E F+ + E I +N+++ + + + +AL++F + Q
Sbjct: 458 IAVYSECEKMEISECIFDDCINE---LDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 514
Query: 311 ---------------------------------NGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+G+ D T+L + Y + + AR
Sbjct: 515 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR 574
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
F+ + L+ N V +N +I YG NG D+A+ + R+M G +P+ ++ ++L A
Sbjct: 575 QFFDAV----LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTA- 629
Query: 398 GRCSQKGKIET---VLSAAQ-MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
CS G +ET +LS+ Q + GI+ Y + G + A L ++
Sbjct: 630 --CSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEA---TPY 684
Query: 454 KADSVTYTILISGSCKMSKYGE---ALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
K+ SV + IL+S SC++ +G+ A E++M L P S Y + YS Q +
Sbjct: 685 KSSSVLWEILLS-SCRV--HGDVSLARRVAEKLMRLD-PQSSAAYVLLSNTYSSLRQWDD 740
Query: 511 AESTFNLM 518
+ + LM
Sbjct: 741 SAALQGLM 748
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 219/507 (43%), Gaps = 55/507 (10%)
Query: 48 GSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAET 107
G + H +V MK+ C N ++ L+ D AR +F EM D +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLC------NRLLDLYIECGDGDYARKVFDEMS----VRDVYS 74
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS--TYNNLINACGSSGNWKEALNVCKK 165
+NA + + G A + D M P R ++NN+I+ G ++AL V K+
Sbjct: 75 WNAFLTFRCKVGDLGEACEVFDGM------PERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQ 225
M +G P T +LSA SK L M+ + T + L
Sbjct: 129 MVCDGFLPSRFTLASVLSA------CSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSM 182
Query: 226 YDKAIDIFN-SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK-PSIV 283
Y K I + +R +S P+ VSYT++I + ++ F +M +G++ S+
Sbjct: 183 YAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVC 242
Query: 284 SYNALVGAYAAHGMGKEALLVFNEIKQN--------GFRPDIVSYTSLLNAYGRSQKPQK 335
N L + G + + NE+ + GF D+ SLL Y +++
Sbjct: 243 LSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNG 302
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
A E+I + N+VS+N +I +G D +++ L M G QPN V+ ++L
Sbjct: 303 A----ELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 396 ACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKK 452
AC R G +ET + S+ + A+N+ + Y N Y++A+ ++ M+ +
Sbjct: 359 ACFR---SGDVETGRRIFSSIPQPSVS----AWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 453 IKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK--EVYSSILCAYSKQGQIVE 510
+K D T ++++S SC ++ E + ++ ++ +SK + S ++ YS+ ++
Sbjct: 412 LKPDKTTLSVILS-SCARLRFLEGGKQIHGVV-IRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 511 AESTFNLMKSSGCSPDVVTYTSMLDAY 537
+E F+ + D+ + SM+ +
Sbjct: 470 SECIFDDCIN---ELDIACWNSMISGF 493
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 171/390 (43%), Gaps = 29/390 (7%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N M+ ++ + ++A F +MQ KPD T + ++++ R I ++
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP-DLVTHNILLSAFKSGSQY 191
R I + + LI E + + + + D+ + D+ N ++S F+
Sbjct: 444 RTEISKNSHIVSGLIAVYSEC----EKMEISECIFDDCINELDIACWNSMISGFRHNMLD 499
Query: 192 SKALSYFELMKGTHIR-PDTTTLNIVIHCLVKL------RQYDKAIDIFNSMREKKSECH 244
+KAL F M T + P+ T+ V+ +L RQ+ + KS
Sbjct: 500 TKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV--------VKSGYV 551
Query: 245 PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV 304
D T++ +Y G+I++ F+ +L + + V +N ++ Y +G G EA+ +
Sbjct: 552 SDSFVETALTDMYCKCGEIDSARQFFDAVL----RKNTVIWNEMIHGYGHNGRGDEAVGL 607
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR-NKLKPNLVSYNALIDAYG 363
+ ++ +G +PD +++ S+L A S + + ++R + ++P L Y ++D G
Sbjct: 608 YRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
G L+DA K+ E + + V LL++C R + ++ MR ++
Sbjct: 668 RAGRLEDAEKL---AEATPYKSSSVLWEILLSSC-RVHGDVSLARRVAEKLMRLDPQSSA 723
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
AY +Y ++ ++D + L M K ++
Sbjct: 724 AYVLLSNTYSSLRQWDDSAALQGLMNKNRV 753
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 158/363 (43%), Gaps = 27/363 (7%)
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
P+ N +I Y I I+ + K E PD ++ + + G +
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFEL-PDRFTFPFMFKSCASLGSCYLGK 129
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
+ G + +V+ NAL+ Y +A VF+E+ + D++S+ SLL+ Y
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM----YERDVISWNSLLSGY 185
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
R + +KA+G+F ++ L +VS+ A+I Y G +A+ REM+ GI+P+
Sbjct: 186 ARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE 241
Query: 388 VSICTLLAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
+S+ ++L + C+Q G +E + A+ RG T N+ I Y G +A+ L
Sbjct: 242 ISLISVLPS---CAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ M K D ++++ +ISG A+ EM K+ + + +L A S
Sbjct: 299 FGQMEGK----DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH 354
Query: 505 QGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKMNFE-------PLKYEDGFWK 556
G E F++M+ P + Y ++D AGK+ P+K + W
Sbjct: 355 VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWG 414
Query: 557 CML 559
+L
Sbjct: 415 SLL 417
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 115/255 (45%), Gaps = 16/255 (6%)
Query: 45 TQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPD 104
Q GS+E + + + +R + + + N +I ++++ I QA LF +M+ D
Sbjct: 252 AQLGSLELGKWIHLYAE-RRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME----GKD 306
Query: 105 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCK 164
+++ +I+ + G A+ ++M RA + P+ T+ L++AC G W+E L
Sbjct: 307 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 366
Query: 165 KM-TDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 223
M D + P + + L+ + +A+ E+ K ++PD+ ++
Sbjct: 367 MMRQDYQIEPKIEHYGCLIDVLARAGKLERAV---EITKTMPMKPDSKIWGSLLSSCRTP 423
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP--- 280
D A+ + + E + E D+ +Y + ++Y+ G+ E+ M+ E +K
Sbjct: 424 GNLDVALVAMDHLVELEPE---DMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480
Query: 281 -SIVSYNALVGAYAA 294
S++ N +V + +
Sbjct: 481 GSLIEVNNIVQEFVS 495
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 209/520 (40%), Gaps = 56/520 (10%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEM--QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
YN++IR++ R A +F M + +C PD TY + A G + + +
Sbjct: 83 YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGR 142
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
+LR+ + N L+ + G + A +V M + D+++ N ++S +
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR----DVISWNTMISGYYRNGY 198
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIV---------------IHCLVKLRQYDKAIDIFNS 235
+ AL F+ M + D T+ + +H LV+ ++ I++ N+
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 236 MREKKSEC--------------HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
+ +C DV+++T +I+ Y+ G +EN +M EG++P+
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
V+ +LV + + + DI+ TSL++ Y + ++ VF
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLL---AACG 398
+ P ++A+I N L+ DA+ + + M ++ ++PN+ ++ +LL AA
Sbjct: 379 GASKYHTGP----WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
Q I L+ G + A + Y G + A ++ +++K D V
Sbjct: 435 DLRQAMNIHCYLTKT---GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
+ LISG AL EM+ + ++ ++S L A S G + E + F M
Sbjct: 492 LWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFM 551
Query: 519 ----------KSSGCSPDVVTYTSMLD-AYTAAGKMNFEP 547
C D++ LD AY + FEP
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 163/357 (45%), Gaps = 14/357 (3%)
Query: 55 LVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINA 114
++F WM N+ I +M+ + ++ R + ++E R E NAL+N
Sbjct: 204 MMFDWMVNESVDLDHATIVSML-PVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 115 HGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD 174
+ + G+ A + D M R + T+ +IN G+ + AL +C+ M GV P+
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVI----TWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
VT L+S + + + + G +R + I+ L+ + K +D+
Sbjct: 319 AVTIASLVSVCGDALKVNDG----KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
+ S+ H +++II + + + F M E ++P+I + N+L+ AYAA
Sbjct: 375 RVFSGASKYHTG--PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
++A+ + + + GF + + T L++ Y + + A +F I+ ++V
Sbjct: 433 LADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVL 492
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
+ ALI YG +G +A+++ EM + G+ PN ++ + L A CS G +E L+
Sbjct: 493 WGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA---CSHSGLVEEGLT 546
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 200/461 (43%), Gaps = 26/461 (5%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIP--PSRSTY 143
I AR LF EM + +YN +I + R G + A+++ M+ + P TY
Sbjct: 65 ITYARKLFEEMPQ----SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTY 120
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
+ A G + K L V ++ + G D N LL+ + + + A F++MK
Sbjct: 121 PFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKN 180
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI 263
D + N +I + + A+ +F+ M + + + + +I+ + V G +
Sbjct: 181 R----DVISWNTMISGYYRNGYMNDALMMFDWMVNESVD-----LDHATIVSMLPVCGHL 231
Query: 264 ENCEAAFN---MMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY 320
++ E N ++ + + I NALV Y G EA VF+ ++ R D++++
Sbjct: 232 KDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME----RRDVITW 287
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
T ++N Y + A + +++ ++PN V+ +L+ G ++D + +
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
+ +++ +L++ +C + V S A K +T +++ I +
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS----KYHTGPWSAIIAGCVQNELVSD 403
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
ALGL+K MR++ ++ + T L+ ++ +A++ + S + + ++
Sbjct: 404 ALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVH 463
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
YSK G + A FN ++ S DVV + +++ Y G
Sbjct: 464 VYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 166/352 (47%), Gaps = 33/352 (9%)
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
AI +F M + P+ ++ S++ + +G+I+ + + L G + L
Sbjct: 111 AITLFYEMMSDEF-VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNL 169
Query: 289 VGAYAAHGMGKEALLVF-------------NEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
V Y G K+A ++F + K++G +IV + +++ Y R +
Sbjct: 170 VRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG---EIVLWNVMIDGYMRLGDCKA 226
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
AR +F+ +++ ++VS+N +I Y NG DA+++ REM++ I+PN V++ ++L
Sbjct: 227 ARMLFDKMRQR----SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLP 282
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
A R E + A+ GI+++ V ++ I Y G +KA+ +++ + ++ +
Sbjct: 283 AISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV-- 340
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF 515
+T++ +I+G + G+A+ +M + S Y ++L A S G + E F
Sbjct: 341 --ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 516 NLMKS-SGCSPDVVTYTSMLDAYTAAGKMNFE-------PLKYEDGFWKCML 559
+ M S G P + Y M+D +G ++ P+K +D WK +L
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 208/480 (43%), Gaps = 49/480 (10%)
Query: 66 YCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR--W 123
+CA +D++ H +D A +F +M + C ++N +I + + +
Sbjct: 64 FCATSDLH---------HRDLDYAHKIFNQMPQRNCF----SWNTIIRGFSESDEDKALI 110
Query: 124 AMNIMDDMLRAA-IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPD-LVTHNIL 181
A+ + +M+ + P+R T+ +++ AC +G +E + G G D V N++
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLV 170
Query: 182 LSAFKSGSQYSKALSYFE--------LMKGTHIRPDTTTL-NIVIHCLVKLRQYDKAIDI 232
G + +++ +M R L N++I ++L A +
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
F+ MR++ VVS+ ++I YS++G ++ F M I+P+ V+ +++ A
Sbjct: 231 FDKMRQRS------VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAI 284
Query: 293 AAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNL 352
+ G + + + +G R D V ++L++ Y + +KA VFE + R N+
Sbjct: 285 SRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE----NV 340
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC--GRCSQKGKIETVL 410
++++A+I+ + +G DAI +M Q G++P+ V+ LL AC G ++G+
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR-RYFS 399
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+ G++ Y + G D+A +M IK D V + L+ G+C+M
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALL-GACRM 455
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF------NLMKSSGCS 524
E + ++ +P Y ++ Y+ QG E ++ K GCS
Sbjct: 456 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 181/413 (43%), Gaps = 26/413 (6%)
Query: 48 GSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAET 107
GS+E +FQ + + N C + MI + + +A GLF EM + PD T
Sbjct: 499 GSLEESYKLFQGIPFKDNAC-----WASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 167
A++ I LRA I + L+N G+ K A V ++
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 168 DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYD 227
+ D V+ + L+S + F M + D+ ++ ++ +
Sbjct: 614 E----LDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 228 KAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
+ + + P V S S++ +YS G I++C AF+ + P ++++ A
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGS--SLLTMYSKFGSIDDCCKAFSQING----PDLIAWTA 723
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR-GVFEMIKRN 346
L+ +YA HG EAL V+N +K+ GF+PD V++ +L+A +++ + M+K
Sbjct: 724 LIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDY 783
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
++P Y ++DA G +G L +A + M I+P+ + TLLAA C G++
Sbjct: 784 GIEPENRHYVCMVDALGRSGRLREAESFINNMH---IKPDALVWGTLLAA---CKIHGEV 837
Query: 407 ETVLSAAQMRGIKL---NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
E AA+ + I+L + AY S VGE+D+ K M+ ++ +
Sbjct: 838 ELGKVAAK-KAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 144/342 (42%), Gaps = 48/342 (14%)
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
DV S++ YS SG + + F+ + +P +VS N ++ Y H + +E+L F
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTI----PQPDVVSCNIMISGYKQHRLFEESLRFF 138
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY----NALIDA 361
+++ GF + +SY S+++A Q P + E++ + +K Y +ALID
Sbjct: 139 SKMHFLGFEANEISYGSVISACSALQAPLFS----ELVCCHTIKMGYFFYEVVESALIDV 194
Query: 362 YGSNGLLDDAIKILR-------------------------------EMEQDGIQPNVVSI 390
+ N +DA K+ R EM +P+ +
Sbjct: 195 FSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTY 254
Query: 391 CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
++LAAC +K + V+ A ++ + + + Y G +A+ ++ +
Sbjct: 255 SSVLAACASL-EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
+ V++T+++SG K + AL +EM H + ++ +S++ A + + E
Sbjct: 314 PSV----VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 511 AESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
A + SG D +++ Y+ +G ++ +ED
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 112/568 (19%), Positives = 213/568 (37%), Gaps = 86/568 (15%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
LI ++ E VF+ + YC +N +I R+ LF EM
Sbjct: 191 LIDVFSKNLRFEDAYKVFRDSLSANVYC-----WNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
KPD+ TY++++ A + R+ + +++ +++ G+ EA
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEA 304
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ V ++ + P +V+ ++LS + + AL F+ M+ + + + T+ VI
Sbjct: 305 MEVFSRIPN----PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAA---------- 269
+ +A + + KS + D ++I +YS SG I+ E
Sbjct: 361 CGRPSMVCEASQVHAWVF--KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQ 418
Query: 270 ----------------------FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNE 307
F ML EG++ S +L+ +GK+ V
Sbjct: 419 NIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQ---VHGY 475
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
++G D+ +SL Y + +++ +F+ I K N + ++I + G
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGI---PFKDN-ACWASMISGFNEYGY 531
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAAC-------------GRCSQKG---------- 404
L +AI + EM DG P+ ++ +L C G + G
Sbjct: 532 LREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSA 591
Query: 405 ------KIETVLSAAQM--RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
K ++ A Q+ R +L+ V+ +S I Y G L++ M D
Sbjct: 592 LVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMD 651
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFN 516
S + ++ + + + + L V SS+L YSK G I + F+
Sbjct: 652 SFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFS 711
Query: 517 LMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ PD++ +T+++ +Y GK N
Sbjct: 712 QIN----GPDLIAWTALIASYAQHGKAN 735
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/543 (18%), Positives = 197/543 (36%), Gaps = 123/543 (22%)
Query: 67 CARNDIY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWA 124
C D++ ++ L+A+ + +A +F + P ++ +++ + ++ A
Sbjct: 280 CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP----NPSVVSWTVMLSGYTKSNDAFSA 335
Query: 125 MNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSA 184
+ I +M + + + T ++I+ACG EA V + +G D L+S
Sbjct: 336 LEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISM 395
Query: 185 FKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK----- 239
+ + FE + + +N++I + ++ KAI +F M ++
Sbjct: 396 YSKSGDIDLSEQVFEDLDDIQRQ---NIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTD 452
Query: 240 -------------------------KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMML 274
KS D+ +S+ LYS G +E F
Sbjct: 453 EFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLF---- 508
Query: 275 AEGIK-PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD----------------- 316
+GI + +++ + +G +EA+ +F+E+ +G PD
Sbjct: 509 -QGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 317 -----IVSYT-------------SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNAL 358
I YT +L+N Y + + AR V++ + +L P VS ++L
Sbjct: 568 PRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP--ELDP--VSCSSL 623
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
I Y +GL+ D + R+M G + +I ++L A + V + G+
Sbjct: 624 ISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGL 683
Query: 419 KLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALS 478
+S + Y G D + + D + +T LI+
Sbjct: 684 CTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP----DLIAWTALIA------------- 726
Query: 479 FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
+Y++ G+ EA +NLMK G PD VT+ +L A +
Sbjct: 727 ----------------------SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 539 AAG 541
G
Sbjct: 765 HGG 767
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/484 (20%), Positives = 200/484 (41%), Gaps = 73/484 (15%)
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
+ALI+ + ++ A + D L A + +N +I + N+ ++ +M
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANV----YCWNTIIAGALRNQNYGAVFDLFHEMCV 244
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR---PDTTTLNIVIHCLVKLRQ 225
PD T++ +L+A S + L + ++++ I+ D ++ K
Sbjct: 245 GFQKPDSYTYSSVLAACASLEK----LRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGH 300
Query: 226 YDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY 285
+A+++F+ + +P VVS+T ++ Y+ S + F M G++ + +
Sbjct: 301 MAEAMEVFSRIP------NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR 345
+++ A M EA V + ++GF D +L++ Y +S + VFE +
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGK 405
+ + N+V N +I ++ + AI++ M Q+G++ + S+C+LL+ C GK
Sbjct: 415 IQ-RQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL-DCLNLGK 470
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
V G+ L+ +S Y G +++ L++ + K D+ + +IS
Sbjct: 471 --QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK----DNACWASMIS 524
Query: 466 GSCKMSKYGEALSFMEEMM--------------------HLKLPVSKEVY---------- 495
G + EA+ EM+ H LP KE++
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 496 -----SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKY 550
S+++ YSK G + A ++ + D V+ +S++ Y+ G +
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLP----ELDPVSCSSLISGYSQHGLI------- 633
Query: 551 EDGF 554
+DGF
Sbjct: 634 QDGF 637
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/466 (18%), Positives = 182/466 (39%), Gaps = 62/466 (13%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
+PD + N +I+ + + + ++ M + +Y ++I+AC + +
Sbjct: 112 QPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSEL 171
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
VC G V + L+ F ++ A F + + N +I +
Sbjct: 172 VCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR----DSLSANVYCWNTIIAGAL 227
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPS 281
+ + Y D+F+ M + PD +Y+S++ + ++ + ++ G +
Sbjct: 228 RNQNYGAVFDLFHEMCVGFQK--PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV 285
Query: 282 IVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE 341
V A+V YA G EA+ VF+ I P +VS+T +L+ Y +S
Sbjct: 286 FVC-TAIVDLYAKCGHMAEAMEVFSRIPN----PSVVSWTVMLSGYTKSN---------- 330
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS 401
DA+ A++I +EM G++ N ++ ++++ACGR S
Sbjct: 331 ------------------DAF-------SALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 402 QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYT 461
+ V + G L++ + I Y G+ D + +++ + I+ ++
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL--DDIQRQNIV-N 422
Query: 462 ILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYS--KQGQIVEAESTFNLMK 519
++I+ + K G+A+ M+ L + S+L G+ V +
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTL----- 477
Query: 520 SSGCSPDVVTYTSMLDAYTAAGKMN-----FEPLKYED-GFWKCML 559
SG D+ +S+ Y+ G + F+ + ++D W M+
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMI 523
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 156/345 (45%), Gaps = 10/345 (2%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
YN +++ G ++E V +M+ + T+ +LL+ + + + +A+ FE K
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
I D + ++ L + + + A +F S R E D+ + I++ + V G
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRR---EFGCDIKAMNMILNGWCVLGN 262
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
+ + + ++A +P +VSY ++ A G +A+ ++ + PD+ +
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 323 LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
+++A ++ +A VF I PN+V+YN+L+ + +++ EME G
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 383 --IQPNVVSICTLLAACGRCSQKGK-IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
PN V+ LL + SQ+ K ++ VL ++ + YN Y+ + +
Sbjct: 383 GSCSPNDVTFSYLL----KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEE 438
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
K ++ M + + D TYTI I G K GEALS+ +EMM
Sbjct: 439 KVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMM 483
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 168/385 (43%), Gaps = 16/385 (4%)
Query: 172 GPDLVTHNILLSAFKSGSQYSKA--LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 229
G DL +L ++ S + A LS + + H+ + N ++ L K+R++++
Sbjct: 104 GIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHL-SSSMLYNEILDVLGKMRRFEEF 162
Query: 230 IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALV 289
+F+ M K + + +Y +++ Y+ + +++ F GI +V+++ L+
Sbjct: 163 HQVFDEM--SKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLL 220
Query: 290 GAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLK 349
+ + A +F ++ F DI + +LN + +A+ ++ I +K +
Sbjct: 221 MWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCR 279
Query: 350 PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSIC--TLLAACGRCSQKGKIE 407
P++VSY +I+A G L A+++ R M P+V IC + A C + +E
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDV-KICNNVIDALCFKKRIPEALE 338
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK--KIKADSVTYTILIS 465
V +G N V YNS + + +K L + M K + VT++ L+
Sbjct: 339 -VFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK 397
Query: 466 GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
S + + +E M K ++ ++Y+ + Y + + + ++ M+ SG P
Sbjct: 398 YS---QRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 526 DVVTYTSMLDAYTAAGKMNFEPLKY 550
D TYT + GK+ E L Y
Sbjct: 455 DQRTYTIRIHGLHTKGKIG-EALSY 478
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 9/234 (3%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 145
+ +A+ + ++ +C+PD +Y +INA + G+ AM + M P NN
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELM--KG 203
+I+A EAL V +++++ G P++VT+N LL + K E M KG
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDI-FNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
P+ T + L+K Q K +DI M + K E D+ Y + LY +
Sbjct: 383 GSCSPNDVTFSY----LLKYSQRSKDVDIVLERMAKNKCEMTSDL--YNLMFRLYVQWDK 436
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD 316
E ++ M G+ P +Y + G EAL F E+ G P+
Sbjct: 437 EEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 144/350 (41%), Gaps = 41/350 (11%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG---------QWR 122
+YN ++ + + R ++ +F EM + + +TY L+N + A + R
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 123 WAMNIMDDML-------------------------RAAIPPSRSTYNNLINACGSSGNWK 157
I DD++ R N ++N GN
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
EA K + + PD+V++ +++A + KA+ + M T PD N VI
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII-HLYSVSGQIENCEAAFNMMLAE 276
L ++ +A+++F + EK + P+VV+Y S++ HL + + E M L
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPD--PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 277 G-IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQK 335
G P+ V+++ L+ Y+ K+ +V + +N Y + Y + K +K
Sbjct: 383 GSCSPNDVTFSYLL-KYSQR--SKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 336 ARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
R ++ ++R+ L P+ +Y I + G + +A+ +EM G+ P
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 224/506 (44%), Gaps = 71/506 (14%)
Query: 83 HNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRST 142
+ ++++A L MQE R D + + AL+ R +W+ A + A+ S
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALV----RLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 143 YNNLINACGSS----GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALS-Y 197
L NA + GN +A V KM++ +L + N+L+ + + +A+ Y
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSER----NLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 198 FELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY 257
++ ++PD T V+ + + ++ + E DVV+ ++I +Y
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN--ALITMY 241
Query: 258 SVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDI 317
G +++ F+ M + I+S+NA++ Y +GM E L +F ++ PD+
Sbjct: 242 VKCGDVKSARLLFDRM----PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 318 VSYTSLLNA-----------------------------------YGRSQKPQKARGVFEM 342
++ TS+++A Y + ++A +F
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
++R ++VS+ +I Y N L D AI R M+QD ++P+ +++ +L+A C+
Sbjct: 358 MERK----DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSA---CAT 410
Query: 403 KGKIETVLSAAQMRGIKLNTVAY----NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
G ++T + ++ IK ++Y N+ I Y DKAL ++ ++ +K + +
Sbjct: 411 LGDLDTGVELHKL-AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV----I 465
Query: 459 TYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
++T +I+G ++ EAL F+ + M + L + ++ L A ++ G ++ + +
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFLRQ-MKMTLQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 519 KSSGCSPDVVTYTSMLDAYTAAGKMN 544
+G D ++LD Y G+MN
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMN 550
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/524 (19%), Positives = 202/524 (38%), Gaps = 64/524 (12%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQ 97
LI + G ++ L+F M R DI +N MI + + + LFF M+
Sbjct: 237 LITMYVKCGDVKSARLLFDRM-------PRRDIISWNAMISGYFENGMCHEGLELFFAMR 289
Query: 98 EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 157
PD T ++I+A G R +I ++ S N+L ++G+W+
Sbjct: 290 GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWR 349
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
EA + +M D+V+ ++S ++ KA+ + +M ++PD T+ V+
Sbjct: 350 EAEKLFSRMERK----DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
L D +++ K+ V+ ++I++YS I+ F+ +
Sbjct: 406 SACATLGDLDTGVELHK--LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI---- 459
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIK---------------------------- 309
+ +++S+ +++ + EAL+ ++K
Sbjct: 460 PRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKE 519
Query: 310 ------QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+ G D +LL+ Y R + A F N K ++ S+N L+ Y
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-----NSQKKDVTSWNILLTGYS 574
Query: 364 SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV 423
G +++ M + ++P+ ++ +LL C + + S + G+ N
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLK 634
Query: 424 AYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
Y + GE +A +K ++K + D + L++ +C++ + L +
Sbjct: 635 HYACVVDLLGRAGELQEA---HKFIQKMPVTPDPAVWGALLN-ACRI-HHKIDLGELSAQ 689
Query: 484 MHLKLPVSKEVYSSILC-AYSKQGQIVEAESTFNLMKSSGCSPD 526
+L Y +LC Y+ G+ E +MK +G + D
Sbjct: 690 HIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 191/444 (43%), Gaps = 32/444 (7%)
Query: 69 RNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMN 126
R DI + MI + + D+A + M + KPD T A+++A G +
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 127 IMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFK 186
+ ++A + NNLIN +AL++ + V ++ +++ +
Sbjct: 420 LHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNV----ISWTSIIAGLR 475
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
++ +AL + MK T ++P+ TL + ++ +I + ++ D
Sbjct: 476 LNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVL--RTGVGLD 532
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
+++ +Y G++ + FN K + S+N L+ Y+ G G + +F+
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNSQ-----KKDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNG 366
+ ++ RPD +++ SLL +SQ ++ F ++ + PNL Y ++D G G
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAG 647
Query: 367 LLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYN 426
L +A K +++M + P+ LL AC R K + LSA + + +V Y
Sbjct: 648 ELQEAHKFIQKMP---VTPDPAVWGALLNAC-RIHHKIDLGE-LSAQHIFELDKKSVGYY 702
Query: 427 SAIGS-YLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFM-EEMM 484
+ + Y + G++ + + + M++ + D +G + G+ +F+ ++
Sbjct: 703 ILLCNLYADCGKWREVAKVRRMMKENGLTVD--------AGCSWVEVKGKVHAFLSDDKY 754
Query: 485 HLKLPVSKEVYSSILCAYSKQGQI 508
H P +KE+ + + Y K ++
Sbjct: 755 H---PQTKEINTVLEGFYEKMSEV 775
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 175/388 (45%), Gaps = 65/388 (16%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N ++ + +D+AR LF EM+E + E++N +I+ + AG + A + D M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEE----RNVESWNFMISGYAAAGLVKEAKEVFDSM- 263
Query: 133 RAAIPPSRS--TYNNLINACGSSGNWKEALNVCKKMTDNGV-GPDLVTHNILLSAFKSGS 189
P R ++N ++ A G + E L V KM D+ PD T +LSA S
Sbjct: 264 -----PVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLG 318
Query: 190 QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
S+ + H+ D + I +
Sbjct: 319 SLSQG-------EWVHVYIDKHGIEI------------------------------EGFL 341
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
T+++ +YS G+I+ F K + ++N+++ + HG+GK+AL +F+E+
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRAT----SKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKR-NKLKPNLVSYNALIDAYGSNGLL 368
GF+P+ +++ +L+A +AR +FEM+ +++P + Y ++D G G +
Sbjct: 398 YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKI 457
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLN---TVAY 425
++A +++ E+ D + + +LL AC R Q + E + + R ++LN + Y
Sbjct: 458 EEAEELVNEIPADEAS---ILLESLLGACKRFGQLEQAERIAN----RLLELNLRDSSGY 510
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKKKI 453
Y + G ++K + ++MR +++
Sbjct: 511 AQMSNLYASDGRWEKVIDGRRNMRAERV 538
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 204/454 (44%), Gaps = 48/454 (10%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
P+ T+N++I A+ + A+ + +ML + P + ++ ++ AC + ++E +
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 163 CKKMTDNGVGPDLVTHNILLSAF-KSGSQYSKALSYFELMKGTHIR---PDTTTLNIVIH 218
+G+ D+ N L++ + +SG YFE+ + R D + N ++
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSG--------YFEIARKVLDRMPVRDAVSWNSLLS 214
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
++ D+A +F+ M E+ E S+ +I Y+ +G ++ + F+ M
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVE------SWNFMISGYAAAGLVKEAKEVFDSMPVR-- 266
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF-RPDIVSYTSLLNAYGRSQKPQKAR 337
+VS+NA+V AYA G E L VFN++ + +PD + S+L+A +
Sbjct: 267 --DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
V I ++ ++ AL+D Y G +D A+++ R + + SI + L+
Sbjct: 325 WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVS-TWNSIISDLSVH 383
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK-KIKAD 456
G K +E + S G K N + + + + +VG D+A L++ M +++
Sbjct: 384 GL--GKDALE-IFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPT 440
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE--VYSSILCAYSKQGQIVEAEST 514
Y ++ +M K EA EE+++ ++P + + S+L A + GQ+ +AE
Sbjct: 441 IEHYGCMVDLLGRMGKIEEA----EELVN-EIPADEASILLESLLGACKRFGQLEQAERI 495
Query: 515 ------FNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
NL SSG Y M + Y + G+
Sbjct: 496 ANRLLELNLRDSSG-------YAQMSNLYASDGR 522
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 50/267 (18%)
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
P+ ++N+++ AYA + AL VF E+ PD S+T +L A ++ R +
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGR 399
+ ++ L ++ N L++ YG +G + A K+L M
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR------------------ 204
Query: 400 CSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVT 459
+ V++NS + +YL G D+A L+ M ++ ++ +
Sbjct: 205 ---------------------DAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----S 239
Query: 460 YTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV-YSSILCAYSKQGQIVEAESTFN-L 517
+ +ISG EA + M PV V +++++ AY+ G E FN +
Sbjct: 240 WNFMISGYAAAGLVKEAKEVFDSM-----PVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Query: 518 MKSSGCSPDVVTYTSMLDAYTAAGKMN 544
+ S PD T S+L A + G ++
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLS 321
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 168/388 (43%), Gaps = 13/388 (3%)
Query: 139 SRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI---LLSAFKSGSQYSKAL 195
S Y+ ++ G + W ++M G LVT N ++ F ++ +A+
Sbjct: 120 SSDAYDMAVDILGKAKKWDRMKEFVERMR----GDKLVTLNTVAKIMRRFAGAGEWEEAV 175
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
F+ + + +T ++N+++ L K ++ ++A + + KS P+ ++ IH
Sbjct: 176 GIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL---KSHITPNAHTFNIFIH 232
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
+ + ++E M G +P ++SY ++ Y + + +E++ NG P
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
+ ++YT+++++ ++ ++A V +KR+ KP+ + YN LI G L++A ++
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 376 R-EMEQDGIQPNVVSICTLLAA-CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
R EM + G+ N + +++A C + IE + + Y + S
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 434 NVGEYDKALGLYKSM-RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ + L K M K + D TYT LI C+ + A EEM+ +
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRH 472
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKS 520
+L K+ AE ++MK+
Sbjct: 473 RTCLLLLEEVKKKNMHESAERIEHIMKT 500
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
+A G +EA+ +F+ + + G + S LL+ + ++ ++AR V +K + + PN
Sbjct: 165 FAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPN 223
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
++N I + +++A+ ++EM+ G +P V+S T++ + + K+ +LS
Sbjct: 224 AHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLS 283
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
+ G N++ Y + + S E+++AL + M++ K DS+ Y LI +
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 472 KYGEALS-FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG-CSPDVVT 529
+ EA F EM L + ++ Y+S++ Y + +A M+SS C+PDV T
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 530 YTSML 534
Y +L
Sbjct: 404 YQPLL 408
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 135/324 (41%), Gaps = 41/324 (12%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+++ + R++QAR + +++ P+A T+N I+ +A + A+ + +M
Sbjct: 194 NLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG 252
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
P +Y +I + + + +M NG P+ +T+ ++S+ + ++ +
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
AL MK + +PD+ N +IH L +
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNCLIHTLAR------------------------------- 341
Query: 254 IHLYSVSGQIENCEAAFNMMLAE-GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+G++E E F + + E G+ + +YN+++ Y H +A+ + E++ +
Sbjct: 342 ------AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 313 F-RPDIVSYTSLLNA-YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
PD+ +Y LL + + R + + + EM+ ++ L + +Y LI + +
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEW 455
Query: 371 AIKILREMEQDGIQPNVVSICTLL 394
A + EM I P + LL
Sbjct: 456 AYCLFEEMISQDITPRHRTCLLLL 479
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 149/351 (42%), Gaps = 10/351 (2%)
Query: 4 TVSEVAEQVLSLTLYDDIDGLLNRWVGRFA----RKNFPFLIKELTQRGSIEHCNLVFQW 59
TV+++ + +++ G+ +R +G F ++ L+ L + +E +V
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDR-LGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ 215
Query: 60 MKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG 119
+K+ A +N+ I + NR+++A EM+ +P +Y +I + +
Sbjct: 216 LKSHITPNAHT--FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
++ ++ +M PP+ TY ++++ + ++EAL V +M +G PD + +N
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 180 ILLSAFKSGSQYSKALSYFEL-MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
L+ + +A F + M + +T+T N +I + DKAI++ M E
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM-E 392
Query: 239 KKSECHPDVVSYTSIIH-LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGM 297
+ C+PDV +Y ++ + +E + M+ + +Y L+ M
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 298 GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+ A +F E+ P + LL + + A + ++K KL
Sbjct: 453 CEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKL 503
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 102/226 (45%), Gaps = 4/226 (1%)
Query: 319 SYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+Y ++ G+++K + + E ++ +KL L + ++ + G ++A+ I +
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG-IKLNTVAYNSAIGSYLNVGE 437
+ G++ N S+ LL C +K + + Q++ I N +N I +
Sbjct: 182 GEFGLEKNTESMNLLLDTL--CKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANR 239
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
++AL + M+ + ++YT +I C+ ++ + + EM P + Y++
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
I+ + + Q + EA MK SGC PD + Y ++ AG++
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 168/388 (43%), Gaps = 13/388 (3%)
Query: 139 SRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI---LLSAFKSGSQYSKAL 195
S Y+ ++ G + W ++M G LVT N ++ F ++ +A+
Sbjct: 120 SSDAYDMAVDILGKAKKWDRMKEFVERMR----GDKLVTLNTVAKIMRRFAGAGEWEEAV 175
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
F+ + + +T ++N+++ L K ++ ++A + + KS P+ ++ IH
Sbjct: 176 GIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL---KSHITPNAHTFNIFIH 232
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP 315
+ + ++E M G +P ++SY ++ Y + + +E++ NG P
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 316 DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKIL 375
+ ++YT+++++ ++ ++A V +KR+ KP+ + YN LI G L++A ++
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 376 R-EMEQDGIQPNVVSICTLLAA-CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL 433
R EM + G+ N + +++A C + IE + + Y + S
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 434 NVGEYDKALGLYKSM-RKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSK 492
G+ + L K M K + D TYT LI C+ + A EEM+ +
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRH 472
Query: 493 EVYSSILCAYSKQGQIVEAESTFNLMKS 520
+L K+ AE ++MK+
Sbjct: 473 RTCLLLLEEVKKKNMHESAERIEHIMKT 500
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
+A G +EA+ +F+ + + G + S LL+ + ++ ++AR V +K + + PN
Sbjct: 165 FAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPN 223
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
++N I + +++A+ ++EM+ G +P V+S T++ + + K+ +LS
Sbjct: 224 AHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLS 283
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
+ G N++ Y + + S E+++AL + M++ K DS+ Y LI +
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 472 KYGEALS-FMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG-CSPDVVT 529
+ EA F EM L + ++ Y+S++ Y + +A M+SS C+PDV T
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 530 YTSML 534
Y +L
Sbjct: 404 YQPLL 408
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 135/324 (41%), Gaps = 41/324 (12%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N+++ + R++QAR + +++ P+A T+N I+ +A + A+ + +M
Sbjct: 194 NLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG 252
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
P +Y +I + + + +M NG P+ +T+ ++S+ + ++ +
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
AL MK + +PD+ N +IH L +
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNCLIHTLAR------------------------------- 341
Query: 254 IHLYSVSGQIENCEAAFNMMLAE-GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+G++E E F + + E G+ + +YN+++ Y H +A+ + E++ +
Sbjct: 342 ------AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 313 F-RPDIVSYTSLLNA-YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
PD+ +Y LL + + R + + + EM+ ++ L + +Y LI + +
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEW 455
Query: 371 AIKILREMEQDGIQPNVVSICTLL 394
A + EM I P + LL
Sbjct: 456 AYCLFEEMISQDITPRHRTCLLLL 479
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 149/351 (42%), Gaps = 10/351 (2%)
Query: 4 TVSEVAEQVLSLTLYDDIDGLLNRWVGRFA----RKNFPFLIKELTQRGSIEHCNLVFQW 59
TV+++ + +++ G+ +R +G F ++ L+ L + +E +V
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDR-LGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ 215
Query: 60 MKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG 119
+K+ A +N+ I + NR+++A EM+ +P +Y +I + +
Sbjct: 216 LKSHITPNAHT--FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
++ ++ +M PP+ TY ++++ + ++EAL V +M +G PD + +N
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 180 ILLSAFKSGSQYSKALSYFEL-MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
L+ + +A F + M + +T+T N +I + DKAI++ M E
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM-E 392
Query: 239 KKSECHPDVVSYTSIIH-LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGM 297
+ C+PDV +Y ++ + +E + M+ + +Y L+ M
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 298 GKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+ A +F E+ P + LL + + A + ++K KL
Sbjct: 453 CEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKL 503
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 102/226 (45%), Gaps = 4/226 (1%)
Query: 319 SYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
+Y ++ G+++K + + E ++ +KL L + ++ + G ++A+ I +
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 379 EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG-IKLNTVAYNSAIGSYLNVGE 437
+ G++ N S+ LL C +K + + Q++ I N +N I +
Sbjct: 182 GEFGLEKNTESMNLLLDTL--CKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANR 239
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
++AL + M+ + ++YT +I C+ ++ + + EM P + Y++
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
I+ + + Q + EA MK SGC PD + Y ++ AG++
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 186/384 (48%), Gaps = 24/384 (6%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+ N +I ++ R ++D AR LF M E DA ++NA+IN + + A ++D M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSE----RDAVSWNAIINCYTSEEKLGEAFKLLDRM 276
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + S T+N + C +GN+ ALN M + V V +++ K+ S
Sbjct: 277 YLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA---MINGLKACSHI 333
Query: 192 SKALSYFELMKGTHIRPDTTTLNI--VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
AL + ++ IR + + +I V + L+ + Y + D+ ++ + + +
Sbjct: 334 G-ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM--YSRCSDLRHAFIVFQQVEANSLST 390
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG---MGKEALLVFN 306
+ SII ++ + + E ML G P+ ++ +++ +A G GKE
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI- 449
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE-MIKRNKLKPNLVSYNALIDAYGSN 365
+++ ++ ++ + SL++ Y +S + A+ VF+ M KR+K V+Y +LID YG
Sbjct: 450 -LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK-----VTYTSLIDGYGRL 503
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ-MRGIKLNTVA 424
G + A+ ++M++ GI+P+ V++ +L+AC + + + + + + GI+L
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH 563
Query: 425 YNSAIGSYLNVGEYDKALGLYKSM 448
Y+ + Y G DKA ++ ++
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTI 587
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 42/284 (14%)
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
+H +L + S S S + + E + G + HC+ ++D +
Sbjct: 78 SHEFVL--YSSASLLSTCVGFNEFVPGQQLHA---------HCISSGLEFDSVLV----- 121
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQI-ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAH 295
P +V++ S +L + I EN +E + P + +N L+G+Y +
Sbjct: 122 --------PKLVTFYSAFNLLDEAQTITEN---------SEILHP--LPWNVLIGSYIRN 162
Query: 296 GMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY 355
+E++ V+ + G R D +Y S++ A R V I+ + + NL
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 356 NALIDAYGSNGLLDDAIKILREM-EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
NALI Y G +D A ++ M E+D + N + C + G+ +L
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE-----EKLGEAFKLLDRMY 277
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ G++ + V +N+ G L G Y AL MR ++ SV
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 186/384 (48%), Gaps = 24/384 (6%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+ N +I ++ R ++D AR LF M E DA ++NA+IN + + A ++D M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSE----RDAVSWNAIINCYTSEEKLGEAFKLLDRM 276
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + S T+N + C +GN+ ALN M + V V +++ K+ S
Sbjct: 277 YLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA---MINGLKACSHI 333
Query: 192 SKALSYFELMKGTHIRPDTTTLNI--VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
AL + ++ IR + + +I V + L+ + Y + D+ ++ + + +
Sbjct: 334 G-ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM--YSRCSDLRHAFIVFQQVEANSLST 390
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG---MGKEALLVFN 306
+ SII ++ + + E ML G P+ ++ +++ +A G GKE
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI- 449
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFE-MIKRNKLKPNLVSYNALIDAYGSN 365
+++ ++ ++ + SL++ Y +S + A+ VF+ M KR+K V+Y +LID YG
Sbjct: 450 -LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK-----VTYTSLIDGYGRL 503
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ-MRGIKLNTVA 424
G + A+ ++M++ GI+P+ V++ +L+AC + + + + + + GI+L
Sbjct: 504 GKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH 563
Query: 425 YNSAIGSYLNVGEYDKALGLYKSM 448
Y+ + Y G DKA ++ ++
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTI 587
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 42/284 (14%)
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
+H +L + S S S + + E + G + HC+ ++D +
Sbjct: 78 SHEFVL--YSSASLLSTCVGFNEFVPGQQLHA---------HCISSGLEFDSVLV----- 121
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQI-ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAH 295
P +V++ S +L + I EN +E + P + +N L+G+Y +
Sbjct: 122 --------PKLVTFYSAFNLLDEAQTITEN---------SEILHP--LPWNVLIGSYIRN 162
Query: 296 GMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSY 355
+E++ V+ + G R D +Y S++ A R V I+ + + NL
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 356 NALIDAYGSNGLLDDAIKILREM-EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
NALI Y G +D A ++ M E+D + N + C + G+ +L
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE-----EKLGEAFKLLDRMY 277
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ G++ + V +N+ G L G Y AL MR ++ SV
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 185/412 (44%), Gaps = 23/412 (5%)
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+E + +M G+ D LS F S S L Y +++ RPDT N++
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLS-FCISSTSSDFLPYAQIVFDGFDRPDTFLWNLM 86
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAE 276
I + ++++ ++ M S + ++ S++ S E +
Sbjct: 87 IRGFSCSDEPERSLLLYQRML--CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 277 GIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKA 336
G + + + N+L+ +YA G K A L+F+ I + PD VS+ S++ Y ++ K A
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIA 200
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
+F R + N +S+ +I Y + +A+++ EM+ ++P+ VS+ L+A
Sbjct: 201 LTLF----RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 397 CGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
C + + + + S I++++V I Y GE ++AL ++K+++KK ++A
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA- 315
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTF- 515
+T LISG EA+S EM + + + ++++L A S G + E + F
Sbjct: 316 ---WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAGKMNFE-------PLKYEDGFWKCMLE 560
++ + P + Y ++D AG ++ PLK W +L+
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 155/329 (47%), Gaps = 23/329 (6%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIY--NMMIRLHARHNRIDQARGLF 93
FP L+K + + E + + + Y ND+Y N +I +A A LF
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQI-TKLGY--ENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 94 FEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 153
+ E PD ++N++I + +AG+ M+I + R + ++ +I+ +
Sbjct: 174 DRIPE----PDDVSWNSVIKGYVKAGK----MDIALTLFRKMAEKNAISWTTMISGYVQA 225
Query: 154 GNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
KEAL + +M ++ V PD V+ LSA + + T IR D+
Sbjct: 226 DMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLG 285
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
++I K + ++A+++F ++++K V ++T++I Y+ G + F M
Sbjct: 286 CVLIDMYAKCGEMEEALEVFKNIKKK------SVQAWTALISGYAYHGHGREAISKFMEM 339
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN-GFRPDIVSYTSLLNAYGRSQK 332
GIKP+++++ A++ A + G+ +E L+F ++++ +P I Y +++ GR+
Sbjct: 340 QKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGL 399
Query: 333 PQKARGVFEMIKRNKLKPNLVSYNALIDA 361
+A+ I+ LKPN V + AL+ A
Sbjct: 400 LDEAK---RFIQEMPLKPNAVIWGALLKA 425
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 159/358 (44%), Gaps = 58/358 (16%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
M+ + + RI AR LF M E + T+ A+I+ + +AG + + M +
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTE----RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
Query: 136 -IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKA 194
+ + +T + AC ++E + ++ + DL N L+S + +A
Sbjct: 270 DVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 195 LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII 254
+ F +MK D+ + N +I LV+ +Q +A ++F M K D+VS+T +I
Sbjct: 330 KAVFGVMK----NKDSVSWNSLITGLVQRKQISEAYELFEKMPGK------DMVSWTDMI 379
Query: 255 HLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR 314
+S G+I C F MM + +++ A++ A+ ++G +EAL F+++ Q
Sbjct: 380 KGFSGKGEISKCVELFGMM----PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 315 PDIVSYTSLLNA-------------YGRSQK----------------------PQKARGV 339
P+ +++S+L+A +GR K A +
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
F I +PN+VSYN +I Y NG A+K+ +E G +PN V+ LL+AC
Sbjct: 496 FSCIS----EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC 549
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/480 (19%), Positives = 208/480 (43%), Gaps = 52/480 (10%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
N I HAR+ + +A +F +M ++ A+I+A+ G+ A + D+M
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSN----RSIVSWIAMISAYAENGKMSKAWQVFDEM-- 107
Query: 134 AAIPPSRST--YNNLI-----NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFK 186
P R T YN +I N C ++ ++ +K + V++ +++ F
Sbjct: 108 ----PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEK--------NAVSYATMITGFV 155
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
++ +A + R D+ N+++ ++ ++++A+ +F M K +
Sbjct: 156 RAGRFDEA-EFLYAETPVKFR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAVK------E 207
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
VVS +S++H Y G+I + + F+ M + +++++ A++ Y G ++ +F
Sbjct: 208 VVSCSSMVHGYCKMGRIVDARSLFDRM----TERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 307 EIKQNG-FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
++Q G + + + + A + ++ + ++ R L+ +L N+L+ Y
Sbjct: 264 RMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKL 323
Query: 366 GLLDDAIKILREME-QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVA 424
G + +A + M+ +D + N S+ T L + S+ ++ + M V+
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWN--SLITGLVQRKQISEAYELFEKMPGKDM-------VS 374
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
+ I + GE K + L+ M +K D++T+T +IS Y EAL + +M+
Sbjct: 375 WTDMIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKML 430
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
++ + +SS+L A + ++E + D+ S++ Y G N
Sbjct: 431 QKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTN 490
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 198/492 (40%), Gaps = 86/492 (17%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQ-EWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
Y MI R R D+A L+ E ++R D+ N L++ + RAG+W A+ + M
Sbjct: 147 YATMITGFVRAGRFDEAEFLYAETPVKFR---DSVASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ S +++ G +A ++ +MT+ V +T ++ + +
Sbjct: 204 AVKEVVSCSS----MVHGYCKMGRIVDARSLFDRMTERNV----ITWTAMIDGYFKAGFF 255
Query: 192 SKALSYFELMKGT-HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
F M+ ++ ++ TL ++ +Y + I + E D+
Sbjct: 256 EDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEF--DLFLG 313
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
S++ +YS G + +A F +M + VS+N+L+ EA +F ++
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
D+VS+T ++ + + K +F M+ K N +++ A+I A+ SNG ++
Sbjct: 370 K----DMVSWTDMIKGFSGKGEISKCVELFGMMPE---KDN-ITWTAMISAFVSNGYYEE 421
Query: 371 AIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG--IKLNTV----A 424
A+ +M Q + PN + ++L+A + ++ Q+ G +K+N V
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSA------TASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
NS + Y G + A ++ + + I V+Y +ISG
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNI----VSYNTMISG------------------ 513
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMN 544
YS G +A F++++SSG P+ VT+ ++L A G
Sbjct: 514 -----------------YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG--- 553
Query: 545 FEPLKYEDGFWK 556
Y D WK
Sbjct: 554 -----YVDLGWK 560
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 111/257 (43%), Gaps = 15/257 (5%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
+IK + +G I C +F M + N + MI + ++A F +M +
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNI-----TWTAMISAFVSNGYYEEALCWFHKMLQK 432
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
P++ T++++++A + I +++ I S N+L++ GN +A
Sbjct: 433 EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ +++ P++V++N ++S + KAL F +++ + P+ T ++
Sbjct: 493 YKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Query: 220 LVKLRQYDKAIDIFNSMREKKS-ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
V + D F SM+ + E PD Y ++ L SG +++ A N++
Sbjct: 549 CVHVGYVDLGWKYFKSMKSSYNIEPGPD--HYACMVDLLGRSGLLDD---ASNLISTMPC 603
Query: 279 KPSIVSYNALVGAYAAH 295
KP + +L+ A H
Sbjct: 604 KPHSGVWGSLLSASKTH 620
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 118/553 (21%), Positives = 225/553 (40%), Gaps = 93/553 (16%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
FPF+ K + S+ C + + + + N ++ +++R + AR +F E
Sbjct: 129 TFPFVFKACGEISSVR-CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDE 187
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRA-AIPPSRSTYNNLINACGSSG 154
M W D ++N++I ++ + G+ + A+ + M P T N++ C S G
Sbjct: 188 MSVW----DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 155 NWKEALNV-CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
+ C +T + ++ N L+ + +A + F M D +
Sbjct: 244 THSLGKQLHCFAVTSEMI-QNMFVGNCLVDMYAKCGMMDEANTVFSNMS----VKDVVSW 298
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
N ++ ++ +++ A+ +F M+E+K + DVV++++ I Y+ G M
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKM--DVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 274 LAEGIKPSIVSYNALVGAYAAHGM---GKE----ALLVFNEIKQNGFRPDIVSYTSLLNA 326
L+ GIKP+ V+ +++ A+ G GKE A+ ++++NG + + L++
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 327 YGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ-- 384
Y + +K AR +F+ + + ++V++ +I Y +G + A+++L EM ++ Q
Sbjct: 417 YAKCKKVDTARAMFDSLSPKE--RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 385 PNVVSICTLLAACGRCS--QKGK-IETVLSAAQMRGIKL--------------------- 420
PN +I L AC + + GK I Q + L
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 421 --------NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK 472
N V + S + Y G ++ALG++ MR+ K D VT +
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV---------- 584
Query: 473 YGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS-GCSPDVVTYT 531
+L A S G I + FN MK+ G SP Y
Sbjct: 585 -------------------------VLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYA 619
Query: 532 SMLDAYTAAGKMN 544
++D AG++N
Sbjct: 620 CLVDLLGRAGRLN 632
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 204/479 (42%), Gaps = 80/479 (16%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N M+ +++ R + A LF +MQE + K D T++A I+ + + G A+ + ML
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 133 RAAIPPSRSTYNNLINACGSSG---NWKE----ALNVCKKMTDNGVGPDLVTHNILLSAF 185
+ I P+ T ++++ C S G + KE A+ + NG G + + N L+ +
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
+ A + F+ + D T ++I + +KA+++ + M E+ + P
Sbjct: 418 AKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 246 DVVSYTS------------------------------------IIHLYSVSGQIENCEAA 269
+ + + +I +Y+ G I +
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 270 FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
F+ M+A+ + V++ +L+ Y HG G+EAL +F+E+++ GF+ D V+ +L A
Sbjct: 536 FDNMMAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSH 591
Query: 330 SQKPQKARGVFEMIKR-NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
S + F +K + P Y L+D G G L+ A++++ EM + P VV
Sbjct: 592 SGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME--PPPVV 649
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYL-------NVGEYDKA 441
+ L +C C GK+E AA+ K+ +A N GSY N G +
Sbjct: 650 WVAFL--SC--CRIHGKVELGEYAAE----KITELASNHD-GSYTLLSNLYANAGRWKDV 700
Query: 442 LGLYKSMRKKKIKA-DSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
+ MR K +K ++ I G+ F+ + H P +KE+Y +L
Sbjct: 701 TRIRSLMRHKGVKKRPGCSWVEGIKGTTTF--------FVGDKTH---PHAKEIYQVLL 748
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 202/470 (42%), Gaps = 41/470 (8%)
Query: 104 DAETY--NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACG--SSGNWKEA 159
DA Y N+LI ++G G + + M + P T+ + ACG SS E+
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ +T G ++ N L++ + S A F+ M D + N +I
Sbjct: 149 AHALSLVT--GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW----DVVSWNSIIES 202
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH------LYSVSGQIENCEAAFNMM 273
KL + A+++F+ M + C PD ++ +++ +S+ Q+ +C A + M
Sbjct: 203 YAKLGKPKVALEMFSRMTNEFG-CRPDNITLVNVLPPCASLGTHSLGKQL-HCFAVTSEM 260
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+ ++ N LV YA GM EA VF+ + D+VS+ +++ Y + +
Sbjct: 261 IQ-----NMFVGNCLVDMYAKCGMMDEANTVFSNMSVK----DVVSWNAMVAGYSQIGRF 311
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
+ A +FE ++ K+K ++V+++A I Y GL +A+ + R+M GI+PN V++ ++
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371
Query: 394 LAACGRCSQKGKIETVLSAAQMRGIKL-------NTVAYNSAIGSYLNVGEYDKALGLYK 446
L+ C + + A I L + N I Y + D A ++
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS----ILCAY 502
S+ K + D VT+T++I G + +AL + EM ++ + CA
Sbjct: 432 SLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 503 SKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYED 552
+I + + L P V+ ++D Y G ++ L +++
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDN 538
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 190/430 (44%), Gaps = 22/430 (5%)
Query: 69 RNDIYNMMIRLHARHNRIDQARGLFFEMQEW-RCKPDAETYNALINAHGRAGQWRWAMNI 127
R D++N +++L R N +++A L+ + C+P T N ++ A R ++ + +
Sbjct: 95 RLDLHNHILKL-IRENDLEEA-ALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQL 152
Query: 128 MDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG-VGPDLVTHNILLSAFK 186
+ +A I P+ TYN + A + AL K DN + P + T IL+
Sbjct: 153 HGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLV 212
Query: 187 SGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
S KA+ E M D + ++ VK D + ++ ++EK D
Sbjct: 213 SNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDD 272
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEG--IKPSIVSYNALVGAYAAHGMGKEALLV 304
V Y ++ Y + + + + E ++ S ++YN ++ A + +G EAL +
Sbjct: 273 GVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKL 332
Query: 305 FNEIKQNGFRP-----DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
F+ +K+ P ++ ++ ++N Y K ++A VF + K P+ +S+N L+
Sbjct: 333 FDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLM 392
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR--- 416
+ N LL +A K+ EME+ ++P+ + L+ C + +GKI+ AA +
Sbjct: 393 NQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFK---EGKIDE--GAAYYKTMV 447
Query: 417 --GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
++ N YN + G+ D A + M K+K D Y ++ + +
Sbjct: 448 ESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLD 506
Query: 475 EALSFMEEMM 484
E L ++EM+
Sbjct: 507 EMLKIVDEML 516
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 180/422 (42%), Gaps = 58/422 (13%)
Query: 138 PSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSY 197
P+ T N ++ A + L + + G+ P+++T+N++ A+ + AL +
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 198 FEL-MKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHL 256
++L + + P T I++ LV +KA++I M K P V SY +
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM--- 244
Query: 257 YSVSGQIENCEAAFNMMLAEGIKPSI-------VSYNALVGAYAAHGMGKEALLVFNEI- 308
G ++N +A + L + +K + V Y L+ Y M KEA+ + E
Sbjct: 245 ----GCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAV 300
Query: 309 -KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP-----NLVSYNALIDAY 362
+ + R ++Y +L A + K +A +F+ +K+ P NL ++N +++ Y
Sbjct: 301 GENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGY 360
Query: 363 GSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
+ G ++A+++ R+M P+ +S L+ N
Sbjct: 361 CAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLM--------------------------NQ 394
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEE 482
+ N + +A LY M +K +K D TY +L+ K K E ++ +
Sbjct: 395 LCDNELLA---------EAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKT 445
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
M+ L + VY+ + K G++ +A+S F++M S D Y ++ A + AG+
Sbjct: 446 MVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGR 504
Query: 543 MN 544
++
Sbjct: 505 LD 506
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 176 VTHNILLSAFKSGSQYSKALSYFELMKGTHIRP-----DTTTLNIVIHCLVKLRQYDKAI 230
+ +N +L A ++ +AL F+ +K H P + T N++++ ++++A+
Sbjct: 311 MAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAM 370
Query: 231 DIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVG 290
++F M + K C PD +S+ ++++ + + E + M + +KP +Y L+
Sbjct: 371 EVFRQMGDFK--CSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 291 AYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP 350
G E + + ++ RP++ Y L + ++ K A+ F+M+ +KLK
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMM-VSKLKM 487
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+ +Y ++ A G LD+ +KI+ EM D
Sbjct: 488 DDEAYKFIMRALSEAGRLDEMLKIVDEMLDD 518
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 157/325 (48%), Gaps = 57/325 (17%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
+I ++++ R +AR +F M++ ++ T+N +I+ + R+GQ A + D M
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMED----KNSVTWNTMIDGYMRSGQVDNAAKMFDKM---- 166
Query: 136 IPPSRS--TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSK 193
P R ++ +IN G +EAL ++M +GV PD V +++A + +
Sbjct: 167 --PERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA---IIAALNACTNLG- 220
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
ALS+ + +H V + + + + NS+
Sbjct: 221 ALSF----------------GLWVHRYVLSQDFKNNVRVSNSL----------------- 247
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGF 313
I LY G +E F M K ++VS+N+++ +AA+G E+L+ F ++++ GF
Sbjct: 248 IDLYCRCGCVEFARQVFYNME----KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGF 303
Query: 314 RPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAYGSNGLLDDAI 372
+PD V++T L A ++ F+++K + ++ P + Y L+D Y G L+DA+
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDAL 363
Query: 373 KILREMEQDGIQPNVVSICTLLAAC 397
K+++ M ++PN V I +LLAAC
Sbjct: 364 KLVQSMP---MKPNEVVIGSLLAAC 385
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 170/391 (43%), Gaps = 37/391 (9%)
Query: 107 TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN----- 161
++ + IN R G+ A DM A + P+ T+ L++ CG + EAL
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 162 -VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCL 220
CK D ++ ++ + ++ KA F+ M+ ++ T N +I
Sbjct: 98 YACKLGLDRN---HVMVGTAIIGMYSKRGRFKKARLVFDYMED----KNSVTWNTMIDGY 150
Query: 221 VKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
++ Q D A +F+ M E+ D++S+T++I+ + G E F M G+KP
Sbjct: 151 MRSGQVDNAAKMFDKMPER------DLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
V+ A + A G L V + F+ ++ SL++ Y R + AR VF
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 341 EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRC 400
N K +VS+N++I + +NG +++ R+M++ G +P+ V+ L A C
Sbjct: 265 ----YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTA---C 317
Query: 401 SQKGKIETVLSAAQMRG----IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKAD 456
S G +E L Q+ I Y + Y G + AL L +SM +K +
Sbjct: 318 SHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---PMKPN 374
Query: 457 SVTYTILISGSCKMSKYGEALSFMEEMM-HL 486
V L++ +C S +G + E +M HL
Sbjct: 375 EVVIGSLLA-AC--SNHGNNIVLAERLMKHL 402
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 147/338 (43%), Gaps = 57/338 (16%)
Query: 248 VSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY---------------------- 285
VS+TS I+L + +G++ F+ M G++P+ +++
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 286 ----------------NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
A++G Y+ G K+A LVF+ ++ + V++ ++++ Y R
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK----NSVTWNTMIDGYMR 152
Query: 330 SQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVS 389
S + A +F+ + +L+S+ A+I+ + G ++A+ REM+ G++P+ V+
Sbjct: 153 SGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 390 ICTLLAACGRCSQKGKIETVLSAAQM---RGIKLNTVAYNSAIGSYLNVGEYDKALGLYK 446
I +AA C+ G + L + + K N NS I Y G + A ++
Sbjct: 209 I---IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 447 SMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQG 506
+M K+ + V++ +I G E+L + +M ++ L A S G
Sbjct: 266 NMEKRTV----VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 507 QIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKM 543
+ E F +MK SP + Y ++D Y+ AG++
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRL 359
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 170/389 (43%), Gaps = 70/389 (17%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
+I ++RG + LVF +M+++ + +N MI + R ++D A +F +M E
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNSV-----TWNTMIDGYMRSGQVDNAAKMFDKMPE- 168
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
D ++ A+IN + G A+ +M + + P +NAC + G
Sbjct: 169 ---RDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG 225
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSA-FKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIH 218
L V H +LS FK+ + S +L I ++
Sbjct: 226 LWV---------------HRYVLSQDFKNNVRVSNSL-------------------IDLY 251
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
C ++ A +F +M EK++ VVS+ S+I ++ +G F M +G
Sbjct: 252 CRCGCVEF--ARQVFYNM-EKRT-----VVSWNSVIVGFAANGNAHESLVYFRKMQEKGF 303
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR--PDIVSYTSLLNAYGRSQKPQKA 336
KP V++ + A + G+ +E L F +I + +R P I Y L++ Y R+ + + A
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYF-QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDA 362
Query: 337 RGVFEMIKRNKLKPNLVSYNALIDA---YGSNGLLDDAIKILREMEQDGIQ--PNVVSIC 391
++++ +KPN V +L+ A +G+N +L A ++++ + ++ N V +
Sbjct: 363 ---LKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL--AERLMKHLTDLNVKSHSNYVILS 417
Query: 392 TLLAACGRCSQKGKIETVLSAAQMRGIKL 420
+ AA G+ K+ +M+G+ L
Sbjct: 418 NMYAADGKWEGASKMRR-----KMKGLGL 441
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 353 VSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI--ETVL 410
VS+ + I+ NG L +A K +M G++PN ++ LL+ CG + + + +
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 411 SAAQMRGIKLNTVAYNSA-IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCK 469
A G+ N V +A IG Y G + KA ++ M K +SVT+ +I G +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK----NSVTWNTMIDGYMR 152
Query: 470 MSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
+ A ++M L +++++ + K+G EA F M+ SG PD V
Sbjct: 153 SGQVDNAAKMFDKMPERDLI----SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 530 YTSMLDAYTAAGKMNF 545
+ L+A T G ++F
Sbjct: 209 IIAALNACTNLGALSF 224
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 3/209 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
YN ++ + +D +F EM KPDA ++ I+A+ AG A ++D M
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYS 192
R + P+ T+N++I + +A + +M G PD T+N +++ + +
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
+A M T PD T N+V+ L+++ ++D+A +I+ M E+K +P V +YT
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERK--FYPTVATYTV 423
Query: 253 IIH-LYSVSGQIENCEAAFNMMLAEGIKP 280
+IH L G++E F MM+ EGI P
Sbjct: 424 MIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 3/272 (1%)
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
E C A FN M+ GIKP + + L+ + A F + K G P +Y+ L
Sbjct: 156 EACRA-FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 324 LNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
+ + R + AR VF EM++RN + +L++YNAL+DA +G +D K+ +EM G
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVV-DLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
++P+ S + A VL + + N +N I + + D A
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAY 502
L M +K D+ TY +++ C + A + M K + Y+ +L
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 503 SKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ G+ A + M P V TYT M+
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 154/372 (41%), Gaps = 4/372 (1%)
Query: 175 LVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
L +++IL+ S Q++ + E + + + IV + +A F
Sbjct: 102 LESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAF 161
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
N M E + P V ++H + + + F GI PS +Y+ LV +A
Sbjct: 162 NRMVEFGIK--PCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWA 219
Query: 294 AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLV 353
A VF+E+ + D+++Y +LL+A +S +F+ + LKP+
Sbjct: 220 RIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAY 279
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAA 413
S+ I AY G + A K+L M++ + PNV + ++ + + +L
Sbjct: 280 SFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM 339
Query: 414 QMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
+G +T YNS + + + E ++A L M + K D TY +++ ++ ++
Sbjct: 340 IQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRF 399
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAY-SKQGQIVEAESTFNLMKSSGCSPDVVTYTS 532
A E M K + Y+ ++ K+G++ EA F +M G P T
Sbjct: 400 DRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEM 459
Query: 533 MLDAYTAAGKMN 544
+ + G+M+
Sbjct: 460 LRNRLVGWGQMD 471
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 3/266 (1%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 145
++ A+ F + + + P A+TY+ L+ R A + D+ML YN
Sbjct: 189 VNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNA 248
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
L++A SG+ + ++M + G+ PD + I + A+ A + MK
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYD 308
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
+ P+ T N +I L K + D A + + M +K + +PD +Y SI+ + ++
Sbjct: 309 LVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA--NPDTWTYNSIMAYHCDHCEVNR 366
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
+ M P +YN ++ G A ++ + + F P + +YT +++
Sbjct: 367 ATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Query: 326 AYGRSQ-KPQKARGVFEMIKRNKLKP 350
R + K ++A FEM+ + P
Sbjct: 427 GLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N +I+ ++ ++D A L EM + PD TYN+++ H + A ++ M
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQY 191
R P R TYN ++ G + A + + M++ P + T+ +++ + +
Sbjct: 376 RTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKL 435
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
+A YFE+M I P +TT+ ++ + LV Q D +D+ E+ S C
Sbjct: 436 EEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD-VVDVLAGKMERSSSC 486
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 230/544 (42%), Gaps = 89/544 (16%)
Query: 15 LTLYDDIDG---LLNRWVGRFARKNFP------FLIKELTQRGSIE-----HCNLVFQWM 60
L++Y I +L +V F + FP ++ + ++E HC+++ M
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI--KM 189
Query: 61 KNQRN-YCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG 119
+RN YC ++ ++A+ +RI AR +F EW P+ + L + + +AG
Sbjct: 190 GLERNSYCG-----GALVDMYAKCDRISDARRVF----EWIVDPNTVCWTCLFSGYVKAG 240
Query: 120 QWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHN 179
A+ + + M P + +IN G K+A + +M+ PD+V N
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWN 296
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
+++S + A+ YF M+ + ++ +TL V+ + + D + +
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV--HAEAI 354
Query: 240 KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGK 299
K ++ +S++ +YS + E EAA + A K + +NA++ YA +G
Sbjct: 355 KLGLASNIYVGSSLVSMYS---KCEKMEAAAKVFEALEEKNDVF-WNAMIRGYAHNGESH 410
Query: 300 EALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALI 359
+ + +F ++K +G+ D ++TSLL+ S + +I + KL NL NAL+
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 360 DAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIK 419
D Y G L+DA +I M C R
Sbjct: 471 DMYAKCGALEDARQIFERM------------------CDR-------------------- 492
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
+ V +N+ IGSY+ +A L+K M I +D ++ + K + L +
Sbjct: 493 -DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC----LASTLKACTHVHGL-Y 546
Query: 480 MEEMMH---LKLPVSKEVY--SSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
+ +H +K + ++++ SS++ YSK G I +A F SS VV+ +++
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF----SSLPEWSVVSMNALI 602
Query: 535 DAYT 538
Y+
Sbjct: 603 AGYS 606
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/583 (20%), Positives = 231/583 (39%), Gaps = 110/583 (18%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQ---RNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
L + G E LVF+ M+++ ++ A + N IRL ++ AR LF EM
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL----GKLKDARLLFGEM 287
Query: 97 QEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
PD +N +I+ HG+ G A+ +M ++++ +RST ++++A G N
Sbjct: 288 S----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
L V + G+ ++ + L+S + + A FE ++ + N +
Sbjct: 344 DLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE----EKNDVFWNAM 399
Query: 217 IHCLVKLRQYDKAIDIFNSMR------------------------EKKSECHPDVVSY-- 250
I + K +++F M+ E S+ H ++
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 251 -------TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
+++ +Y+ G +E+ F M V++N ++G+Y EA
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERM----CDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 304 VFNEIK-----------------------------------QNGFRPDIVSYTSLLNAYG 328
+F + + G D+ + +SL++ Y
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYS 575
Query: 329 RSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
+ + AR VF + + ++VS NALI Y N L ++A+ + +EM G+ P+ +
Sbjct: 576 KCGIIKDARKVFSSLP----EWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEI 630
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA--------IGSYLNVGEYDK 440
+ T++ AC K E++ Q G ++ ++S +G Y+N +
Sbjct: 631 TFATIVEACH------KPESLTLGTQFHG-QITKRGFSSEGEYLGISLLGMYMNSRGMTE 683
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A L+ + K V +T ++SG + Y EAL F +EM H + + + ++L
Sbjct: 684 ACALFSELSSPK---SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
S + E + +L+ D +T +++D Y G M
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 193/464 (41%), Gaps = 78/464 (16%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
+I ++++ I AR +F + EW + NALI + + A+ + +ML
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEW----SVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRG 624
Query: 136 IPPSRSTYNNLINAC---------------------------------GSSGNWKEALNV 162
+ PS T+ ++ AC G N +
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA 684
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
C ++ +V ++S Y +AL +++ M+ + PD T V+
Sbjct: 685 CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL----- 739
Query: 223 LRQYDKAIDIFNSMREKKSECHP---------DVVSYTSIIHLYSVSGQIENCEAAFNMM 273
+ + +S+RE ++ H D ++ ++I +Y+ G ++ F+ M
Sbjct: 740 -----RVCSVLSSLREGRA-IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+ ++VS+N+L+ YA +G ++AL +F+ ++Q+ PD +++ +L A + K
Sbjct: 794 RR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 334 QKARGVFE-MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICT 392
R +FE MI + ++ + ++D G G L +A + E ++P+ +
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI---EAQNLKPDARLWSS 907
Query: 393 LLAACGRCSQKGKIETVLSAAQMRGIK-LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK 451
LL AC I +SA ++ ++ N+ AY Y + G ++KA L K MR +
Sbjct: 908 LLGACR--IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 452 KIK---------ADSVTYTILISGSCKMSKYGEALSFMEEMMHL 486
+K + T+ I +G S+ G+ F+E++ L
Sbjct: 966 GVKKVPGYSWIDVEQRTH-IFAAGDKSHSEIGKIEMFLEDLYDL 1008
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 125/529 (23%), Positives = 213/529 (40%), Gaps = 110/529 (20%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
+I +A D +R L FE + PD+ Y LI + A+++ ++
Sbjct: 40 LIESYAFMGSPDSSR-LVFEAFPY---PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSET 95
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKK----MTDNGVGPDLVTHNILLSAFKSGSQY 191
S+ + +++ AC S +E L+V K + GV D V LL +
Sbjct: 96 TQISKFVFPSVLRACAGS---REHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNL 152
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
S A F+ G +R D+V+++
Sbjct: 153 SDAEKVFD---GMPVR--------------------------------------DLVAWS 171
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+++ +G++ F M+ +G++P V+ ++V A G + A V +I +
Sbjct: 172 TLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRK 231
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDA 371
F D SLL Y + + +FE I K N VS+ A+I +Y + A
Sbjct: 232 MFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA----KKNAVSWTAMISSYNRGEFSEKA 287
Query: 372 IKILREMEQDGIQPNVVSICTLLAACG--------------------------------- 398
++ EM + GI+PN+V++ ++L++CG
Sbjct: 288 LRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVE 347
Query: 399 ---RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
C + ETVL R N VA+NS I Y + G +ALGL++ M ++IK
Sbjct: 348 LYAECGKLSDCETVLRVVSDR----NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMH---LKLPVSKE-VYSSILCAYSKQGQIVEA 511
D+ T IS +C+ L + + +H ++ VS E V +S++ YSK G + A
Sbjct: 404 DAFTLASSIS-ACE----NAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSA 458
Query: 512 ESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEPLKYEDGFWKCMLE 560
+ FN +K VVT+ SML ++ G + E + D + LE
Sbjct: 459 STVFNQIKHR----SVVTWNSMLCGFSQNGN-SVEAISLFDYMYHSYLE 502
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 17/339 (5%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
L++ + G + C V + + + RN A +N +I L+A + QA GLF +M
Sbjct: 345 LVELYAECGKLSDCETVLRVVSD-RNIVA----WNSLISLYAHRGMVIQALGLFRQMVTQ 399
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
R KPDA T + I+A AG I ++R + N+LI+ SG+ A
Sbjct: 400 RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSA 458
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
V ++ V VT N +L F +A+S F+ M +++ + T VI
Sbjct: 459 STVFNQIKHRSV----VTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQA 514
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
+ +K + + + + D+ + T++I +Y+ G + E F M +
Sbjct: 515 CSSIGSLEKGKWVHHKLIISGLK---DLFTDTALIDMYAKCGDLNAAETVFRAMSSR--- 568
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
SIVS+++++ AY HG A+ FN++ ++G +P+ V + ++L+A G S ++ +
Sbjct: 569 -SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYY 627
Query: 340 FEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM 378
F ++K + PN + ID +G L +A + ++EM
Sbjct: 628 FNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEM 666
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/535 (20%), Positives = 228/535 (42%), Gaps = 63/535 (11%)
Query: 46 QRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDA 105
Q G++ VF M R+ A ++ ++ + + +A +F M + +PDA
Sbjct: 148 QTGNLSDAEKVFDGMP-VRDLVA----WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDA 202
Query: 106 ETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKK 165
T +++ G R A ++ + R + N+L+ G+ + + +K
Sbjct: 203 VTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEK 262
Query: 166 MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL-NIVIHC-LVKL 223
+ + V+ ++S++ G KAL F M + I P+ TL +++ C L+ L
Sbjct: 263 IAKK----NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 224 RQYDKAIDIFNSMREKKSECHPDVVSYT-SIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
+ K++ F RE P+ S + +++ LY+ G++ +CE ++ +I
Sbjct: 319 IREGKSVHGFAVRRE----LDPNYESLSLALVELYAECGKLSDCETVLRVVSDR----NI 370
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS-------------------- 322
V++N+L+ YA GM +AL +F ++ +PD + S
Sbjct: 371 VAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGH 430
Query: 323 --------------LLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
L++ Y +S A VF IK ++V++N+++ + NG
Sbjct: 431 VIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR----SVVTWNSMLCGFSQNGNS 486
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+AI + M ++ N V+ ++ AC K + V + G+K + +
Sbjct: 487 VEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTAL 545
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I Y G+ + A ++++M + V+++ +I+ + G A+S +M+
Sbjct: 546 IDMYAKCGDLNAAETVFRAMSSRS----IVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
++ V+ ++L A G + E + FNLMKS G SP+ + +D + +G +
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDL 656
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 16/327 (4%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW-AMNIMDDM 131
YN +I + ++++ A +F M+E D+ T L+ ++ W ++
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPL-CTVPEYLWLGRSLHGQC 182
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
++ + + N+ I G+ + + +M G L+T N ++S +
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG----LITWNAVISGYSQNGLA 238
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
L +E MK + + PD TL V+ L ++ + E P+V
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV-GKLVESNGFV-PNVFVSN 296
Query: 252 SIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQN 311
+ I +Y+ G + A F++M + S+VS+ A++G Y HGMG+ L++F+++ +
Sbjct: 297 ASISMYARCGNLAKARAVFDIMPVK----SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 312 GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAYGSNGLLDD 370
G RPD + +L+A S K +F +KR KL+P Y+ L+D G G LD+
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 412
Query: 371 AIKILREMEQDGIQPNVVSICTLLAAC 397
A++ + M ++P+ LL AC
Sbjct: 413 AMEFIESMP---VEPDGAVWGALLGAC 436
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 166/424 (39%), Gaps = 55/424 (12%)
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
N+ L S +S+++S + M + PD + ++ L + + +
Sbjct: 22 NVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTK 81
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVS--YNALVGAYAAHG 296
E P V+ T++I +Y G + + F E + S +S YNAL+ Y A+
Sbjct: 82 GGCETEPFVL--TALISMYCKCGLVADARKVFE----ENPQSSQLSVCYNALISGYTANS 135
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNA--------YGRSQKPQKARGVFE------- 341
+A +F +K+ G D V+ L+ GRS Q +G +
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 342 -----------------MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
+ +K L+++NA+I Y NGL D +++ +M+ G+
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
P+ ++ ++L++C K V + G N N++I Y G KA +
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGE-ALSFMEEMMHLKLPVSKEVYSSILCAYS 503
+ M K + V++T +I G M GE L ++M+ + V+ +L A S
Sbjct: 315 FDIMPVKSL----VSWTAMI-GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 504 KQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKMNFE-------PLKYEDGFW 555
G + F MK P Y+ ++D AG+++ P++ + W
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 556 KCML 559
+L
Sbjct: 430 GALL 433
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 123/296 (41%), Gaps = 44/296 (14%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+ N I ++ + ++ R LF EM T+NA+I+ + + G + + + M
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMP----VKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + P T +++++C G K V K + NG P++ N +S +
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 192 SKALSYFELMK--------------GTH-----------------IRPDTTTLNIVIHCL 220
+KA + F++M G H IRPD +V+
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 221 VKLRQYDKAIDIFNSM-REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
DK +++F +M RE K E P+ Y+ ++ L +G+++ A + + ++
Sbjct: 369 SHSGLTDKGLELFRAMKREYKLEPGPE--HYSCLVDLLGRAGRLDE---AMEFIESMPVE 423
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL-NAYGRSQKPQ 334
P + AL+GA H A L F ++ + F P+ + Y L+ N Y S+ +
Sbjct: 424 PDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQE 477
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 160/361 (44%), Gaps = 21/361 (5%)
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
R D N +++ K ++A +F M ++ D V++T++I YS + +
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR------DFVTWTTLISGYSQHDRPCD 144
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
FN ML G P+ + ++++ A AA G + + GF ++ ++LL+
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQP 385
Y R A+ VF+ ++ N VS+NALI + + A+++ + M +DG +P
Sbjct: 205 LYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP 260
Query: 386 NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLY 445
+ S +L AC + + V + G KL A N+ + Y G A ++
Sbjct: 261 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 320
Query: 446 KSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQ 505
+ K+ D V++ L++ + EA+ + EEM + + ++ + S+L A S
Sbjct: 321 DRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Query: 506 GQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFE-------PLKYEDGFWKCM 558
G + E + LMK G P+ Y +++D AG +N P++ WK +
Sbjct: 377 GLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL 436
Query: 559 L 559
L
Sbjct: 437 L 437
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 159/364 (43%), Gaps = 50/364 (13%)
Query: 69 RNDIY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMN 126
R+DI N ++ ++A+ +++AR +F +M + D T+ LI+ + + + A+
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ----RDFVTWTTLISGYSQHDRPCDALL 147
Query: 127 IMDDMLRAAIPPSRSTYNNLINA-------------------CGSSGNWKEALNVCKKMT 167
+ MLR P+ T +++I A CG N + T
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 168 DNGVGPDL------------VTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
G+ D V+ N L++ S KAL F+ M RP +
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT--SIIHLYSVSGQIENCEAAFNMM 273
+ ++ + M + + +V++ +++ +Y+ SG I + F+ +
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEK----LVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
K +VS+N+L+ AYA HG GKEA+ F E+++ G RP+ +S+ S+L A S
Sbjct: 324 ----AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
+ +E++K++ + P Y ++D G G L+ A++ + EM I+P L
Sbjct: 380 DEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKAL 436
Query: 394 LAAC 397
L AC
Sbjct: 437 LNAC 440
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 24/314 (7%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
++ L+ R+ +D A+ L F+ E R + ++NALI H R A+ + MLR
Sbjct: 202 LLDLYTRYGLMDDAQ-LVFDALESR---NDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQYSKA 194
PS +Y +L AC S+G ++ V M +G N LL + KSGS +
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 195 LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII 254
+ L K D + N ++ + +A+ F MR + P+ +S+ S++
Sbjct: 318 KIFDRLAK-----RDVVSWNSLLTAYAQHGFGKEAVWWFEEMR--RVGIRPNEISFLSVL 370
Query: 255 HLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR 314
S SG ++ + +M +GI P Y +V G AL E+
Sbjct: 371 TACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IE 427
Query: 315 PDIVSYTSLLNAYGRSQKPQ----KARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
P + +LLNA + + A VFE+ + P+++ YN Y S G +D
Sbjct: 428 PTAAIWKALLNACRMHKNTELGAYAAEHVFEL-DPDDPGPHVILYNI----YASGGRWND 482
Query: 371 AIKILREMEQDGIQ 384
A ++ ++M++ G++
Sbjct: 483 AARVRKKMKESGVK 496
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 43/290 (14%)
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK 344
YN L+ + + +V I Q+ FR DIV +LLN Y + ++AR VFE +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA-------- 396
+ + V++ LI Y + DA+ +M + G PN ++ +++ A
Sbjct: 123 QR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 397 --------CGRCSQKGKIET------------VLSAAQMRGIKL---NTVAYNSAIGSYL 433
C +C + ++ AQ+ L N V++N+ I +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 434 NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKE 493
+KAL L++ M + + +Y L G+C + + E ++ M +K
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLF-GACSSTGFLEQGKWVHAYM-IKSGEKLV 296
Query: 494 VYS--SILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAG 541
++ ++L Y+K G I +A F+ + DVV++ S+L AY G
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHG 342
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 146/350 (41%), Gaps = 16/350 (4%)
Query: 117 RAGQWRWAMNIMDDML----RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG 172
+ G+ R+ N++DD+L + P + + LI + ++ L+ KM +
Sbjct: 93 KLGRGRY-FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFT 151
Query: 173 PDLVTHNILLSAFKSGSQY-SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
P N +L S Y KA F+ + + P+T + N+++ A
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+F M E+ + PDV SY +I + GQ+ + ML +G P +SY L+ +
Sbjct: 212 LFGKMLER--DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNS 269
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
+EA + +K G PD+V Y +++ + R + AR V + + N PN
Sbjct: 270 LCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPN 329
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV-VSICTLLAACGRCSQKGKIET-- 408
VSY LI G+ D+ K L EM G P+ VS C + C GK+E
Sbjct: 330 SVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSF----GKVEEAC 385
Query: 409 -VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
V+ G L++ + I N E +K + K++I D+
Sbjct: 386 DVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 435
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 44 LTQRGSIEHCNLVFQWMKNQRNYCARNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRC 101
++ RG ++ F+ K+ R + + YN++++ ++ + A LF +M E
Sbjct: 165 VSHRGYLQK---AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV 221
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
PD ++Y LI R GQ AM ++DDML P R +Y L+N+ +EA
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYK 281
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
+ +M G PDLV +N ++ F C
Sbjct: 282 LLCRMKLKGCNPDLVHYNTMILGF---------------------------------C-- 306
Query: 222 KLRQYDKAIDIFNSMREKKSE-CHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP 280
+ D+A+D + + S C P+ VSY ++I G + + M+++G P
Sbjct: 307 ---REDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
N LV + + G +EA V + +NG
Sbjct: 364 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 1/274 (0%)
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAH-GMGKEALLVFNEI 308
+T +I +Y+ + E + F ML P N ++ +H G ++A +F
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
+ +G P+ SY L+ A+ + A +F + + P++ SY LI + G +
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+ A+++L +M G P+ +S TLL + R +Q + +L +++G + V YN+
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I + A + M +SV+Y LI G C + E ++EEM+
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSG 522
V + ++ + G++ EA ++ +G
Sbjct: 362 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 1/260 (0%)
Query: 285 YNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY-GRSQKPQKARGVFEMI 343
+ L+ YA + ++ L F ++ + F P +L+ QKA +F+
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 344 KRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQK 403
+ + + PN SYN L+ A+ N L A ++ +M + + P+V S L+ R Q
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 404 GKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTIL 463
+L +G + ++Y + + S + +A L M+ K D V Y +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 464 ISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGC 523
I G C+ + +A +++M+ + Y +++ QG E + M S G
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Query: 524 SPDVVTYTSMLDAYTAAGKM 543
SP ++ + + GK+
Sbjct: 362 SPHFSVSNCLVKGFCSFGKV 381
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 70/185 (37%)
Query: 63 QRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
+R+ D Y ++I+ R +++ A L +M PD +Y L+N+ R Q R
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 123 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILL 182
A ++ M P YN +I +A V M NG P+ V++ L+
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 183 SAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSE 242
+ + Y E M P + N ++ + ++A D+ + +
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Query: 243 CHPDV 247
H D
Sbjct: 398 LHSDT 402
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/524 (22%), Positives = 220/524 (41%), Gaps = 42/524 (8%)
Query: 17 LYDDIDGLLNRWVGRFARKN---FPFLIKELTQR-----GSIEHCNLVFQWMKNQRNYCA 68
L++++ R V + R + +P ++K + G + H ++ K+ C
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVC- 182
Query: 69 RNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIM 128
N +I ++ R + AR LF M E DA ++NA+IN + G W A +
Sbjct: 183 -----NALISMYKRFRNMGIARRLFDRMFE----RDAVSWNAVINCYASEGMWSEAFELF 233
Query: 129 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
D M + + S T+N + C +GN+ AL + +M + D V I L A
Sbjct: 234 DKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA---- 289
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
A+ + + G I ++ V + L+ + Y K D+ +++ + +
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITM--YSKCKDLRHALIVFRQTEENSLC 347
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP---SIVSYNALVGAYAAHGMGKEALLVF 305
++ SII Y+ + E ML G +P ++ S L A GKE
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
+++ F+ + + SL++ Y +S K A+ V +++ K + V+Y +LID YG+
Sbjct: 408 --LRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS----KRDEVTYTSLIDGYGNQ 461
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR-GIKLNTVA 424
G A+ + +EM + GI+P+ V++ +L+AC + E + Q GI+
Sbjct: 462 GEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH 521
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY--TILISGSCKMSKYGEALSFMEE 482
++ + Y G KA + +M K A T I G+ ++ K+ E+
Sbjct: 522 FSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAA-----EK 576
Query: 483 MMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
++ +K P + Y I Y+ G + +M+ G D
Sbjct: 577 LLEMK-PENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKD 619
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 174/458 (37%), Gaps = 92/458 (20%)
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
+N LI + + ++E + K+M G+ PD T+ +L A + ++
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
+ + N +I + R A +F+ M E+ D VS+ ++I+ Y+ G
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFER------DAVSWNAVINCYASEGM 225
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSY-- 320
F+ M G++ S++++N + G G AL + + ++ D V+
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 321 ---------------------------------TSLLNAYGRSQKPQKARGVFEMIKRNK 347
+L+ Y + + + A VF + N
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN- 344
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCS--QKGK 405
+L ++N++I Y ++A +LREM G QPN +++ ++L C R + Q GK
Sbjct: 345 ---SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 406 IETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILIS 465
E + + K T+ +NS + Y G+ A + M K+ D VTYT LI
Sbjct: 402 -EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR----DEVTYTSLID 456
Query: 466 GSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP 525
G Y QG+ A + F M SG P
Sbjct: 457 G-----------------------------------YGNQGEGGVALALFKEMTRSGIKP 481
Query: 526 DVVTYTSMLDAYTAA-----GKMNFEPLKYEDGFWKCM 558
D VT ++L A + + G+ F ++ E G C+
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCL 519
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 31/296 (10%)
Query: 175 LVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTT--TLNIVIHCLVKLRQYDKAIDI 232
L +H L AFK+ S L + + D + ++ V +R + + +
Sbjct: 13 LASHGHLHDAFKT-------FSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQV 65
Query: 233 ----FNSMREKKSECHPDVVSYTSIIHLYS-VSGQIENCEAAFNMMLAEGIKPSIVSYNA 287
+S E S P +V++ S +L++ IEN + + P + +N
Sbjct: 66 HAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI---------LHP--LPWNV 114
Query: 288 LVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
L+ +YA + + +E + + + G RPD +Y S+L A G + R V I+ +
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKIL-REMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
K +L NALI Y + A ++ R E+D + N V C A+ G S+ ++
Sbjct: 175 YKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINC--YASEGMWSEAFEL 232
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
G++++ + +N G L G Y ALGL MR D V I
Sbjct: 233 ---FDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/506 (21%), Positives = 220/506 (43%), Gaps = 71/506 (14%)
Query: 67 CARNDI--YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWA 124
C +DI +N+ I + R R ++A +F M W + +YN +I+ + R G++ A
Sbjct: 59 CGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELA 114
Query: 125 MNIMDDMLRA-------------------------AIPPSRS--TYNNLINACGSSGNWK 157
+ D+M I P R ++N +++ +G
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
+A +V +M + + V+ N LLSA+ S+ +A F+ + + + N ++
Sbjct: 175 DARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLL 226
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
VK ++ +A F+SM + DVVS+ +II Y+ SG+I+ F+ E
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVR------DVVSWNTIITGYAQSGKIDEARQLFD----ES 276
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+ ++ A+V Y + M +EA +F+++ + + VS+ ++L Y + ++ + A+
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAK 332
Query: 338 GVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+F+++ N+ ++N +I Y G + +A + +M + + VS ++A
Sbjct: 333 ELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPK----RDPVSWAAMIAGY 384
Query: 398 GRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADS 457
+ + + + G +LN +++SA+ + +V + L+ + K +
Sbjct: 385 SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC 444
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV--YSSILCAYSKQGQIVEAESTF 515
L+ CK EA +EM K++ +++++ YS+ G A F
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEM------AGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 516 NLMKSSGCSPDVVTYTSMLDAYTAAG 541
MK G PD T ++L A + G
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTG 524
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 153/360 (42%), Gaps = 31/360 (8%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
+I Q G I+ +F Q + + M+ + ++ +++AR LF +M E
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVF-----TWTAMVSGYIQNRMVEEARELFDKMPE- 309
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSR--STYNNLINACGSSGNWK 157
+ ++NA++ + + + A + D M P R ST+N +I G
Sbjct: 310 ---RNEVSWNAMLAGYVQGERMEMAKELFDVM------PCRNVSTWNTMITGYAQCGKIS 360
Query: 158 EALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVI 217
EA N+ KM D V+ +++ + +AL F M+ R + ++ + +
Sbjct: 361 EAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 218 HCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEG 277
+ + + + + E V + +++ +Y G IE F M +
Sbjct: 417 STCADVVALELGKQLHGRLVKGGYETGCFVGN--ALLLMYCKCGSIEEANDLFKEMAGK- 473
Query: 278 IKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
IVS+N ++ Y+ HG G+ AL F +K+ G +PD + ++L+A + K R
Sbjct: 474 ---DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 338 GVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAA 396
F M + + PN Y ++D G GLL+DA +++ M +P+ TLL A
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP---FEPDAAIWGTLLGA 587
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 74/308 (24%)
Query: 239 KKSECHP-------DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+KS+ P D+ + I Y +G+ F M + S VSYN ++
Sbjct: 49 QKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISG 104
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPN 351
Y +G + A +F+E+ + D+VS+ ++ Y R++ KAR +FE++ + +
Sbjct: 105 YLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMP----ERD 156
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
+ S+N ++ Y NG +DDA + M +
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEK------------------------------ 186
Query: 412 AAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
N V++N+ + +Y+ + ++A L+KS + V++ L+ G K
Sbjct: 187 ---------NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKK 233
Query: 472 KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSP--DVVT 529
K EA F + M+++ VS +++I+ Y++ G+I EA F+ SP DV T
Sbjct: 234 KIVEARQFFDS-MNVRDVVS---WNTIITGYAQSGKIDEARQLFDE------SPVQDVFT 283
Query: 530 YTSMLDAY 537
+T+M+ Y
Sbjct: 284 WTAMVSGY 291
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 168/377 (44%), Gaps = 36/377 (9%)
Query: 86 IDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNN 145
++ AR +F EM + P+ +NA+I A R A I D ML + +++N
Sbjct: 157 VEFARKVFDEMHQ----PNLVAWNAVITACFRGNDVAGAREIFDKML----VRNHTSWNV 208
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH 205
++ +G + A + +M D V+ + ++ ++++ YF ++
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHR----DDVSWSTMIVGIAHNGSFNESFLYFRELQRAG 264
Query: 206 IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT-SIIHLYSVSGQIE 264
+ P+ +L V+ + ++ I + EK + +VS ++I +YS G +
Sbjct: 265 MSPNEVSLTGVLSACSQSGSFEFG-KILHGFVEKAG--YSWIVSVNNALIDMYSRCGNVP 321
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
F M K IVS+ +++ A HG G+EA+ +FNE+ G PD +S+ SLL
Sbjct: 322 MARLVFEGMQE---KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLL 378
Query: 325 NAYGRSQKPQKARGVFEMIKR-NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
+A + ++ F +KR ++P + Y ++D YG +G L A + +M I
Sbjct: 379 HACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP---I 435
Query: 384 QPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA------IGSYLNVGE 437
P + TLL G CS G IE Q +LN + N++ +Y G+
Sbjct: 436 PPTAIVWRTLL---GACSSHGNIELAEQVKQ----RLNELDPNNSGDLVLLSNAYATAGK 488
Query: 438 YDKALGLYKSMRKKKIK 454
+ + KSM ++IK
Sbjct: 489 WKDVASIRKSMIVQRIK 505
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 167/378 (44%), Gaps = 27/378 (7%)
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYF-ELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAID 231
PD N L+ + + +++ F E+M+ + PD+ + VI + R
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 232 IFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGA 291
+ + E H + T++I +Y G +E F+ M +P++V++NA++ A
Sbjct: 128 MHCQALKHGLESH--LFVGTTLIGMYGGCGCVEFARKVFDEMH----QPNLVAWNAVITA 181
Query: 292 YAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIKRNKLKP 350
A +F+++ + S+ +L Y ++ + + A+ +F EM R+
Sbjct: 182 CFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD--- 234
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE--- 407
VS++ +I NG +++ RE+++ G+ PN VS+ +L+AC SQ G E
Sbjct: 235 --VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC---SQSGSFEFGK 289
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
+ + G N+ I Y G A +++ M++K+ V++T +I+G
Sbjct: 290 ILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC---IVSWTSMIAGL 346
Query: 468 CKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS-GCSPD 526
+ EA+ EM + + S+L A S G I E E F+ MK P+
Sbjct: 347 AMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPE 406
Query: 527 VVTYTSMLDAYTAAGKMN 544
+ Y M+D Y +GK+
Sbjct: 407 IEHYGCMVDLYGRSGKLQ 424
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 150/353 (42%), Gaps = 37/353 (10%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
+N MI + R +D+A LF EM++ PD +++A GR G R+ I + ++
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT------------------------- 167
+ L+ +G A +KM+
Sbjct: 240 ENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQV 299
Query: 168 --DNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQ 225
D DLV ++SA+ +AL FE M + I+PD ++ VI L
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 226 YDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSY 285
DKA + + + E + ++I++Y+ G ++ F M + ++VS+
Sbjct: 360 LDKAKWVHSCIHVNGLESELSI--NNALINMYAKCGGLDATRDVFEKM----PRRNVVSW 413
Query: 286 NALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-EMIK 344
++++ A + HG +AL +F +KQ P+ V++ +L S ++ + +F M
Sbjct: 414 SSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Query: 345 RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
+ P L Y ++D +G LL +A++++ M + NVV +L++AC
Sbjct: 474 EYNITPKLEHYGCMVDLFGRANLLREALEVIESMP---VASNVVIWGSLMSAC 523
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 186/413 (45%), Gaps = 32/413 (7%)
Query: 101 CKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEAL 160
C P ET ++ + G+ +A N+ D+M + T+N +I G EA
Sbjct: 144 CDPFVET--GFMDMYASCGRINYARNVFDEMSHRDV----VTWNTMIERYCRFGLVDEAF 197
Query: 161 NVCKKMTDNGVGPD-LVTHNILLSAFKSGS-QYSKALSYFELMKGTHIRPDTTTLNIVIH 218
+ ++M D+ V PD ++ NI+ + ++G+ +Y++A+ +E + +R DT L ++
Sbjct: 198 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI--YEFLIENDVRMDTHLLTALVT 255
Query: 219 CLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
D A + F M + ++ T+++ YS G++++ + F+ +
Sbjct: 256 MYAGAGCMDMAREFFRKMSVR------NLFVSTAMVSGYSKCGRLDDAQVIFD----QTE 305
Query: 279 KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARG 338
K +V + ++ AY +EAL VF E+ +G +PD+VS S+++A KA+
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKW 365
Query: 339 VFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
V I N L+ L NALI+ Y G LD + +M + NVVS +++ A
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR----NVVSWSSMINALS 421
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKK-KIKADS 457
+ ++ + + ++ N V + + + G ++ ++ SM + I
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 458 VTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEV--YSSILCAYSKQGQI 508
Y ++ + + EAL +E M PV+ V + S++ A G++
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESM-----PVASNVVIWGSLMSACRIHGEL 529
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 193/475 (40%), Gaps = 55/475 (11%)
Query: 81 ARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR------- 133
R+ R +A G F EM+ +P+ TY+A+++ + I ++
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST 360
Query: 134 -------------------------AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
A + P+ ++ LI G ++ + +M
Sbjct: 361 DVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK 420
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
V P++VT + +L A + L + H+ + N ++ R+ D
Sbjct: 421 REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDY 480
Query: 229 AIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
A ++ SM+ + D ++YTS++ ++ G+ E + N M +GI+ +S
Sbjct: 481 AWNVIRSMKRR------DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGF 534
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+ A A G + + ++GF SL++ Y + + A+ VFE I
Sbjct: 535 ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA---- 590
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC--GRCSQKGKI 406
P++VS+N L+ SNG + A+ EM +P+ V+ LL+AC GR + G +
Sbjct: 591 TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG-L 649
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
E ++ I+ Y +G G ++A G+ ++M +K +++ + L+
Sbjct: 650 EYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAMIFKTLL-- 704
Query: 467 SCKMSKYGEALSFMEEMMHLKL---PVSKEVYSSILCAYSKQGQIVEAESTFNLM 518
+ +Y LS E+M + L P +Y + Y + G+ A+ T NLM
Sbjct: 705 --RACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLM 757
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/557 (19%), Positives = 230/557 (41%), Gaps = 88/557 (15%)
Query: 52 HCNLV-FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNA 110
HC ++ F ++N D+ N ++ L+ + + I AR LF EM +
Sbjct: 46 HCPVIKFGLLENL-------DLCNNLLSLYLKTDGIWNARKLFDEMSH----RTVFAWTV 94
Query: 111 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 170
+I+A ++ ++ A+++ ++M+ + P+ T+++++ +C + V + G
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG 154
Query: 171 VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAI 230
+ V + L + Q+ +A F ++ DT + ++I LV R++ +A+
Sbjct: 155 FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA----DTISWTMMISSLVGARKWREAL 210
Query: 231 DIFNSM-----------------------REKKSECHPD---------VVSYTSIIHLYS 258
++ M E H + VV TS++ YS
Sbjct: 211 QFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYS 270
Query: 259 VSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIV 318
Q E A ++ + G + + + ++V + + KEA+ F E++ G +P+
Sbjct: 271 ---QFSKMEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 319 SYTSLLNA--------YGRSQKPQKARGVFE------------------------MIKRN 346
+Y+++L+ +G+ Q + FE +
Sbjct: 327 TYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGA 386
Query: 347 KLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKI 406
+ PN+VS+ LI +G + D +L EM + ++PNVV++ +L AC + ++
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 407 ETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISG 466
+ + R + V NS + +Y + + D A + +SM+++ D++TYT L++
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTR 502
Query: 467 SCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPD 526
++ K+ ALS + M + + + + A + G + + SG S
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGA 562
Query: 527 VVTYTSMLDAYTAAGKM 543
S++D Y+ G +
Sbjct: 563 ASVLNSLVDMYSKCGSL 579
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 141/373 (37%), Gaps = 56/373 (15%)
Query: 20 DIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWMKN--QRNYCARNDIYNMMI 77
D GLL V R N L L + H V + +R+ + N ++
Sbjct: 410 DCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLV 469
Query: 78 RLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM------ 131
+A ++D A + M+ + D TY +L+ G+ A+++++ M
Sbjct: 470 DAYASSRKVDYAWNVIRSMK----RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIR 525
Query: 132 -----------------------------LRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
+++ + S N+L++ G+ ++A
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA--- 582
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
KK+ + PD+V+ N L+S S S ALS FE M+ PD+ T I++
Sbjct: 583 -KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
R D ++ F M+ K P V Y +HL + G+ E A ++ +KP+
Sbjct: 642 GRLTDLGLEYFQVMK-KIYNIEPQVEHY---VHLVGILGRAGRLEEATGVVETMHLKPNA 697
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFR---PDIVSYTSLLNAYGRSQKPQKARGV 339
+ + L+ A G L + ++ G D Y L + Y S KP+ A+
Sbjct: 698 MIFKTLLRACRYRG----NLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKT 753
Query: 340 FEMIKRNKLKPNL 352
++ +L L
Sbjct: 754 RNLMTEKRLSKKL 766
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 143/322 (44%), Gaps = 6/322 (1%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
+I N +I L + + A +F + +E+ P+A+TY + A + WA ++ +
Sbjct: 232 EILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEK 291
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCK--KMTDNGVGPDLVTHNILLSAFKSG 188
ML++ + N+I G +EA +V + K + + P V ++ + K+
Sbjct: 292 MLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA-TLITALCKND 350
Query: 189 SQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVV 248
+ A + G R + VIH L ++R A + M K P
Sbjct: 351 GTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGP--APGNA 408
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
+ ++H S +G ++ + +M + G+KP + +Y ++ YA GM EA + E
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL- 367
K+ + V+Y +L+ Y + ++ +A + + R ++PN YN LI ++ L
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALD 528
Query: 368 LDDAIKILREMEQDGIQPNVVS 389
+ A + EM+Q G+ N +S
Sbjct: 529 WEKAEVLFEEMKQKGLHLNAIS 550
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 177/404 (43%), Gaps = 24/404 (5%)
Query: 36 NFPFLIKELTQRGSIEHCNLV--FQW-MKNQRNYCARNDIYNMMIRLHARHNRIDQARGL 92
+ F+++ G I NL+ +W +N+ + + ++++ + + R+D A GL
Sbjct: 156 HLDFVVRVFESPG-ISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMD-AYGL 213
Query: 93 FFEMQEWRCKP-----DAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 147
+ ++E K + E N LI G+ G+ + A ++ P+ TY +
Sbjct: 214 WDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTL 273
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
A A +VC+KM +GV + +++ F + +A S +EL K +
Sbjct: 274 EALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAK---TK 330
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSM------REKKSECHPDVVSYTSIIHLYSVSG 261
+ V + L + D I M ++ P ++ +IH
Sbjct: 331 EKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMR 386
Query: 262 QIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYT 321
+++ +A M+++G P +N +V A + G EA V ++ G +PD+ +YT
Sbjct: 387 NVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYT 446
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
+++ Y + +A+ + K+ K + V+Y+ALI Y D+A+K+L EM++
Sbjct: 447 VIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRF 506
Query: 382 GIQPNVVSICTLLAA-CGRCSQKGKIETVLSAAQMRGIKLNTVA 424
G+QPN L+ + C + K E + + +G+ LN ++
Sbjct: 507 GVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 149/349 (42%), Gaps = 43/349 (12%)
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
N LI G G K A +V K + G P+ T+ + L A S A S E M
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI 263
+ + + + +I K + ++A ++ + K+ P V+ T I L G I
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA-TLITALCKNDGTI 353
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
+A +G + E ++ G +P ++ +
Sbjct: 354 ---------------------------TFAQEMLGD----LSGEARRRGIKP----FSDV 378
Query: 324 LNAYGRSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
+++ R + + A+ + +MI + N V +N ++ A G LD+A ++L+ ME G
Sbjct: 379 IHSLCRMRNVKDAKALLLDMISKGPAPGNAV-FNLVVHACSKTGDLDEAKEVLKLMESRG 437
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
++P+V + +++ + + + +L+ A+ + KL+ V Y++ I Y + EYD+AL
Sbjct: 438 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 497
Query: 443 GLYKSMRKKKIKADSVTYTILISGSC-KMSKYGEALSFMEEM----MHL 486
L M + ++ ++ Y LI C K + +A EEM +HL
Sbjct: 498 KLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHL 546
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 118/285 (41%), Gaps = 17/285 (5%)
Query: 1 MDWTVSEVAEQVLSLTLYDDIDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNLVFQWM 60
MDW S V E++L + + + + N +I + G E V++
Sbjct: 282 MDWACS-VCEKMLKSGVLSEGEQMGN-------------IITWFCKEGKAEEAYSVYELA 327
Query: 61 KNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQ 120
K + + ++ L I A+ + ++ + + ++ +I++ R
Sbjct: 328 KTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRN 387
Query: 121 WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI 180
+ A ++ DM+ P + +N +++AC +G+ EA V K M G+ PD+ T+ +
Sbjct: 388 VKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTV 447
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
++S + G +A K H + T + +I K+ +YD+A+ + N M +
Sbjct: 448 IISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM--DR 505
Query: 241 SECHPDVVSYTSIIHLYSVSG-QIENCEAAFNMMLAEGIKPSIVS 284
P+ Y +I + + E E F M +G+ + +S
Sbjct: 506 FGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 152/384 (39%), Gaps = 21/384 (5%)
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI-----VIHCLVKLRQYDKAIDIFNS 235
LL A S ++ A ++L+K + LN+ +I KL + A D+F+
Sbjct: 197 LLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSK 256
Query: 236 MREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAH 295
E P+ +Y + ++ + ML G+ ++ +
Sbjct: 257 TEEFG--FTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKE 314
Query: 296 GMGKEALLVFN--EIKQNGFRPDIVS--YTSLLNAYGRSQKPQKARGVFE-MIKRNKLKP 350
G +EA V+ + K+ P V+ T+L G Q+ G +R +KP
Sbjct: 315 GKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP 374
Query: 351 NLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVL 410
++ +I + + DA +L +M G P ++ AC + + + VL
Sbjct: 375 ----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVL 430
Query: 411 SAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+ RG+K + Y I Y G D+A + +KK K VTY LI G CK+
Sbjct: 431 KLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKI 490
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE-AESTFNLMKSSGCSPDVVT 529
+Y EAL + EM + + + Y+ ++ ++ + E AE F MK G + ++
Sbjct: 491 EEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Query: 530 YTSMLDAYTAAGKMNFEPLKYEDG 553
+ A +M E EDG
Sbjct: 551 QGLI----RAVKEMESEAKVTEDG 570
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 194/477 (40%), Gaps = 68/477 (14%)
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGV---GPDLVTHNILLSAFKS 187
+L+ P+ ++N I S N KE+ + K+M +G PD T+ +L FK
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL---FKV 165
Query: 188 GSQYS-KALSYFELMKGTHIRPDTTTL--NIVIHCLVKLRQYDKAIDIFNSMREKKSECH 244
+ +L + L +R + + N IH + A +F+ +
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR----- 220
Query: 245 PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLV 304
D+VS+ +I+ Y G+ E + +M +EG+KP V+ LV + + G
Sbjct: 221 -DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 305 FNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGS 364
+ +K+NG R I +L++ + + +AR +F+ N K +VS+ +I Y
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD----NLEKRTIVSWTTMISGYAR 335
Query: 365 NGLLD-------------------------------DAIKILREMEQDGIQPNVVSICTL 393
GLLD DA+ + +EM+ +P+ +++
Sbjct: 336 CGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHC 395
Query: 394 LAACGRCSQKGKIET---VLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
L+AC SQ G ++ + + + LN S + Y G +AL ++ ++
Sbjct: 396 LSAC---SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
+ +S+TYT +I G A+S+ EM+ + + + +L A G I
Sbjct: 453 R----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 511 AESTFNLMKSS-GCSPDVVTYTSMLDAYTAAG-------KMNFEPLKYEDGFWKCML 559
F+ MKS +P + Y+ M+D AG M P++ + W +L
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 19/277 (6%)
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
NAL++ + G A I D++ + I ++ +I+ G L+V +K+ D
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCG----LLDVSRKLFD 347
Query: 169 NGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDK 228
+ D+V N ++ + AL+ F+ M+ ++ +PD T+ IHCL Q
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM---IHCLSACSQLGA 404
Query: 229 A-IDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP-SIVSYN 286
+ I+ +K +V TS++ +Y+ G I + F+ GI+ + ++Y
Sbjct: 405 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFH-----GIQTRNSLTYT 459
Query: 287 ALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK-R 345
A++G A HG A+ FNE+ G PD +++ LL+A Q R F +K R
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Query: 346 NKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
L P L Y+ ++D G GLL++A +++ M +
Sbjct: 520 FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 175/433 (40%), Gaps = 61/433 (14%)
Query: 105 AETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS--TYNNLINACGSSGNWKEALNV 162
+ +NA I+ G A + D+ P R ++N LIN G ++A+ V
Sbjct: 191 SHVHNASIHMFASCGDMENARKVFDE------SPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
K M GV PD VT L+S+ ++ ++E +K +R +N ++ K
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSK 304
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
+A IF+++ EK++ +VS+T++I Y+ G ++ F+ M + +
Sbjct: 305 CGDIHEARRIFDNL-EKRT-----IVSWTTMISGYARCGLLDVSRKLFDDME----EKDV 354
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
V +NA++G G++AL +F E++ + +PD ++ L+A +
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL------------ 402
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
G LD I I R +E+ + NV +L+ +C
Sbjct: 403 -----------------------GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 403 KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
+ +V Q R N++ Y + IG G+ A+ + M I D +T+
Sbjct: 440 ISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 463 LISGSCKMSKYGEALSFMEEMM-HLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSS 521
L+S C + +M L + YS ++ + G + EA+ LM+S
Sbjct: 496 LLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEAD---RLMESM 552
Query: 522 GCSPDVVTYTSML 534
D + ++L
Sbjct: 553 PMEADAAVWGALL 565
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 172/406 (42%), Gaps = 35/406 (8%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKP--DAETYNALINAHGRAGQWRWAMNIMD 129
++N I + A ++ AR +F E P D ++N LIN + + G+ A+ +
Sbjct: 193 VHNASIHMFASCGDMENARKVFDE------SPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 130 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGS 189
M + P T L+++C G+ + + +NG+ + N L+ F
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 190 QYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS 249
+A F+ ++ I TT ++ C + D + +F+ M EK DVV
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGL----LDVSRKLFDDMEEK------DVVL 356
Query: 250 YTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIK 309
+ ++I + + ++ A F M KP ++ + A + G + + I+
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 310 QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK-RNKLKPNLVSYNALIDAYGSNGLL 368
+ ++ TSL++ Y + +A VF I+ RN L +Y A+I +G
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL-----TYTAIIGGLALHGDA 471
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS-AAQMRG-IKLNTVAYN 426
AI EM GI P+ ++ LL+A C G I+T +QM+ LN +
Sbjct: 472 STAISYFNEMIDAGIAPDEITFIGLLSA---CCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 427 SAIGSYL--NVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+I L G ++A L +SM ++AD+ + L+ G C+M
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESM---PMEADAAVWGALLFG-CRM 570
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 22/302 (7%)
Query: 102 KPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 161
+P+ TY ++ + GR G I +L+ A S T N LI+ +A+
Sbjct: 201 EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMR 260
Query: 162 VCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK-GTHIRPDTTTLNIVIHCL 220
V ++ D V+ N ++S + +A+ F LM+ + I+PD L V+
Sbjct: 261 VFGELEKK----DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 221 VKLRQYDKAIDIFNSMREK--KSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
L D + + K + H T+I+ +Y+ G IE FN GI
Sbjct: 317 ASLGAVDHGRWVHEYILTAGIKWDTHIG----TAIVDMYAKCGYIETALEIFN-----GI 367
Query: 279 KP-SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAR 337
+ ++ ++NAL+G A HG G E+L F E+ + GF+P++V++ + LNA + + R
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGR 427
Query: 338 GVFEMIKRNK--LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
F +K + L P L Y +ID GLLD+A+++++ M ++P+V +L+
Sbjct: 428 RYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP---VKPDVRICGAILS 484
Query: 396 AC 397
AC
Sbjct: 485 AC 486
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 158/410 (38%), Gaps = 63/410 (15%)
Query: 177 THNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSM 236
++N LLS++ + + ++ PD T V KA F+ +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVF----------KACGKFSGI 122
Query: 237 REKKS--------ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNAL 288
RE K + D+ S++H Y V G+ N F M +VS+ +
Sbjct: 123 REGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR----DVVSWTGI 178
Query: 289 VGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKL 348
+ + G+ KEAL F+++ P++ +Y +L + GR +G+ +I +
Sbjct: 179 ITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS 235
Query: 349 KPNLVSYNALIDAYGSNGLLDDAIKILREMEQ---------------------------- 380
+L + NALID Y L DA+++ E+E+
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 381 ----DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVG 436
GI+P+ + ++L+AC V GIK +T + + Y G
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCG 355
Query: 437 EYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYS 496
+ AL ++ +R K + T+ L+ G E+L + EEM+ L + +
Sbjct: 356 YIETALEIFNGIRSKNV----FTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFL 411
Query: 497 SILCAYSKQGQIVEAESTFNLMKSS--GCSPDVVTYTSMLDAYTAAGKMN 544
+ L A G + E F+ MKS P + Y M+D AG ++
Sbjct: 412 AALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLD 461
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 122/307 (39%), Gaps = 39/307 (12%)
Query: 268 AAFNMMLAEGIKP--SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
A+++ ++ I+ S SYN L+ +YA + + + NGF PD+ ++ +
Sbjct: 55 ASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFK 114
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM------- 378
A G+ ++ + + ++ + ++ N+L+ YG G +A K+ EM
Sbjct: 115 ACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVS 174
Query: 379 ---------------------EQDGIQPNVVSICTLLAACGR--CSQKGKIETVLSAAQM 415
+ ++PN+ + +L + GR C GK L +
Sbjct: 175 WTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 416 RGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGE 475
I L T N+ I Y+ + A+ ++ + KK D V++ +ISG + E
Sbjct: 235 SLISLET--GNALIDMYVKCEQLSDAMRVFGELEKK----DKVSWNSMISGLVHCERSKE 288
Query: 476 ALSFMEEMMHLK-LPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
A+ M + + +S+L A + G + + ++G D T+++
Sbjct: 289 AIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIV 348
Query: 535 DAYTAAG 541
D Y G
Sbjct: 349 DMYAKCG 355
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/478 (19%), Positives = 197/478 (41%), Gaps = 25/478 (5%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
++N +++ + H + A L+ M++ D ++ A G++ +
Sbjct: 125 LWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
++ + + N L+ +G +A N+ +M + ++ N+++ F
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR----NRMSWNVMIKGFSQEYDC 240
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYT 251
A+ FE M+ +PD T V+ C + +++ + F+ MR + VS
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG-----NAVSGE 295
Query: 252 SIIHLYSVSGQIEN---CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
++ +SV ++E E ++ G + + S NAL+ Y G K+A +F +I
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF----EMIKRNKLKPNLVSYNALIDAYGS 364
+ G I S+ SL+ ++ + K +A +F EM +K N+V++ ++I
Sbjct: 356 RNKG----IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNV 411
Query: 365 NGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVA 424
G DD+++ R+M+ + N V+IC +L+ C + + N +
Sbjct: 412 QGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILV 471
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
N+ + Y G + +++++R K D +++ +I G +ALS + M+
Sbjct: 472 QNALVNMYAKCGLLSEGSLVFEAIRDK----DLISWNSIIKGYGMHGFAEKALSMFDRMI 527
Query: 485 HLKLPVSKEVYSSILCAYSKQGQIVEAESTF-NLMKSSGCSPDVVTYTSMLDAYTAAG 541
++L A S G + + F ++ K G P Y ++D G
Sbjct: 528 SSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVG 585
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 147/296 (49%), Gaps = 22/296 (7%)
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD 168
NALI+ +G+ G+ + A ++ + I ++N+LI + +G EAL++ ++ +
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGI----ESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 169 NG----VGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR 224
V ++VT ++ + +L YF M+ + + ++ T+ ++ +L
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 225 QYDKAIDIF-NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK-PSI 282
+ +I + +R SE +++ +++++Y+ G + F E I+ +
Sbjct: 449 ALNLGREIHGHVIRTSMSE---NILVQNALVNMYAKCGLLSEGSLVF-----EAIRDKDL 500
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF-E 341
+S+N+++ Y HG ++AL +F+ + +GF PD ++ ++L+A + +K R +F
Sbjct: 501 ISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYS 560
Query: 342 MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAAC 397
M KR L+P Y ++D G G L +A +I++ M ++P V + LL +C
Sbjct: 561 MSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP---MEPKVCVLGALLNSC 613
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 5/202 (2%)
Query: 321 TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQ 380
+L++ Y R AR VFE + L +L +N+++ A S+GL ++A+++ R M Q
Sbjct: 93 ANLISVYARLGLLLDARNVFETVSL-VLLSDLRLWNSILKANVSHGLYENALELYRGMRQ 151
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
G+ + + +L AC + G + G+K N N + Y G
Sbjct: 152 RGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGD 211
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A L+ M + + +++ ++I G + A+ E M + + ++S+L
Sbjct: 212 AYNLFVEMPVR----NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLS 267
Query: 501 AYSKQGQIVEAESTFNLMKSSG 522
+S+ G+ + F+LM+ SG
Sbjct: 268 CHSQCGKFEDVLKYFHLMRMSG 289
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 177/426 (41%), Gaps = 59/426 (13%)
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
N +++A+ AL F M+ + PD+ TL+ VI C L Y+ + + +
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
+ + + S +++ LYS G C+ ++ + +V++ +L+ +G
Sbjct: 402 RPIQSTSTIES--ALLTLYSKCG----CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKF 455
Query: 299 KEALLVFNEIKQN--GFRPD-----------------------------------IVSYT 321
KEAL VF ++K + +PD + +
Sbjct: 456 KEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGS 515
Query: 322 SLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQD 381
SL++ Y + P+ A VF + N+V++N++I Y N L + +I + M
Sbjct: 516 SLIDLYSKCGLPEMALKVFTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQ 571
Query: 382 GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
GI P+ VSI ++L A + K +++ GI +T N+ I Y+ G A
Sbjct: 572 GIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYA 631
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
++K M+ K + +T+ ++I G ALS +EM + S++ A
Sbjct: 632 ENIFKKMQHKSL----ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 502 YSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKMNFE-------PLKYEDG 553
+ G + E ++ F MK G P++ Y +M+D AG + P++ +
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 554 FWKCML 559
W C+L
Sbjct: 748 IWLCLL 753
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 206/489 (42%), Gaps = 50/489 (10%)
Query: 69 RNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIM 128
R +I+N M+ +A ++ A LF M++ PD+ T + +I+ G + + ++
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH 396
Query: 129 DDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSG 188
++ + I + + + L+ G +A V K M + D+V L+S
Sbjct: 397 AELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGLCKN 452
Query: 189 SQYSKALSYFELMK--GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPD 246
++ +AL F MK ++PD+ + V + L + + SM K+ +
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM--IKTGLVLN 510
Query: 247 VVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFN 306
V +S+I LYS G E F M E ++V++N+++ Y+ + + + ++ +FN
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFN 566
Query: 307 EIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV--------------------------- 339
+ G PD VS TS+L A + K + +
Sbjct: 567 LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Query: 340 FEMIKRNKLK----PNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
F N K +L+++N +I YGS+G A+ + EM++ G P+ V+ +L++
Sbjct: 627 FSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLIS 686
Query: 396 ACGRCS--QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKI 453
AC ++GK Q GI+ N Y + + G ++A K+M I
Sbjct: 687 ACNHSGFVEEGK-NIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM---PI 742
Query: 454 KADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAES 513
+ADS + L+S S + E+++ ++ P Y ++ Y + G EA
Sbjct: 743 EADSSIWLCLLSASRTHHNVELGILSAEKLLRME-PERGSTYVQLINLYMEAGLKNEAAK 801
Query: 514 TFNLMKSSG 522
LMK G
Sbjct: 802 LLGLMKEKG 810
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 132/630 (20%), Positives = 250/630 (39%), Gaps = 129/630 (20%)
Query: 38 PFLIKELTQR----GSIEHCNLVFQ-WMKNQRNYCARN-DIYNMMIRLHARHNRIDQARG 91
PF+ L G +++ VF W ++Q AR+ ++N MI + + R + G
Sbjct: 95 PFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVG 154
Query: 92 LFFEMQEWRCKPDAETYNALINAHGRAGQWRW--AMNIMDDMLRAAIPPSRSTYNNLINA 149
F M + +PDA + + +++ + G +R I MLR ++ LI+
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214
Query: 150 CGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPD 209
G +A V ++ D ++V N+++ F +L + L K ++
Sbjct: 215 YFKFGLSIDAWRVFVEIEDK---SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 210 TTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAA 269
+T+ + + I + K H D TS++ +YS G + E
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVV--KMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 270 FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPD------IVSYTSL 323
F+ ++ + ++ +NA+V AYA + G AL +F ++Q PD ++S S+
Sbjct: 330 FSCVVDKRLEI----WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 324 LNA--YGRS------QKPQKARGVFE-----------------MIKRNKLKPNLVSYNAL 358
L YG+S ++P ++ E ++ ++ + ++V++ +L
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 359 IDAYGSNGLLDDAIKILREM--EQDGIQPNVVSICTLLAAC-------------GRCSQK 403
I NG +A+K+ +M + D ++P+ + ++ AC G +
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 404 GKIETVLSAAQM-----------RGIKL-------NTVAYNSAIGSYLNVGEYDKALGLY 445
G + V + + +K+ N VA+NS I Y + ++ L+
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565
Query: 446 KSMRKKKIKADSVTYT-ILISGS------------------------------------C 468
M + I DSV+ T +L++ S C
Sbjct: 566 NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKC 625
Query: 469 KMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVV 528
SKY E + ++M H L ++ ++ Y G + A S F+ MK +G SPD V
Sbjct: 626 GFSKYAENI--FKKMQHKSLI----TWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 529 TYTSMLDA-----YTAAGKMNFEPLKYEDG 553
T+ S++ A + GK FE +K + G
Sbjct: 680 TFLSLISACNHSGFVEEGKNIFEFMKQDYG 709
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 178/427 (41%), Gaps = 52/427 (12%)
Query: 63 QRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
+R + + I + ++ L+++ A +F M+E D + +LI+ + G+++
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE----KDMVAWGSLISGLCKNGKFK 456
Query: 123 WAMNIMDDMLRA--AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNI 180
A+ + DM ++ P ++ NAC + L V M G+ ++ +
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 181 LLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKK 240
L+ + AL F M + N +I C + + +ID+FN M +
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMS----TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 241 SECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKP-------------------- 280
PD VS TS++ S + + ++ L GI
Sbjct: 573 --IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 281 -----------SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
S++++N ++ Y +HG AL +F+E+K+ G PD V++ SL++A
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH 690
Query: 330 SQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAYGSNGLLDDAIKILREM--EQDGIQPN 386
S ++ + +FE +K++ ++PN+ Y ++D G GLL++A ++ M E D
Sbjct: 691 SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADS---- 746
Query: 387 VVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYK 446
SI L + R ++ + + +R Y I Y+ G ++A L
Sbjct: 747 --SIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLG 804
Query: 447 SMRKKKI 453
M++K +
Sbjct: 805 LMKEKGL 811
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 154/359 (42%), Gaps = 20/359 (5%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQ--RNYCARNDIYNMMIRLHARHNRIDQARGLF 93
+ ++K + + E +F+ ++ + R C +YN I L R N + + +
Sbjct: 178 TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERI- 236
Query: 94 FEMQEWRC-KPDAE-----TYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLI 147
WR K D TY+ L++ R G+ A+++ D+M+ I +I
Sbjct: 237 -----WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMI 291
Query: 148 NACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIR 207
+AC W AL + + M G+ P+LV N L+++ + + ++K +
Sbjct: 292 SACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK 351
Query: 208 PDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCE 267
PD T N ++ L K +Y+ + +F+ +R + C + + T+++ + G E
Sbjct: 352 PDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKL-GYWEKAV 410
Query: 268 AAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAY 327
M G+ S SYN ++ A K ALLV+ + Q +P+ +Y SL+ +
Sbjct: 411 KLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSC 470
Query: 328 GRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPN 386
+ + + K++P++ YNA I A ++ +M + G++P+
Sbjct: 471 IWGSLWDEVEDILK-----KVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 158/348 (45%), Gaps = 13/348 (3%)
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
AL F+ M+ ++P+ N + CL++ KA +F MR+K+ +V +T
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-----NVTGHTYS 180
Query: 254 IHLYSVSGQIENCEAAFNMMLAEGIKP------SIVSYNALVGAYAAHGMGKEALLVFNE 307
+ L +V+ +++ CE+A M +P +V YN + E ++
Sbjct: 181 LMLKAVA-EVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRV 239
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGL 367
+K +G ++Y+ L++ + R + + A V++ + NK+ + A+I A
Sbjct: 240 MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEK 299
Query: 368 LDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNS 427
D A+KI + M + G++PN+V+ TL+ + G+ + G + V S + G K + +N+
Sbjct: 300 WDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNA 359
Query: 428 AIGSYLNVGEYDKALGLYKSMRKKKIKA-DSVTYTILISGSCKMSKYGEALSFMEEMMHL 486
+ + Y+ L L+ +R + + + Y + K+ + +A+ + EM
Sbjct: 360 LLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGS 419
Query: 487 KLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSML 534
L VS Y+ ++ A K + A + M C P+ TY S++
Sbjct: 420 GLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 178/400 (44%), Gaps = 20/400 (5%)
Query: 77 IRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAI 136
+R +R +++ A LF M+ +P+A N+ ++ R G + A + + M R
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFM-RKKE 172
Query: 137 PPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGP---DLVTHNILLSAFKSGSQYSK 193
+ TY+ ++ A + AL + +++ D+V +N +S + +
Sbjct: 173 NVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYE 232
Query: 194 ALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSI 253
+ +MKG T ++++ V+ + + A+D+++ M K D ++
Sbjct: 233 TERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED-----AM 287
Query: 254 IHLYSVSGQIENCEAA---FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
+ S + E + A F ML +G+KP++V+ N L+ + G V++ +K
Sbjct: 288 YAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKS 347
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKP-NLVSYNALIDAYGSNGLLD 369
G +PD ++ +LL A ++ + + +F+MI+ L N YN + + G +
Sbjct: 348 LGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWE 407
Query: 370 DAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE-TVLSAAQMRGIKLNTVAYNSA 428
A+K+L EME G+ + S +++AC + S+K K+ V R K NT Y S
Sbjct: 408 KAVKLLYEMEGSGLTVSTSSYNLVISACEK-SRKSKVALLVYEHMAQRDCKPNTFTYLSL 466
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSC 468
+ S + +D+ + KK++ D Y I G C
Sbjct: 467 VRSCIWGSLWDEVEDIL-----KKVEPDVSLYNAAIHGMC 501
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 120/259 (46%), Gaps = 15/259 (5%)
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLV--SYN 356
+ AL +F+ ++ G +P+ + S L+ R+ QKA VFE +++ K N+ +Y+
Sbjct: 124 RSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRK---KENVTGHTYS 180
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQP---NVVSICTLLAACGRCSQKGKIETVLSAA 413
++ A + A+++ RE+E++ + +VV T ++ CGR + + E +
Sbjct: 181 LMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVM 240
Query: 414 QMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
+ G + Y+ + ++ G + AL +Y M KI +IS K K+
Sbjct: 241 KGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKW 300
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSM 533
AL + M+ + + ++++ + K G++ ++++KS G PD T+ ++
Sbjct: 301 DLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNAL 360
Query: 534 LDAYTAAGKMNFEPLKYED 552
L A A +YED
Sbjct: 361 LTALYKAN-------RYED 372
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 189/432 (43%), Gaps = 87/432 (20%)
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMRE 238
N ++ AF + +AL ++ ++ + + PD T VI L + ++ + +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 239 KKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMG 298
E D+ +++ +YS G + F+ M +VS+N+L+ Y++HG
Sbjct: 135 MGFE--SDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNSLISGYSSHGYY 188
Query: 299 KEALLVFNEIKQNGFRPDIVSYTSLLNAYG------------------------------ 328
+EAL +++E+K + PD + +S+L A+G
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 329 -----RSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDG 382
+ ++P AR VF EM R+ VSYN +I Y ++++++++ E D
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDS-----VSYNTMICGYLKLEMVEESVRMFLE-NLDQ 302
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL---------------------- 420
+P+++++ ++L ACG + + + G L
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 421 ---------NTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMS 471
+TV++NS I Y+ G+ +A+ L+K M + +AD +TY +LIS S +++
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 472 --KYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVT 529
K+G+ L + + + V ++++ Y+K G++ ++ F+ M + D VT
Sbjct: 423 DLKFGKGLH--SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG----DTVT 476
Query: 530 YTSMLDAYTAAG 541
+ +++ A G
Sbjct: 477 WNTVISACVRFG 488
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 206/479 (43%), Gaps = 78/479 (16%)
Query: 109 NALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS--TYNNLINACGSSGNWKEALNVCKKM 166
NAL++ + R G A + D+M P R ++N+LI+ S G ++EAL + ++
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEM------PVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 167 TDNGVGPDLVTHNILLSAF------KSGSQ-YSKALS----------------YFELMKG 203
++ + PD T + +L AF K G + AL Y + +
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 204 THIRP--------DTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
T R D+ + N +I +KL ++++ +F E + PD+++ +S++
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF---LENLDQFKPDLLTVSSVLR 315
Query: 256 LYSVSGQIENCEAA---FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
G + + A +N ML G N L+ YA G A VFN ++
Sbjct: 316 ---ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK- 371
Query: 313 FRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAI 372
D VS+ S+++ Y +S +A +F+M+ + + + ++Y LI S L D +
Sbjct: 372 ---DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV--STRLAD--L 424
Query: 373 KILREMEQDGIQPNVV-------SICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
K + + +GI+ + ++ + A CG KI + + +TV +
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-------DTVTW 477
Query: 426 NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY--TILISGSCKMSKYGEALSFMEEM 483
N+ I + + G++ L + MRK ++ D T+ T+ + S + G+ + +
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC--L 535
Query: 484 MHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGK 542
+ ++ ++++ YSK G + + F M DVVT+T M+ AY G+
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR----DVVTWTGMIYAYGMYGE 590
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 177/403 (43%), Gaps = 20/403 (4%)
Query: 66 YCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
+ + + N++I ++A+ + AR +F M+ CK D ++N++I+ + ++G AM
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSME---CK-DTVSWNSIISGYIQSGDLMEAM 393
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
+ M+ TY LI+ + K + +G+ DL N L+ +
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
+ +L F M GT DT T N VI V+ + + + MR KSE P
Sbjct: 454 AKCGEVGDSLKIFSSM-GTG---DTVTWNTVISACVRFGDFATGLQVTTQMR--KSEVVP 507
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
D+ ++ + + + + +L G + + NAL+ Y+ G + + VF
Sbjct: 508 DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF 567
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
+ R D+V++T ++ AYG + +KA F ++++ + P+ V + A+I A +
Sbjct: 568 ERMS----RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHS 623
Query: 366 GLLDDAIKILREMEQD-GIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVA 424
GL+D+ + +M+ I P + ++ R + K E + A IK +
Sbjct: 624 GLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP---IKPDASI 680
Query: 425 YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
+ S + + G+ + A + S R ++ D Y+IL S +
Sbjct: 681 WASVLRACRTSGDMETAERV--SRRIIELNPDDPGYSILASNA 721
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 151/359 (42%), Gaps = 56/359 (15%)
Query: 228 KAIDIFNSMREKKSECH--------PDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
K ID ++ RE S +V + SII +S +G + + +
Sbjct: 44 KLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVS 103
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGV 339
P ++ +++ A A + LV+ +I GF D+ +L++ Y R +AR V
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 340 F-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACG 398
F EM R +LVS+N+LI Y S+G ++A++I E++ I P+ ++ ++L A G
Sbjct: 164 FDEMPVR-----DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218
Query: 399 RCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSV 458
+ + + A G+ V N + YL A ++ M + DSV
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSV 274
Query: 459 TYTILISGSCKMSKYGEALS-FMEEMMHLK------------------LPVSKEVYSSIL 499
+Y +I G K+ E++ F+E + K L ++K +Y+ +L
Sbjct: 275 SYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Query: 500 CA---------------YSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
A Y+K G ++ A FN M+ D V++ S++ Y +G +
Sbjct: 335 KAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK----DTVSWNSIISGYIQSGDL 389
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 177/421 (42%), Gaps = 45/421 (10%)
Query: 103 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 162
P+ E + ++ R G A ++ M+ + I S + ++ L++ SG ++A+++
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 163 CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
KM G P+LVT+ L+ F +A + ++ + PD N++IH +
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 223 LRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSI 282
L ++++A +F S+ ++K PD ++ SI+ +SG+ + + G +
Sbjct: 330 LGRFEEARKVFTSLEKRK--LVPDQYTFASILSSLCLSGKF---DLVPRITHGIGTDFDL 384
Query: 283 VSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEM 342
V+ N L ++ G AL V + + F D +YT L+A R P+ A ++++
Sbjct: 385 VTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKI 444
Query: 343 IKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
I + K + ++A+ID+ G + A+ + + RC
Sbjct: 445 IIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK----------------------RCI- 481
Query: 403 KGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTI 462
+ L+ V+Y AI + ++A L M++ I + TY
Sbjct: 482 ------------LEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRT 529
Query: 463 LISGSCKMSKYGEALSFMEEMMHLKL---PVSKEVYSSILCAYSKQGQIVEAESTFNLMK 519
+ISG CK + + + E + + P +K S+L Y +G E S F K
Sbjct: 530 IISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRY--RGDFSEFRSVFEKWK 587
Query: 520 S 520
S
Sbjct: 588 S 588
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 7/279 (2%)
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
SG+ + FN M+ G P++V+Y +L+ + GM EA V ++++ G PDIV
Sbjct: 260 SGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVL 319
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM- 378
+++ Y R + ++AR VF +++ KL P+ ++ +++ + +G D +I +
Sbjct: 320 CNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG 379
Query: 379 -EQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
+ D + N++S C + G S K VLS + L+ Y + + G
Sbjct: 380 TDFDLVTGNLLSNC--FSKIGYNSYALK---VLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
A+ +YK + K+K D+ ++ +I ++ KY A+ + + K P+ Y+
Sbjct: 435 PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTV 494
Query: 498 ILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
+ + +I EA S MK G P+ TY +++
Sbjct: 495 AIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISG 533
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 179/439 (40%), Gaps = 51/439 (11%)
Query: 74 NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR 133
NMM+ ++ + N ++ A +F E +R + + + G G ++ M+
Sbjct: 147 NMMMDVNFKLNVVNGALEIF-EGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIG 205
Query: 134 AAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF-KSGSQYS 192
P+R + ++ C +G EA V M +G+ + ++L+S F +SG
Sbjct: 206 EGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEP-- 263
Query: 193 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTS 252
KA+D+FN M + C P++V+YTS
Sbjct: 264 ----------------------------------QKAVDLFNKMIQIG--CSPNLVTYTS 287
Query: 253 IIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNG 312
+I + G ++ + + +EG+ P IV N ++ Y G +EA VF +++
Sbjct: 288 LIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
Query: 313 FRPDIVSYTSLLNAYGRSQK----PQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
PD ++ S+L++ S K P+ G+ +LV+ N L + + G
Sbjct: 348 LVPDQYTFASILSSLCLSGKFDLVPRITHGI-------GTDFDLVTGNLLSNCFSKIGYN 400
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
A+K+L M + + L+A R + L+ +++
Sbjct: 401 SYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAI 460
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I S + +G+Y+ A+ L+K +K D V+YT+ I G + + EA S +M +
Sbjct: 461 IDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGI 520
Query: 489 PVSKEVYSSILCAYSKQGQ 507
++ Y +I+ K+ +
Sbjct: 521 YPNRRTYRTIISGLCKEKE 539
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 156/366 (42%), Gaps = 49/366 (13%)
Query: 180 ILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREK 239
+LL F G Y KA+ + M P+T +N+++ KL + A++IF +R +
Sbjct: 113 LLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR 172
Query: 240 KSECHPDVVSY-TSIIHLYSVSGQ--IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+ S+ ++ H S G+ + + M+ EG P+ + ++ G
Sbjct: 173 ------NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTG 226
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYN 356
EA V + +G + ++ L++ + RS +PQKA +F + + PNLV+Y
Sbjct: 227 CVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYT 286
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR 416
+LI + G++D+A +L +++ +G+ P++V +C L+
Sbjct: 287 SLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV-LCNLM---------------------- 323
Query: 417 GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
I +Y +G +++A ++ S+ K+K+ D T+ ++S C K+
Sbjct: 324 ------------IHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF--- 368
Query: 477 LSFMEEMMHLKLPVSKEVYSSILC-AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLD 535
+ + H V ++L +SK G A ++M + D TYT L
Sbjct: 369 -DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLS 427
Query: 536 AYTAAG 541
A G
Sbjct: 428 ALCRGG 433
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 139/345 (40%), Gaps = 30/345 (8%)
Query: 209 DTTTLNIVIHCLVKLRQY---DKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIEN 265
D TLN C K Y D+A D + EK + + S II +SG
Sbjct: 52 DLKTLNFFFWC-AKQNNYFHDDRAFDHMVGVVEKLTR---EYYSIDRIIERLKISG---- 103
Query: 266 CEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLN 325
CE IKP + + L+ + + +A+ V+ + GF P+ + +++
Sbjct: 104 CE----------IKPRV--FLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMD 151
Query: 326 AYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKI---LREMEQDG 382
+ A +FE I+ N S++ + + S G D + + L+ M +G
Sbjct: 152 VNFKLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEG 207
Query: 383 IQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKAL 442
PN +L C R + V+ GI ++ ++ + + GE KA+
Sbjct: 208 FYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAV 267
Query: 443 GLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAY 502
L+ M + + VTYT LI G + EA + + ++ L + + ++ Y
Sbjct: 268 DLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTY 327
Query: 503 SKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNFEP 547
++ G+ EA F ++ PD T+ S+L + +GK + P
Sbjct: 328 TRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVP 372
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 129/318 (40%), Gaps = 7/318 (2%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
++++M++ R +A LF +M + C P+ TY +LI G A ++
Sbjct: 248 NVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSK 307
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
+ + P N +I+ G ++EA V + + PD T +LS+ +
Sbjct: 308 VQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK 367
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+ + G D T N++ +C K+ A+ + + M K + D +Y
Sbjct: 368 FDLVP---RITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYK--DFALDCYTY 422
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T + G + +++ E ++A++ + G A+ +F
Sbjct: 423 TVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCIL 482
Query: 311 NGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDD 370
+ D+VSYT + R+++ ++A + +K + PN +Y +I +
Sbjct: 483 EKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEK 542
Query: 371 AIKILREMEQDGIQ--PN 386
KILRE Q+G++ PN
Sbjct: 543 VRKILRECIQEGVELDPN 560
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 170/405 (41%), Gaps = 18/405 (4%)
Query: 90 RGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM-LRAAIPPSRSTYNNLIN 148
R L Q C+P + Y +I ++ Q +++ + + S + ++I
Sbjct: 57 RTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIA 116
Query: 149 ACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTH--I 206
A G SG +EA+ V K+ + P T N LL Q S L L+K +
Sbjct: 117 AYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ-SLELVPEILVKACRMGV 175
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS--YTSIIH-----LYSV 259
R + +T I+I L ++ + D A ++ M + P + S +S+ + V
Sbjct: 176 RLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDV 235
Query: 260 SGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVS 319
G +E+ P + Y ++ G GKE + V N++K + PD+V
Sbjct: 236 IGYLEDLRKT-------RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVC 288
Query: 320 YTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
YT +L + KA +F+ + L P++ +YN I+ ++ A+K++ M
Sbjct: 289 YTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMN 348
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+ G +PNVV+ L+ A + + +T+ + G+ N+ ++ I +Y+ V E
Sbjct: 349 KLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVV 408
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMM 484
A GL + + S +IS C+ +A+ + ++
Sbjct: 409 CAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 165/365 (45%), Gaps = 12/365 (3%)
Query: 37 FPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEM 96
+ F+IK L + +E+ + V ++ + I+ +I + RI++A +FF++
Sbjct: 75 YRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKI 134
Query: 97 QEWRCKPDAETYNALINAHGRAGQ-WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
+RC P A T NAL+ R Q I+ R + ST+ LI+A G
Sbjct: 135 PNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGE 194
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAF--KSGSQYSKALSYFELMKGTHIRPDTTTL 213
A + + M+ + V D ++ LLS+ S + Y E ++ T P
Sbjct: 195 VDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDY 254
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
+V+ LV+ + + + + N M+ + E PD+V YT ++ + F+ +
Sbjct: 255 TVVMRFLVEGGRGKEVVSVLNQMKCDRVE--PDLVCYTIVLQGVIADEDYPKADKLFDEL 312
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
L G+ P + +YN + + AL + + + + G P++V+Y L+ A ++
Sbjct: 313 LLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDL 372
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAY-------GSNGLLDDAIKILREMEQDGIQPN 386
+A+ +++ ++ N + N +++ +I AY ++GLL++A + ++ I+
Sbjct: 373 SRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEV 432
Query: 387 VVSIC 391
+ +C
Sbjct: 433 ISRLC 437
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 130/308 (42%), Gaps = 8/308 (2%)
Query: 243 CHPDVVSYTSIIHLYSVSGQIENCEAA-FNMMLAEGIKPSIVSYNALVGAYAAHGMGKEA 301
C P +Y +I + S Q+EN + +++ ++E + ++ AY G +EA
Sbjct: 68 CEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEA 127
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIK---RNKLKPNLVSYNAL 358
+ VF +I P + +LL R K Q V E++ R ++ ++ L
Sbjct: 128 IEVFFKIPNFRCVPSAYTLNALLLVLVR--KRQSLELVPEILVKACRMGVRLEESTFGIL 185
Query: 359 IDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGI 418
IDA G +D A +++R M QD + + LL++ + + + +R
Sbjct: 186 IDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKT 245
Query: 419 KLNT--VAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
+ + Y + + G + + + M+ +++ D V YTI++ G Y +A
Sbjct: 246 RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKA 305
Query: 477 LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDA 536
+E++ L L Y+ + KQ I A + M G P+VVTY ++ A
Sbjct: 306 DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKA 365
Query: 537 YTAAGKMN 544
AG ++
Sbjct: 366 LVKAGDLS 373
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 169/382 (44%), Gaps = 52/382 (13%)
Query: 70 NDIY--NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAG-QWRW--A 124
ND Y N +I ++A+ + + AR +F + D +NA+I + R G QW A
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVF----DIFAAADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 125 MNIMDDMLRAAIPPSRSTYNNLINACGSSGN-----------WKEALNV----------- 162
+NI DM I PS T+ +L+ A S + +K LN+
Sbjct: 439 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 498
Query: 163 -----CKK----MTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTL 213
C K + D DLV N + + + S+ +AL+ F ++ + RPD T
Sbjct: 499 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Query: 214 NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMM 273
++ L + + ++ EC+P + + +++ +Y+ G E+ AF+
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFD-- 614
Query: 274 LAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 333
+V +N+++ +YA HG GK+AL + ++ G P+ +++ +L+A +
Sbjct: 615 --SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLV 672
Query: 334 QKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTL 393
+ FE++ R ++P Y ++ G G L+ A +++ +M +P + +L
Sbjct: 673 EDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT---KPAAIVWRSL 729
Query: 394 LAACGRCSQKGKIETVLSAAQM 415
L+ C + G +E AA+M
Sbjct: 730 LSGCAKA---GNVELAEHAAEM 748
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 215/502 (42%), Gaps = 74/502 (14%)
Query: 88 QARGLFFEMQEWRCKP--DAETY--NALINAHGRAGQWRWAMNIMDDMLRAAIPP-SRST 142
+ R + F++Q + K D + Y LI+ + + G +A + D A+P S T
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFD-----ALPEKSTVT 216
Query: 143 YNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMK 202
+ +I+ C G +L + ++ ++ V PD + +LSA L + E K
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA-------CSILPFLEGGK 269
Query: 203 GTH-------IRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIH 255
H + D + +N++I VK + A +FN M K +++S+T+++
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK------NIISWTTLLS 323
Query: 256 LYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA-HGMGKEALLVFNEIKQNGFR 314
Y + + F M G+KP + + ++++ + A+ H +G + IK N
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 315 PDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAY---GSNGLLDDA 371
V+ SL++ Y + AR VF++ ++V +NA+I+ Y G+ L +A
Sbjct: 384 DSYVT-NSLIDMYAKCDCLTDARKVFDIFA----AADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 372 IKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVA------- 424
+ I R+M I+P++++ +LL A + G + + G+ L+ A
Sbjct: 439 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 498
Query: 425 ------------------------YNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTY 460
+NS Y+ E ++AL L+ ++ + + D T+
Sbjct: 499 YSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Query: 461 TILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
+++ + ++ F +++ L + + +++L Y+K G +A F+
Sbjct: 559 ANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD---- 614
Query: 521 SGCSPDVVTYTSMLDAYTAAGK 542
S S DVV + S++ +Y G+
Sbjct: 615 SAASRDVVCWNSVISSYANHGE 636
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/477 (18%), Positives = 196/477 (41%), Gaps = 24/477 (5%)
Query: 72 IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDM 131
+ N++I + + R+ A LF M + ++ L++ + + + AM + M
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMP----NKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 132 LRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQY 191
+ + P ++++ +C S V +G D N L+ +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 192 SKALSYFELMKGTHIRPDTTTLNIVIHCLVKLR---QYDKAIDIFNSMREKKSECHPDVV 248
+ A F++ D N +I +L + +A++IF MR + P ++
Sbjct: 402 TDARKVFDIFAAA----DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL--IRPSLL 455
Query: 249 SYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEI 308
++ S++ + + + +M G+ I + +AL+ Y+ K++ LVF+E+
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 309 KQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLL 368
K D+V + S+ Y + + ++A +F ++ ++ +P+ ++ ++ A G+ +
Sbjct: 516 KVK----DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571
Query: 369 DDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSA 428
+ ++ + G++ N LL +C +A R + V +NS
Sbjct: 572 QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR----DVVCWNSV 627
Query: 429 IGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKL 488
I SY N GE KAL + + M + I+ + +T+ ++S + L E M+ +
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGI 687
Query: 489 PVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKMNF 545
E Y ++ + G++ +A M + P + + S+L AG +
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPT---KPAAIVWRSLLSGCAKAGNVEL 741
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 11/244 (4%)
Query: 303 LVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAY 362
+V +I G D L+N Y R+ AR VFE + NLVS++ ++ A
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPER----NLVSWSTMVSAC 120
Query: 363 GSNGLLDDAIKILREM-EQDGIQPNVVSICTLLAACGRCSQKGK--IETVLSAAQMRGIK 419
+G+ ++++ + E PN + + + AC +G+ + + S G
Sbjct: 121 NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFD 180
Query: 420 LNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSF 479
+ I YL G D A ++ ++ +K +VT+T +ISG KM + +L
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS----TVTWTTMISGCVKMGRSYVSLQL 236
Query: 480 MEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTA 539
++M + + S++L A S + + + G D ++D+Y
Sbjct: 237 FYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296
Query: 540 AGKM 543
G++
Sbjct: 297 CGRV 300
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 170/421 (40%), Gaps = 60/421 (14%)
Query: 173 PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDI 232
P++ +N L++ F + + + L F ++ + T +V+ + ID+
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 233 FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAY 292
+S+ K H DV + TS++ +YS SG++ + F+ E S+V++ AL Y
Sbjct: 134 -HSLVVKCGFNH-DVAAMTSLLSIYSGSGRLNDAHKLFD----EIPDRSVVTWTALFSGY 187
Query: 293 AAHGMGKEALLVFNEIKQNGFRPD----------------------IVSY---------- 320
G +EA+ +F ++ + G +PD IV Y
Sbjct: 188 TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
Query: 321 ---TSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILRE 377
T+L+N Y + K +KAR VF+ + ++ ++V+++ +I Y SN + I++ +
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFD----SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 378 MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGE 437
M Q+ ++P+ SI L++C E +S N N+ I Y G
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 438 YDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSS 497
+ ++K M++K D V ISG K + + + L + +
Sbjct: 364 MARGFEVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 498 ILCAYSKQGQIVEAESTFNLM----------KSSGCSPDVVTYTSML-DAYTAAGKMNFE 546
+LC G I + FN + + GC D+ ML DAY M
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 547 P 547
P
Sbjct: 480 P 480
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 149/347 (42%), Gaps = 16/347 (4%)
Query: 205 HIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIE 264
H+ DT +N+++ + RQ + +F+ + P++ Y S+I+ + +
Sbjct: 40 HLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQ------FPNIFLYNSLINGFVNNHLFH 93
Query: 265 NCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLL 324
F + G+ ++ ++ A K + + + + + GF D+ + TSLL
Sbjct: 94 ETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLL 153
Query: 325 NAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQ 384
+ Y S + A +F+ I ++V++ AL Y ++G +AI + ++M + G++
Sbjct: 154 SIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 385 PNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGL 444
P+ I +L+AC E ++ + ++ N+ + + Y G+ +KA +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 445 YKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSK 504
+ SM +K D VT++ +I G S E + +M+ L + L + +
Sbjct: 270 FDSMVEK----DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCAS 325
Query: 505 QGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM--NFEPLK 549
G + E +L+ ++ +++D Y G M FE K
Sbjct: 326 LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 169/427 (39%), Gaps = 99/427 (23%)
Query: 104 DAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS--TYNNLINACGSSGNWKEALN 161
D +L++ + +G+ A + D++ P RS T+ L + +SG +EA++
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEI------PDRSVVTWTALFSGYTTSGRHREAID 198
Query: 162 VCKKMTDNGVGPDLVTHNILLSA------FKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+ KKM + GV PD +LSA SG K + E+ K + +R TT +N+
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR--TTLVNL 256
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLY------------------ 257
C + +KA +F+SM EK D+V+++++I Y
Sbjct: 257 YAKC----GKMEKARSVFDSMVEK------DIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 258 --------SVSGQIENC-------------------EAAFNMMLAEGI------------ 278
S+ G + +C E N+ +A +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 279 ---------KPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGR 329
+ IV NA + A +G K + VF + ++ G PD ++ LL
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 330 SQKPQKARGVFEMIK-RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVV 388
+ Q F I LK + Y ++D +G G+LDDA +++ +M ++PN +
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP---MRPNAI 483
Query: 389 SICTLLAACGRCSQKGKIETVLSAAQMRGIK-LNTVAYNSAIGSYLNVGEYDKALGLYKS 447
LL+ C ETVL ++ ++ N Y Y G +D+A +
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLK--ELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDM 541
Query: 448 MRKKKIK 454
M KK +K
Sbjct: 542 MNKKGMK 548
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 166/369 (44%), Gaps = 19/369 (5%)
Query: 179 NILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL--RQYDKAIDIFNSM 236
N L+ +++ ++ +F LM ++PD T V+ KL R +A+ +
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHA--AT 152
Query: 237 REKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHG 296
+ +C D S++ +Y+ +GQ+++ F K SI+ +N L+ Y
Sbjct: 153 LKNFVDC--DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210
Query: 297 MGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYN 356
A +F + + + S+++L+ Y S + +A+ +FE++ + N+VS+
Sbjct: 211 DMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMP----EKNVVSWT 262
Query: 357 ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMR 416
LI+ + G + AI EM + G++PN +I +L+AC + G +
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
Query: 417 GIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEA 476
GIKL+ + + Y GE D A ++ +M K I +++T +I G ++ +A
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI----LSWTAMIQGWAVHGRFHQA 378
Query: 477 LSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMK-SSGCSPDVVTYTSMLD 535
+ +MM+ + V+ ++L A ++ + F+ M+ P + Y ++D
Sbjct: 379 IQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVD 438
Query: 536 AYTAAGKMN 544
AGK+N
Sbjct: 439 LLGRAGKLN 447
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 152/341 (44%), Gaps = 17/341 (4%)
Query: 64 RNYCARND-IYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWR 122
RN RN + N +IR + R + + F M KPD T+ ++ ++ + G +R
Sbjct: 84 RNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG-FR 142
Query: 123 W-AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL 181
W + L+ + +L++ +G K A V ++ D ++ N+L
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 182 LSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKS 241
++ + A + F M ++ + + +I V + ++A +F M EK
Sbjct: 203 INGYCRAKDMHMATTLFRSMP----ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK-- 256
Query: 242 ECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEA 301
+VVS+T++I+ +S +G E + + ML +G+KP+ + A++ A + G
Sbjct: 257 ----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSG 312
Query: 302 LLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
+ + I NG + D T+L++ Y + + A VF N +++S+ A+I
Sbjct: 313 IRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS----NMNHKDILSWTAMIQG 368
Query: 362 YGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQ 402
+ +G AI+ R+M G +P+ V +L AC S+
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/308 (18%), Positives = 122/308 (39%), Gaps = 49/308 (15%)
Query: 73 YNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 132
++ +I+ + +++A+ LF M E + ++ LIN + G + A++ +ML
Sbjct: 230 WSTLIKGYVDSGELNRAKQLFELMPE----KNVVSWTTLINGFSQTGDYETAISTYFEML 285
Query: 133 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVG-------------------- 172
+ P+ T +++AC SG + + + DNG+
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELD 345
Query: 173 -----------PDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 221
D+++ ++ + ++ +A+ F M + +PD V+ +
Sbjct: 346 CAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACL 405
Query: 222 KLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI-ENCEAAFNMMLAEGIKP 280
+ D ++ F+SMR + P + Y ++ L +G++ E E NM I P
Sbjct: 406 NSSEVDLGLNFFDSMRLDYA-IEPTLKHYVLVVDLLGRAGKLNEAHELVENM----PINP 460
Query: 281 SIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF 340
+ ++ AL A AH + A + QN D L +Y K ++G
Sbjct: 461 DLTTWAALYRACKAHKGYRRA----ESVSQNLLELD----PELCGSYIFLDKTHASKGNI 512
Query: 341 EMIKRNKL 348
+ +++ +L
Sbjct: 513 QDVEKRRL 520
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 114/515 (22%), Positives = 223/515 (43%), Gaps = 70/515 (13%)
Query: 40 LIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEW 99
L+ ++ QRGSI N V W ++ +A+ +D+AR LF M E
Sbjct: 64 LLDKIPQRGSI---NRVVYWTS--------------LLSKYAKTGYLDEARVLFEVMPE- 105
Query: 100 RCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEA 159
+ T NA++ + + + A + +M P + ++ ++ A G ++A
Sbjct: 106 ---RNIVTCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDA 157
Query: 160 LNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHC 219
+ + +M + V V+ N L++ KA F+ M D + N +I
Sbjct: 158 VELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKG 209
Query: 220 LVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
++ ++A +F M EK +VV++TS+++ Y G + F E +
Sbjct: 210 YIENDGMEEAKLLFGDMSEK------NVVTWTSMVYGYCRYGDVREAYRLF----CEMPE 259
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQN--GFRPDIVSYTSLLNAYGRSQKPQKAR 337
+IVS+ A++ +A + + +EAL++F E+K++ P+ + SL AY + R
Sbjct: 260 RNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL--AYACGGLGVEFR 317
Query: 338 GVFEMIKRNKLKPNLVSYN-------ALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSI 390
+ E + + + + +L+ Y S+GL+ A +L E D N++
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE-SFDLQSCNII-- 374
Query: 391 CTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRK 450
R + G +E + + + V++ S I YL G+ +A GL++ +
Sbjct: 375 ------INRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD 428
Query: 451 KKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVE 510
K D VT+T++ISG + + EA S + +M+ L YS +L + + +
Sbjct: 429 K----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 511 AESTFNLM-KSSGC-SPDVVTYTSMLDAYTAAGKM 543
+ ++ K++ C PD++ S++ Y G +
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAI 519
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 187/420 (44%), Gaps = 28/420 (6%)
Query: 76 MIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAA 135
++ ++A I A+ L E D ++ N +IN + + G A + + R
Sbjct: 345 LVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNGDLERAETLFE---RVK 395
Query: 136 IPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKAL 195
+ ++ ++I+ +G+ A + +K+ D D VT +++S +++A
Sbjct: 396 SLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAA 451
Query: 196 SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECH-PDVVSYTSII 254
S M ++P +T ++++ D+ I + + K + C+ PD++ S++
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI-HCVIAKTTACYDPDLILQNSLV 510
Query: 255 HLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR 314
+Y+ G IE+ F M ++ VS+N+++ + HG+ +AL +F E+ +G +
Sbjct: 511 SMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKK 566
Query: 315 PDIVSYTSLLNAYGRSQKPQKARGVFEMIKRN-KLKPNLVSYNALIDAYGSNGLLDDAIK 373
P+ V++ +L+A S + +F+ +K ++P + Y ++ID G G L +A +
Sbjct: 567 PNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEE 626
Query: 374 ILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTV---AYNSAIG 430
+ + P+ LL CG + E + A MR ++L+ V + +
Sbjct: 627 FISALP---FTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCN 683
Query: 431 SYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
Y +G +D + K M K +K ++++G + G+ + E + LP+
Sbjct: 684 VYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSA--SEAAQMVLPI 741
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 214/523 (40%), Gaps = 56/523 (10%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
++ ++ L G E +F M +RN + N + +IR + +++A+ +F
Sbjct: 140 SWTVMLTALCDDGRSEDAVELFDEMP-ERNVVSWNTLVTGLIR----NGDMEKAKQVFDA 194
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
M D ++NA+I + A + DM + T+ +++ G+
Sbjct: 195 MP----SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYGD 246
Query: 156 WKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNI 215
+EA + +M + ++V+ ++S F Y +AL F MK D ++
Sbjct: 247 VREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMK-----KDVDAVSP 297
Query: 216 VIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVS------------YTSIIHLYSVSGQI 263
L+ L + + R + H V+S S++H+Y+ SG I
Sbjct: 298 NGETLISLAYACGGLGV--EFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLI 355
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
+ ++ N + S N ++ Y +G + A +F +K D VS+TS+
Sbjct: 356 ASAQSLLNESF------DLQSCNIIINRYLKNGDLERAETLFERVKS---LHDKVSWTSM 406
Query: 324 LNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGI 383
++ Y + +A G+F+ + + V++ +I N L +A +L +M + G+
Sbjct: 407 IDGYLEAGDVSRAFGLFQKLH----DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGL 462
Query: 384 QPNVVSICTLLAACGRCS--QKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKA 441
+P + LL++ G S +GK + A + + NS + Y G + A
Sbjct: 463 KPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA 522
Query: 442 LGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILCA 501
++ M +K D+V++ +I G +AL+ +EM+ + + +L A
Sbjct: 523 YEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 502 YSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKM 543
S G I F MK + P + Y SM+D AGK+
Sbjct: 579 CSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKL 621
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 191/466 (40%), Gaps = 25/466 (5%)
Query: 57 FQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHG 116
F W + RN Y + I + + + AR L E PD++ ++L++ +
Sbjct: 100 FHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALI-ESSLLNSPPDSDLVDSLLDTY- 157
Query: 117 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKE-ALNVCKKMTDNGVGPDL 175
I S +L+ C + + E +V K++ D G +
Sbjct: 158 ------------------EISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSV 199
Query: 176 VTHNILLSAFKSGSQYSKAL-SYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFN 234
+T N L+ + S S+ + +E I P+ T+ I+I L K + + +D+ +
Sbjct: 200 ITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLD 258
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
+ K+ C P V+ TS++ +IE + +L + + + Y+ +V A A
Sbjct: 259 RICGKR--CLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAK 316
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
G A VF+E+ Q GF + YT + ++A + ++ + + P +
Sbjct: 317 EGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDET 376
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
+N LI + G + ++ M G+ P+ + ++ + + + +L+ +
Sbjct: 377 FNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSI 436
Query: 415 MRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYG 474
+G + Y+ I ++ + D+AL L+ M +K+ + LI G C K
Sbjct: 437 DKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVE 496
Query: 475 EALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKS 520
+++ M + + ++Y +++ A+ K G A+ +N M S
Sbjct: 497 AGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/515 (20%), Positives = 232/515 (45%), Gaps = 53/515 (10%)
Query: 65 NYCARNDIY-NMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
+Y R ++ N+++ ++ R+D+AR +F +M E D T+N +I A+ + +
Sbjct: 22 SYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPE----RDEFTWNTMIVAYSNSRR--- 74
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
++ + + R+ + ++N LI+ SG+ EA N+ +M +G+ P+
Sbjct: 75 -LSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPN--------- 124
Query: 184 AFKSGSQYSKALSYFELMKGTHIRP---------DTTTLNIVIHCLVKLRQYDKAIDIFN 234
+ GS S L++G I D +N ++ + ++ +A +F
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 235 SMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAA 294
+M +K+ V++TS++ YS +G F + EG + + ++ +++ A A+
Sbjct: 185 TMEGEKNN-----VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVS 354
+ + V I ++GF+ +I ++L++ Y + ++ + AR + E ++ + ++VS
Sbjct: 240 VSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD----DVVS 295
Query: 355 YNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQ 414
+N++I GL+ +A+ + M + ++ + +I ++L + KI S+A
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIA---SSAH 352
Query: 415 MRGIKLNTVAY----NSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKM 470
+K Y N+ + Y G D AL +++ M I+ D +++T L++G+
Sbjct: 353 CLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM----IEKDVISWTALVTGNTHN 408
Query: 471 SKYGEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQIVEAESTFNLMKSSGCSPDVVTY 530
Y EAL M + K V +S+L A ++ + + SG +
Sbjct: 409 GSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN 468
Query: 531 TSMLDAYTAAGKMN-----FEPLKYEDGF-WKCML 559
S++ YT G + F ++ D W C++
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLI 503
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/569 (20%), Positives = 222/569 (39%), Gaps = 85/569 (14%)
Query: 39 FLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQE 98
L+ +L++ G ++ +F M + + +N MI ++ R+ A LF
Sbjct: 33 LLLGDLSKSGRVDEARQMFDKMPERDEF-----TWNTMIVAYSNSRRLSDAEKLF----- 82
Query: 99 WRCKPDAET--YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 156
R P T +NALI+ + ++G A N+ +M I P+ T +++ C S
Sbjct: 83 -RSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLL 141
Query: 157 KEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIV 216
+ G D+ N LL+ + + S+A FE M+G + T +
Sbjct: 142 LRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG---EKNNVTWTSM 198
Query: 217 IHCLVKLRQYDKAIDIFNSMREKKSECH----PDVVSYTSIIHLYSVSGQIENC------ 266
+ + KAI+ F +R + ++ + P V++ + + V Q+ C
Sbjct: 199 LTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGF 258
Query: 267 -------EAAFNM-----------MLAEGIK-PSIVSYNALVGAYAAHGMGKEALLVFNE 307
A +M L EG++ +VS+N+++ G+ EAL +F
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 308 IKQNGFRPDIVSYTSLLNAYGRSQKPQK-----------------------------ARG 338
+ + + D + S+LN + S+ K RG
Sbjct: 319 MHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRG 378
Query: 339 VFE---MIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLA 395
+ + + ++ +++S+ AL+ NG D+A+K+ M GI P+ + ++L+
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 396 ACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKA 455
A + + V G + NS + Y G + A ++ SM +
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR---- 494
Query: 456 DSVTYTILISGSCKMSKYGEALSFMEEMMHL-KLPVSKEVYSSILCAYSKQGQIVEAEST 514
D +T+T LI G K +A + + M + + E Y+ ++ + + G V+ E
Sbjct: 495 DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQL 554
Query: 515 FNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
+ M+ PD + ++L A G +
Sbjct: 555 LHQME---VEPDATVWKAILAASRKHGNI 580
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 155/378 (41%), Gaps = 55/378 (14%)
Query: 205 HIRPDTTTL--NIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
H D T L N+++ L K + D+A +F+ M E+ D ++ ++I YS S +
Sbjct: 21 HSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPER------DEFTWNTMIVAYSNSRR 74
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRP------- 315
+ + E F + +K +I S+NAL+ Y G EA +F E++ +G +P
Sbjct: 75 LSDAEKLFR---SNPVKNTI-SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 316 ----------------------------DIVSYTSLLNAYGRSQKPQKARGVFEMIKRNK 347
D+ LL Y + ++ +A +FE ++ K
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 348 LKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE 407
N V++ +++ Y NG AI+ R++ ++G Q N + ++L AC S
Sbjct: 191 ---NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 408 TVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGS 467
V G K N ++ I Y E + A L + M D V++ +I G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD----DVVSWNSMIVGC 303
Query: 468 CKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL-CAYSKQGQIVEAESTFNLMKSSGCSPD 526
+ GEALS M + + SIL C + ++ A S L+ +G +
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 527 VVTYTSMLDAYTAAGKMN 544
+ +++D Y G M+
Sbjct: 364 KLVNNALVDMYAKRGIMD 381
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 187/417 (44%), Gaps = 39/417 (9%)
Query: 138 PSRSTY--NNLINACGSSGNWKEALNVCKKMTDNGVG-PDLVTHNILLSAFKSGSQYSKA 194
PS TY N+LI + + E +++ +M G+ PD T +++ + Q
Sbjct: 70 PSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVG 129
Query: 195 LSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSII 254
S L+ D + K + A +F M E+ + VS+T+++
Sbjct: 130 SSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER------NAVSWTALV 183
Query: 255 HLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFR 314
Y SG++E ++ F++M + S+NALV G A +F+E+ +
Sbjct: 184 VAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKR--- 236
Query: 315 PDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKI 374
DI+SYTS+++ Y + AR +FE + ++ +++ALI Y NG ++A K+
Sbjct: 237 -DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR----AWSALILGYAQNGQPNEAFKV 291
Query: 375 LREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLN 434
EM ++P+ + L++A CSQ G E ++N + + + + ++
Sbjct: 292 FSEMCAKNVKPDEFIMVGLMSA---CSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALID 348
Query: 435 V----GEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPV 490
+ G D+A L++ M ++ D V+Y ++ G EA+ E+M+ + V
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI-V 403
Query: 491 SKEVYSSILCAYSKQGQIV-EAESTFNLMK---SSGCSPDVVTYTSMLDAYTAAGKM 543
EV +++ Q ++V E F LM+ S SPD Y+ +++ + GK+
Sbjct: 404 PDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPD--HYSCIVNLLSRTGKL 458
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 165/401 (41%), Gaps = 65/401 (16%)
Query: 92 LFFE--------MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTY 143
LFFE M+ +PD T+ ++ GQ R ++ +LR
Sbjct: 89 LFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVG 148
Query: 144 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKG 203
+ ++ G + A V +M + + V+ L+ A+ + +A S F+LM
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGELEEAKSMFDLMPE 204
Query: 204 THIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQI 263
++ + N ++ LVK A +F+ M ++ D++SYTS+I Y+ G +
Sbjct: 205 RNL----GSWNALVDGLVKSGDLVNAKKLFDEMPKR------DIISYTSMIDGYAKGGDM 254
Query: 264 ENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL 323
+ F A G+ + +++AL+ YA +G EA VF+E+ +PD L
Sbjct: 255 VSARDLFEE--ARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGL 310
Query: 324 LNA-----------------YGRSQKPQKARGVFEMIKRN----------KL-----KPN 351
++A + R K V +I N KL + +
Sbjct: 311 MSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRD 370
Query: 352 LVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLS 411
LVSY ++++ +G +AI++ +M +GI P+ V+ +L CG Q +E L
Sbjct: 371 LVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG---QSRLVEEGLR 427
Query: 412 AAQMRGIKLNTVA----YNSAIGSYLNVGEYDKALGLYKSM 448
++ K + +A Y+ + G+ +A L KSM
Sbjct: 428 YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM 468
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 153/354 (43%), Gaps = 61/354 (17%)
Query: 89 ARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRS--TYNNL 146
AR +F EM E +A ++ AL+ A+ ++G+ A ++ D M P R+ ++N L
Sbjct: 164 ARKVFGEMPE----RNAVSWTALVVAYVKSGELEEAKSMFDLM------PERNLGSWNAL 213
Query: 147 INACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHI 206
++ SG+ A KK+ D D++++ ++ + G A FE +G +
Sbjct: 214 VDGLVKSGDLVNA----KKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDV 269
Query: 207 RPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQIENC 266
R + +I + Q ++A +F+ M K + PD ++ S G E C
Sbjct: 270 R----AWSALILGYAQNGQPNEAFKVFSEMCAKNVK--PDEFIMVGLMSACSQMGCFELC 323
Query: 267 E--------------------AAFNM------------MLAEGIKPSIVSYNALVGAYAA 294
E A +M + E + +VSY +++ A
Sbjct: 324 EKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAI 383
Query: 295 HGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMI-KRNKLKPNLV 353
HG G EA+ +F ++ G PD V++T +L G+S+ ++ FE++ K+ + +
Sbjct: 384 HGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPD 443
Query: 354 SYNALIDAYGSNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIE 407
Y+ +++ G L +A ++++ M + + + +LL G CS G E
Sbjct: 444 HYSCIVNLLSRTGKLKEAYELIKSMP---FEAHASAWGSLL---GGCSLHGNTE 491
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 175/428 (40%), Gaps = 68/428 (15%)
Query: 146 LINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIL---LSAFKSGSQYSKALSYFELMK 202
I AC ++G+ + A +V P+ HN + LS + +S A++ + +
Sbjct: 53 FIEACSNAGHLRYAYSVFTHQP----CPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLW 108
Query: 203 GTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSYTSIIHLYSVSGQ 262
+PDT T V+ V++ V + IH GQ
Sbjct: 109 ALCAKPDTFTFPFVLKIAVRVSD----------------------VWFGRQIH-----GQ 141
Query: 263 IENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTS 322
+ + G S+ L+ Y + G +A +F+E+ D+ + +
Sbjct: 142 V----------VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM----LVKDVNVWNA 187
Query: 323 LLNAYGRSQKPQKARGVFEMIK---RNKLKPNLVSYNALIDAYGSNGLLDDAIKILREME 379
LL YG+ + +AR + EM+ RN+ VS+ +I Y +G +AI++ + M
Sbjct: 188 LLAGYGKVGEMDEARSLLEMMPCWVRNE-----VSWTCVISGYAKSGRASEAIEVFQRML 242
Query: 380 QDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYD 439
+ ++P+ V++ +L+AC E + S RG+ N+ I Y G
Sbjct: 243 MENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 440 KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSIL 499
KAL +++ + ++ + VT+T +I+G EAL+ M+ + + + +IL
Sbjct: 303 KALDVFECVNERNV----VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
Query: 500 CAYSKQGQIVEAESTFNLMKSS-GCSPDVVTYTSMLDAYTAAGKMNFE-------PLKYE 551
A S G + + FN M+S G P++ Y M+D AGK+ P K
Sbjct: 359 SACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKAN 418
Query: 552 DGFWKCML 559
W +L
Sbjct: 419 AAIWGSLL 426
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 153/364 (42%), Gaps = 58/364 (15%)
Query: 71 DIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDD 130
+++N ++ + + +D+AR L M W + ++ +I+ + ++G+ A+ +
Sbjct: 183 NVWNALLAGYGKVGEMDEARSLLEMMPCW--VRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 131 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAFKSGSQ 190
ML + P T +++AC G+ + +C + G+ + +N ++ +
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 191 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY 250
+KAL FE + +VV++
Sbjct: 301 ITKALDVFECVN-----------------------------------------ERNVVTW 319
Query: 251 TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQ 310
T+II + G A FN M+ G++P+ V++ A++ A + G +FN ++
Sbjct: 320 TTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRS 379
Query: 311 N-GFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSNGLLD 369
G P+I Y +++ GR+ K ++A E+IK K N + +L+ A + L+
Sbjct: 380 KYGIHPNIEHYGCMIDLLGRAGKLREAD---EVIKSMPFKANAAIWGSLLAASNVHHDLE 436
Query: 370 DAIKILREMEQDGIQP----NVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAY 425
+ L E+ + ++P N + + L + GR E+ + M+GI + +A
Sbjct: 437 LGERALSELIK--LEPNNSGNYMLLANLYSNLGRWD-----ESRMMRNMMKGIGVKKMAG 489
Query: 426 NSAI 429
S+I
Sbjct: 490 ESSI 493
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 180/468 (38%), Gaps = 71/468 (15%)
Query: 67 CARNDIYNMMIR---LHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRW 123
C ++N MIR L N A ++ ++ KPD T+ ++ R +
Sbjct: 75 CPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWF 134
Query: 124 AMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLS 183
I ++ S LI S G +A +KM D + D+ N LL+
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDA----RKMFDEMLVKDVNVWNALLA 190
Query: 184 AFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSEC 243
+ + +A S E+M +R + + VI K + +AI++F M + E
Sbjct: 191 GYGKVGEMDEARSLLEMMP-CWVR-NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVE- 247
Query: 244 HPDVVSY-----------------------------------TSIIHLYSVSGQIENCEA 268
PD V+ ++I +Y+ SG I
Sbjct: 248 -PDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALD 306
Query: 269 AFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYG 328
F + + ++V++ ++ A HG G EAL +FN + + G RP+ V++ ++L+A
Sbjct: 307 VFECV----NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACS 362
Query: 329 RSQKPQKARGVF-EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREMEQDGIQPNV 387
+ +F M + + PN+ Y +ID G G L +A ++++ M + N
Sbjct: 363 HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP---FKANA 419
Query: 388 VSICTLLAACGRCSQKGKIETVLSAAQMRGIKL---NTVAYNSAIGSYLNVGEYD----- 439
+LLAA E LS IKL N+ Y Y N+G +D
Sbjct: 420 AIWGSLLAASNVHHDLELGERALSEL----IKLEPNNSGNYMLLANLYSNLGRWDESRMM 475
Query: 440 ----KALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEM 483
K +G+ K + I+ ++ Y ISG + ++EM
Sbjct: 476 RNMMKGIGVKKMAGESSIEVENRVYK-FISGDLTHPQVERIHEILQEM 522
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 165/403 (40%), Gaps = 47/403 (11%)
Query: 174 DLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIF 233
D N+++ F S Y +A+ ++ M ++ DT T VI + + ++ I
Sbjct: 94 DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKI- 152
Query: 234 NSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYA 293
++M K DV S+I LY G + E F M + IVS+N+++ Y
Sbjct: 153 HAMVIKLGFV-SDVYVCNSLISLYMKLGCAWDAEKVFEEM----PERDIVSWNSMISGYL 207
Query: 294 AHGMGKEALLVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVF------------- 340
A G G +L++F E+ + GF+PD S S L A P+ + +
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 341 -------------------EMIKRNKLKPNLVSYNALIDAYGSNGLLDDAIKILREM-EQ 380
E I ++ N+V++N +I Y NG + DA ++M EQ
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 381 DGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNTVAYNSAIGSYLNVGEYDK 440
+G+QP+V++ LL A + T+ A RG + V + I Y G+
Sbjct: 328 NGLQPDVITSINLLPASAILEGR----TIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 441 ALGLYKSMRKKKIKADSVTYTILISGSCKMSKYGEALSFMEEMMHLKLPVSKEVYSSILC 500
A ++ M +K + +++ +I+ + K AL +E+ L +SIL
Sbjct: 384 AEVIFDRMAEKNV----ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 501 AYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYTAAGKM 543
AY++ + E + S + + S++ Y G +
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/546 (21%), Positives = 226/546 (41%), Gaps = 67/546 (12%)
Query: 36 NFPFLIKELTQRGSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFE 95
+PF+IK + S+E + M + + + + N +I L+ + A +F E
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHA-MVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 96 MQEWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGN 155
M E D ++N++I+ + G ++ + +ML+ P R + + + AC +
Sbjct: 191 MPE----RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 156 WKEALNV-CKKMTDNGVGPDLVTHNILLSAFKSGSQYSKALSYFELMKGTHIRPDTTTLN 214
K + C + D++ +L + S+Y + +SY E + I+ + N
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMY---SKYGE-VSYAERIFNGMIQRNIVAWN 302
Query: 215 IVIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVSY------------------------ 250
++I C + + A F M E+ PDV++
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNG-LQPDVITSINLLPASAILEGRTIHGYAMRRGF 361
Query: 251 -------TSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALL 303
T++I +Y GQ+++ E F+ M + +++S+N+++ AY +G AL
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRM----AEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 304 VFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYG 363
+F E+ + PD + S+L AY S + R + I +++ N + N+L+ Y
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 364 SNGLLDDAIKILRE-MEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKLNT 422
G L+DA K + +D + N + + + GR S E + S + N
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR-----VNPNK 532
Query: 423 VAYNSAIGSYLNVGEYDKALGLYKSMRKK-KIKADSVTYTILISGSCKMSKYGEALSFME 481
+ S + + G D+ ++SM+++ I Y ++ + + A F+E
Sbjct: 533 STFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 482 EMMHLKLPVSKEVYSSILCAYSKQGQIV----EAESTFNL-MKSSGCSPDVVTYTSMLDA 536
EM +P ++ ++ S+L A I AE F + ++GC Y +L+
Sbjct: 593 EMPF--VPTAR-IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGC------YVLLLNM 643
Query: 537 YTAAGK 542
Y AG+
Sbjct: 644 YAEAGR 649
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 66 YCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
Y + I N ++ ++A ++ AR F + D ++N++I A+ G R ++
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHI----LLKDVVSWNSIIMAYAVHGFGRISV 517
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT-DNGVGPDLVTHNILLSA 184
+ +M+ + + P++ST+ +L+ AC SG E + M + G+ P + + +L
Sbjct: 518 WLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDL 577
Query: 185 FKSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQY-DKAIDIFNSMREKKSEC 243
+S A + E M P T I L R + D I F + + K E
Sbjct: 578 IGRTGNFSAAKRFLEEM------PFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKME- 630
Query: 244 HPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGI 278
H + Y ++++Y+ +G+ E+ +M ++GI
Sbjct: 631 HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 194/454 (42%), Gaps = 75/454 (16%)
Query: 66 YCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAETYNALINAHGRAGQWRWAM 125
+C+ + +M+I L+ + + AR LF + K D ++ A+I+ R G A+
Sbjct: 43 FCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS----KRDVVSWTAMISRFSRCGYHPDAL 98
Query: 126 NIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNILLSAF 185
+ +M R + ++ TY +++ +C G KE + + + +L+ + LLS +
Sbjct: 99 LLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLY 158
Query: 186 KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIDIFNSMREKKSECHP 245
+ +A +L+ F+SM+E+
Sbjct: 159 ARCGKMEEA---------------------------RLQ--------FDSMKER------ 177
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
D+VS+ ++I Y+ + + + F +ML EG KP ++ +L+ A + + L +
Sbjct: 178 DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA----SIVVKCLEIV 233
Query: 306 NEIK----QNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDA 361
+E+ + GF SL+NAY + A + E K K +L+S ALI
Sbjct: 234 SELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTK----KRDLLSCTALITG 289
Query: 362 YG-SNGLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRG--- 417
+ N DA I ++M + + + V + ++L C I +V Q+ G
Sbjct: 290 FSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC------TTIASVTIGRQIHGFAL 343
Query: 418 ----IKLNTVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSKY 473
I+ + NS I Y GE + A+ ++ M++K ++ ++T LI+G + +
Sbjct: 344 KSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVR----SWTSLIAGYGRHGNF 399
Query: 474 GEALSFMEEMMHLKLPVSKEVYSSILCAYSKQGQ 507
+A+ M H ++ + + S+L A S GQ
Sbjct: 400 EKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQ 433
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 151/314 (48%), Gaps = 20/314 (6%)
Query: 246 DVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIKPSIVSYNALVGAYAAHGMGKEALLVF 305
DVVS+T++I +S G + F M E +K + +Y +++ + G KE + +
Sbjct: 77 DVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIH 136
Query: 306 NEIKQNGFRPDIVSYTSLLNAYGRSQKPQKARGVFEMIKRNKLKPNLVSYNALIDAYGSN 365
+++ +++ ++LL+ Y R K ++AR F+ +K + +LVS+NA+ID Y +N
Sbjct: 137 GSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK----ERDLVSWNAMIDGYTAN 192
Query: 366 GLLDDAIKILREMEQDGIQPNVVSICTLLAACGRCSQKGKIETVLSAAQMRGIKL----N 421
D + + + M +G +P+ + +LL R S K ++S IKL +
Sbjct: 193 ACADTSFSLFQLMLTEGKKPDCFTFGSLL----RASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 422 TVAYNSAIGSYLNVGEYDKALGLYKSMRKKKIKADSVTYTILISGSCKMSK-YGEALSFM 480
+ S + +Y+ G A L++ +K+ D ++ T LI+G + + +A
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTKKR----DLLSCTALITGFSQQNNCTSDAFDIF 304
Query: 481 EEMMHLKLPVSKEVYSSIL--CAYSKQGQIVEAESTFNLMKSSGCSPDVVTYTSMLDAYT 538
++M+ +K + + V SS+L C I F L KSS DV S++D Y
Sbjct: 305 KDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFAL-KSSQIRFDVALGNSLIDMYA 363
Query: 539 AAGKMNFEPLKYED 552
+G++ L +E+
Sbjct: 364 KSGEIEDAVLAFEE 377
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 161/412 (39%), Gaps = 98/412 (23%)
Query: 48 GSIEHCNLVFQWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQEWRCKPDAET 107
G +E L F MK +R+ + +N MI + + D + LF M KPD T
Sbjct: 162 GKMEEARLQFDSMK-ERDLVS----WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFT 216
Query: 108 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINA---CGSSGN-WKEALNVC 163
+ +L+ A + ++ S + +L+NA CGS N WK
Sbjct: 217 FGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWK------ 270
Query: 164 KKMTDNGVGPDLVTHNILLSAF-KSGSQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVK 222
+ + DL++ L++ F + + S A F+ M IR T +V+ ++K
Sbjct: 271 --LHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM----IRMKTKMDEVVVSSMLK 324
Query: 223 LRQYDKAIDI---FNSMREKKSECHPDVVSYTSIIHLYSVSGQIENCEAAFNMMLAEGIK 279
+ ++ I + K S+ DV S+I +Y+ SG+IE+ AF M + ++
Sbjct: 325 ICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVR 384
Query: 280 PSIVSYNALVGAYAAHGMGKEALLVFNEIKQNGFRPDIVSYTSL---------------- 323
S+ +L+ Y HG ++A+ ++N ++ +P+ V++ SL
Sbjct: 385 ----SWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKI 440
Query: 324 ----LNAYGRSQKPQKARGVFEMIKRN----------KLKPNLVS-----YNALIDA--- 361
+N +G + + + +M+ R+ + K +VS + A +DA
Sbjct: 441 YDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRR 500
Query: 362 -------------------------------YGSNGLLDDAIKILREMEQDG 382
Y +NG D+A+ + M++ G
Sbjct: 501 HGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552