Miyakogusa Predicted Gene

Lj1g3v4236970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4236970.1 Non Chatacterized Hit- tr|D8SC56|D8SC56_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,30.72,0.00000000004,COMPLEMENT COMPONENT 1-RELATED,NULL;
COMPLEMENT COMPONENT 1,NULL; Mitochondrial glycoprotein
MAM33-l,CUFF.32097.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41600.3 | Symbols:  | Mitochondrial glycoprotein family prot...   187   4e-48
AT2G41600.5 | Symbols:  | Mitochondrial glycoprotein family prot...   187   4e-48
AT2G41600.2 | Symbols:  | Mitochondrial glycoprotein family prot...   128   3e-30
AT2G41600.4 | Symbols:  | Mitochondrial glycoprotein family prot...   128   3e-30
AT2G41600.1 | Symbols:  | Mitochondrial glycoprotein family prot...   128   3e-30
AT1G15870.1 | Symbols:  | Mitochondrial glycoprotein family prot...    61   7e-10
AT5G02050.1 | Symbols:  | Mitochondrial glycoprotein family prot...    59   3e-09
AT1G80720.1 | Symbols:  | Mitochondrial glycoprotein family prot...    58   5e-09
AT3G55605.1 | Symbols:  | Mitochondrial glycoprotein family prot...    56   2e-08
AT4G32605.1 | Symbols:  | Mitochondrial glycoprotein family prot...    54   6e-08
AT4G31930.1 | Symbols:  | Mitochondrial glycoprotein family prot...    50   1e-06
AT2G39795.1 | Symbols:  | Mitochondrial glycoprotein family prot...    47   1e-05

>AT2G41600.3 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:17345597-17346701 REVERSE LENGTH=207
          Length = 207

 Score =  187 bits (476), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 140/221 (63%), Gaps = 28/221 (12%)

Query: 7   LKKGFQAVQDLELLKLLRSEIHFELSENRFQVLSLFLSTTASNIFISLEIHAFSWLQNAE 66
           LK+G +A+++ +LLK+L+SEI  E+S  RFQ                            E
Sbjct: 8   LKRGLKAIENGDLLKILQSEIRHEISHPRFQ--------------------------GVE 41

Query: 67  TGSLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAILGPPYFDKE--LVFPRDVFMKVCV 124
           TGSLG+F +D DS  ++D++L+R+ DSGE+V VSA+L P   + E  LVFPR+   KVC+
Sbjct: 42  TGSLGDFKLDWDSPESQDIVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCI 101

Query: 125 KKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELDINLQDAF 184
           KKP LSSILQF C VYE     S FDI++ YF+ S     SS Y    FS++D  L  A 
Sbjct: 102 KKPGLSSILQFHCRVYESGSGSSHFDIESAYFIRSFVSAPSSTYGDHFFSQVDPKLHSAL 161

Query: 185 KEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVT 225
           ++YLI+KG+  GLTNFLL +L+ +EQ+QYVNWL+++E+ ++
Sbjct: 162 EQYLISKGVSEGLTNFLLCHLNKKEQDQYVNWLRRLESTMS 202


>AT2G41600.5 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:17344747-17346701 REVERSE LENGTH=220
          Length = 220

 Score =  187 bits (476), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 99/221 (44%), Positives = 140/221 (63%), Gaps = 28/221 (12%)

Query: 7   LKKGFQAVQDLELLKLLRSEIHFELSENRFQVLSLFLSTTASNIFISLEIHAFSWLQNAE 66
           LK+G +A+++ +LLK+L+SEI  E+S  RFQ                            E
Sbjct: 8   LKRGLKAIENGDLLKILQSEIRHEISHPRFQ--------------------------GVE 41

Query: 67  TGSLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAILGPPYFDKE--LVFPRDVFMKVCV 124
           TGSLG+F +D DS  ++D++L+R+ DSGE+V VSA+L P   + E  LVFPR+   KVC+
Sbjct: 42  TGSLGDFKLDWDSPESQDIVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCI 101

Query: 125 KKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELDINLQDAF 184
           KKP LSSILQF C VYE     S FDI++ YF+ S     SS Y    FS++D  L  A 
Sbjct: 102 KKPGLSSILQFHCRVYESGSGSSHFDIESAYFIRSFVSAPSSTYGDHFFSQVDPKLHSAL 161

Query: 185 KEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVT 225
           ++YLI+KG+  GLTNFLL +L+ +EQ+QYVNWL+++E+ ++
Sbjct: 162 EQYLISKGVSEGLTNFLLCHLNKKEQDQYVNWLRRLESTMS 202


>AT2G41600.2 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:17345718-17346701 REVERSE LENGTH=164
          Length = 164

 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 97/164 (59%), Gaps = 28/164 (17%)

Query: 7   LKKGFQAVQDLELLKLLRSEIHFELSENRFQVLSLFLSTTASNIFISLEIHAFSWLQNAE 66
           LK+G +A+++ +LLK+L+SEI  E+S  RFQ                            E
Sbjct: 8   LKRGLKAIENGDLLKILQSEIRHEISHPRFQ--------------------------GVE 41

Query: 67  TGSLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAILGPPYFDKE--LVFPRDVFMKVCV 124
           TGSLG+F +D DS  ++D++L+R+ DSGE+V VSA+L P   + E  LVFPR+   KVC+
Sbjct: 42  TGSLGDFKLDWDSPESQDIVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCI 101

Query: 125 KKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVY 168
           KKP LSSILQF C VYE     S FDI++ YF+ S     SS Y
Sbjct: 102 KKPGLSSILQFHCRVYESGSGSSHFDIESAYFIRSFVSAPSSTY 145


>AT2G41600.4 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:17345989-17346701 REVERSE LENGTH=151
          Length = 151

 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 97/164 (59%), Gaps = 28/164 (17%)

Query: 7   LKKGFQAVQDLELLKLLRSEIHFELSENRFQVLSLFLSTTASNIFISLEIHAFSWLQNAE 66
           LK+G +A+++ +LLK+L+SEI  E+S  RFQ                            E
Sbjct: 8   LKRGLKAIENGDLLKILQSEIRHEISHPRFQ--------------------------GVE 41

Query: 67  TGSLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAILGPPYFDKE--LVFPRDVFMKVCV 124
           TGSLG+F +D DS  ++D++L+R+ DSGE+V VSA+L P   + E  LVFPR+   KVC+
Sbjct: 42  TGSLGDFKLDWDSPESQDIVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCI 101

Query: 125 KKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVY 168
           KKP LSSILQF C VYE     S FDI++ YF+ S     SS Y
Sbjct: 102 KKPGLSSILQFHCRVYESGSGSSHFDIESAYFIRSFVSAPSSTY 145


>AT2G41600.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:17345989-17346701 REVERSE LENGTH=151
          Length = 151

 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 97/164 (59%), Gaps = 28/164 (17%)

Query: 7   LKKGFQAVQDLELLKLLRSEIHFELSENRFQVLSLFLSTTASNIFISLEIHAFSWLQNAE 66
           LK+G +A+++ +LLK+L+SEI  E+S  RFQ                            E
Sbjct: 8   LKRGLKAIENGDLLKILQSEIRHEISHPRFQ--------------------------GVE 41

Query: 67  TGSLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAILGPPYFDKE--LVFPRDVFMKVCV 124
           TGSLG+F +D DS  ++D++L+R+ DSGE+V VSA+L P   + E  LVFPR+   KVC+
Sbjct: 42  TGSLGDFKLDWDSPESQDIVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCI 101

Query: 125 KKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVY 168
           KKP LSSILQF C VYE     S FDI++ YF+ S     SS Y
Sbjct: 102 KKPGLSSILQFHCRVYESGSGSSHFDIESAYFIRSFVSAPSSTY 145


>AT1G15870.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr1:5457153-5458245 FORWARD LENGTH=242
          Length = 242

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 15/166 (9%)

Query: 69  SLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAIL---GPPYFDKELVFPRDVFMKVC-- 123
           S G F VD +    + + LRRK    E++ + A +     P        P DV + +   
Sbjct: 85  SFGPFTVD-ERPGEQWISLRRKFGEKEDIKIEATMFDGSVPSSKSTTSDPEDVQLHITFI 143

Query: 124 --VKKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELDINLQ 181
             + K      L+  C  + +T+  + F      F+  S+  S + Y GP F E++  LQ
Sbjct: 144 VNISKGD-GETLEIMCSAWPDTIQITKF------FVRKSSQNSPNAYIGPEFQEMEDELQ 196

Query: 182 DAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVTTK 227
           D+   +L  +GI   L  FL  Y+  +++ +Y+ W++ V+++V  K
Sbjct: 197 DSVYRFLEERGISDDLAEFLHQYMKNKDKAEYIRWMETVKSYVEQK 242


>AT5G02050.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr5:403239-404244 REVERSE LENGTH=267
          Length = 267

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 167 VYRGPLFSELDINLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFV 224
            Y GP F +LD NLQ AF  YL  +GI    T FL  Y+  ++  +Y+ WLK +++FV
Sbjct: 208 AYEGPDFDDLDENLQKAFHRYLEIRGIKPSFTTFLADYVANKDSREYLQWLKDLKSFV 265


>AT1G80720.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr1:30336289-30337347 FORWARD LENGTH=190
          Length = 190

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 21/169 (12%)

Query: 69  SLGEFVVDSDSRRTKDVILRRKCDSGEEVAVSAILGPPYFDKELVFPRDVFMK------- 121
           S G F VD +    + + L+R     E++ + A +    FD+ +   +    +       
Sbjct: 33  SFGPFTVD-ERPGEQWISLKRNFGDKEDIKIEATM----FDRSVPTSKSTKTEPEYILHI 87

Query: 122 ---VCVKKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELDI 178
              V + K   +  L+  C  + +T+  S   I            S S Y GP F ELD 
Sbjct: 88  TFIVNISKAGATEALEIMCSAWPDTIEISKLCI------RRGINTSPSSYGGPEFEELDD 141

Query: 179 NLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVTTK 227
            LQDA  ++L  +GI   L  FL  Y+  + + +YV W++ V+++V  K
Sbjct: 142 QLQDALYQFLEERGISDELAVFLHRYMKNKGKAEYVRWMESVKSYVEQK 190


>AT3G55605.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr3:20622668-20623889 FORWARD LENGTH=258
          Length = 258

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query: 167 VYRGPLFSELDINLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFV 224
            Y GP F ELD N++ +F ++L  +GI    T+FL  Y+  ++  +Y+ WLKK++ FV
Sbjct: 199 TYDGPDFQELDENMRKSFHKFLETRGIKASATDFLYEYMMKKDSREYLLWLKKLKTFV 256


>AT4G32605.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr4:15726429-15727864 REVERSE LENGTH=227
          Length = 227

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 9/117 (7%)

Query: 118 VFMKVCVKKPSLSSILQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSS----VYRGPLF 173
           +F+ V V KP+    L F C +Y +     A  I +V        L  S     Y GP F
Sbjct: 112 LFLHVAVSKPNQPDSLHFLCGLYPD-----ALGIHSVSMRPKLEALEMSDDPTQYTGPSF 166

Query: 174 SELDINLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVTTKESS 230
            ELD  ++D F  +L  +G+   L  FL  +L+ ++    + W K V  FV    S+
Sbjct: 167 EELDEKMRDVFHGFLEERGVNESLFPFLQAWLYVKDHRNLLRWFKSVGTFVHENPSA 223


>AT4G31930.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr4:15449710-15450804 REVERSE LENGTH=234
          Length = 234

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 22/153 (14%)

Query: 85  VILRRKCDSGEEVAVSAILGPPYFDKELVFPR--------DVFMKVC----VKKPSLSSI 132
           ++++ K    E++ + A +    FD  +  PR        DV + +     + K   S  
Sbjct: 91  IVMKGKFGEDEDIKMEATM----FDGFMNVPRAGLDASGHDVRLHISLLVDISKVDGSEE 146

Query: 133 LQFDCEVYEETLHGSAFDIDNVYFLNSSTCLSSSVYRGPLFSELDINLQDAFKEYLIAKG 192
           ++F C V+   +     +I  +Y L  +  ++   Y GP F  L  + Q A +E+L  +G
Sbjct: 147 IEFLCSVWPNRI-----EIRKLYKLRRNK-ITGQPYMGPNFGNLKYDFQTAIREFLRVRG 200

Query: 193 IGLGLTNFLLHYLHTREQEQYVNWLKKVEAFVT 225
           I   L  FL  Y+  +++ + + WL+K+ +F++
Sbjct: 201 IDAELCFFLHEYMMNKDRIELIQWLRKLNSFIS 233


>AT2G39795.1 | Symbols:  | Mitochondrial glycoprotein family protein
           | chr2:16597026-16598028 FORWARD LENGTH=250
          Length = 250

 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 32/55 (58%)

Query: 170 GPLFSELDINLQDAFKEYLIAKGIGLGLTNFLLHYLHTREQEQYVNWLKKVEAFV 224
           GP F +LD NL+  F ++L  +G+    TNFL  Y+  +   +Y  WLK V+ F+
Sbjct: 194 GPDFEDLDENLKKTFYKFLEIRGVKASTTNFLHEYMTRKVNREYFLWLKNVKEFM 248