Miyakogusa Predicted Gene

Lj1g3v4226720.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4226720.1 tr|Q016B4|Q016B4_OSTTA Predicted membrane protein
(ISS) (Fragment) OS=Ostreococcus tauri
GN=Ot06g048,41.18,7e-19,TRANSMEMBRANE PROTEIN 14, 15,Uncharacterised
protein family UPF0136, Transmembrane; Tmemb_14,Unchara,CUFF.32078.1
         (229 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57280.1 | Symbols:  | Transmembrane proteins 14C | chr3:2119...   228   3e-60
AT2G38550.1 | Symbols:  | Transmembrane proteins 14C | chr2:1613...    79   3e-15
AT3G20510.1 | Symbols:  | Transmembrane proteins 14C | chr3:7160...    73   1e-13
AT1G50740.1 | Symbols:  | Transmembrane proteins 14C | chr1:1880...    72   3e-13

>AT3G57280.1 | Symbols:  | Transmembrane proteins 14C |
           chr3:21193960-21195547 FORWARD LENGTH=226
          Length = 226

 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/229 (51%), Positives = 155/229 (67%), Gaps = 13/229 (5%)

Query: 5   MAAAISHPHLCCL---HRSPYLRSRSLTYTPLRSKLSVVMSLERQGADTAGSDAKNSLSY 61
           MA+ IS   L C    +R  + +SRS     +R +  VV S++   ++T  S     LSY
Sbjct: 1   MASQISQ--LACFSSTNRQFHFQSRSFPCPMIRPQSFVVKSVDGNSSETPAS-----LSY 53

Query: 62  AADMTKLHVEEKQEPYSKKDNHDAEKAGL---AEEGVAQQQKKTAKIHDFCLGIPFGGFV 118
            A+++K  VE+  +PYS  D     K  +    EE VA Q  + AKIHDFC GIP+GG V
Sbjct: 54  TAEVSKPVVEKTSKPYSTVDETATNKESITEPVEEDVATQPIRAAKIHDFCFGIPYGGLV 113

Query: 119 LAGGIIGFLFSRSPATLSNGVLYGGALLFLSTFSLKVWKQGKSSLPFILGQAALSGILIW 178
           ++GG++GF FSR+  +LS GVLYGG LL LST SLK+W++GKSS P+ILGQA LS ++ W
Sbjct: 114 VSGGLLGFAFSRNLTSLSTGVLYGGGLLALSTLSLKIWREGKSSFPYILGQAVLSAVVFW 173

Query: 179 KNFQSYSLAKKLFPTGFTAIISSAMLCFYLYVLISGGNPPPKKLKPSAS 227
           KNF +YS+ KKLFP G  A+IS+ MLCFY YV++SGGNPPPKKLKPSA+
Sbjct: 174 KNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGNPPPKKLKPSAT 222


>AT2G38550.1 | Symbols:  | Transmembrane proteins 14C |
           chr2:16132178-16134229 FORWARD LENGTH=335
          Length = 335

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 64/113 (56%)

Query: 100 KKTAKIHDFCLGIPFGGFVLAGGIIGFLFSRSPATLSNGVLYGGALLFLSTFSLKVWKQG 159
           K  ++ +DF +GIP+G  +L GG I F+ S S   +  GV+ GGAL  LS  SLK  ++G
Sbjct: 197 KNVSRANDFHVGIPYGLLLLVGGFINFMVSGSIPAIRFGVILGGALFALSLASLKSHRKG 256

Query: 160 KSSLPFILGQAALSGILIWKNFQSYSLAKKLFPTGFTAIISSAMLCFYLYVLI 212
           +SS  F+ GQ A+  I+  +  +     K  F   FT + S  +L FYLY ++
Sbjct: 257 ESSTKFLKGQMAIVAIIFLRELRLLLSQKSTFLGFFTTLTSGGVLGFYLYKMV 309


>AT3G20510.1 | Symbols:  | Transmembrane proteins 14C |
           chr3:7160884-7161991 FORWARD LENGTH=119
          Length = 119

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 63/117 (53%)

Query: 105 IHDFCLGIPFGGFVLAGGIIGFLFSRSPATLSNGVLYGGALLFLSTFSLKVWKQGKSSLP 164
           +HDFC  IP+G  ++ GG IG++   S  + + G   G  L+     SLK +++ K+S  
Sbjct: 1   MHDFCFTIPYGMLLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTI 60

Query: 165 FILGQAALSGILIWKNFQSYSLAKKLFPTGFTAIISSAMLCFYLYVLISGGNPPPKK 221
            ++ Q  ++  L     Q Y L  K+ P G  A IS+ M CFY+Y + +GGN  P K
Sbjct: 61  AMVLQTVIAAALTLVMGQRYLLTGKIMPAGLVAGISALMTCFYVYKIATGGNKFPAK 117


>AT1G50740.1 | Symbols:  | Transmembrane proteins 14C |
           chr1:18807861-18808765 FORWARD LENGTH=119
          Length = 119

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 65/117 (55%)

Query: 105 IHDFCLGIPFGGFVLAGGIIGFLFSRSPATLSNGVLYGGALLFLSTFSLKVWKQGKSSLP 164
           +HDFC  IP+G  ++ GG IG+L   S A+L+ G   G  ++     SLK +++ K+SL 
Sbjct: 1   MHDFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLL 60

Query: 165 FILGQAALSGILIWKNFQSYSLAKKLFPTGFTAIISSAMLCFYLYVLISGGNPPPKK 221
             L +  ++  L +   Q +   +K+ P    A IS+ M CFY+Y + +GGN  P K
Sbjct: 61  ATLLETVIAAALTFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPK 117