Miyakogusa Predicted Gene
- Lj1g3v4140640.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4140640.1 Non Chatacterized Hit- tr|I1JN48|I1JN48_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44466 PE,69.34,0,ATPase
domain of HSP90 chaperone/DNA topoisomerase II/histidine
kinase,ATPase-like, ATP-binding doma,CUFF.32001.1
(273 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04130.1 | Symbols: GYRB2 | DNA GYRASE B2 | chr5:1122084-1128... 241 5e-64
AT5G04130.2 | Symbols: | DNA GYRASE B2 | chr5:1123729-1128031 R... 240 6e-64
AT3G10270.1 | Symbols: GYRB1 | DNA GYRASE B1 | chr3:3173805-3179... 225 3e-59
>AT5G04130.1 | Symbols: GYRB2 | DNA GYRASE B2 | chr5:1122084-1128031
REVERSE LENGTH=732
Length = 732
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 131/172 (76%)
Query: 71 VTPKAYMSSVPAAEPSQKNESSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVY 130
+ A S + E SQ+ +SK Y S+QIQVLEGLDPVRKRPGMYIGSTG RGLHHLVY
Sbjct: 67 IQRNAISSRFLSTEASQETTTSKGYSSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVY 126
Query: 131 EILDNAVDEAQAGFASRIDVVLLADDSVSITDNGRGIPTDMHPTTNKSALETVLTVLHAG 190
EILDNA+DEAQAG+AS++DVVL AD SVS+ DNGRGIPTD+HP T KS+LETVLTVLHAG
Sbjct: 127 EILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDLHPATKKSSLETVLTVLHAG 186
Query: 191 GKFGGAKXXXXXXXXXXXXXXXXXNALSEALEVTVWRDGMEYMQTYSRGKPI 242
GKFGG NALSEALEV+VWRDGME+ Q YSRGKPI
Sbjct: 187 GKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQNYSRGKPI 238
>AT5G04130.2 | Symbols: | DNA GYRASE B2 | chr5:1123729-1128031
REVERSE LENGTH=519
Length = 519
Score = 240 bits (613), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 131/172 (76%)
Query: 71 VTPKAYMSSVPAAEPSQKNESSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVY 130
+ A S + E SQ+ +SK Y S+QIQVLEGLDPVRKRPGMYIGSTG RGLHHLVY
Sbjct: 67 IQRNAISSRFLSTEASQETTTSKGYSSEQIQVLEGLDPVRKRPGMYIGSTGSRGLHHLVY 126
Query: 131 EILDNAVDEAQAGFASRIDVVLLADDSVSITDNGRGIPTDMHPTTNKSALETVLTVLHAG 190
EILDNA+DEAQAG+AS++DVVL AD SVS+ DNGRGIPTD+HP T KS+LETVLTVLHAG
Sbjct: 127 EILDNAIDEAQAGYASKVDVVLHADGSVSVVDNGRGIPTDLHPATKKSSLETVLTVLHAG 186
Query: 191 GKFGGAKXXXXXXXXXXXXXXXXXNALSEALEVTVWRDGMEYMQTYSRGKPI 242
GKFGG NALSEALEV+VWRDGME+ Q YSRGKPI
Sbjct: 187 GKFGGTSSGYSVSGGLHGVGLSVVNALSEALEVSVWRDGMEHKQNYSRGKPI 238
>AT3G10270.1 | Symbols: GYRB1 | DNA GYRASE B1 | chr3:3173805-3179756
REVERSE LENGTH=772
Length = 772
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/173 (69%), Positives = 136/173 (78%), Gaps = 2/173 (1%)
Query: 70 SVTPKAYMSSVPAAEPSQKNESSKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLV 129
+V+PK++MSS E Q++ +SK Y S+ IQVLEGLDPVRKRPGMYIGSTG RGLHHLV
Sbjct: 76 AVSPKSFMSS--TMESLQESSTSKDYSSEHIQVLEGLDPVRKRPGMYIGSTGSRGLHHLV 133
Query: 130 YEILDNAVDEAQAGFASRIDVVLLADDSVSITDNGRGIPTDMHPTTNKSALETVLTVLHA 189
YEILDNA+DEAQAGFAS+IDVVL +DDSVSI+DNGRGIPTD+HP T KS+LETVLTVLHA
Sbjct: 134 YEILDNAIDEAQAGFASKIDVVLHSDDSVSISDNGRGIPTDLHPATGKSSLETVLTVLHA 193
Query: 190 GGKFGGAKXXXXXXXXXXXXXXXXXNALSEALEVTVWRDGMEYMQTYSRGKPI 242
GGKFGG NALSEALEV V RDGME+ Q YSRGKP+
Sbjct: 194 GGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYSRGKPV 246