Miyakogusa Predicted Gene

Lj1g3v4226900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4226900.1 tr|B8KTL2|B8KTL2_9GAMM Glycerol-3-phosphate
dehydrogenase [NAD(P)+] OS=gamma proteobacterium
NOR51-B,25.94,0.000000000000002,coiled-coil,NULL; 6-phosphogluconate
dehydrogenase C-terminal domain-like,6-phosphogluconate
dehydro,CUFF.32093.1
         (459 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41540.3 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase...   806   0.0  
AT2G41540.2 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase...   806   0.0  
AT2G41540.1 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase...   806   0.0  
AT3G07690.1 | Symbols:  | 6-phosphogluconate dehydrogenase famil...   749   0.0  
AT5G40610.1 | Symbols:  | NAD-dependent glycerol-3-phosphate deh...    71   1e-12
AT2G40690.1 | Symbols: GLY1, SFD1 | NAD-dependent glycerol-3-pho...    54   2e-07

>AT2G41540.3 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase
           family protein | chr2:17326801-17328654 FORWARD
           LENGTH=462
          Length = 462

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/451 (87%), Positives = 427/451 (94%), Gaps = 1/451 (0%)

Query: 10  SNGSVQNCN-GLEEKLDDLRKLIGKADGDPLRLVSVGAGAWGSVFAALLQDNYGQFRDKM 68
           SNGSV +    LEEKLD+ R+L+GK++ DPLR+VSVGAGAWGSVFAALLQ++YG FRDK 
Sbjct: 12  SNGSVHHIGLNLEEKLDEFRRLLGKSEKDPLRIVSVGAGAWGSVFAALLQESYGGFRDKF 71

Query: 69  QIRIWRRAGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILK 128
           QIRIWRRAGRAVDR TAEHLFEVINSRED+LRRLIRRCAYLKYVEARLGDRTL+ADEILK
Sbjct: 72  QIRIWRRAGRAVDRETAEHLFEVINSREDILRRLIRRCAYLKYVEARLGDRTLYADEILK 131

Query: 129 DGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPII 188
           DGFCLNM+DTPLCPLKVVTNLQEAVWDADIVVNGLPSTETRE+FEEISKYWKERITVPII
Sbjct: 132 DGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERITVPII 191

Query: 189 ISLSKGIEAALDPVPHIITPTKMINQATGVPMENILYLGGPNIASEVYNKEYANARICGA 248
           ISLSKGIE AL+PVPHIITPTKMI+QATGVP++N+LYLGGPNIA+E+YNKEYANARICGA
Sbjct: 192 ISLSKGIETALEPVPHIITPTKMIHQATGVPIDNVLYLGGPNIAAEIYNKEYANARICGA 251

Query: 249 EKWRKHIAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA 308
            KWRK +AKFLRQP FIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA
Sbjct: 252 AKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA 311

Query: 309 HCTSEMIFITHLLTKEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGTLSPAMGDSISGK 368
           HCTSEMIFITHLL +EPEKLAGPLLADTYVTLLKGRNAWYGQMLAKG ++  MGDSISGK
Sbjct: 312 HCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEINRDMGDSISGK 371

Query: 369 GMIQGVSAVEAFFELLSQSSLNVLHPDENKPVAPVELCPILKTLYKILISREQSSQAILK 428
           GMIQGVSAV AF++LLSQSSL++L  +E KPVAPVE CPILKTLYKILI+REQS+QAIL+
Sbjct: 372 GMIQGVSAVGAFYQLLSQSSLSILPSEEKKPVAPVESCPILKTLYKILITREQSTQAILQ 431

Query: 429 ALRDENLNDPRERIEIAQSHAFYRPSLLGQP 459
           ALRDE LNDPR+RIEIAQSHAFYRPSLLGQP
Sbjct: 432 ALRDETLNDPRDRIEIAQSHAFYRPSLLGQP 462


>AT2G41540.2 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase
           family protein | chr2:17326801-17328654 FORWARD
           LENGTH=462
          Length = 462

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/451 (87%), Positives = 427/451 (94%), Gaps = 1/451 (0%)

Query: 10  SNGSVQNCN-GLEEKLDDLRKLIGKADGDPLRLVSVGAGAWGSVFAALLQDNYGQFRDKM 68
           SNGSV +    LEEKLD+ R+L+GK++ DPLR+VSVGAGAWGSVFAALLQ++YG FRDK 
Sbjct: 12  SNGSVHHIGLNLEEKLDEFRRLLGKSEKDPLRIVSVGAGAWGSVFAALLQESYGGFRDKF 71

Query: 69  QIRIWRRAGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILK 128
           QIRIWRRAGRAVDR TAEHLFEVINSRED+LRRLIRRCAYLKYVEARLGDRTL+ADEILK
Sbjct: 72  QIRIWRRAGRAVDRETAEHLFEVINSREDILRRLIRRCAYLKYVEARLGDRTLYADEILK 131

Query: 129 DGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPII 188
           DGFCLNM+DTPLCPLKVVTNLQEAVWDADIVVNGLPSTETRE+FEEISKYWKERITVPII
Sbjct: 132 DGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERITVPII 191

Query: 189 ISLSKGIEAALDPVPHIITPTKMINQATGVPMENILYLGGPNIASEVYNKEYANARICGA 248
           ISLSKGIE AL+PVPHIITPTKMI+QATGVP++N+LYLGGPNIA+E+YNKEYANARICGA
Sbjct: 192 ISLSKGIETALEPVPHIITPTKMIHQATGVPIDNVLYLGGPNIAAEIYNKEYANARICGA 251

Query: 249 EKWRKHIAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA 308
            KWRK +AKFLRQP FIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA
Sbjct: 252 AKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA 311

Query: 309 HCTSEMIFITHLLTKEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGTLSPAMGDSISGK 368
           HCTSEMIFITHLL +EPEKLAGPLLADTYVTLLKGRNAWYGQMLAKG ++  MGDSISGK
Sbjct: 312 HCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEINRDMGDSISGK 371

Query: 369 GMIQGVSAVEAFFELLSQSSLNVLHPDENKPVAPVELCPILKTLYKILISREQSSQAILK 428
           GMIQGVSAV AF++LLSQSSL++L  +E KPVAPVE CPILKTLYKILI+REQS+QAIL+
Sbjct: 372 GMIQGVSAVGAFYQLLSQSSLSILPSEEKKPVAPVESCPILKTLYKILITREQSTQAILQ 431

Query: 429 ALRDENLNDPRERIEIAQSHAFYRPSLLGQP 459
           ALRDE LNDPR+RIEIAQSHAFYRPSLLGQP
Sbjct: 432 ALRDETLNDPRDRIEIAQSHAFYRPSLLGQP 462


>AT2G41540.1 | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase
           family protein | chr2:17326801-17328654 FORWARD
           LENGTH=462
          Length = 462

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/451 (87%), Positives = 427/451 (94%), Gaps = 1/451 (0%)

Query: 10  SNGSVQNCN-GLEEKLDDLRKLIGKADGDPLRLVSVGAGAWGSVFAALLQDNYGQFRDKM 68
           SNGSV +    LEEKLD+ R+L+GK++ DPLR+VSVGAGAWGSVFAALLQ++YG FRDK 
Sbjct: 12  SNGSVHHIGLNLEEKLDEFRRLLGKSEKDPLRIVSVGAGAWGSVFAALLQESYGGFRDKF 71

Query: 69  QIRIWRRAGRAVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILK 128
           QIRIWRRAGRAVDR TAEHLFEVINSRED+LRRLIRRCAYLKYVEARLGDRTL+ADEILK
Sbjct: 72  QIRIWRRAGRAVDRETAEHLFEVINSREDILRRLIRRCAYLKYVEARLGDRTLYADEILK 131

Query: 129 DGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPII 188
           DGFCLNM+DTPLCPLKVVTNLQEAVWDADIVVNGLPSTETRE+FEEISKYWKERITVPII
Sbjct: 132 DGFCLNMVDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREVFEEISKYWKERITVPII 191

Query: 189 ISLSKGIEAALDPVPHIITPTKMINQATGVPMENILYLGGPNIASEVYNKEYANARICGA 248
           ISLSKGIE AL+PVPHIITPTKMI+QATGVP++N+LYLGGPNIA+E+YNKEYANARICGA
Sbjct: 192 ISLSKGIETALEPVPHIITPTKMIHQATGVPIDNVLYLGGPNIAAEIYNKEYANARICGA 251

Query: 249 EKWRKHIAKFLRQPQFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA 308
            KWRK +AKFLRQP FIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA
Sbjct: 252 AKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFA 311

Query: 309 HCTSEMIFITHLLTKEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGTLSPAMGDSISGK 368
           HCTSEMIFITHLL +EPEKLAGPLLADTYVTLLKGRNAWYGQMLAKG ++  MGDSISGK
Sbjct: 312 HCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEINRDMGDSISGK 371

Query: 369 GMIQGVSAVEAFFELLSQSSLNVLHPDENKPVAPVELCPILKTLYKILISREQSSQAILK 428
           GMIQGVSAV AF++LLSQSSL++L  +E KPVAPVE CPILKTLYKILI+REQS+QAIL+
Sbjct: 372 GMIQGVSAVGAFYQLLSQSSLSILPSEEKKPVAPVESCPILKTLYKILITREQSTQAILQ 431

Query: 429 ALRDENLNDPRERIEIAQSHAFYRPSLLGQP 459
           ALRDE LNDPR+RIEIAQSHAFYRPSLLGQP
Sbjct: 432 ALRDETLNDPRDRIEIAQSHAFYRPSLLGQP 462


>AT3G07690.1 | Symbols:  | 6-phosphogluconate dehydrogenase family
           protein | chr3:2457232-2459378 FORWARD LENGTH=466
          Length = 466

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/449 (78%), Positives = 400/449 (89%), Gaps = 10/449 (2%)

Query: 20  LEEKLDDLRKLIGKADGDPLRLVSVGAGAWGSVFAALLQDNYGQFRDKMQIRIWRRAGRA 79
           +EE+LD++R+++GKAD DPLR+V VGAGAWGSVF A+LQ+NYG+FR K+ +RIWRR GRA
Sbjct: 16  VEERLDEIRRVMGKADDDPLRIVGVGAGAWGSVFIAMLQENYGKFRGKVSVRIWRRGGRA 75

Query: 80  VDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTP 139
           +D+ATAEHLFEVINSRE++LRRLIRRCAYLKYVEARLGDR L+ADEILKDGFCLNMI+TP
Sbjct: 76  IDKATAEHLFEVINSREELLRRLIRRCAYLKYVEARLGDRVLYADEILKDGFCLNMIETP 135

Query: 140 LCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAAL 199
           LCPLKVVTNLQEAVWDADIV+NGLPSTET ++F EISKYWKER+  P+IISL+KG+EA  
Sbjct: 136 LCPLKVVTNLQEAVWDADIVINGLPSTETFQVFNEISKYWKERVNAPVIISLAKGVEAEF 195

Query: 200 DPVPHIITPTKMINQATGVPMENILYLGGPNIASEVYNKEYANARICGAEKWRKHIAKFL 259
           +P P I+TPT+MI++ATG+P+ENILYLGGPNIASEVYNKEYANARICG+EKWRK + KFL
Sbjct: 196 EPHPRIVTPTQMIHRATGIPLENILYLGGPNIASEVYNKEYANARICGSEKWRKPLGKFL 255

Query: 260 RQPQFIVWDNSDLVTHEVMGGLKNVYAIGA----------GMVAALTNESATSKSVYFAH 309
           RQ  FIVWDNSDL+THEVMGGLKNVYAIGA          GMVA LT ESATSKSVYFAH
Sbjct: 256 RQSHFIVWDNSDLITHEVMGGLKNVYAIGAVFVLAFLYSTGMVATLTKESATSKSVYFAH 315

Query: 310 CTSEMIFITHLLTKEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGTLSPAMGDSISGKG 369
           CTSEMIFITHLL KEPEKLAGPLLADTYVTLLKGRNAWYGQ LAKG LS  MGDSI GKG
Sbjct: 316 CTSEMIFITHLLAKEPEKLAGPLLADTYVTLLKGRNAWYGQKLAKGELSLEMGDSIKGKG 375

Query: 370 MIQGVSAVEAFFELLSQSSLNVLHPDENKPVAPVELCPILKTLYKILISREQSSQAILKA 429
           MIQGVSAV+AFFELL+QSSL++ HP+E KPV P ELCPILK LY+ILI+RE S +AIL+A
Sbjct: 376 MIQGVSAVKAFFELLNQSSLSLQHPEEGKPVTPAELCPILKMLYRILITREFSCEAILEA 435

Query: 430 LRDENLNDPRERIEIAQSHAFYRPSLLGQ 458
           LRDE +NDPRE IEIA SH F++P LLGQ
Sbjct: 436 LRDETMNDPRELIEIAHSHLFFQPWLLGQ 464


>AT5G40610.1 | Symbols:  | NAD-dependent glycerol-3-phosphate
           dehydrogenase family protein | chr5:16265071-16267258
           REVERSE LENGTH=400
          Length = 400

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 165/403 (40%), Gaps = 75/403 (18%)

Query: 32  GKADGDPLRLVSVGAGAWGSVFAALLQDN---YGQFRDKMQIRIWRRAGRAVDRATAEHL 88
           G  D    ++  VG+G WGSV A L+  N      F D  ++R+W            E +
Sbjct: 48  GCNDDSKSKVTVVGSGNWGSVAAKLIASNALKLPSFHD--EVRMW----------VFEEV 95

Query: 89  FEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPLCPLKVVTN 148
                   DV+ +      YL  +  +LG R + AD                       +
Sbjct: 96  LPNGEKLNDVINKTNENVKYLPGI--KLG-RNVVAD----------------------PD 130

Query: 149 LQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPI-IISLSKGIEAALDPVPHIIT 207
           L+ AV DA+++V   P     +  + I K    +IT  +  ISL KG+E   +  P +I 
Sbjct: 131 LENAVKDANMLVFVTP----HQFMDGICKKLDGKITGDVEAISLVKGMEVKKEG-PCMI- 184

Query: 208 PTKMINQATGVPMENILYLGGPNIASEVYNKEYANARIC--GAEKWRKHIAKFLRQPQFI 265
            + +I++  G+   N   L G NIA+E+  ++++ A +   G+ +      +    P F+
Sbjct: 185 -SSLISKQLGI---NCCVLMGANIANEIAVEKFSEATVGYRGSREIADTWVQLFSTPYFM 240

Query: 266 VWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLL---T 322
           V    D+   E+ G LKNV AI AG V  L   + T K+        EM  ++ LL    
Sbjct: 241 VTPVHDVEGVELCGTLKNVVAIAAGFVDGLEMGNNT-KAAIMRIGLREMKALSKLLFPSV 299

Query: 323 KEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKG----TLSPAMGDSISGKGMIQGVSAVE 378
           K+        +AD   T L GRN    +  AK     +      + + G+  +QGVS   
Sbjct: 300 KDSTFFESCGVADVITTCLGGRNRRVAEAFAKSRGKRSFDELEAEMLQGQ-KLQGVSTAR 358

Query: 379 AFFELLSQSSLNVLHPDENKPVAPVELCPILKTLYKILISREQ 421
             +E+L             K    +E+ P+  T+++I   R Q
Sbjct: 359 EVYEVL-------------KHCGWLEMFPLFSTVHQICTGRLQ 388


>AT2G40690.1 | Symbols: GLY1, SFD1 | NAD-dependent
           glycerol-3-phosphate dehydrogenase family protein |
           chr2:16974107-16976241 FORWARD LENGTH=420
          Length = 420

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 38/292 (13%)

Query: 147 TNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALDPVPHII 206
           T+ + A+ DAD  ++ +P   +    E I+ Y    +     ISLSKG+E     +   I
Sbjct: 151 TDAKAALLDADYCLHAVPVQFSSSFLEGIADYVDPGLP---FISLSKGLELNTLRMMSQI 207

Query: 207 TPTKMINQATGVPMENILYLGGPNIASEVYNKEYANARICGAE--KWRKHIAKFLRQPQF 264
            P  + N     P +  + L GP+ A E+ N     A +  ++  K    + + L     
Sbjct: 208 IPIALKN-----PRQPFVALSGPSFALELMN-NLPTAMVVASKDKKLANAVQQLLASSYL 261

Query: 265 IVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLTKE 324
            +  +SD+   E+ G LKNV AI AG+V  + N    S +   +   SE+ ++   +  +
Sbjct: 262 RINTSSDVTGVEIAGALKNVLAIAAGIVDGM-NLGNNSMAALVSQGCSEIRWLATKMGAK 320

Query: 325 PEKL-----AGPLLADTYVTLLKGRNAWYGQMLAKGTLSPAMGDSISGKGMI-QGVSAVE 378
           P  +      G ++   +V L   RN   G  L  G     + D ++    + +GV+   
Sbjct: 321 PTTITGLSGTGDIMLTCFVNL--SRNRTVGVRLGSGE---TLDDILTSMNQVAEGVATAG 375

Query: 379 AFFELLSQSSLNVLHPDENKPVAPVELCPILKTLYKILISREQSSQAILKAL 430
           A   L  + ++ +               P+L  + KI+ +    ++A+L+ +
Sbjct: 376 AVIALAQKYNVKL---------------PVLTAVAKIIDNELTPTKAVLELM 412