Miyakogusa Predicted Gene

Lj1g3v4144840.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4144840.3 Non Chatacterized Hit- tr|C6SWB5|C6SWB5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53426 PE,52,1e-18,
,CUFF.32011.3
         (113 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41200.1 | Symbols:  | unknown protein; Has 26 Blast hits to ...    54   2e-08

>AT2G41200.1 | Symbols:  | unknown protein; Has 26 Blast hits to 26
           proteins in 11 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr2:17171657-17172929 FORWARD LENGTH=161
          Length = 161

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 37  DATINFPEFYRGVCEIVEELNEKRGNTQFKLPETEVLKKAYKYNENHKGKDKALKKSEFK 96
           D   +F +FYR V E VEE+N + G TQ K+P  E L++AY+   ++ G+ K L K EF+
Sbjct: 37  DQEWSFGDFYRIVAEAVEEINRRLGGTQLKVPSVEKLQQAYEI--HNLGQGKKLSKDEFQ 94

Query: 97  EIMKEMV 103
           ++++E++
Sbjct: 95  KLLQEVL 101