Miyakogusa Predicted Gene

Lj1g3v4226650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4226650.1 Non Chatacterized Hit- tr|I1JN93|I1JN93_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48387
PE,89.36,7e-18,seg,NULL; Glyco_tranf_2_4,NULL; SUBFAMILY NOT
NAMED,NULL; EXTENDED SYNAPTOTAGMIN-RELATED,NULL,CUFF.32071.1
         (264 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57200.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   348   3e-96
AT2G41451.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   325   3e-89
AT3G08550.1 | Symbols: ELD1, ABI8, KOB1 | elongation defective 1...   323   5e-89

>AT3G57200.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT2G41451.1); Has 94 Blast hits to 94 proteins in
           31 species: Archae - 0; Bacteria - 12; Metazoa - 0;
           Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes -
           5 (source: NCBI BLink). | chr3:21169413-21172103 FORWARD
           LENGTH=514
          Length = 514

 Score =  348 bits (892), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 164/227 (72%), Positives = 189/227 (83%), Gaps = 8/227 (3%)

Query: 37  QWRGGVTDDPLTRWSPDHHQFPGMSLSNXXXXXXXXXXXXHHSHPDCASLIANSHSPSFP 96
           QWRGG+ DDP+T WS DHH+FPGM  +               S   C  L+  S SPSFP
Sbjct: 46  QWRGGL-DDPVTHWSIDHHEFPGMVTTQEKRSLRRSV-----SDSGCVDLLGQSRSPSFP 99

Query: 97  YFRDWKPDYSSDLVLSPKICITTSTSAGLEQTLPWIFYHKVMGVSSFFLFVEGKAASPNV 156
           YFR+WK DY SDL   P+ICITTSTSAGLEQTLPWI++HKV+GVS+F+LFVEGKAASPNV
Sbjct: 100 YFRNWKFDYHSDL--KPRICITTSTSAGLEQTLPWIYFHKVIGVSTFYLFVEGKAASPNV 157

Query: 157 SRVLESIPGVKVIYRTRELEEQQAKSRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVM 216
           SRVLE+IPGVKVIYRT+ELEE+QAKSRIWNETWL+SFFYKPCNYELFVKQSLNMEMAI M
Sbjct: 158 SRVLETIPGVKVIYRTKELEEKQAKSRIWNETWLSSFFYKPCNYELFVKQSLNMEMAITM 217

Query: 217 ARDSGMDWILHLDTDELIHPAGTQEYSLRQLLSDVPGDVDMVIFPNY 263
           A+D+GM+WI+HLDTDELIHP+GT EYSLR+LL ++  DVD+VIFPNY
Sbjct: 218 AQDAGMEWIIHLDTDELIHPSGTHEYSLRKLLGNISADVDVVIFPNY 264


>AT2G41451.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; BEST Arabidopsis thaliana protein match is:
           unknown protein (TAIR:AT3G57200.1); Has 30201 Blast hits
           to 17322 proteins in 780 species: Archae - 12; Bacteria
           - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr2:17282957-17285264 FORWARD LENGTH=451
          Length = 451

 Score =  325 bits (832), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 156/227 (68%), Positives = 178/227 (78%), Gaps = 11/227 (4%)

Query: 37  QWRGGVTDDPLTRWSPDHHQFPGMSLSNXXXXXXXXXXXXHHSHPDCASLIANSHSPSFP 96
           QWR GV +D +T+W  D++ FPGM+  +              S   C SL+  S + +FP
Sbjct: 30  QWRSGV-NDSVTQWFDDNYPFPGMATVSEKRSL--------RSDSSCVSLLGQSRTQAFP 80

Query: 97  YFRDWKPDYSSDLVLSPKICITTSTSAGLEQTLPWIFYHKVMGVSSFFLFVEGKAASPNV 156
           Y RD K D+  DL   P+ICITTSTSAGLEQTLPWIFYHKV+GV +F+LFVEG AASPNV
Sbjct: 81  YLRDLKLDHKPDL--KPRICITTSTSAGLEQTLPWIFYHKVIGVETFYLFVEGTAASPNV 138

Query: 157 SRVLESIPGVKVIYRTRELEEQQAKSRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVM 216
           SRVLE+IPGV VIYRTRELEE+QAKSRIWNETWL  FFYKPCNYELFVKQ+LNMEMAI M
Sbjct: 139 SRVLETIPGVNVIYRTRELEEEQAKSRIWNETWLEKFFYKPCNYELFVKQNLNMEMAITM 198

Query: 217 ARDSGMDWILHLDTDELIHPAGTQEYSLRQLLSDVPGDVDMVIFPNY 263
           ARD+GMDWILHLDTDEL+HP+GT+EYSLR LL DVP DVD VIF NY
Sbjct: 199 ARDAGMDWILHLDTDELVHPSGTREYSLRNLLRDVPADVDEVIFTNY 245


>AT3G08550.1 | Symbols: ELD1, ABI8, KOB1 | elongation defective 1
           protein / ELD1 protein | chr3:2596513-2599515 FORWARD
           LENGTH=533
          Length = 533

 Score =  323 bits (829), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 163/238 (68%), Positives = 185/238 (77%), Gaps = 20/238 (8%)

Query: 37  QWRGGVTDDPLT---RWSP--------DHHQFPGMSLSNXXXXXXXXXXXXHHSHPDCAS 85
           QWRGG   DP +   R S         +H  FPGM                H S  DC++
Sbjct: 50  QWRGGGLADPASASVRSSTSVPGGSDLNHEVFPGME------TVSSVSPKSHQSSSDCSN 103

Query: 86  LIANSHSPSFPYFRDWKPDYSSDLVLSPKICITTSTSAGLEQTLPWIFYHKVMGVSSFFL 145
           L A S SPSFPY+ DWK  +  D  L PKICITTSTSAGL+Q LPW+FYHKV+GVS+FFL
Sbjct: 104 L-ARSSSPSFPYYADWK--FGVDTSLKPKICITTSTSAGLDQILPWMFYHKVLGVSTFFL 160

Query: 146 FVEGKAASPNVSRVLESIPGVKVIYRTRELEEQQAKSRIWNETWLASFFYKPCNYELFVK 205
           FVEGKAA+P++S+VLESIPGVKVIYRT+ELEE+QAKSRIWNETWL+SFFYKPCNYELFVK
Sbjct: 161 FVEGKAATPSISKVLESIPGVKVIYRTKELEEKQAKSRIWNETWLSSFFYKPCNYELFVK 220

Query: 206 QSLNMEMAIVMARDSGMDWILHLDTDELIHPAGTQEYSLRQLLSDVPGDVDMVIFPNY 263
           QSLNMEMAIVMARD+GMDWILHLDTDELI+PAG +EYSLR+LL DVP +VDMVIFPNY
Sbjct: 221 QSLNMEMAIVMARDAGMDWILHLDTDELIYPAGAREYSLRRLLLDVPPNVDMVIFPNY 278