Miyakogusa Predicted Gene
- Lj1g3v4140620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4140620.1 Non Chatacterized Hit- tr|I1N8R7|I1N8R7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39952
PE,65.07,0,PREDICTED: HYPOTHETICAL PROTEIN,NULL; FAMILY NOT
NAMED,NULL; PPR,Pentatricopeptide repeat; PPR_3,Pen,CUFF.31993.1
(610 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 625 e-179
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 625 e-179
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 625 e-179
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 567 e-162
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 515 e-146
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 3e-41
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 79 7e-15
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 77 5e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 7e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 75 1e-13
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 72 1e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 70 4e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 66 8e-11
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 9e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 65 9e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 62 9e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 6e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 60 7e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 59 1e-08
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 59 1e-08
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 56 8e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 55 2e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 54 3e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-07
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 52 1e-06
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 52 1e-06
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 51 2e-06
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 51 2e-06
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 50 4e-06
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 49 7e-06
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 296/478 (61%), Positives = 384/478 (80%), Gaps = 7/478 (1%)
Query: 137 RKRIE---SELCNKIMDAPGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQ 193
RK +E SEL I+ APG++I +ALDKWVEEG E++R EI++A+ LR+R MYGRALQ
Sbjct: 122 RKTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 194 LSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQ 253
+SEWLE+ K+IE ERDYASR+DL KI GL+K EA ++ IP+S +GEV+YRTLLANCV
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 254 KNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKPSPLTY 313
NVKK+E +FNKMKDL FPL+ F C+Q+LLL+K+ D++KIADVLLLME EN+KPS LTY
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTY 301
Query: 314 NILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEG 373
ILIDVKG + DI+GM+QI++ MK+EG+ELD +T+A+ HY GL+DKAE +LKEMEG
Sbjct: 302 KILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEG 361
Query: 374 ENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEA 433
E+L+ NR + LL +YA+LG+ D+V RIWK+C + PY EE LAAI+A+GKLNK+ EAEA
Sbjct: 362 ESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEA 421
Query: 434 AFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYV 492
FE ++ SS S +LRVY +HKML KGKDLVKRMA+SGCRI TWDA++KLYV
Sbjct: 422 IFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYV 481
Query: 493 EAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYT 552
EAGEVEKADS+L KA++QSH K + +S++ I+++YSKRGD+HN+EKIF +M++AGYT
Sbjct: 482 EAGEVEKADSLLDKASKQSH---TKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYT 538
Query: 553 SRIRQYQVLLQAYIKAKLPAYGIRDRLKGDNIYPNRNLATLLAQVDGFRKTPVSDLLD 610
SR+RQ+Q L+QAYI AK PAYG+RDRLK DNI+PN+++A LAQ D F+KT +SD+LD
Sbjct: 539 SRLRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 296/478 (61%), Positives = 384/478 (80%), Gaps = 7/478 (1%)
Query: 137 RKRIE---SELCNKIMDAPGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQ 193
RK +E SEL I+ APG++I +ALDKWVEEG E++R EI++A+ LR+R MYGRALQ
Sbjct: 122 RKTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 194 LSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQ 253
+SEWLE+ K+IE ERDYASR+DL KI GL+K EA ++ IP+S +GEV+YRTLLANCV
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 254 KNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKPSPLTY 313
NVKK+E +FNKMKDL FPL+ F C+Q+LLL+K+ D++KIADVLLLME EN+KPS LTY
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTY 301
Query: 314 NILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEG 373
ILIDVKG + DI+GM+QI++ MK+EG+ELD +T+A+ HY GL+DKAE +LKEMEG
Sbjct: 302 KILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEG 361
Query: 374 ENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEA 433
E+L+ NR + LL +YA+LG+ D+V RIWK+C + PY EE LAAI+A+GKLNK+ EAEA
Sbjct: 362 ESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEA 421
Query: 434 AFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYV 492
FE ++ SS S +LRVY +HKML KGKDLVKRMA+SGCRI TWDA++KLYV
Sbjct: 422 IFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYV 481
Query: 493 EAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYT 552
EAGEVEKADS+L KA++QSH K + +S++ I+++YSKRGD+HN+EKIF +M++AGYT
Sbjct: 482 EAGEVEKADSLLDKASKQSH---TKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYT 538
Query: 553 SRIRQYQVLLQAYIKAKLPAYGIRDRLKGDNIYPNRNLATLLAQVDGFRKTPVSDLLD 610
SR+RQ+Q L+QAYI AK PAYG+RDRLK DNI+PN+++A LAQ D F+KT +SD+LD
Sbjct: 539 SRLRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust.
Identities = 296/478 (61%), Positives = 384/478 (80%), Gaps = 7/478 (1%)
Query: 137 RKRIE---SELCNKIMDAPGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQ 193
RK +E SEL I+ APG++I +ALDKWVEEG E++R EI++A+ LR+R MYGRALQ
Sbjct: 122 RKTVEKKQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQ 181
Query: 194 LSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQ 253
+SEWLE+ K+IE ERDYASR+DL KI GL+K EA ++ IP+S +GEV+YRTLLANCV
Sbjct: 182 MSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA 241
Query: 254 KNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKPSPLTY 313
NVKK+E +FNKMKDL FPL+ F C+Q+LLL+K+ D++KIADVLLLME EN+KPS LTY
Sbjct: 242 AGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTY 301
Query: 314 NILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEG 373
ILIDVKG + DI+GM+QI++ MK+EG+ELD +T+A+ HY GL+DKAE +LKEMEG
Sbjct: 302 KILIDVKGATNDISGMEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEG 361
Query: 374 ENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEA 433
E+L+ NR + LL +YA+LG+ D+V RIWK+C + PY EE LAAI+A+GKLNK+ EAEA
Sbjct: 362 ESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEA 421
Query: 434 AFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYV 492
FE ++ SS S +LRVY +HKML KGKDLVKRMA+SGCRI TWDA++KLYV
Sbjct: 422 IFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYV 481
Query: 493 EAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYT 552
EAGEVEKADS+L KA++QSH K + +S++ I+++YSKRGD+HN+EKIF +M++AGYT
Sbjct: 482 EAGEVEKADSLLDKASKQSH---TKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYT 538
Query: 553 SRIRQYQVLLQAYIKAKLPAYGIRDRLKGDNIYPNRNLATLLAQVDGFRKTPVSDLLD 610
SR+RQ+Q L+QAYI AK PAYG+RDRLK DNI+PN+++A LAQ D F+KT +SD+LD
Sbjct: 539 SRLRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 567 bits (1462), Expect = e-162, Method: Compositional matrix adjust.
Identities = 293/558 (52%), Positives = 391/558 (70%), Gaps = 18/558 (3%)
Query: 55 FHSLKFNV-CGSRHLSSNAGASSTKGXXXXXXXXXXXXPVAAXXXXXXXXXXXXXXXXGE 113
F+ L ++ G R LSS+AGA +T G G+
Sbjct: 53 FYELSWSSSTGRRSLSSDAGAKTT-GDDDDLEDKNVDLATPDETSSDSEDGEEFSGDEGD 111
Query: 114 EPHDELELSDGETGEPAEKKKAYRKRIESELCNKIMDAPGMAIHTALDKWVEEGKEMSRQ 173
ELEL E+ P+E KA I+ G+++ +ALDKWVE+GK+ +R+
Sbjct: 112 IEGAELELHVPESKRPSEMFKA------------IVSVSGLSVGSALDKWVEQGKDTNRK 159
Query: 174 EISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVET 233
E A+ LRKR M+GRALQ++EWL+ KQ E ERDYA R+DLI+K+ G K EAY++T
Sbjct: 160 EFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKT 219
Query: 234 IPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRK 293
IPES RGE++YRTLLAN V +NV+ AE +FNKMKDL FPL+ F CNQ+L+LYK+ DK+K
Sbjct: 220 IPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKK 279
Query: 294 IADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVG 353
IADVLLL+E EN+KP+ TY ILID KG S DI GM+QIV+ MK EG+ELD++ +A++
Sbjct: 280 IADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIAR 339
Query: 354 HYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVE 413
HY S GL++KAE +LKEMEGE+L++NR +C+ LL +Y L + D+V R+WK+C NP
Sbjct: 340 HYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYN 399
Query: 414 ECLAAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRM 472
E LAAI A+GK++K+ +AEA FE +L +SS S +LRVY +HKM+ +GKDLVK+M
Sbjct: 400 EVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQM 459
Query: 473 ADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSK 532
+DSGC IG LTWDA++KLYVEAGEVEKA+S L KA Q + Q+KPL SS++ ++ +Y +
Sbjct: 460 SDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQ---SKQIKPLMSSFMYLMHEYVR 516
Query: 533 RGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYGIRDRLKGDNIYPNRNLAT 592
RGD+HN+EKIF RMKQAGY SR YQ L+QAY+ AK PAYG+++R+K DNI+PN+ LA
Sbjct: 517 RGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAA 576
Query: 593 LLAQVDGFRKTPVSDLLD 610
LA+ D F+KTP+SDLLD
Sbjct: 577 QLAKADPFKKTPLSDLLD 594
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/496 (52%), Positives = 374/496 (75%), Gaps = 9/496 (1%)
Query: 116 HDELELSDGETGEPAEKKKAYRKRIESELCNKIMDAPGMAIHTALDKWVEEGKEMSRQEI 175
+D+LE+ + + + K +KR +SEL I+ ++ L+KWV+EGK++S+ E+
Sbjct: 122 NDDLEIEEKHSKDGG---KPTKKRGQSELYESIVAYK--SVKHVLEKWVKEGKDLSQAEV 176
Query: 176 SQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIP 235
+ AI LRKR Y LQL EWL + Q EF E +YAS++DL+AK+H LQKAE +++ IP
Sbjct: 177 TLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFLKDIP 236
Query: 236 ESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA 295
ES RGEV+YRTLLANCV K++V KAE+IFNKMK+L FP + FACNQLLLLY +D++KI+
Sbjct: 237 ESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDRKKIS 296
Query: 296 DVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHY 355
DVLLLME EN+KPS TY+ LI+ KGL+ DI GM++IV+ +KEEG+ELD + +++L +Y
Sbjct: 297 DVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSILAKYY 356
Query: 356 ISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEEC 415
I GL+++A+ L+KE+EG+ L+Q WVCR+LLPLYA++G +D+V R+ + NP + C
Sbjct: 357 IRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQNPRYDNC 416
Query: 416 LAAIEAWGKLNKIDEAEAAFEMLSGKTEL-SSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
++AI+AWGKL +++EAEA FE L K ++ A++ +Y +KML KG+DLVKRM +
Sbjct: 417 ISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGN 476
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
+G IGP TW A+VKLY++AGEV KA+ IL +AT+ N+++P+F++Y+AILE+Y+KRG
Sbjct: 477 AGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKD---NKMRPMFTTYMAILEEYAKRG 533
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYGIRDRLKGDNIYPNRNLATLL 594
D+HN+EK+F +MK+A Y +++ QY+ +L AYI AK PAYG+ +R+K DN++PN++LA L
Sbjct: 534 DVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLAAKL 593
Query: 595 AQVDGFRKTPVSDLLD 610
AQV+ F+K PVS LLD
Sbjct: 594 AQVNPFKKCPVSVLLD 609
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 241/476 (50%), Gaps = 13/476 (2%)
Query: 133 KKAYRKRIESELCNKIMDAPG--MAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGR 190
K++ +K IE L N++ G + + L+++++ K + + E+ I LR R +Y
Sbjct: 14 KRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYP 73
Query: 191 ALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLAN 250
AL+LSE +E + + + D A +DL+AK + E Y +PE+ + E+ Y +LL N
Sbjct: 74 ALKLSEVMEERGMNKTVS-DQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLL-N 131
Query: 251 CVQKNNV-KKAEEIFNKMKDLDFPLTAFACNQLLLLYKKN-DKRKIADVLLLMENENVKP 308
C K + +KAE + NKMK+L+ ++ + N L+ LY K + K+ ++ ++ ENV P
Sbjct: 132 CYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMP 191
Query: 309 SPLTYNILIDVKGLSKDIAGMDQIVDKMKEEG-LELDVKTKAVLVGHYISFGLEDKAEAL 367
TYN+ + + DI+G+++++++M +G + D T + + Y+ GL KAE
Sbjct: 192 DSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKA 251
Query: 368 LKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW---KVCVTNPYVEECLAAIEAWGK 424
L+E+E +N +++ + L+ LY LGK +V RIW ++ + L I+ K
Sbjct: 252 LQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVK 311
Query: 425 LNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLT 483
LN + AE F E + + + + ++ YA ++ K +L ++ G ++ T
Sbjct: 312 LNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKT 371
Query: 484 WDAIVKLYVEAGEVEKADSILQKATQQSHANQVK--PLFSSYIAILEQYSKRGDIHNSEK 541
W+ + YV++G++ +A + KA + K P + A++ + ++ D++ +E
Sbjct: 372 WEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAEN 431
Query: 542 IFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYGIRDRLKGDNIYPNRNLATLLAQV 597
+ +K ++ L++ Y A +R RLK +N+ N LL +V
Sbjct: 432 LLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEV 487
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 231/496 (46%), Gaps = 18/496 (3%)
Query: 124 GETGEPAEKKKAY---RKRIESELCNKIMDAPGMAIHTALDKWVEEGKEMSRQEISQAIF 180
G+ GE A KK+ R + L + + + + KW EEG + + E+++ +
Sbjct: 44 GKGGESANKKETVVGGRDTLGGRLLSLVYTKRSAVV--TIRKWKEEGHSVRKYELNRIVR 101
Query: 181 LLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRG 240
LRK Y AL++ EW+ ++ I+ DYA +DLI+KI GL AE + E +P+ +RG
Sbjct: 102 ELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRG 161
Query: 241 EVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL 300
+LL + VQ KAE +F KM + F + N +L +Y + + VL+
Sbjct: 162 HAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIK 221
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
P +TYN+ + D+ G +++ K KEE L D T +VL Y
Sbjct: 222 ELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDN 281
Query: 361 EDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVE----ECL 416
+KA LKEME K+NR +L+ L+ANLG D V WK V + + + E L
Sbjct: 282 VEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWK-KVKSSFKKMNDAEYL 340
Query: 417 AAIEAWGKLNKIDEAEAAF---EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMA 473
+ I A KL + ++A+ + E +SG + N +L Y N ++ G+ +R+
Sbjct: 341 SMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNL--ILAEYMNRDEVLLGEKFYERIV 398
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKR 533
+ G TW+ + Y++ ++EK KA V ++ ++
Sbjct: 399 EKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDSVKKWTVNVRLVK--GACKELEEQ 456
Query: 534 GDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYGIRDRLKGDNIYPNRNLATL 593
G++ +EK+ +++AGY + + Y LL+ Y KA A + +R+ DN+ + L
Sbjct: 457 GNVKGAEKLMTLLQKAGYVN-TQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKEL 515
Query: 594 LAQVDGFRKTPVSDLL 609
+ R T +S +
Sbjct: 516 IRLTSQMRVTEISSTI 531
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 225/459 (49%), Gaps = 13/459 (2%)
Query: 153 GMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYA 212
G+ + +AL W+ +G + ++ AI LRK RAL+L EW+ ++ E +Y+
Sbjct: 78 GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYS 137
Query: 213 SRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDF 272
++ K+HG+ + E +P+ + E++Y L+ C+ + ++ A E KM++L +
Sbjct: 138 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 197
Query: 273 PLTAFACNQLLLLYKKNDKRK-IADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQ 331
+ N+L++ +RK IA L LM+ + P TY+IL+ ++ +I G+ +
Sbjct: 198 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 257
Query: 332 IVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYA 391
D MK+ G+E + + +L + L AEA +E+E N L+ LY
Sbjct: 258 AFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYG 317
Query: 392 NLGKADDVGRIWKVCVTNPYV--EECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKN 448
LGK ++ R W V +V + L A EA+ ++ +D AE + EM + K ++
Sbjct: 318 RLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ 377
Query: 449 CSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWD------AIVKLYVEAGEVEKADS 502
+++L VY ++ K + + M +G + +T+ A KL EA ++ +
Sbjct: 378 FNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEA--LKNIEM 435
Query: 503 ILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLL 562
L T +S + P + ++I+E ++++GD+ NSEK+F +K A Y Y L
Sbjct: 436 GLNLKTSKSIGSST-PWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALF 494
Query: 563 QAYIKAKLPAYGIRDRLKGDNIYPNRNLATLLAQVDGFR 601
+AY+KAK+ + R+ P+ +LL V+ ++
Sbjct: 495 KAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQYK 533
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 205/425 (48%), Gaps = 22/425 (5%)
Query: 152 PGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDY 211
P +I LD W+++G + E+ I +LRK + + ALQ+S+W+ + E E D
Sbjct: 50 PSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDV 109
Query: 212 ASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLD 271
A R+DLIAK+ GL +AE + ETIP R +Y LL K + KAE++F +MK+L
Sbjct: 110 AIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELG 169
Query: 272 FPLTAFACNQLLLLYKKNDKRKIADVLLL-MENENVKPSPLTYNILIDVKGLSKDIAGMD 330
F N +L LY + K + + LL ME+E VKP T N + + D+ GM+
Sbjct: 170 FLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGME 229
Query: 331 QIVDKMK-EEGLELDVKTKAVLVGHYISFGLEDKA-EALLKEMEGENLKQNRWVCRTLLP 388
+ + + + ++GL LD +T A YI GL +KA E L K + N ++ + L+
Sbjct: 230 KFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMS 289
Query: 389 LYANLGKADDVGRIWKVC--VTNPYVEECLAAIEAWGKLNKIDEAEAAFEML-SGKTELS 445
Y GK ++V R+W + + Y ++ I A K++ I+E E E +G +
Sbjct: 290 FYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFD 349
Query: 446 SKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQ 505
+ ++ Y M+ K +++V + TW+ + Y AG++EKA +
Sbjct: 350 IRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWK 409
Query: 506 KATQQS----HANQVKPL-----------FSSYIAILEQYSKRGDIHNSEKIFYRMKQAG 550
+A + S +QV + IL S+RG I + +++ Y M AG
Sbjct: 410 RAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHI-SYDQLLYDMNGAG 468
Query: 551 YTSRI 555
+ +I
Sbjct: 469 LSWKI 473
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 203/430 (47%), Gaps = 22/430 (5%)
Query: 152 PGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDY 211
P +++ L WV+ GK++S E+ + + LR+R + AL++S+W+ F ++
Sbjct: 37 PKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEH 96
Query: 212 ASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLD 271
A +DLI +++G AE Y E + E + + Y LL V++ NV+K+ F KMK++
Sbjct: 97 AVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMG 156
Query: 272 FPLTAFACNQLLLLYKK-NDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMD 330
F ++ N ++ LY K+ VL M+ ENV P +Y I I+ G D+ +
Sbjct: 157 FVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIG 216
Query: 331 QIVDKM-KEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPL 389
+ M + + + +D T AV YI G D+A LLK E K++ L+ L
Sbjct: 217 GTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITL 276
Query: 390 YANLGKADDVGRIW----KVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTEL- 444
YA LGK +V R+W VC ++ L +++ K++ + EAE TE
Sbjct: 277 YARLGKKIEVLRLWDLEKDVC-KRRINQDYLTVLQSLVKIDALVEAEEVL------TEWK 329
Query: 445 SSKNC------SAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVE 498
SS NC + ++R Y M K + +++ +A G P +W+ + Y E G +E
Sbjct: 330 SSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLE 389
Query: 499 KADSILQKATQ-QSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQ 557
A ++ A + + + +P + ++L G + E ++ ++ +
Sbjct: 390 NAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNK-QM 448
Query: 558 YQVLLQAYIK 567
Y L++A I+
Sbjct: 449 YHALVKADIR 458
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 214/445 (48%), Gaps = 11/445 (2%)
Query: 150 DAPGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIER 209
+ P ++ + L + ++ G +S E+ L + N Y ALQ+ EW+E++K IEF
Sbjct: 48 NGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVY 107
Query: 210 DYASRVDLIAKIHGLQKAEAYVETIPE---SLR-GEVIYRTLLANCVQKNNVKKAEEIFN 265
D A R+DLI K HGL++ E Y E + S+R + Y LL V+ VK+AE +
Sbjct: 108 DIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALME 167
Query: 266 KMKDLDFPLTAFACNQLLLLYKKNDK-RKIADVLLLMENENVKPSPLTYNILIDVKGLSK 324
K+ L F +T N+++ LY+ + + K+ V+ +M+ + + L+YN+ ++
Sbjct: 168 KLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVS 227
Query: 325 DIAGMDQIVDKM-KEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVC 383
+A ++ + +M ++ +E+ + L YI G ++KA +L++ E + NR
Sbjct: 228 GVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGY 287
Query: 384 RTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNK---IDEAEAAFEMLSG 440
L+ LYA+LG + V R+W+V + C+ I L K ++EAE F
Sbjct: 288 FFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEA 347
Query: 441 KT-ELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEK 499
+ + + +L Y + + K + L + + G TW+ +++ +V+ +EK
Sbjct: 348 QCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEK 407
Query: 500 ADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQ 559
A + + +P + +AI E + K I + + + G S + Y+
Sbjct: 408 AIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLAS-LPLYR 466
Query: 560 VLLQAYIKAKLPAYGIRDRLKGDNI 584
+LL+ + AK PAY I + +K D +
Sbjct: 467 LLLRMHEHAKRPAYDIYEMMKLDKL 491
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 200/413 (48%), Gaps = 13/413 (3%)
Query: 148 IMDAPGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESK-KQIEF 206
+M+ P + + L++W + G+++++ E+ + + LRK +AL++ +W+ ++ ++
Sbjct: 75 LMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRL 134
Query: 207 IERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNK 266
D A ++DLI K+ G+ AE + +PE+ + +Y +LL V+ + +KAE + N
Sbjct: 135 SASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNT 194
Query: 267 MKDLDFPLTAFACNQLLLLYKK-NDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKD 325
M+D + L N ++ LY + K+ ++ M+ ++++ +YNI + G
Sbjct: 195 MRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGS 254
Query: 326 IAGMDQIVDKMKEE-GLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCR 384
+ M+ + +MK + + + T + + YI G +KAE L+++E +NR
Sbjct: 255 VEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYH 314
Query: 385 TLLPLYANLGKADDVGRIWKVCVT-NPYVEEC--LAAIEAWGKLNKIDEAEAAF-EMLSG 440
LL LY +LG ++ R+W V + P + A + + ++ I+ AE + E L
Sbjct: 315 YLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPV 374
Query: 441 KTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKA 500
K+ + + ++ Y + L + L M + G + TW+ + + + +A
Sbjct: 375 KSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEA 434
Query: 501 DSILQKATQQSHANQVKP---LFSSYIAILEQYSKRGDIHNSEKIFYRMKQAG 550
+ L+ A ++ +P + S + + E+ S D+ + E + ++Q+G
Sbjct: 435 LTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEES---DVTSKEAVLELLRQSG 484
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 149/289 (51%), Gaps = 8/289 (2%)
Query: 153 GMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYA 212
G + L+++V EG + + ++ + LRK RAL++ EW+E +K+I F D+A
Sbjct: 53 GGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME-RKEIAFTGSDHA 111
Query: 213 SRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLL-ANCVQKNNVKKAEEIFNKMKDLD 271
R++LIAK GL+ AE Y ++ +S++ + Y +LL CV+K V KA+ F M DL+
Sbjct: 112 IRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEV-KAKAHFENMVDLN 170
Query: 272 FPLTAFACNQLLLLYKK-NDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMD 330
+ N L+ +Y K+ +++ M+ +++ P +TY++ I G KD+ G++
Sbjct: 171 HVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVE 230
Query: 331 QIVDKMKEEGLEL-DVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPL 389
+++D+MK EG + T A L YI GL KAE LK +E R L+ L
Sbjct: 231 KVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINL 290
Query: 390 YANLGKADDVGRIWKVC---VTNPYVEECLAAIEAWGKLNKIDEAEAAF 435
Y + A +V R+W + N L + A KL+ ID + F
Sbjct: 291 YTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVF 339
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 176/372 (47%), Gaps = 22/372 (5%)
Query: 205 EFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIF 264
E E D A R+DLIAK+ GL +AE + ETIP R +Y LL K + KAE++F
Sbjct: 8 EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVF 67
Query: 265 NKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL-MENENVKPSPLTYNILIDVKGLS 323
+MK+L F N +L LY + K + + LL ME+E VKP T N + +
Sbjct: 68 QEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVV 127
Query: 324 KDIAGMDQIVDKMK-EEGLELDVKTKAVLVGHYISFGLEDKA-EALLKEMEGENLKQNRW 381
D+ GM++ + + + ++GL LD +T A YI GL +KA E L K + N ++ +
Sbjct: 128 SDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 187
Query: 382 VCRTLLPLYANLGKADDVGRIWKVC--VTNPYVEECLAAIEAWGKLNKIDEAEAAFEML- 438
L+ Y GK ++V R+W + + Y ++ I A K++ I+E E E
Sbjct: 188 AYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWE 247
Query: 439 SGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVE 498
+G + + ++ Y M+ K +++V + TW+ + Y AG++E
Sbjct: 248 AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKME 307
Query: 499 KADSILQKATQQS----HANQVKPL-----------FSSYIAILEQYSKRGDIHNSEKIF 543
KA ++A + S +QV + IL S+RG I + +++
Sbjct: 308 KAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHI-SYDQLL 366
Query: 544 YRMKQAGYTSRI 555
Y M AG + +I
Sbjct: 367 YDMNGAGLSWKI 378
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 144/273 (52%), Gaps = 6/273 (2%)
Query: 139 RIESELCNKIMDA--PGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSE 196
+I ++I DA I L++W ++G +++ + I LR + +ALQ+SE
Sbjct: 33 KIHGSCPHRITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSE 92
Query: 197 WLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKN- 255
W+ +K I D+A+R+ LI + GL++AE + E+IP++ RG+ +Y +LL + + +
Sbjct: 93 WMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDK 152
Query: 256 NVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKK-NDKRKIADVLLLMENENVKPSPLTYN 314
+ KAE F KM+DL L N ++ LY ++ K+ ++LL M++ +V+ +T N
Sbjct: 153 TLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVN 212
Query: 315 ILIDVKGLSKDIAGMDQIVDKMKE-EGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEG 373
++ + D+ M++ ++K + G++L+ T + Y+ KA +L+ E
Sbjct: 213 NVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQ 272
Query: 374 -ENLKQNRWVCRTLLPLYANLGKADDVGRIWKV 405
+ K + L+ LY G ++V R+WK+
Sbjct: 273 LVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKL 305
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 129 PAEKKKAYRKRIESELCNKIMDAPGM-------AIHTALDKWVEEGKEMSRQEISQAIFL 181
P YR R +E K+M++ + + L++W G +M ++ I
Sbjct: 353 PTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQW---GDQMKPSDLKCLIKN 409
Query: 182 LRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGE 241
LR + +ALQ+SEW+ K+ DYA+R+ L + GL++AE Y E IPE+++
Sbjct: 410 LRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDY 469
Query: 242 VIYRTLLANCVQ--KNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLL 299
+Y LL++ + KN +EI +M++ + N +L +Y K + ++ +
Sbjct: 470 SVYVALLSSYAKSDKNLGNMVDEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFM 529
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 18/279 (6%)
Query: 152 PGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDY 211
P + T L+KW+ EG +M+ E+ + LR+ Y AL+++EW+ ++ + + DY
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADY 126
Query: 212 ASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLD 271
ASR+DLI+K+ G+ AE Y E + + Y +LL ++AE +F ++ + D
Sbjct: 127 ASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESD 186
Query: 272 -FPLTAFACNQLLLLYKKNDK-RKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGM 329
A N+++ LY + K+ +V+ +++ + V P TYN+ + + +I +
Sbjct: 187 SLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDEL 246
Query: 330 DQIVDKMKEEGLELDVKTKAV-LVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT-LL 387
+I+++M+ + + + + L YI+ AE+ L +++ Q W+ L+
Sbjct: 247 RKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLM 306
Query: 388 PLYANLGKADDVGRIWK--------------VCVTNPYV 412
L+ LG + +IWK +CV + Y+
Sbjct: 307 ILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYL 345
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 214/468 (45%), Gaps = 29/468 (6%)
Query: 148 IMDAPGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFI 207
++ G + L++++ EG + + ++ + LRK A ++ +W+E K+++ F
Sbjct: 79 MLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWME-KRKMTFS 137
Query: 208 ERDYASRVDLIAKIHGLQKAEAYVETI-PESLRGEVIYRTLL-ANCVQKNNVKKAEEIFN 265
D+A +DLI K GL+ AE Y + P + + Y L+ CV+ +KA+ F
Sbjct: 138 VSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEE-EKAKAHFE 196
Query: 266 KMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLL-LMENENVKPSPLTYNILIDVKGLSK 324
M +L+F + N ++ +Y + + + VL+ M+ + P +TY+I + G
Sbjct: 197 IMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLN 256
Query: 325 DIAGMDQIVDKM-KEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVC 383
D+ G+++I+D+M K+ + T + L Y GL +KA++ LK ME + NR
Sbjct: 257 DLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSH 316
Query: 384 RTLLPLYANLGKADDVGRIWK-VCVTNPYVEEC--LAAIEAWGKLNKIDEAEAAFEMLSG 440
L+ LYA + K +V R+W+ + P V L ++A KL +D + F
Sbjct: 317 HFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIF----- 371
Query: 441 KTELSSKNCSAMLRVYANHKM--LMKGK--DLVKRMADSGCR--IGPLTWDAIVKLYVEA 494
TE SK C A AN + +KG + +++ D + GP + A L +
Sbjct: 372 -TEWESK-CWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFS-KARQLLMIHL 428
Query: 495 GEVEKAD---SILQKATQQSHANQVKPLFSSYIAILE--QYSKRGDIHNSEKIFYRMKQA 549
E +KAD L+ A S N+ + +SS + L + K D+ +E F ++
Sbjct: 429 LENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAED-FCKILSN 487
Query: 550 GYTSRIRQYQVLLQAYIKAKLPAYGIRDRLKGDNIYPNRNLATLLAQV 597
L++ Y A+ + +R+RL I + + LL V
Sbjct: 488 WKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKTV 535
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 104/194 (53%), Gaps = 5/194 (2%)
Query: 144 LCNKIMDAPGMA--IHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESK 201
L NK + G+A I L++ ++G ++S + I LR N +AL+ S W+ K
Sbjct: 348 LVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQK 407
Query: 202 KQIEFIERDYASRVDLIAKIHGLQKAEAYVE-TIPESLRGEVIYRTLLANCVQKNNVK-K 259
K DYA+R+ L K+ GL++AE + E +IPE+++ +Y TLL+ + +N + K
Sbjct: 408 KVFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSK 467
Query: 260 AEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL-MENENVKPSPLTYNILID 318
AE +F KM++L N L+ LY K + ++LL M+++N++P +T N ++
Sbjct: 468 AEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLR 527
Query: 319 VKGLSKDIAGMDQI 332
I M+++
Sbjct: 528 ANAYILAIDSMEKV 541
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 182 LRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGE 241
LR N +AL++S+W+ +K E D+++R L K+ L++AE + E+IPE++R E
Sbjct: 85 LRSSNRPRQALEVSDWMVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKFFESIPENMRFE 143
Query: 242 VIYRTLLANCVQKNN---VKKAEEIFNKMKDLDFPLTAFACNQLLLLYKK-NDKRKIADV 297
+Y +LL + +++ +KKAE +F KMK L L N + LY ++ K+ ++
Sbjct: 144 SMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVDEI 203
Query: 298 LLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
L M+ NV+ +T N + V D+A MD+ + K E LD T + Y
Sbjct: 204 LREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRK-EITRLDGLTMLAMAKAY-- 260
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW 403
L+ LY G+ +DV R+W
Sbjct: 261 ---------------------------ELMSLYGEAGEIEDVHRVW 279
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 184/423 (43%), Gaps = 22/423 (5%)
Query: 158 TALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIE--FIERDYASRV 215
+ + K EEG EMS S + K G A W + K+I Y +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKA---GHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 216 DLIAKIHGLQKAEAYV-ETIPESLRGEV-IYRTLLANCVQKNNVKKAEEIFNKMKDLDFP 273
+ +++AEA V E E + + IY T++ + KK +F ++K+ F
Sbjct: 422 YAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFT 481
Query: 274 LTAFACNQLLLLYKKNDK-RKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQI 332
T L+ LY K K K +V +M+ E VK + TY+++I+ KD A +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 333 VDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYAN 392
+ M +EG++ DV ++ + G D+A +KEM+ ++R RT +P+
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK---LRHRPTTRTFMPIIHG 598
Query: 393 LGKADDVGRIWKV------CVTNPYVEECLAAIEAWGKLNKIDEA-EAAFEMLSGKTELS 445
K+ D+ R +V C P V I + ++++A E EM +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 446 SKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQ 505
+ +++ YA+ K + R+ + G + T++A++K ++G ++ A ++
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV-- 716
Query: 506 KATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
T++ A + Y +++ +++RGD+ + + +MK+ G I Y + A
Sbjct: 717 --TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 566 IKA 568
KA
Sbjct: 775 SKA 777
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/432 (19%), Positives = 180/432 (41%), Gaps = 82/432 (18%)
Query: 232 ETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKD--LDFPLTAFACNQLLLLYKK- 288
+T+ S+ G++IY A+C Q N+++AE + +M++ +D P+ + + ++ Y
Sbjct: 410 KTLNASIYGKIIY----AHC-QTCNMERAEALVREMEEEGIDAPIAIY--HTMMDGYTMV 462
Query: 289 NDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTK 348
D++K V ++ P+ +TY LI++ I+ ++ MKEEG++ ++KT
Sbjct: 463 ADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTY 522
Query: 349 AVLVGHYISFGLEDKAEALLKEMEGENLK------------------------------- 377
++++ ++ A A+ ++M E +K
Sbjct: 523 SMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK 582
Query: 378 -QNRWVCRTLLPLYANLGKADDVGRIWKV------CVTNPYVEECLAAIEAWGKLNKIDE 430
++R RT +P+ K+ D+ R +V C P V I + ++++
Sbjct: 583 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 431 A-EAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVK 489
A E EM + + +++ YA+ K + R+ + G + T++A++K
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 490 LYVEAGEVEKADSILQKAT-------------------------------QQSHANQVKP 518
++G ++ A ++ ++ + QQ VKP
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 519 LFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP--AYGIR 576
+Y + + SK GD++ + + M+ G I+ Y L++ + +A LP A
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 577 DRLKGDNIYPNR 588
+ +K I P++
Sbjct: 823 EEMKAMGIKPDK 834
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 130/322 (40%), Gaps = 43/322 (13%)
Query: 287 KKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVK 346
++ D + + M + P+ Y LI + +D+ V KMKEEG+E+ +
Sbjct: 321 RRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLV 380
Query: 347 TKAVLVGHYISFGLED-----------------------------------KAEALLKEM 371
T +V+VG + G + +AEAL++EM
Sbjct: 381 TYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREM 440
Query: 372 EGENLKQNRWVCRTLLPLY---ANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKI 428
E E + + T++ Y A+ K V + K C P V I + K+ KI
Sbjct: 441 EEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKI 500
Query: 429 DEA-EAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAI 487
+A E + M + + K S M+ + K + + M G + + ++ I
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 488 VKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMK 547
+ + G +++A +++ + H +P +++ I+ Y+K GD+ S ++F M+
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRH----RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 548 QAGYTSRIRQYQVLLQAYIKAK 569
+ G + + L+ ++ +
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKR 638
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY-KKNDKRKIADVLLLME 302
Y LL C + ++ A + +M + P +F N L+ + ++ D + AD++ M+
Sbjct: 697 YEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK 756
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
E VKP TY I + D+ Q +++M+ G++ ++KT L+ + L +
Sbjct: 757 KEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPE 816
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLY---ANLGKADDVGRIWKVCV------------ 407
KA + +EM+ +K ++ V LL A++ +A + +C
Sbjct: 817 KALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMG 876
Query: 408 TNPYVEECLAAIEAWG 423
T + +CL IEA G
Sbjct: 877 TAVHWSKCLCKIEASG 892
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 147/337 (43%), Gaps = 19/337 (5%)
Query: 244 YRTLLANCV---------QKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDK-RK 293
Y+++L N V ++ V A +FN +++ F L ++ L+ + + + R+
Sbjct: 167 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 294 IADVLLLMENENVKPSPLTYNILIDVKG-LSKDIAGMDQIVDKMKEEGLELDVKTKAVLV 352
+V ME + KP+ +TYN++++V G + + +V+KMK +G+ D T L+
Sbjct: 227 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 353 GHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN--- 409
L +A + +EM+ ++ LL +Y + + ++ V N
Sbjct: 287 TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 410 PYVEECLAAIEAWGKLNKIDEA-EAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDL 468
P + + I A+ + +DEA E +M T+ + +L + + +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 469 VKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILE 528
+ M ++GC+ T++A +K+Y G+ + + K + + + P ++ +L
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTE----MMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
+ + G +F MK+AG+ + L+ AY
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 139/328 (42%), Gaps = 13/328 (3%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLLME 302
Y TL+ C + + ++A ++F +MK F N LL +Y K+ + K A VL M
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
PS +TYN LI + ++ ++M E+G + DV T L+ + G +
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW---KVCVTNPYVEECLAAI 419
A ++ +EM K N + +Y N GK ++ +I+ VC +P + +
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 420 EAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCR 478
+G+ E F EM + + ++ Y+ + + +RM D+G
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Query: 479 IGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHN 538
T++ ++ G E+++ +L + + KP +Y ++L Y+ +I
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEMED----GRCKPNELTYCSLLHAYANGKEI-- 575
Query: 539 SEKIFYRMKQAGYTSRIRQYQVLLQAYI 566
+ + + + Y+ I VLL+ +
Sbjct: 576 --GLMHSLAEEVYSGVIEPRAVLLKTLV 601
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 142/332 (42%), Gaps = 17/332 (5%)
Query: 280 NQLLLLYKKND-KRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKE 338
N LL ++ +N +++ V M+ P T+N LI + +M +
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 339 EGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYAN---LGK 395
G+ D+ T ++ G+ +++E +L EME K N +LL YAN +G
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 396 ADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGK---TELSSKNCSAM 452
+ V P + K + + EAE AF L + ++++ N +M
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN--SM 635
Query: 453 LRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSH 512
+ +Y +M+ K ++ M + G T+++++ ++ + + K++ IL++
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL---- 691
Query: 513 ANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL-- 570
A +KP SY ++ Y + + ++ +IF M+ +G + Y + +Y +
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 571 PAYGIRDRLKGDNIYPNRNLATLLAQVDGFRK 602
A G+ + PN+N T + VDG+ K
Sbjct: 752 EAIGVVRYMIKHGCRPNQN--TYNSIVDGYCK 781
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 142/328 (43%), Gaps = 14/328 (4%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMEN 303
Y T++ + +K+A E F +M + T N ++ +Y N + L+
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 304 ENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELD-VKTKAVLVGHYISFGLED 362
+ P TYNILI + + DI +MK++GL+ D V + +L I +E+
Sbjct: 361 LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE 420
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV-----CVTNPYVEECLA 417
AE L+ EM+ +N++ + + L +Y +A+ + + W N E A
Sbjct: 421 -AEGLIAEMDDDNVEIDEYTQSALTRMYV---EAEMLEKSWSWFKRFHVAGNMSSEGYSA 476
Query: 418 AIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGC 477
I+A+G+ + EAE F + + + M++ Y K K +L + M G
Sbjct: 477 NIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Query: 478 RIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIH 537
T++ +V++ A K L+K + + + P Y A++ + K G ++
Sbjct: 537 TPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP----YCAVISSFVKLGQLN 592
Query: 538 NSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
+E+++ M + + Y VL+ A+
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 171/376 (45%), Gaps = 14/376 (3%)
Query: 186 NMYGRALQLSEWLESKKQIEFI----ERDYASRVDLIAKIHGLQKAEAYV-ETIPESLRG 240
++YG QL E K ++ R Y + L K + +++A AY E + L+
Sbjct: 341 HIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKP 400
Query: 241 E-VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLL 299
+ V YRTLL ++ V++AE + +M D + + + + L +Y + + + +
Sbjct: 401 DPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWF 460
Query: 300 LMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFG 359
+ S Y+ ID G ++ +++ +E ++ ++ + IS
Sbjct: 461 KRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKS 520
Query: 360 LEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW-KVCVTNPYVEECL-- 416
E KA L + M + ++ TL+ + A+ GR + + YV +C+
Sbjct: 521 CE-KACELFESMMSYGVTPDKCTYNTLVQILAS-ADMPHKGRCYLEKMRETGYVSDCIPY 578
Query: 417 -AAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
A I ++ KL +++ AE + EM+ E ++ +A+ + + V+ M +
Sbjct: 579 CAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKE 638
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
+G + +++++KLY + G +++A++I +K Q + Q +++S ++ YS+R
Sbjct: 639 AGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN-CMINLYSERS 697
Query: 535 DIHNSEKIFYRMKQAG 550
+ +E IF MKQ G
Sbjct: 698 MVRKAEAIFDSMKQRG 713
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 173/429 (40%), Gaps = 73/429 (17%)
Query: 156 IHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRV 215
+ AL W E R + +L+++ + RA+++ EW +SK E Y
Sbjct: 141 VEDALSPWAE------RLSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHY---- 190
Query: 216 DLIAKIHGLQKAEAYVETI-PESLRGEV-----IYRTLLANCVQKNNVK-KAEEIFNKMK 268
+++ +I G YV+++ E +R + Y TL+ + K +K A KM
Sbjct: 191 NIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI-DVYSKGGLKVHALCWLGKMS 249
Query: 269 DLDFPLTAFACNQLLLLYKKNDKRKIADVLL----LMENE---NVKPSPLTYNILIDVKG 321
+ +L +YKK + + A+ EN+ +V S TYN +ID G
Sbjct: 250 KIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYG 309
Query: 322 LSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRW 381
S I + +M EEG +V ++F
Sbjct: 310 KSGQIKEASETFKRMLEEG----------IVPTTVTF----------------------- 336
Query: 382 VCRTLLPLYANLGKADDVGRIWKV----CVTNPYVEECLAAIEAWGKLNKIDEAEAAF-E 436
T++ +Y N G+ +V + K C + L ++ K N I+ A A F E
Sbjct: 337 --NTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHT--KNNDIERAGAYFKE 392
Query: 437 MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGE 496
M + + +L ++ M+ + + L+ M D I T A+ ++YVEA
Sbjct: 393 MKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEM 452
Query: 497 VEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIR 556
+EK+ S ++ + + Y A ++ Y +RG + +E++F ++ + I
Sbjct: 453 LEKSWSWFKRFHVAGNMSS-----EGYSANIDAYGERGYLSEAERVFICCQEVNKRTVI- 506
Query: 557 QYQVLLQAY 565
+Y V+++AY
Sbjct: 507 EYNVMIKAY 515
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 155/359 (43%), Gaps = 14/359 (3%)
Query: 257 VKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLLMENENVKPSPLTYNI 315
V A+ IF + T +A + L+ Y ++ + A V M+ ++P+ +TYN
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 316 LIDVKGLSK-DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGE 374
+ID G + + + D+M+ G++ D T L+ GL + A L EM
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 375 NLKQNRWVCRTLLPLYANLGKADDVGRI---WKVCVTNPYVEECLAAIEAWGKLNKIDEA 431
++Q+ + TLL G+ D I V P V I+ + K + DEA
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 432 EAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKL 490
F EM L + + +L +Y + D+++ MA G + +T++A++
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 491 YVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAG 550
Y + G+ ++ + + ++ V P +Y +++ YSK G + +IF K AG
Sbjct: 489 YGKQGKYDEVKKVFTEMKRE----HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 551 YTSRIRQYQVLLQAYIKAKL--PAYGIRDRLKGDNIYPNRNLATLLAQVDGFRKTPVSD 607
+ + Y L+ A K L A + D + + I P N+ T + +D F ++ D
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP--NVVTYNSIIDAFGRSATMD 601
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 146/326 (44%), Gaps = 25/326 (7%)
Query: 247 LLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLLMENEN 305
LL C K + +I + L CN L+++Y +N K +++ V M++ N
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 306 VKPSPLTYNILIDVK---GLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
+ ++N ++ G D G+ +D+M+ GL+ D+ T L+ Y S GL
Sbjct: 155 LS----SWNSILSSYTKLGYVDDAIGL---LDEMEICGLKPDIVTWNSLLSGYASKGLSK 207
Query: 363 KAEALLKEMEGENLKQNRWVCRTLL-----PLYANLGKADDVGRIWKVCVTNPYVEECLA 417
A A+LK M+ LK + +LL P + LGKA + + YVE L
Sbjct: 208 DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTL- 266
Query: 418 AIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGC 477
I+ + K + A F+M+ K ++ + + L YA +L + L+ RM G
Sbjct: 267 -IDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS-YAC--LLKDAEALMIRMEKEGI 322
Query: 478 RIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIH 537
+ +TW+++ Y G+ EKA ++ K ++ V P S+ AI SK G+
Sbjct: 323 KPDAITWNSLASGYATLGKPEKALDVIGKMKEKG----VAPNVVSWTAIFSGCSKNGNFR 378
Query: 538 NSEKIFYRMKQAGYTSRIRQYQVLLQ 563
N+ K+F +M++ G LL+
Sbjct: 379 NALKVFIKMQEEGVGPNAATMSTLLK 404
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 152/334 (45%), Gaps = 13/334 (3%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLL 300
V TL+ K V +A + ++M + F +L K+ +A D+
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMD--QIVDKMKEEGLELDVKTKAVLVGHYISF 358
ME N+K S + Y+I+ID L KD + D + ++M+ +G++ DV T + L+G +
Sbjct: 236 MEERNIKASVVQYSIVID--SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL-- 416
G D +L+EM G N+ + L+ ++ GK + ++ +T + +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 417 -AAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
+ I+ + K N + EA F+ M+S E S ++ Y K + G L + ++
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
G +T++ +V + ++G++ A + Q+ + V P +Y +L+ G
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG----VPPSVVTYGILLDGLCDNG 469
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
+++ + +IF +M+++ T I Y +++ A
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 198/505 (39%), Gaps = 75/505 (14%)
Query: 141 ESELCNKIMDAPGMAIHTALDKWVEEGK-EMSRQEISQAIFLLRKRNMYGRALQLSEWLE 199
E L N I++ P T L ++ + K E+ R ++ + L + RA+ L EWL
Sbjct: 108 EVVLVNSIVEQP----LTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLV 163
Query: 200 SKKQIEFIERDYASRVDLIAKIHGLQK----AEAYVETIP--ESLRGEVIYRTLLANCVQ 253
++ D+ +++ +I G + A ++ IP E L Y T+L +
Sbjct: 164 LSSNSGALKLDHQV-IEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSR 222
Query: 254 KNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDK--RKIADVLLLMENENVK---- 307
+KA ++F +MK++ T N +L ++ K + RKI VL M ++ +K
Sbjct: 223 TGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEF 282
Query: 308 -------------------------------PSPLTYNILIDVKGLSKDIAGMDQIVDKM 336
P +TYN L+ V G + ++ +M
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 337 KEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKA 396
+E D T LV Y+ G +A +++ M + + N T++ Y GK
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 397 DDVGRIWKV-----CVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCS- 450
D+ +++ CV N A + GK ++ + EM+ ++ S CS
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYN--AVLSLLGKKSRSN------EMIKMLCDMKSNGCSP 454
Query: 451 ------AMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSIL 504
ML + N M + + M G T++ ++ Y G A +
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 505 QKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
+ T+ V ++Y A+L +++GD + E + MK G+ Y ++LQ
Sbjct: 515 GEMTRAGFNACV----TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Query: 565 YIKAK--LPAYGIRDRLKGDNIYPN 587
Y K L I +R+K I+P+
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPS 595
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 147/370 (39%), Gaps = 56/370 (15%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLD-FPLTAFACNQLLLLYKKNDKRKIADVLLL 300
+ Y T++ + +A ++F MK+ P T L LL KK+ ++ +L
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDK----MKEEGLELDVKTKAVLVGHYI 356
M++ P+ T+N ++ + G GMD+ V++ MK G E D T L+ Y
Sbjct: 447 MKSNGCSPNRATWNTMLALCG----NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 357 SFGLEDKA-----------------------------------EALLKEMEGENLKQNRW 381
G E A E ++ +M+ + K
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 382 VCRTLLPLYANLGKADDVGRI---WKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEML 438
+L YA G + RI K P + A K + +E AF +
Sbjct: 563 SYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF 622
Query: 439 SG---KTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAG 495
K ++ N +ML ++ + M + + +++ + + G +T+++++ +YV G
Sbjct: 623 KKHGYKPDMVIFN--SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 496 EVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRI 555
E KA+ IL+ + +Q+KP SY +++ + +RG + + ++ M + G I
Sbjct: 681 ECWKAEEILKTLEK----SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCI 736
Query: 556 RQYQVLLQAY 565
Y + Y
Sbjct: 737 FTYNTFVSGY 746
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 115/271 (42%), Gaps = 11/271 (4%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKN-DKRKIADVLLLME 302
Y LL +K + + E + + MK F T + + +L Y K + I + ++
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
+ PS + L+ + +AG ++ K+ G + D+ ++ + + D
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLYANLG---KADDVGRIWKVCVTNPYVEECLAAI 419
+AE +L+ + + L + +L+ +Y G KA+++ + + P + I
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 420 EAWGKLNKIDEAEAAFEMLSGKTELSSKNC----SAMLRVYANHKMLMKGKDLVKRMADS 475
+ + + + EA MLS TE + C + + Y M + +D+++ MA +
Sbjct: 709 KGFCRRGLMQEA---VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Query: 476 GCRIGPLTWDAIVKLYVEAGEVEKADSILQK 506
CR LT+ +V Y AG+ +A + K
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 165/373 (44%), Gaps = 29/373 (7%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY----KKNDKRKIADV 297
+ + ++ + N++ A + KMK+L T N L+ Y K ++ D+
Sbjct: 116 IFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDL 175
Query: 298 LLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
+L N +V P+ T+N+L+ K + ++V KM+E G+ D T + Y+
Sbjct: 176 MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Query: 358 FGLEDKAEALLKE--MEGENLKQNRWVCRTLLPLYANLGKADDVGRIWK----------V 405
G +AE+ + E + E K N C ++ Y G+ D R + +
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 406 CVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKG 465
V N + + ++ G IDE + + K ++ + S ++ +++ + K
Sbjct: 296 VVFNSLINGFVEVMDRDG----IDEVLTLMKECNVKADVITY--STVMNAWSSAGYMEKA 349
Query: 466 KDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIA 525
+ K M +G + + + K YV A E +KA+ +L+ +S N V +F++ I+
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVV--IFTTVIS 407
Query: 526 ILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP--AYGIRDRLKGDN 583
+ G + ++ ++F +M + G + I+ ++ L+ Y++ K P A + ++G
Sbjct: 408 ---GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 464
Query: 584 IYPNRNLATLLAQ 596
+ P + LLA+
Sbjct: 465 VKPENSTFLLLAE 477
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 144/340 (42%), Gaps = 38/340 (11%)
Query: 287 KKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVK 346
K+N + +L M + P LT L+ + S + + + +K GL D K
Sbjct: 396 KENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEK 455
Query: 347 TKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRI---W 403
++ Y++ G E L+KEM+ + LK + V LL YA +G A+ I
Sbjct: 456 IYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSM 515
Query: 404 KVCVTNPYVEECLAA-IEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSA-MLRVYANHKM 461
+ P E + +EA+GK ++D+A++ F+ + C A ++R Y
Sbjct: 516 QYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENS 575
Query: 462 LMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFS 521
L K L+ ++ G IG +T+ +V G +E+A+ +L K +Q A P F
Sbjct: 576 LDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEA----PPFE 631
Query: 522 SYIAILEQYS-----------------KRGDIHNSE--KIFYRMKQAGYTSRIRQYQVLL 562
+++ YS KR + +E K+ +K+ G+ R+ +
Sbjct: 632 LQVSLCCMYSGVRNEKKTLQALGVLEAKRDQMGPNEFDKVISALKRGGFEKDARR----M 687
Query: 563 QAYIKAK--LPAYGIRDRLKGDNIYPNRNLATLLAQVDGF 600
Y++A+ LP+ RL+ D + P R + +V F
Sbjct: 688 YKYMEARKFLPS----QRLQMDMVAPPRAFGSGSGRVRRF 723
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 146/347 (42%), Gaps = 46/347 (13%)
Query: 276 AFACNQLLLLY-KKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVD 334
A+ N ++ Y K+ D + VL +M+ + V + +TY +L+++ + ++ +++ D
Sbjct: 259 AYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318
Query: 335 KMKEEGLELDVK-----------------------------------TKAVLVGHYISFG 359
+M+E G+E DV T L+ G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 360 LEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPY---VEECL 416
AE L+ EM+ + + + V TL+ Y G D+ I+ V + V C
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 417 AAIEAWGKLNKIDEAEA-AFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADS 475
+ +L + DEA+ F M+ G +LS+ + + ++ VY + + K L M+
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 476 GCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGD 535
G + +T++ ++ Y + G++++A +K AN + P +Y +++ +
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEA----RKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 536 IHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP--AYGIRDRLK 580
+ + ++F M G Y V++ KA A+G+ D +K
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/343 (18%), Positives = 139/343 (40%), Gaps = 44/343 (12%)
Query: 262 EIFNKMKDLDFPLTAFACNQLLL-LYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVK 320
EIF +M D +T ++ ++ L ++ + K ++ + +KP TYN +I+
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 321 GLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQN- 379
+D +G++ ++ MK++G+ + T +L+ + G AE L EM ++ +
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 380 -------RWVCRT-----------------LLPLYANLGK-ADDVGRIWKVCVTNPYVEE 414
W CR L P G D V ++ ++ + E
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 415 CLAA------------IEAWGKLNKIDEAEAAFEMLSGKT-ELSSKNCSAMLRVYANHKM 461
+ I+ + + +DEA ++++ K + C+ + + K
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 462 LMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFS 521
+ K + RM + G ++ +++ ++ +Y + G VE+A + + + + V+P
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG----VQPNAI 505
Query: 522 SYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
+Y ++ Y K+G I + K+ M+ G Y L+
Sbjct: 506 TYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 185/462 (40%), Gaps = 49/462 (10%)
Query: 182 LRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGE 241
L R R L + + S + +++A R D + + + + P E
Sbjct: 86 LPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPN----E 141
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLL 300
IY +++ ++ + K E+F++M + F+ L+ Y +N + + + ++L
Sbjct: 142 HIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDR 201
Query: 301 MENENVKPSPLTYNILIDV---KGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
M+NE + PS LTYN +I+ GL D G+ + +M+ EG++ D+ T L+
Sbjct: 202 MKNEKISPSILTYNTVINACARGGL--DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN---PYVEE 414
GL D+AE + + M + + L+ + L + + V + + P +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 415 CLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMA 473
+EA+ K I EA F +M + ++ S +L ++ + L M
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 474 DSGCRIGPLTWDAIVKLYVEAG-------------------EVEKADSIL---------- 504
S T++ +++++ E G ++E + I+
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 505 --QKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLL 562
+K Q AN + P +Y ++E + + + F M + G I + LL
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 563 QAYIKAKL--PAYGIRDRLKGDNIYPNRNLATLLAQVDGFRK 602
++ + L + I RL I NR+ T AQ++ +++
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRD--TFNAQIEAYKQ 539
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 149/363 (41%), Gaps = 40/363 (11%)
Query: 211 YASRVDLIAKIHGLQKAEAYVETIPE--SLRGEVIYRTLLANCVQKNNVKKAEEIFNKMK 268
Y+ V+ K+ L+K + + SL Y LL + ++K+A +F++M+
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 269 DLDFPLTAFACNQLLLLYKKNDKRK-IADVLLLMENENVKPSPLTYNILIDVKGLSKDIA 327
A + LL L+ ++ + + + L M++ N P TYNILI+V G
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 328 GMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLL 387
+ + M EE +E D++T ++ GL + A +L+ M
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM---------------- 448
Query: 388 PLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFE-MLSGKTELSS 446
A+D+ P + IEA+G+ +EA AF M + S
Sbjct: 449 -------TANDI---------VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 447 KNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQK 506
+ ++L +A ++ + + ++ R+ DSG T++A ++ Y + G+ E+A K
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA----VK 548
Query: 507 ATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYI 566
++ P + A+L YS + + F MK + I Y ++L Y
Sbjct: 549 TYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYG 608
Query: 567 KAK 569
K +
Sbjct: 609 KTE 611
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 120/253 (47%), Gaps = 6/253 (2%)
Query: 156 IHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRV 215
+ LD+W++ GK+++ + I L + + ALQ+SEW+ + + D+ASR+
Sbjct: 49 VTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFASRL 108
Query: 216 DLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLA-NCVQKNNVKKAEEIFNKMKDLDFPL 274
L+ GL++AE + ++IPE++R + ++ TLL+ + K +AE + M+ + L
Sbjct: 109 CLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNMLL 168
Query: 275 TAFACNQLLLLYKKNDKRKIADVLL--LMENENVKPSPLTYNILIDVKGLSKDIAGMDQI 332
+ ++ LY ++ + D +L + EN LT N ++ D+ M+
Sbjct: 169 KPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEMF 228
Query: 333 VD--KMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEME-GENLKQNRWVCRTLLPL 389
+ +++E L +T + Y+ G KA +L+ E + K + L+ +
Sbjct: 229 LMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDSANKVLMMM 288
Query: 390 YANLGKADDVGRI 402
Y + G D R+
Sbjct: 289 YWDAGAKQDASRL 301
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 144/330 (43%), Gaps = 13/330 (3%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLL-LYKKNDKRKIADVLLL 300
V +LL N + A + +M ++ + +F N L+ L++ N + ++
Sbjct: 152 VTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDR 211
Query: 301 MENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
M + +P +TY I+ V GL K DI ++ KM++ +E V ++ ++
Sbjct: 212 MVVKGCQPDLVTYGIV--VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEEC 415
+ A L EM+ + ++ N +L+ N G+ D R+ + NP V
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 416 LAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
A I+A+ K K+ EAE + EM+ + S+++ + H L + K + + M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
C +T++ ++K + +A V++ + ++ +Q+ +Y ++ + +
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT----VTYTTLIHGFFQAR 445
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
+ N++ +F +M G I Y +LL
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 127/294 (43%), Gaps = 20/294 (6%)
Query: 285 LYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELD 344
L K+ D +L ME ++P + YN +ID K++ + +M +G+ +
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 345 VKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWK 404
V T L+ ++G A LL +M + N L+ + GK + +++
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 405 VCV---TNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNC-------SAMLR 454
+ +P + + I + +++DEA+ FE+ + SK+C + +++
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL------MISKDCFPNVVTYNTLIK 404
Query: 455 VYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHAN 514
+ K + +G +L + M+ G +T+ ++ + +A E + A Q +Q ++
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA----QIVFKQMVSD 460
Query: 515 QVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
V P +Y +L+ G + + +F ++++ I Y ++++ KA
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 158/368 (42%), Gaps = 16/368 (4%)
Query: 208 ERDYASRVDLIAKIHGLQKAEAYVETIPESLRGE--VIYRTLLANCVQKNNVKKAEEIFN 265
E Y++ VD + + L+ A ++ T G V + ++++ + V A+ F
Sbjct: 187 EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 266 KMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL---MENENVKPSPLTYNILIDVKGL 322
+ + ++ N +L+ IA+ L L M V+P +TYNIL L
Sbjct: 247 TVLKCGLVPSVYSHN--ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 323 SKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWV 382
I+G +++ M ++GL DV T +L+ G D LLK+M + N +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 383 -CRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLA---AIEAWGKLNKIDEAEAAFEML 438
C +L G+ D+ ++ + + +A I KL K D A ++ +
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 439 SGKTEL-SSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEV 497
K L +S+ A+L ML++ + L+ + SG + + ++ ++ Y ++G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 498 EKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQ 557
E+A + + + + P +++ +++ Y K +I + KI +K G +
Sbjct: 485 EEALELFKVVIETG----ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 558 YQVLLQAY 565
Y L+ AY
Sbjct: 541 YTTLMDAY 548
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 133/291 (45%), Gaps = 8/291 (2%)
Query: 284 LLYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLEL 343
L+ +K + + DV M+ + KP+ TYN++I++ G + ++ +M+ +
Sbjct: 238 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 297
Query: 344 DVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW 403
++ T LV + GL +KAE + ++++ + L+ + +V L+ Y+ G I+
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 404 KVCV---TNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANH 459
+ P ++A+G+ +AEA F EM + K+ +L Y+
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 460 KMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPL 519
+ + K + +VK M+++G ++++ LY G+ K + IL + +
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI--- 474
Query: 520 FSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL 570
S+Y ++ Y K G + E++F +K+ + + + + AY + KL
Sbjct: 475 -STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 524
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 26/305 (8%)
Query: 230 YVETIPESLRGEVIYRTLLANCVQKNNV-KKAEEIFNKMKDLDFPLTAFACNQLLLLYKK 288
Y E + + T L N + + +KAEEIF ++++ + N L+ Y +
Sbjct: 287 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 346
Query: 289 ND-KRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKT 347
A++ LM++ +P +YNI++D G + + + + ++MK G+ +K+
Sbjct: 347 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 406
Query: 348 KAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV 407
+L+ Y K EA++KEM ++ + +V ++L LY LG+ + +I
Sbjct: 407 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 466
Query: 408 TNPYVEECLAAIEA-------WGKLNKIDEAEAAFEMLSGKTELSSKNC-------SAML 453
P C A I +GK ++ E F EL KN ++ +
Sbjct: 467 NGP----CTADISTYNILINIYGKAGFLERIEELF------VELKEKNFRPDVVTWTSRI 516
Query: 454 RVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHA 513
Y+ K+ +K ++ + M DSGC T ++ +VE+ S+L+ +
Sbjct: 517 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTV 576
Query: 514 NQVKP 518
+ + P
Sbjct: 577 SSLVP 581
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 166/396 (41%), Gaps = 50/396 (12%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY----KKNDKRKIADV 297
+ + ++ + N++ A + KMK+L T N L+ Y K ++ D+
Sbjct: 116 IFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDL 175
Query: 298 LLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
+L N +V P+ T+N+L+ K + ++V KM+E G+ D T + Y+
Sbjct: 176 MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Query: 358 FGLEDKAEALLKE--MEGENLKQNRWVCRTLLPLYANLGKADDVGRIWK----------V 405
G +AE+ + E + E K N C ++ Y G+ D R + +
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 406 CVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELS--------------SKNC-- 449
V N + + ++ G IDE ++S E+ K C
Sbjct: 296 VVFNSLINGFVEVMDRDG----IDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNV 351
Query: 450 -------SAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADS 502
S ++ +++ + K + K M +G + + + K YV A E +KA+
Sbjct: 352 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 411
Query: 503 ILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLL 562
+L+ +S N V +F++ I+ + G + ++ ++F +M + G + I+ ++ L+
Sbjct: 412 LLETLIVESRPNVV--IFTTVIS---GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM 466
Query: 563 QAYIKAKLP--AYGIRDRLKGDNIYPNRNLATLLAQ 596
Y++ K P A + ++G + P + LLA+
Sbjct: 467 WGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAE 502
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 122/274 (44%), Gaps = 8/274 (2%)
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
+ +KP YN L+ + + + +V +M++ G+ D T ++L+ Y++ G
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 361 EDKAEALLKEMEGENLKQNRWVCRTLLPLYANLG---KADDVGRIWKVCVTNPYVEECLA 417
+ A +LKEME +++ N +V LL + + G K V + K P +
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 418 AIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSG 476
I+ +GK N +D A F+ MLS E + ++ + H + +++ + M G
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 477 CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDI 536
C T++ ++ Y G+ E+ D +++ + + + P ++ +++ Y K G
Sbjct: 510 CLPCATTYNIMINSY---GDQERWDD-MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 537 HNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL 570
+++ + MK G Y L+ AY + L
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 262 EIFNKMKDLDFPLTAF-------------ACNQLLLLYKKNDKRKIADVLL-LMENENVK 307
+ F K LD +T F N L+ + K+ + +A+ + ME
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 308 PSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEAL 367
P TYNI+I+ G + M +++ KMK +G+ +V T LV Y G + A
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 368 LKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLA---AIEAWGK 424
L+EM+ LK + + L+ YA G ++ ++V ++ LA I A+G+
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 425 LNKIDEAEAAFEML 438
+ EA A + +
Sbjct: 632 DRRDAEAFAVLQYM 645
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 173/387 (44%), Gaps = 32/387 (8%)
Query: 182 LRKRNMY------GRALQLSEWLESKKQIEFIERDYASRVD-LIAKIHGLQKAEAYVETI 234
+R+RN++ G + + W E K + +D D L KI LQ +
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKI--LQGCANCGDVE 198
Query: 235 PESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAF---------ACNQLLLL 285
+ V+ + +++C++ +N A ++ K +LDF F A N +LL
Sbjct: 199 AGKVIHSVVIKLGMSSCLRVSNSILA--VYAKCGELDFATKFFRRMRERDVIAWNSVLLA 256
Query: 286 YKKNDKRKIA-DVLLLMENENVKPSPLTYNILID-VKGLSKDIAGMDQIVDKMKEEGLEL 343
Y +N K + A +++ ME E + P +T+NILI L K A MD ++ KM+ G+
Sbjct: 257 YCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD-LMQKMETFGITA 315
Query: 344 DVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW 403
DV T ++ I G+ +A + ++M + N + + + L + +
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 404 KVCVTNPYVEECLAA---IEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHK 460
+ V ++++ L ++ + K K+++A F+ + K + ++M+ Y
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTW---NSMITGYCQAG 432
Query: 461 MLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLF 520
K +L RM D+ R +TW+ ++ Y++ G+ +A + Q+ + +V+
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG---KVQRNT 489
Query: 521 SSYIAILEQYSKRGDIHNSEKIFYRMK 547
+++ I+ Y + G + ++F +M+
Sbjct: 490 ATWNLIIAGYIQNGKKDEALELFRKMQ 516
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 9/270 (3%)
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
M V+P +TYNIL L I+G +++ M ++GL DV T +L+ G
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 361 EDKAEALLKEMEGENLKQNRWV-CRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLA-- 417
D LLK+M + N + C +L G+ D+ ++ + + +A
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 418 -AIEAWGKLNKIDEAEAAFEMLSGKTEL-SSKNCSAMLRVYANHKMLMKGKDLVKRMADS 475
I KL K D A ++ + K L +S+ A+L ML++ + L+ + S
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 476 GCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGD 535
G + + ++ ++ Y ++G +E+A + + + + P +++ +++ Y K +
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG----ITPSVATFNSLIYGYCKTQN 518
Query: 536 IHNSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
I + KI +K G + Y L+ AY
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 133/291 (45%), Gaps = 8/291 (2%)
Query: 284 LLYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLEL 343
L+ +K + + DV M+ + KP+ TYN++I++ G + ++ +M+ +
Sbjct: 260 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 319
Query: 344 DVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW 403
++ T LV + GL +KAE + ++++ + L+ + +V L+ Y+ G I+
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 404 KVCV---TNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANH 459
+ P ++A+G+ +AEA F EM + K+ +L Y+
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 460 KMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPL 519
+ + K + +VK M+++G ++++ LY G+ K + IL + +
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI--- 496
Query: 520 FSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL 570
S+Y ++ Y K G + E++F +K+ + + + + AY + KL
Sbjct: 497 -STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 546
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 26/305 (8%)
Query: 230 YVETIPESLRGEVIYRTLLANCVQKNNV-KKAEEIFNKMKDLDFPLTAFACNQLLLLYKK 288
Y E + + T L N + + +KAEEIF ++++ + N L+ Y +
Sbjct: 309 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 368
Query: 289 ND-KRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKT 347
A++ LM++ +P +YNI++D G + + + + ++MK G+ +K+
Sbjct: 369 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 428
Query: 348 KAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV 407
+L+ Y K EA++KEM ++ + +V ++L LY LG+ + +I
Sbjct: 429 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 488
Query: 408 TNPYVEECLAAIEA-------WGKLNKIDEAEAAFEMLSGKTELSSKNC-------SAML 453
P C A I +GK ++ E F EL KN ++ +
Sbjct: 489 NGP----CTADISTYNILINIYGKAGFLERIEELF------VELKEKNFRPDVVTWTSRI 538
Query: 454 RVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHA 513
Y+ K+ +K ++ + M DSGC T ++ +VE+ S+L+ +
Sbjct: 539 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTV 598
Query: 514 NQVKP 518
+ + P
Sbjct: 599 SSLVP 603
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY-KKNDKRKIADVLLLM 301
IY L++ Q A + K+K+ F L A N L+ L+ KN+ K+ ++L M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Query: 302 ENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLE 361
E E KP +TYN LI G KD +++++++M+E+GL+ V T ++ Y S G
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 362 DKAEALLKEME-GENLKQNRWVCRTLLPLYA---NLGKADDVGRIWKVCVTNPYVEECLA 417
D+A L K+M + N + L+ ++ N G+A + K+ + P VE A
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 418 AIEAWGKLNKIDEAEAAFEMLSGKTELS 445
+ LN+ + E +++ E S
Sbjct: 693 LFKC---LNEKTQGETLLKLMDEMVEQS 717
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 141/337 (41%), Gaps = 44/337 (13%)
Query: 238 LRGEVIYRTLLANCVQKNN-VKKAEEIFNKM--KDLD----FPLTAFACNQLLLLYKKND 290
+R +V+ +L N + K+ V +A E+F KM K D + N L+ K
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 291 KRKIADVLLLMEN--ENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTK 348
+ K A+ LL+ E P+ +TYN LID + + ++V +MKE+ ++ +V T
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 349 AVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVT 408
+VG + A +ME E +K N TL+ C +
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI----------------HACCS 488
Query: 409 NPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDL 468
VE+ + E + +A+ + ++SG + +V +H + +
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISG-----------LCQVRRDHDAI----RV 533
Query: 469 VKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILE 528
V+++ + G + L ++ ++ L+ + EK +L ++ KP +Y ++
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK----KPDSITYNTLIS 589
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
+ K D + E++ +M++ G + Y ++ AY
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY-KKNDKRKIADVLLLM 301
IY L++ Q A + K+K+ F L A N L+ L+ KN+ K+ ++L M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 302 ENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLE 361
E E KP +TYN LI G KD +++++++M+E+GL+ V T ++ Y S G
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 362 DKAEALLKEME-GENLKQNRWVCRTLLPLYA---NLGKADDVGRIWKVCVTNPYVEECLA 417
D+A L K+M + N + L+ ++ N G+A + K+ + P VE A
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 418 AIEAWGKLNKIDEAEAAFEMLSGKTELS 445
+ LN+ + E +++ E S
Sbjct: 693 LFKC---LNEKTQGETLLKLMDEMVEQS 717
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 108/262 (41%), Gaps = 35/262 (13%)
Query: 304 ENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDK 363
E P+ +TYN LID + + ++V +MKE+ ++ +V T +VG +
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 364 AEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWG 423
A +ME E +K N TL+ C + VE+ + E
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLI----------------HACCSVSNVEKAMYWYEKML 503
Query: 424 KLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLT 483
+ +A+ + ++SG + +V +H + +V+++ + G + L
Sbjct: 504 EAGCSPDAKIYYALISG-----------LCQVRRDHDAI----RVVEKLKEGGFSLDLLA 548
Query: 484 WDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIF 543
++ ++ L+ + EK +L ++ KP +Y ++ + K D + E++
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGK----KPDSITYNTLISFFGKHKDFESVERMM 604
Query: 544 YRMKQAGYTSRIRQYQVLLQAY 565
+M++ G + Y ++ AY
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAY 626
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 151/361 (41%), Gaps = 20/361 (5%)
Query: 240 GEVIYRTLLAN-CVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLL-LYKKNDKRKIADV 297
G+V RT L N +++ ++A IFN + + + L+ L ++ + +
Sbjct: 317 GDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 298 LLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
+ +E +KP + +N +I+ S ++ +I +KMKE G + T L+ Y
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 358 FG-LEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV------TNP 410
G LE+ + L + E L+ N C L+ + N K ++ W + P
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEA---WNIVYKMQSYGVKP 493
Query: 411 YVEECLAAIEAWGKLNKIDEAEAAF--EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDL 468
V +A+ ++ AE ML K + + + C ++ Y + +
Sbjct: 494 DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRF 553
Query: 469 VKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILE 528
RM + G +++++K ++ +++ ++ + VKP ++ ++
Sbjct: 554 FYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG----VKPDVVTFSTLMN 609
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP--AYGIRDRLKGDNIYP 586
+S GD+ E+I+ M + G I + +L + Y +A P A I ++++ + P
Sbjct: 610 AWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRP 669
Query: 587 N 587
N
Sbjct: 670 N 670
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/446 (20%), Positives = 172/446 (38%), Gaps = 99/446 (22%)
Query: 208 ERDYASRVDLIAKI--HGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFN 265
++ + S + LI+K+ +GL+ P++ +++ ++ + N+ +A +IF
Sbjct: 367 QKHFHSLLSLISKVEKNGLK---------PDT----ILFNAIINASSESGNLDQAMKIFE 413
Query: 266 KMKDLDFPLTAFACNQLLLLYKK----------------------NDK------------ 291
KMK+ TA N L+ Y K ND+
Sbjct: 414 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 292 RKIA---DVLLLMENENVKPSPLTYNILIDVKG-LSKDIAGMDQIVDKMKEEGLELDVKT 347
RKI +++ M++ VKP +T+N L + D I+ +M ++ +V+T
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRT 533
Query: 348 KAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVC- 406
+V Y G ++A M+ + N +V +L+ + N+ D VG + +
Sbjct: 534 CGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Query: 407 --VTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLM 463
P V + AW + + E + +ML G + S + + YA
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 464 KGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSY 523
K + ++ +M G R + + I+ + AGE++KA
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA----------------------- 690
Query: 524 IAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP--AYGIRDRLKG 581
++ Y K I G + + Y+ L+ + +AK P A + ++G
Sbjct: 691 ---MQVYKKMCGI------------VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEG 735
Query: 582 DNIYPNRNLATLLAQVDGFRKTPVSD 607
N+ P R L+A DG++ VS+
Sbjct: 736 KNVVPTRKTMQLIA--DGWKSIGVSN 759
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 119/268 (44%), Gaps = 19/268 (7%)
Query: 198 LESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVET--------IPESLRGEV-----IY 244
+E I + + Y + D++ + L KA A + + IP L +V
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVT-FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 245 RTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKK-NDKRKIADVLLLMEN 303
T++ ++ +++A F +MK+L F N L+ + ND + +V+ LME
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 304 ENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDK 363
VKP +T++ L++ D+ ++I M E G++ D+ ++L Y G +K
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 364 AEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWK----VCVTNPYVEECLAAI 419
AE +L +M ++ N + ++ + + G+ +++K + +P + I
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 420 EAWGKLNKIDEAEAAFEMLSGKTELSSK 447
+G+ + +AE + + GK + ++
Sbjct: 715 WGFGEAKQPWKAEELLKDMEGKNVVPTR 742
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY-KKNDKRKIADVLLLM 301
IY L++ Q A + K+K+ F L A N L+ L+ KN+ K+ ++L M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 302 ENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLE 361
E E KP +TYN LI G KD +++++++M+E+GL+ V T ++ Y S G
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 362 DKAEALLKEME-GENLKQNRWVCRTLLPLYA---NLGKADDVGRIWKVCVTNPYVE 413
D+A L K+M + N + L+ ++ N G+A + K+ + P VE
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 108/262 (41%), Gaps = 35/262 (13%)
Query: 304 ENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDK 363
E P+ +TYN LID + + ++V +MKE+ ++ +V T +VG +
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 364 AEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWG 423
A +ME E +K N TL+ C + VE+ + E
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLI----------------HACCSVSNVEKAMYWYEKML 503
Query: 424 KLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLT 483
+ +A+ + ++SG + +V +H + +V+++ + G + L
Sbjct: 504 EAGCSPDAKIYYALISG-----------LCQVRRDHDAI----RVVEKLKEGGFSLDLLA 548
Query: 484 WDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIF 543
++ ++ L+ + EK +L ++ KP +Y ++ + K D + E++
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGK----KPDSITYNTLISFFGKHKDFESVERMM 604
Query: 544 YRMKQAGYTSRIRQYQVLLQAY 565
+M++ G + Y ++ AY
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAY 626
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 160/381 (41%), Gaps = 55/381 (14%)
Query: 211 YASRVDLIAKIHGLQKAEAYVETIPES--LRGEVIYRTLLANCVQKNNVKKAEEIFNKMK 268
Y S +++ K ++A ++ + E+ L V Y TLL+ V+ + +A +F +MK
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Query: 269 DLDFPLTAFACNQLLLLYKKNDKRKIADVLLL-MENENVKPSPLTYNILIDVKGLSKDIA 327
+++ L CN ++ +Y + D K AD L + +++P+ ++YN ++ V G ++
Sbjct: 323 EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFG 382
Query: 328 GMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLL 387
+ M+ + +E +V T ++ Y +KA L++EM+ ++ N T+
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI- 441
Query: 388 PLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEML-SGKTELSS 446
I WGK K+D A F+ L S E+
Sbjct: 442 -------------------------------ISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Query: 447 KNCSAMLRVYANHKMLMKGKDLVK--RMADSGCRIGPLTWDAIVKLYVEAGEVEKADSIL 504
M+ Y ++ K L+ ++ D+ R + + + +AG E+A +
Sbjct: 471 VLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPR------ETAITILAKAGRTEEATWVF 524
Query: 505 QKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
++A + + S + ++ YS+ N ++F +M+ AGY ++L A
Sbjct: 525 RQAFESGEVKDI----SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNA 580
Query: 565 YIKAKLPAYGIRDRLKGDNIY 585
Y K R+ K D +Y
Sbjct: 581 YGKQ-------REFEKADTVY 594
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 171/395 (43%), Gaps = 20/395 (5%)
Query: 215 VDLIAKIHGLQKAEAYVETIPESLR---GEVIYRTLLANCVQKNNVKKAEEIFNKMKDLD 271
V L+++ + Q++ A ++ + E + Y +L N ++ A +F++M+
Sbjct: 126 VSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA 185
Query: 272 FPLTAFACNQLLLLYKKNDKRKIA-DVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMD 330
+ + L+ + K A L ME + V + Y+ LI++ D +
Sbjct: 186 LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAI 245
Query: 331 QIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLY 390
I ++K G+ D+ ++ Y L +A L+KEM + N TLL +Y
Sbjct: 246 SIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVY 305
Query: 391 ANLGKADDVGRIWKV-----CVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSG-KTEL 444
K + ++ C + + C I+ +G+L+ + EA+ F L E
Sbjct: 306 VENHKFLEALSVFAEMKEVNCALD--LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 445 SSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSIL 504
+ + + +LRVY ++ + L + M +T++ ++K+Y + E EKA +++
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 505 QKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
Q+ + ++P +Y I+ + K G + + +F +++ +G YQ ++ A
Sbjct: 424 ----QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 479
Query: 565 YIKAKLPAYGIR--DRLK-GDNIYPNRNLATLLAQ 596
Y + L + R LK DNI P T+LA+
Sbjct: 480 YERVGLMGHAKRLLHELKLPDNI-PRETAITILAK 513
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 143/333 (42%), Gaps = 13/333 (3%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLL-LYKKNDKRKIADVLLL 300
V +LL + +A + ++M +++ N L+ L+ N + ++
Sbjct: 151 VTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDR 210
Query: 301 MENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
M +P TY +++ GL K DI ++ KM++ +E DV ++ ++
Sbjct: 211 MVARGCQPDLFTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEEC 415
+ A L EM+ + ++ N +L+ N G+ D R+ + NP V
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 416 LAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
A I+A+ K K+ EAE + EM+ + S+++ + H L + K + + M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
C +T++ ++K + +A VE+ + ++ +Q+ +Y +++ + G
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT----VTYNTLIQGLFQAG 444
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
D ++KIF +M G I Y +LL K
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 148/329 (44%), Gaps = 11/329 (3%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLL-L 300
VI+ TLL + V +A E+ ++M ++ T N L+ N K A VL+
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
M +P+ +TY +++V S A +++ KM+E ++LD ++++ G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 361 EDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEECLA 417
D A L EME + K + TL+ + N G+ DD ++ + + +P V
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 418 AIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSG 476
I+++ K K+ EA+ EM+ ++ ++++ + L + +V M G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 477 CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSH-ANQVKPLFSSYIAILEQYSKRGD 535
C +T++ ++ Y +A ++ + ++ + + AN V +Y +++ + + G
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV-----TYNTLVQGFCQSGK 453
Query: 536 IHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
+ ++K+F M I Y++LL
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 152/335 (45%), Gaps = 15/335 (4%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLL 300
+ TL+ V A + ++M + F +L + K+ + +A ++L
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQ---IVDKMKEEGLELDVKTKAVLVGHYIS 357
ME N+K + Y+I+ID GL KD +D + ++M+ +G + D+ T L+G + +
Sbjct: 254 MEERNIKLDAVKYSIIID--GLCKD-GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL- 416
G D LL++M + N L+ + GK + ++ K + +
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 417 --AAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMA 473
+ I+ + K N+++EA + M+S + + ++ Y + G +L + M+
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKR 533
G +T++ +V+ + ++G++E A +K Q+ + +V+P SY +L+
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVA----KKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 534 GDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
G++ + +IF +++++ I Y +++ A
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 168/421 (39%), Gaps = 18/421 (4%)
Query: 160 LDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIA 219
+D+ VE G + + + ++ K A++L +E ++ I+ Y+ +D +
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIIIDGLC 274
Query: 220 KIHGLQKA-EAYVETIPESLRGEVI-YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAF 277
K L A + E + + ++I Y TL+ ++ M
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 278 ACNQLLLLYKKNDKRKIADVLLL-MENENVKPSPLTYNILIDVKGLSKD--IAGMDQIVD 334
+ L+ + K K + AD LL M + P+ +TYN LID G K+ + Q+VD
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID--GFCKENRLEEAIQMVD 392
Query: 335 KMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLG 394
M +G + D+ T +L+ Y D L +EM + N TL+ + G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 395 KADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLR 454
K + ++++ V+ + ++ L E E A E+ GK E S +
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF-GKIEKSKMELDIGIY 511
Query: 455 VYANHKMLMKGK-----DLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQ 509
+ H M K DL + G ++ ++ ++ + KAD + +K T+
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 510 QSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
+ HA P +Y ++ + D + ++ MK +G+ + + ++++ +
Sbjct: 572 EGHA----PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
Query: 570 L 570
L
Sbjct: 628 L 628
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 152/348 (43%), Gaps = 41/348 (11%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY--------KKNDKRK 293
V + TL+ N +A + ++M A C L+ Y K+ D
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRM-------VAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 294 IADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKE---EGLELDVKTKAV 350
++L ME ++P L YN +ID GL K MD ++ KE +G+ +V T +
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIID--GLCK-YKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 351 LVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV--- 407
L+ ++G A LL +M + + + L+ + GK + +++ V
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 408 TNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNC-------SAMLRVYANHK 460
+P + + I + +++DEA+ FE + SK+C + +++ + +K
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEF------MVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 461 MLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLF 520
+ +G ++ + M+ G +T++ +++ +AG+ + A I ++ ++ V P
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV----SDGVPPNI 466
Query: 521 SSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
+Y +L+ K G + + +F ++++ I Y ++++ KA
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 152/365 (41%), Gaps = 49/365 (13%)
Query: 246 TLLANC-VQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENE 304
++L NC +++ + A + KM L + + LL Y + ++I++ + L++
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS--KRISEAVALVDQM 177
Query: 305 NV---KPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHY------ 355
V +P+ +T+N LI L + ++D+M +G + D+ T V+V
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 356 -ISFGLEDKAEA----------------------------LLKEMEGENLKQNRWVCRTL 386
++F L +K E L KEME + ++ N +L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 387 LPLYANLGKADDVGRIWKVCV---TNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKT 442
+ N G+ D R+ + NP V A I+A+ K K+ EAE + EM+
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 443 ELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADS 502
+ S S+++ + H L + K + + M C +T++ ++K + + VE+
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 503 ILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLL 562
+ ++ +Q+ +Y +++ + GD +++IF M G I Y LL
Sbjct: 418 VFREMSQRGLVGNT----VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 563 QAYIK 567
K
Sbjct: 474 DGLCK 478
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 26/271 (9%)
Query: 139 RIESELCNKIMDAPGMAIHTALDKWVEEGK---------EMSRQEISQAIF----LLRKR 185
R+ S++ + ++ +D +V+EGK EM ++ I +I L+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 186 NMYGR---ALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPE-SLRG- 240
M+ R A Q+ E++ SK D + LI ++ E +E E S RG
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFP----DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 241 ---EVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADV 297
V Y L+ Q + A+EIF +M P N LL KN K + A V
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 298 LL-LMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYI 356
+ ++ ++P+ TYNI+I+ + + + + +G++ DV ++ +
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 357 SFGLEDKAEALLKEMEGENLKQNRWVCRTLL 387
G +++A+AL KEM+ + N TL+
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 12/273 (4%)
Query: 301 MENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
M +P+ +TY ++ V GL K DI +++KM+ +E +V + ++ +
Sbjct: 216 MVQRGCQPNLVTYGVV--VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEEC 415
ED A L EME + ++ N +L+ N + D R+ + NP V
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 416 LAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
A I+A+ K K+ EAE + EM+ + S+++ + H L + K + + M
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
C +T++ ++ + +A +++ + ++ +Q+ +Y ++ + +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT----VTYTTLIHGFFQAR 449
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
D N++ +F +M G I Y LL K
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 180/411 (43%), Gaps = 15/411 (3%)
Query: 211 YASRVDLIAKIHGLQKAE-AYVETIPES-LRGEVIYRTLLANCVQKNNVKKAEEIFNKMK 268
Y S + L+ +I L +AE A+ E I + L V+Y TL+ ++ +++ A + F +M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 269 DLDFPLTAFACNQLLLLYKK-NDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIA 327
D ++ + + D + + M + ++P +T+ LI+ + +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 328 GMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLL 387
++ + M + G +V T L+ G D A LL EM L+ N + +++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 388 PLYANLGKADDVGRI---WKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTE 443
G ++ ++ ++ N ++A+ K ++D+A+ EML +
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 444 LSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSI 503
+ + ++ + H ML G+ L+ M G T++++VK Y ++ A +I
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 504 LQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQ 563
+ + V P +Y +++ + K ++ + +F MK G++ + Y VL++
Sbjct: 619 YKDMCSRG----VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 564 AYIKAK--LPAYGIRDRLKGDNIYPNRNLATLLA--QVDGFRKTPVSDLLD 610
++K K L A + D+++ + + ++ + + + G R + D +D
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 130/318 (40%), Gaps = 10/318 (3%)
Query: 257 VKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKP--SPLTYN 314
+++A +F KM + L+ +CN L K+ + +++ E V + +YN
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 315 ILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGE 374
I+I I ++ M+ +G DV + + +V Y FG DK L++ M+ +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 375 NLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL---AAIEAWGKLNKIDEA 431
LK N ++ +++ L + K + + + + + + I+ + K I A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 432 EAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKL 490
F EM S +A++ + +++ L M G +T+ ++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 491 YVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAG 550
Y +AG ++ A + Q P +Y +++ K GD+ ++ ++ + M + G
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAG----CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 551 YTSRIRQYQVLLQAYIKA 568
I Y ++ K+
Sbjct: 487 LQPNIFTYNSIVNGLCKS 504
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 180/411 (43%), Gaps = 15/411 (3%)
Query: 211 YASRVDLIAKIHGLQKAE-AYVETIPES-LRGEVIYRTLLANCVQKNNVKKAEEIFNKMK 268
Y S + L+ +I L +AE A+ E I + L V+Y TL+ ++ +++ A + F +M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 269 DLDFPLTAFACNQLLLLYKK-NDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIA 327
D ++ + + D + + M + ++P +T+ LI+ + +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 328 GMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLL 387
++ + M + G +V T L+ G D A LL EM L+ N + +++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 388 PLYANLGKADDVGRI---WKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTE 443
G ++ ++ ++ N ++A+ K ++D+A+ EML +
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 444 LSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSI 503
+ + ++ + H ML G+ L+ M G T++++VK Y ++ A +I
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 504 LQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQ 563
+ + V P +Y +++ + K ++ + +F MK G++ + Y VL++
Sbjct: 619 YKDMCSRG----VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 564 AYIKAK--LPAYGIRDRLKGDNIYPNRNLATLLA--QVDGFRKTPVSDLLD 610
++K K L A + D+++ + + ++ + + + G R + D +D
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPID 725
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 130/318 (40%), Gaps = 10/318 (3%)
Query: 257 VKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKP--SPLTYN 314
+++A +F KM + L+ +CN L K+ + +++ E V + +YN
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 315 ILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGE 374
I+I I ++ M+ +G DV + + +V Y FG DK L++ M+ +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 375 NLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL---AAIEAWGKLNKIDEA 431
LK N ++ +++ L + K + + + + + + I+ + K I A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 432 EAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKL 490
F EM S +A++ + +++ L M G +T+ ++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 491 YVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAG 550
Y +AG ++ A + Q P +Y +++ K GD+ ++ ++ + M + G
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAG----CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 551 YTSRIRQYQVLLQAYIKA 568
I Y ++ K+
Sbjct: 487 LQPNIFTYNSIVNGLCKS 504
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 163/400 (40%), Gaps = 43/400 (10%)
Query: 208 ERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIY--RTLLANCVQKNNVKKAEEIFN 265
E Y S + ++ K + L +A E + ++ R Y T++ +A +
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 266 KMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKD 325
+ + + A N +L +K K A + ++ P+ TYNILID+ +
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
+ ++ D M++ GL +V+T ++V D+A A+ +EM+
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD------------- 439
Query: 386 LLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFE-MLSGKTEL 444
+KVC + + C + I+ GK+ ++D+A +E ML
Sbjct: 440 -----------------YKVCTPDE-ITFC-SLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 445 SSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSIL 504
+S +++++ + NH G + K M + C + + +AGE EK ++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 505 QKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
++ A + P SY ++ K G + + ++FY MK+ G R Y +++
Sbjct: 541 ----EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 565 YIKAKL--PAYGIRDRLKGDNIYPNRNLATLLAQVDGFRK 602
+ K AY + + +K P + T + +DG K
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEP--TVVTYGSVIDGLAK 634
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 138/359 (38%), Gaps = 51/359 (14%)
Query: 235 PESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLL-LYKKNDKRK 293
PES Y +LL + N ++I +M F + C +++L K N R+
Sbjct: 98 PES------YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLRE 151
Query: 294 IADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVG 353
DV+ +M +P+ Y LI M + +M+E G E V L+
Sbjct: 152 GYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211
Query: 354 HYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN---P 410
+ G D A +LL EM+ +L + + + + +GK D + + N P
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 411 YVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVK 470
+ I K N++DEA FE L + YA + M+M
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC--------TYAYNTMIMG------ 317
Query: 471 RMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQY 530
Y AG+ ++A S+L++ A P +Y IL
Sbjct: 318 --------------------YGSAGKFDEAYSLLER----QRAKGSIPSVIAYNCILTCL 353
Query: 531 SKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA-KL-PAYGIRDRLKGDNIYPN 587
K G + + K+F MK+ + Y +L+ +A KL A+ +RD ++ ++PN
Sbjct: 354 RKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 154/381 (40%), Gaps = 45/381 (11%)
Query: 208 ERDYASRVDLIAKIHGLQKAEAYVETIPES--LRGEVIYRTLLANCVQKNNVKKAEEIFN 265
E + S +D + K+ + A E + +S ++Y +L+ N + +I+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 266 KM------KDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKPSPLTYNILIDV 319
M DL T C ++K + K + ++ P +Y+ILI
Sbjct: 507 DMINQNCSPDLQLLNTYMDC-----MFKAGEPEKGRAMFEEIKARRFVPDARSYSILI-- 559
Query: 320 KGLSKDIAGMD----QIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGEN 375
GL K AG ++ MKE+G LD + +++ + G +KA LL+EM+ +
Sbjct: 560 HGLIK--AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 376 LKQNRWVCRTLLPLYANLGKADDVGRIW-----KVCVTNPYVEECLAAIEAWGKLNKIDE 430
+ +++ A + + D+ ++ K N + L I+ +GK+ +IDE
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL--IDGFGKVGRIDE 675
Query: 431 AEAAFEMLSGKTELSSKNCSAMLRVYANH-KMLMKGKDL------VKRMADSGCRIGPLT 483
A E EL K + L + + L+K +++ + M + C +T
Sbjct: 676 AYLILE------ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 484 WDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIF 543
+ ++ + + KA Q+ +Q +KP SY ++ +K G+I + +F
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQG----MKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 544 YRMKQAGYTSRIRQYQVLLQA 564
R K G Y +++
Sbjct: 786 DRFKANGGVPDSACYNAMIEG 806
>AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3558495-3560078 FORWARD
LENGTH=359
Length = 359
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 32/200 (16%)
Query: 190 RALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLA 249
+AL++S+W+ K + D+++R LI + GL++AE Y E+IPE+LRGE +Y LL
Sbjct: 58 QALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLYTALLR 117
Query: 250 NCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKPS 309
+ +++ K + D +++F + K+ + L M+ N+
Sbjct: 118 SYAKRSEKKYLDRASRIHIQEDERISSFGT-----------RDKVDESLREMKESNIDLD 166
Query: 310 PLTYNILIDVKGLSKDIAGMDQIV---------------------DKMKEEGLELDVKTK 348
LT N + V + D+A M++ + ++ + LE DV+
Sbjct: 167 RLTVNKALRVYAAASDVAAMERFLADWEGTVKLDLMISTEQRRYTNEWQCSRLEFDVRMP 226
Query: 349 AVLVGHYISFGLEDKAEALL 368
+LV Y G+ +KAE L+
Sbjct: 227 IMLVSAYREKGMVEKAEKLM 246
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 132/325 (40%), Gaps = 36/325 (11%)
Query: 309 SPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALL 368
SP YN +ID+ G + ++D MK +E+ ++T +L+ Y+ GL +A
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 369 KEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN--PYVEECLAAIEAWGKLN 426
ME ++ ++ + +A + + P V + W +
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAG 269
Query: 427 KIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWD 485
+I EAE F EM E + S ++ + + D+ M DSGC +T++
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 486 AIVKLYVEAGEVEKA--------------DSILQKATQQSHA------NQVKPL------ 519
+++++V+AG EK D+I ++H N VK L
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Query: 520 -----FSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYG 574
S++ I K+ D++ + +++ +M +A Y +L++ ++ +K
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 575 IRDRLKGDN--IYPNRNLATLLAQV 597
++ + + D+ + PN N LL +
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTM 474
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 155 AIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASR 214
+I L++W ++G E++ + I L + AL+ S+W+ + D A++
Sbjct: 51 SIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKHSVFDNFPEDCAAQ 110
Query: 215 VDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQK-NNVKKAEEIFNKMKDLDFP 273
+ L+ + GL++AE + IPE +R Y LL++ + V KAE F KM++L F
Sbjct: 111 LHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTKPVRTVDKAEATFKKMRELGFL 167
Query: 274 LTAFACNQLLLLYKKNDKRKIADVLLL-MENENVKPSPLTYNILIDVKGLSKDIAGMDQI 332
L + N ++ LY + + + + LL ++ N++ L N +V + +I M++
Sbjct: 168 LKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSLKVN---NVSRVYANINAMEKF 224
Query: 333 VDKMKEEGLELDVKTKAVLVGHYISFGLEDKA 364
+ +EG+EL+ T + Y G +KA
Sbjct: 225 KTWVSKEGIELERDTIVAMAKAYHRAGSIEKA 256
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 145/335 (43%), Gaps = 17/335 (5%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDF-PLTAFACNQLLLLYKKNDKRKIADVLLL 300
V +LL N + +A + ++M ++ + P T + L++ N + ++
Sbjct: 136 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
Query: 301 MENENVKPSPLTYNILIDVKGLSK----DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYI 356
M + +P +TY +I+ GL K D+A +++KM++ +E DV + ++
Sbjct: 196 MVVKGCQPDLVTYGAVIN--GLCKRGEPDLAL--NLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 357 SFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVE 413
+ D A L EM+ + ++ + + +L+ N G+ D R+ + NP V
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 414 ECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRM 472
+ I+A+ K K+ EAE F EM+ + + ++++ + H L + + + M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 473 ADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSK 532
C +T++ ++ + +A +V + + +++ +Y ++ + +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT----VTYTTLIHGFFQ 427
Query: 533 RGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
D N++ +F +M G I Y LL K
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 165/396 (41%), Gaps = 59/396 (14%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL- 300
V + TL+ + V +A E+ ++M ++ T N L+ N K ++D +LL
Sbjct: 143 VTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK--VSDAVLLI 200
Query: 301 --MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
M +P+ +TY ++ V S A +++ KM+E ++LD ++++
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEEC 415
G D A L EME + K + + TL+ + G+ DD ++ + + P V
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 416 LAAIEAWGKLNKIDEAEAAFE----------------MLSGKTE-------------LSS 446
A I+ + K K+ EAE + ++ G + + S
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 447 KNCSAMLRV-------YANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEK 499
K C +R Y ++ G +L ++M+ G +T++ +++ + E G++E
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 500 ADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQ 559
A + Q+ + +V+P SY +L+ G+ + +IF +++++ I Y
Sbjct: 441 AKELFQEMVSR----RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 560 VLLQAYIKA-----------KLPAYGIRDRLKGDNI 584
+++ A LP G++ +K NI
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 12/270 (4%)
Query: 301 MENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
M +P+ +TY ++ V GL K DI +++KM+ +E DV ++ +
Sbjct: 141 MVQRGCQPNLVTYGVV--VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEEC 415
D A L KEME + ++ N +L+ + G+ D ++ + NP +
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 416 LAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
A I+A+ K K EAE +M+ + ++++ + H L K K + + M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
C T++ ++K + ++ VE + + + SH V +Y +++ G
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFR---EMSHRGLVGDTV-TYTTLIQGLFHDG 374
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
D N++K+F +M G I Y +LL
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 144/365 (39%), Gaps = 49/365 (13%)
Query: 246 TLLANC-VQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL---M 301
++ NC +++ + A + KM L + + LL Y + ++I+D + L M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS--KRISDAVALVDQM 179
Query: 302 ENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLE 361
KP T+ LI L + +VD+M + G + D+ T +V G
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 362 DKAEALLK-----------------------------------EMEGENLKQNRWVCRTL 386
D A +LLK EM+ + ++ + + +L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 387 LPLYANLGKADDVGRIWKVCV---TNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKT 442
+ N G+ D R+ + NP V A I+A+ K K+ EAE + EM+
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 443 ELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADS 502
+ S+++ + H L + K + + M C +T+ ++K + +A VE+
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 503 ILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLL 562
+ ++ +Q+ +Y ++ + + D N++ +F +M G I Y +LL
Sbjct: 420 LFREMSQRGLVGNT----VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 563 QAYIK 567
K
Sbjct: 476 DGLCK 480
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 126/294 (42%), Gaps = 20/294 (6%)
Query: 285 LYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELD 344
L K+ D +L ME ++ + YN +ID K + + +M +G+ D
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 345 VKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWK 404
V T + L+ ++G A LL +M + N L+ + GK + +++
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 405 VCV---TNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNC-------SAMLR 454
+ +P + + I + +++DEA+ FE+ + SK+C S +++
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL------MISKDCFPNVVTYSTLIK 406
Query: 455 VYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHAN 514
+ K + +G +L + M+ G +T+ ++ + +A + + A Q +Q +
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA----QMVFKQMVSV 462
Query: 515 QVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
V P +Y +L+ K G + + +F ++++ I Y ++++ KA
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 164/397 (41%), Gaps = 59/397 (14%)
Query: 224 LQKAEAYVETIPESLRGEVIYRTLLANCVQKNN-VKKAEEIFNKMKDLDFPLTAFACNQL 282
++ AY + + + G+ T+L N + KN+ V AEEIF +M+
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-------------- 619
Query: 283 LLLYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEG 340
+ + P +Y +LI+ G SK ++ I D+M EEG
Sbjct: 620 --------------------GKGIAPDVFSYGVLIN--GFSKLGNMQKASSIFDEMVEEG 657
Query: 341 LELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVG 400
L +V +L+G + G +KA+ LL EM + L N T++ Y G +
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 401 RIW-----KVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLR- 454
R++ K V + +V L ++ +LN ++ A F S+ +A++
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTL--VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINW 775
Query: 455 VYANHKMLMKGKDLVKRMADSGCRIG---PLTWDAIVKLYVEAGEVEKADSILQKATQQS 511
V+ K +K + L + M S R G +T++ ++ + G +E A + Q
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH---QMQ 832
Query: 512 HANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP 571
+AN + P +Y ++L Y K G +F AG Y V++ A++K +
Sbjct: 833 NAN-LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 572 --AYGIRDRLKGDNIYPNR---NLATLLAQVDGFRKT 603
A + D++ N + +++T A + GF K
Sbjct: 892 TKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 16/276 (5%)
Query: 297 VLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQ---IVDKMKEEGLELDVKTKAVLVG 353
VL M+ + + P YN LI GLSK MD+ + +M E GL+ + T +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLI--IGLSK-AKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 354 HYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVE 413
YI A+ +KEM + N+ +C L+ Y GK + ++ V +
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 414 EC---LAAIEAWGKLNKIDEAEAAFEMLSGK-TELSSKNCSAMLRVYANHKMLMKGKDLV 469
+ + K +K+D+AE F + GK + ++ ++ + K +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 470 KRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQS-HANQVKPLFSSYIAILE 528
M + G + ++ ++ + +GE+EKA +L + + + H N V +Y I++
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV-----TYCTIID 705
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
Y K GD+ + ++F MK G Y L+
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 111/265 (41%), Gaps = 41/265 (15%)
Query: 308 PSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEAL 367
P TY++LID K + ++ +M G+ LD T ++L+ + D A+ L
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 368 LKEM--EGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKL 425
+ EM G N+K PY+ +C I K
Sbjct: 335 VHEMVSHGINIK--------------------------------PYMYDC--CICVMSKE 360
Query: 426 NKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTW 484
+++A+A F+ M++ ++ ++++ Y K + +G +L+ M I P T+
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 485 DAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFY 544
+VK +G+++ A +I+++ A+ +P Y +++ + + ++ ++
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMI----ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 545 RMKQAGYTSRIRQYQVLLQAYIKAK 569
MK+ G I Y L+ KAK
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAK 501
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 144/326 (44%), Gaps = 15/326 (4%)
Query: 287 KKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIA-GMDQI---VDKMKE-EGL 341
KK R + M+N +P YN LI ++D A ++++ +DKMK E
Sbjct: 145 KKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERC 204
Query: 342 ELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGR 401
+ +V T +L+ + G D+ AL K+++ + + + ++ Y G ++
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 402 IWKVCVTN---PYVEECLAAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYA 457
+ +N P + I+++GK + ++ E F+ ++ K + + ++M+ Y
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 458 NHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVK 517
+M+ K + + K+M D +T++ ++ +Y G V +A I ++ + +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKA- 383
Query: 518 PLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP--AYGI 575
S+ A+LE Y + G ++K+F+ Y+ L +AY KA + +
Sbjct: 384 ---STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQIL 440
Query: 576 RDRLKGDNIYPNRNLATLLAQVDGFR 601
+++ D I PN+ +V G R
Sbjct: 441 MKKMEKDGIVPNKRFFLEALEVFGSR 466
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 49/298 (16%)
Query: 220 KIHGLQKAEAYVETIPESLRGE---VIYRTLLANCVQKNNVKKAEEIFNKMKDLDF-PLT 275
K L+K Y++ + R + V Y LL Q V + +F KDLD P++
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF---KDLDMSPVS 240
Query: 276 --AFACNQLLLLYKKNDK-RKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQI 332
+ N ++ Y KN +++ VL M + KP +T+N+LID G ++ M+Q
Sbjct: 241 PDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQT 300
Query: 333 VDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYAN 392
+ + + T ++ +Y + DKAE + K+M N +P +
Sbjct: 301 FKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN----------YIPSFIT 350
Query: 393 LGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTE--LSSKNCS 450
EC+ I +G + A FE + G+++ L + +
Sbjct: 351 Y--------------------ECM--IMMYGYCGSVSRAREIFEEV-GESDRVLKASTLN 387
Query: 451 AMLRVYANHKMLMKGKDLVKRMADSGCRIGP--LTWDAIVKLYVEAGEVEKADSILQK 506
AML VY + + ++ L S R+ P T+ + K Y +A E+ +++K
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNA--SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 142/333 (42%), Gaps = 19/333 (5%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQL---LLLYKKNDKRKIADVL 298
+ + TL+ + V +A E+ ++M ++ N L L L K A+ +
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE-----AEAM 213
Query: 299 LL---MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHY 355
LL M +P+ +TY +++V S A +++ KM+E ++LD ++++
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 356 ISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYV 412
G D A L EME + + N L+ + N G+ DD ++ + + NP V
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 413 EECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKR 471
I+++ K K+ EAE EM+ + ++++ + L K +V
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 472 MADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYS 531
M GC T++ ++ Y +A ++ + +K + + +Y +++ +
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT----VTYNTLIQGFC 449
Query: 532 KRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
+ G ++ ++++F M I Y++LL
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 26/299 (8%)
Query: 297 VLLLMENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGH 354
VL M ++ + PS +YNIL+D GL K ++ IV MK G+ D T L+
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMD--GLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 355 YISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEE 414
Y S G D A++LL+EM N N + C LL +G+ + + + Y +
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 415 CLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
+ L E + A E++ G +RV+ + + G + + D
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKG------------MRVHGSAALGNLGNSYIGLVDD 513
Query: 475 S----GCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQY 530
S C +T+ ++ +AG +A ++ + + +++P +Y + +
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE----KLQPDSVAYNIFIHHF 569
Query: 531 SKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY-IKAKL-PAYGIRDRLKGDNIYPN 587
K+G I ++ ++ M++ G + Y L+ IK ++ +G+ D +K I PN
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 117/268 (43%), Gaps = 12/268 (4%)
Query: 306 VKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAE 365
+ P T+N+LI S + ++ D+M E+G + + T +LV Y GL DK
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 366 ALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL---AAIEAW 422
LL ME + N+ + T++ + G+ DD ++ + V + + + I A
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 423 GKLNKIDEAEAAFEMLS-----GKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGC 477
K K+ +A F + G +S + ML+ + +L K L + + ++
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 478 RIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIH 537
+++ ++ V G+ +A+++L++ T + + P SY +++ K G +
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG----IGPSIYSYNILMDGLCKLGMLS 378
Query: 538 NSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
+++ I MK+ G Y LL Y
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 137/358 (38%), Gaps = 58/358 (16%)
Query: 175 ISQAIFLLRKRNMYGRALQ----------LSEWLESKKQIEFIERDYASRVDLIAKIHGL 224
IS+A LLRK N G L L E K IE ++ RV A + L
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK---GMRVHGSAALGNL 503
Query: 225 QKAEAYVETIPESLRGE------VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFA 278
+Y+ + +SL + Y TLL + +A+ +F +M + A
Sbjct: 504 --GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA 561
Query: 279 CNQLLLLYKKNDKRKIA-DVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMK 337
N + + K K A VL ME + S TYN LI G+ I + ++D+MK
Sbjct: 562 YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK 621
Query: 338 EEGLELDVKTKAVLVGHYISFG--LEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGK 395
E+G+ ++ T + Y+ G +ED A LL EM +N+ N + + L
Sbjct: 622 EKGISPNICTYNTAI-QYLCEGEKVED-ATNLLDEMMQKNIAPNVFSFKYL--------- 670
Query: 396 ADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRV 455
IEA+ K+ D A+ FE S M
Sbjct: 671 -----------------------IEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNE 707
Query: 456 YANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHA 513
L+K +L++ + D G +G + +V+ + E+E A IL K + +
Sbjct: 708 LLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG 765
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 148/340 (43%), Gaps = 15/340 (4%)
Query: 237 SLRGEVIYRT------LLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLL-LLYKKN 289
+LR E IY + LL + V+ + +F + + DF + F + + K +
Sbjct: 134 ALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLS 193
Query: 290 DKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKA 349
D K ++ M+++ + PS YN+LID K + +Q+ D+M L + T
Sbjct: 194 DVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253
Query: 350 VLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN 409
L+ Y G +K+ + + M+ ++++ + TLL G +D + K
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 410 PYVEECLAAIEAWGKLNKIDEAEAAFEM----LSGKTELSSKNCSAMLRVYANHKMLMKG 465
+V + + + ++AEAA + + ++++ CS +L + K
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 466 KDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIA 525
++++ R G + ++ ++ Y G++ A ++ +Q +KP +Y
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG----MKPDHLAYNC 429
Query: 526 ILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
++ ++ + G++ N+EK +MK G + + Y +L+ Y
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 157/390 (40%), Gaps = 65/390 (16%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA------ 295
+ + TLL + V+ AE + +MKDL F AF + L Y N+K + A
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 296 -------------DVLL--------------LMENENVK---PSPLTYNILIDVKGLSKD 325
+LL ++ E K P+ + YN +ID D
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
+ G ++ M+++G++ D L+ + G + AE + +M+ + + +
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 386 LLPLYANLGKADDVGRIWKVCVTN---PYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKT 442
L+ Y + D I K N P V I K +K+ EA+ K
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV------KR 518
Query: 443 ELSSKNCSAMLRVYANHKMLM-----KGK-----DLVKRMADSGCRIGPLTWDAIVKLYV 492
++ + S +R+Y ML+ KGK K M G + +T++ ++
Sbjct: 519 DMEDRGVSPKVRIY---NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 493 EAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYT 552
G++ +A+ +L + +++ +KP +Y +++ Y G++ ++ MK++G
Sbjct: 576 MTGKLSEAEDLLLEISRKG----LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 553 SRIRQYQVLLQAYIKAKLPAYGIRDRLKGD 582
++ Y +L+ K + + +RL G+
Sbjct: 632 PTLKTYHLLISLCTKEGIE---LTERLFGE 658
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 140/312 (44%), Gaps = 15/312 (4%)
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIA-GMDQI---VDKMKE-EGLELDVKTKAVLVGHY 355
M+N +P YN LI ++D A ++++ +DKMK E + +V T +L+ +
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 356 ISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN---PYV 412
G D+ AL K+++ + + + ++ Y G ++ + +N P +
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 413 EECLAAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKR 471
I+++GK + ++ E F+ ++ K + + ++M+ Y +M+ K + + K+
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 472 MADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYS 531
M D +T++ ++ +Y G V +A I ++ + + S+ A+LE Y
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKA----STLNAMLEVYC 394
Query: 532 KRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP--AYGIRDRLKGDNIYPNRN 589
+ G ++K+F+ Y+ L +AY KA + + +++ D I PN+
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Query: 590 LATLLAQVDGFR 601
+V G R
Sbjct: 455 FFLEALEVFGSR 466
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 49/298 (16%)
Query: 220 KIHGLQKAEAYVETIPESLRGE---VIYRTLLANCVQKNNVKKAEEIFNKMKDLDF-PLT 275
K L+K Y++ + R + V Y LL Q V + +F KDLD P++
Sbjct: 184 KAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF---KDLDMSPVS 240
Query: 276 --AFACNQLLLLYKKNDK-RKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQI 332
+ N ++ Y KN +++ VL M + KP +T+N+LID G ++ M+Q
Sbjct: 241 PDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQT 300
Query: 333 VDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYAN 392
+ + + T ++ +Y + DKAE + K+M N +P +
Sbjct: 301 FKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN----------YIPSFIT 350
Query: 393 LGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTE--LSSKNCS 450
EC+ I +G + A FE + G+++ L + +
Sbjct: 351 Y--------------------ECM--IMMYGYCGSVSRAREIFEEV-GESDRVLKASTLN 387
Query: 451 AMLRVYANHKMLMKGKDLVKRMADSGCRIGP--LTWDAIVKLYVEAGEVEKADSILQK 506
AML VY + + ++ L S R+ P T+ + K Y +A E+ +++K
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNA--SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 47/296 (15%)
Query: 312 TYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEM 371
T+N LID+ G + + + +M + G+ +D T ++ + G +AE+LLK+M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 372 EGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEA 431
E + + + LL L+A+ G + AA+E + K+ K+
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIE-------------------AALEYYRKIRKV--- 404
Query: 432 EAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLY 491
F + A+L + KM+ + + ++ M + RI + I+++Y
Sbjct: 405 -GLFP--------DTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY 455
Query: 492 VEAGEVEKADSILQKATQQSHANQVKPLFSSYI--AILEQYSKRGDIHNSEKIFY-RMKQ 548
V G V +A ++ ++ Q+ + SS A+++ Y+++G +E +FY +
Sbjct: 456 VNEGLVVQAKALFERF-------QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNM 508
Query: 549 AGYTSRIRQYQVLLQAYIKAKL--PAYGIRDRLKGDNIYPNR----NLATLLAQVD 598
+G + + +Y V+++AY KAKL A + +K +P+ +L +LA VD
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVD 564
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 144/349 (41%), Gaps = 19/349 (5%)
Query: 232 ETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDK 291
++ P R + TL+ + + A +F++M P+ N ++ +
Sbjct: 296 DSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGH 355
Query: 292 RKIADVLLL-MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAV 350
A+ LL ME + + P TYNIL+ + + DI + K+++ GL D T
Sbjct: 356 LSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRA 415
Query: 351 LVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV----C 406
++ + + EA++ EM+ +++ + ++ +Y N G +++ C
Sbjct: 416 VLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDC 475
Query: 407 VTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSK-----NCSAMLRVYANHKM 461
V + A I+ + + EAE F GK +S + + M++ Y K+
Sbjct: 476 VLSS--TTLAAVIDVYAEKGLWVEAETVF---YGKRNMSGQRNDVLEYNVMIKAYGKAKL 530
Query: 462 LMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFS 521
K L K M + G T++++ ++ V++A IL + KP
Sbjct: 531 HEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG----CKPGCK 586
Query: 522 SYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL 570
+Y A++ Y + G + ++ ++ M++ G Y L+ + ++ +
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 123/261 (47%), Gaps = 31/261 (11%)
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMD------QIVDKMKEEGLELDVKTKAVLVGH 354
M+N+ P TYN L + +AG+D +I+ +M + G + KT A ++
Sbjct: 541 MKNQGTWPDECTYNSLFQM------LAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 355 YISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV-----CVTN 409
Y+ GL A L + ME +K N V +L+ +A G ++ + +++ +N
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 410 PYVEECLAAIEAWGKLNKIDEAEAAFEML---SGKTELSSKNCSAMLRVYANHKMLMKGK 466
V L I+A+ K+ ++EA ++ + G ++++ N +ML + A+ ++ + +
Sbjct: 655 HIVLTSL--IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN--SMLSLCADLGIVSEAE 710
Query: 467 DLVKRMADSG-CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIA 525
+ + + G C + +++ ++ LY G +++A + ++ + + +S+
Sbjct: 711 SIFNALREKGTCDV--ISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDC----TSFNQ 764
Query: 526 ILEQYSKRGDIHNSEKIFYRM 546
++ Y+ G + ++F+ M
Sbjct: 765 VMACYAADGQLSECCELFHEM 785
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 161/395 (40%), Gaps = 53/395 (13%)
Query: 217 LIAKIHGLQKAEAYVETIPESLRGEVIY----RTLLANC-VQKNNVKKAEEIFNKMKDLD 271
L++ I ++K + + + R E+++ +L NC +++ + A + KM L
Sbjct: 91 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 272 FPLTAFACNQLLLLYKKNDKRKIADVLLL---MENENVKPSPLTYNILIDVKGLSKDIAG 328
+ + + LL Y ++I+D + L M +P +T+ LI L +
Sbjct: 151 YEPSIVTLSSLLNGYCHG--KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 329 MDQIVDKMKEEGLELDVKTKAVLVGHY-------ISFGLEDKAEA--------------- 366
+VD+M + G + ++ T V+V ++ L +K EA
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 367 -------------LLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNP 410
L KEME + ++ N +L+ + G+ D ++ + NP
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 411 YVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLV 469
+ A I+A+ K K EAE + +M+ + ++++ + H L K K +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 470 KRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQ 529
+ M C +T++ ++K + ++ VE + + + SH V +Y +++
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR---EMSHRGLVGDTV-TYTTLIQG 444
Query: 530 YSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
GD N++K+F +M G I Y +LL
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 141/343 (41%), Gaps = 18/343 (5%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLL-LYKKNDKRKIADVLLL 300
V +LL + A + ++M ++ + F L+ L+ N + ++
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 301 MENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
M +P +TY + V GL K DI +++KM+ ++ +V ++ +
Sbjct: 214 MVQRGCQPDLVTYGTV--VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEEC 415
+ A L EME + ++ N +L+ N G+ D R+ + NP V
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 416 LAAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
A I+A+ K K+ EAE E M+ + + + ++ + H L + K + K M
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
C T++ ++ + + VE + ++ +Q+ +Y I++ + + G
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT----VTYTTIIQGFFQAG 447
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYGIRD 577
D +++ +F +M + I Y +LL L +YG D
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHG-----LCSYGKLD 485
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 177/436 (40%), Gaps = 73/436 (16%)
Query: 224 LQKAEAYVETIPESLR-----GEVIYRTLLANCVQKNNVKKAEEIFNKMKDLD-FPLTAF 277
L KA+ V + S R G ++ L + + +++A + F+KMK FP T
Sbjct: 170 LSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTR- 228
Query: 278 ACNQLLLLYKK-----NDKRKIADVLLLMENENVKPSPLTYNILIDV------------- 319
+CN LL + K + KR D M +P+ TYNI+ID
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKD----MIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 320 ------KGLSKDIAGMDQIVD----------------KMKEEGLELDVKTKAVLVGHYIS 357
+GL D + ++D +MK+ E DV T L+ +
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW----KV-CVTNPYV 412
FG +EM+G LK N TL+ + G + + +V V N Y
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 413 EECLAAIEAWGKLNKIDEA-EAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKR 471
L I+A K+ + +A EML E + +A++ + + + + ++L +
Sbjct: 405 YTSL--IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGK 462
Query: 472 MADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKP---LFSSYIAILE 528
M +G +++A++ +V+A +++A +L + + +KP L+ ++I L
Sbjct: 463 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG----IKPDLLLYGTFIWGLC 518
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYGIR--DRLKGDNIYP 586
K I ++ + MK+ G + Y L+ AY K+ P G+ D +K +I
Sbjct: 519 SLEK---IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI-- 573
Query: 587 NRNLATLLAQVDGFRK 602
+ T +DG K
Sbjct: 574 EVTVVTFCVLIDGLCK 589
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 135/319 (42%), Gaps = 39/319 (12%)
Query: 252 VQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENEN---VKP 308
V+K A ++++M + F C+ ++ Y ++ A ++ E E+ ++
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA-MVFAKETESSLGLEL 259
Query: 309 SPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALL 368
+ +TYN LI+ + D+ GM +++ M E G+ +V T L+ Y GL ++AE +
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 369 KEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKI 428
+ ++ + L ++ + L+ Y G+ D R+
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHD------------------------ 355
Query: 429 DEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIV 488
M+ ++ C++++ Y L++ + + RM D + T++ +V
Sbjct: 356 -------NMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 489 KLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQ 548
Y AG V++A + + Q+ +V P +Y +L+ YS+ G H+ ++ M +
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQK----EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 549 AGYTSRIRQYQVLLQAYIK 567
G + LL+A K
Sbjct: 465 RGVNADEISCSTLLEALFK 483
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 121/298 (40%), Gaps = 40/298 (13%)
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
ME + + P+ YN LI + + + +V +++ GL V T L+ + + G+
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 361 EDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIE 420
DKA A EM + + N +C + L K D+ C+ + + +
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDE------ACLLLQKIVDFDLLLP 680
Query: 421 AWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSG-CRI 479
+ L + EA A + + K S +N + K L+ ++V +A +G C+
Sbjct: 681 GYQSLKEFLEASATTCLKTQKIAESVENSTP--------KKLLVPNNIVYNVAIAGLCKA 732
Query: 480 GPL---------------------TWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKP 518
G L T+ ++ AG++ KA ++ + + + P
Sbjct: 733 GKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKG----IIP 788
Query: 519 LFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYGIR 576
+Y A+++ K G++ ++++ +++ Q G T Y L+ +K+ A +R
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMR 846
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 155/369 (42%), Gaps = 27/369 (7%)
Query: 148 IMDAPGMAIHTALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFI 207
+M +P + + +ALD + G +S QE+ + + L R RN + +W E ++ E
Sbjct: 79 LMSSPQLVLDSALD---QSGLRVS-QEVVEDV-LNRFRNAGLLTYRFFQWSEKQRHYEHS 133
Query: 208 ERDYASRVDLIAKIHGLQKAEAYVETIPESLRGEV-IYRTLLANCVQKNNVKKAEEIFNK 266
R Y ++ AKI + + + + V + ++ + V +A FN
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNV 193
Query: 267 MKDLDFPLTAFACNQLL-LLYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKD 325
M+ D P A N LL L K + RK +V M + P TY+IL++ G +
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPN 252
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
+ ++ +M + G D+ T +++V G D+A +++ M+ K ++
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 386 LLPLYANLGKADDV----------GRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAF 435
L+ Y + ++ G V V N + I A+ K N++
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFN-------SLIGAFCKANRMKNVYRVL 365
Query: 436 -EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEA 494
EM S +SK+C+ +LR + D+ ++M C T+ ++K++ E
Sbjct: 366 KEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEK 424
Query: 495 GEVEKADSI 503
E+E AD +
Sbjct: 425 KEMETADKV 433
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 6/171 (3%)
Query: 419 IEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCR 478
+ A K + +A+ FE + + SK S +L + L K +++ + M D+GC
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 269
Query: 479 IGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHN 538
+T+ +V + +AG V++A I++ + KP Y ++ Y +
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSM----DPSICKPTTFIYSVLVHTYGTENRLEE 325
Query: 539 SEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL--PAYGIRDRLKGDNIYPN 587
+ F M+++G + + + L+ A+ KA Y + +K + PN
Sbjct: 326 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 376
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 128/306 (41%), Gaps = 22/306 (7%)
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
ME +K + ILID ++ + +++ +MK+ G+ +V T + L+ G
Sbjct: 39 MEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGR 98
Query: 361 EDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEECLA 417
AE L EM+ + + N L+ YA GK V ++K+ + +P V +
Sbjct: 99 LADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSS 158
Query: 418 AIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYAN-------HKMLMKGKDLVK 470
I N++DEA ++ + SK C+ + Y+ + G L+
Sbjct: 159 LIYGLCMHNRVDEAIKMLDL------MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLD 212
Query: 471 RMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQY 530
M G ++ + ++K Y +AG+++ A + T +N + P SY +L
Sbjct: 213 DMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT----SNGLIPNIRSYNIVLAGL 268
Query: 531 SKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL--PAYGIRDRLKGDNIYPNR 588
G++ + F M++ I Y +++ KA + AY + +LK + P+
Sbjct: 269 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 328
Query: 589 NLATLL 594
T++
Sbjct: 329 KAYTIM 334
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 188/455 (41%), Gaps = 55/455 (12%)
Query: 159 ALDKWVEEGKEMSRQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERD---YASRV 215
+D+ V G MS + + K N G+AL L +E E + D ++ V
Sbjct: 332 VMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE----EGLAPDKVMFSVMV 387
Query: 216 DLIAKIHGLQKA-EAYVETIPESLR---GEVIYRTLLANCVQKNNVKKAEEIFNKMKDLD 271
+ K ++KA E Y+ +S+R V+ T++ C++ + + A EIFN +
Sbjct: 388 EWFCKNMEMEKAIEFYMRM--KSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE-S 444
Query: 272 FPLTAFACNQLLLLYKKNDKRKIADVLL-LMENENVKPSPLTYNILIDVKGLSKDIAGMD 330
+ F CN++ LL+ K K A L +ME + ++P+ + YN ++ K++
Sbjct: 445 WIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLAR 504
Query: 331 QIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLY 390
I +M E+GLE + T ++L+ + E A ++ +M N + N + T++
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564
Query: 391 ANLGKADDVGRIWKVCVTNP-YVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNC 449
+G+ + + + Y C + K+ + ++A E
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETY----------- 613
Query: 450 SAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQ 509
+ M+++G +T+ +++ + ++ ++ A + T
Sbjct: 614 --------------------REMSENGKSPNVVTFTSLINGFCKSNRMDLA----LEMTH 649
Query: 510 QSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY--IK 567
+ + ++K +Y A+++ + K+ D+ + +F + + G + Y L+ + +
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Query: 568 AKLPAYGIRDRLKGDNIYPNRNLATLLAQVDGFRK 602
A + ++ D I + +L T +DG K
Sbjct: 710 KMDAAIDLYKKMVNDGI--SCDLFTYTTMIDGLLK 742
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 156/369 (42%), Gaps = 29/369 (7%)
Query: 210 DYASRVDLIAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKD 269
D +DL+ ++ G A ET Y +++ V++ N+++A + ++M
Sbjct: 289 DLVMALDLLREMRGKLGVPASQET----------YTSVIVAFVKEGNMEEAVRVMDEMVG 338
Query: 270 LDFPLTAFACNQLLLLY-KKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAG 328
P++ A L+ Y K N+ K D+ ME E + P + ++++++ + ++
Sbjct: 339 FGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEK 398
Query: 329 MDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWV-----C 383
+ +MK + + +VLV I L KAE+ +E N W+ C
Sbjct: 399 AIEFYMRMKS----VRIAPSSVLVHTMIQGCL--KAESPEAALEIFNDSFESWIAHGFMC 452
Query: 384 RTLLPLYANLGKADDVGRIWKVCV---TNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLS 439
+ L+ GK D K+ P V + A ++ +D A + F EML
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 440 GKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEK 499
E ++ S ++ + +K D++ +M S + ++ I+ + G+ K
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 500 ADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQ 559
A +LQ ++ + +SY +I++ + K GD ++ + + M + G + + +
Sbjct: 573 AKEMLQNLIKEKRYSMS---CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 560 VLLQAYIKA 568
L+ + K+
Sbjct: 630 SLINGFCKS 638
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 13/277 (4%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLL-----LYKKNDKRKIADV 297
+Y + L+N ++ +A IF ++ +L L C ++ L + + +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGL-LPDCVCYTTMIDGYCNLGRTDKAFQYFGA 433
Query: 298 LLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
LL N PS T ILI I+ + + MK EGL+LDV T L+ Y
Sbjct: 434 LLKSGN---PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLA 417
+K L+ EM + + L+ G D+ I + +V LA
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 418 AIEAWGKLNKIDEAEAAFEMLSGKTELSSK----NCSAMLRVYANHKMLMKGKDLVKRMA 473
+ G +K + + AF + +L K CSA+L Y + + K L ++
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQ 510
D+G + + ++ ++ Y G++EKA ++ Q+
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 13/277 (4%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLL-----LYKKNDKRKIADV 297
+Y + L+N ++ +A IF ++ +L L C ++ L + + +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGL-LPDCVCYTTMIDGYCNLGRTDKAFQYFGA 433
Query: 298 LLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
LL N PS T ILI I+ + + MK EGL+LDV T L+ Y
Sbjct: 434 LLKSGN---PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLA 417
+K L+ EM + + L+ G D+ I + +V LA
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 418 AIEAWGKLNKIDEAEAAFEMLSGKTELSSK----NCSAMLRVYANHKMLMKGKDLVKRMA 473
+ G +K + + AF + +L K CSA+L Y + + K L ++
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQ 510
D+G + + ++ ++ Y G++EKA ++ Q+
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 160/375 (42%), Gaps = 18/375 (4%)
Query: 191 ALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLRG----EVIYRT 246
ALQ W E I + + ++ ++ L A + +PE +G E ++
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPE--KGVPWDEDMFVV 190
Query: 247 LLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLL-LMENEN 305
L+ + + V+++ +IF KMKDL T + N L + + + +A M +E
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 306 VKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAE 365
V+P+ TYN+++ LS + + + MK G+ D T ++ + F D+AE
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAE 310
Query: 366 ALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN---PYVEECLAAIEAW 422
L EM+G + + T++ Y + + DD RI++ ++ P +
Sbjct: 311 KLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 423 GKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKM---LMKGKDLVKRMADSGCRI 479
K+ EA+ + + K ++ K+ S L++ + + +++K MA
Sbjct: 371 CDAGKMVEAKNILKNMMAK-HIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPA 429
Query: 480 GPLTWDAIVKLYVEAGEVEKA----DSILQKATQQSHANQVKPLFSSYIAILEQYSKRGD 535
+ +++ +A +A D++++K H + ++ S+Y I+E G
Sbjct: 430 EAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQ 489
Query: 536 IHNSEKIFYRMKQAG 550
+E +F ++ + G
Sbjct: 490 TAKAEVLFRQLMKRG 504
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/486 (18%), Positives = 194/486 (39%), Gaps = 65/486 (13%)
Query: 172 RQEISQAIFLLRKRNM---YGRALQLSEWLESKKQIE-FIERDYASRVDLIAKIHGLQKA 227
RQ+ SQ++ R M + R+ + ++ES +E + + Y V L K L K
Sbjct: 78 RQQHSQSLGF-RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTK---LIKG 133
Query: 228 EAYVETIPESLRGEVI-----------YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTA 276
+ IP+++R I Y L+ + N + A + ++M+ DF
Sbjct: 134 FFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDT 193
Query: 277 FACNQLLLLYKKNDKRKIA-DVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDK 335
N ++ K +A VL + ++N +P+ +TY ILI+ L + +++D+
Sbjct: 194 VTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE 253
Query: 336 MKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGK 395
M GL+ D+ T ++ G+ D+A +++ +E + + + LL N GK
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 396 ADDVGRIWKVCVTNPYVEECLAAIEAWGKL-------NKIDEAEAAFEMLSGK-TELSSK 447
++ ++ +T + E+C + + L KI+EA +++ K +
Sbjct: 314 WEEGEKL----MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 448 NCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKA 507
+ ++ + L + ++ M GC + ++ ++ + G+ ++A I K
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 508 TQ-------------------------------QSHANQVKPLFSSYIAILEQYSKRGDI 536
+ + +N + P +Y +++ + G +
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 537 HNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL--PAYGIRDRLKGDNIYPNRNLATLL 594
+ ++ M+ + + Y ++L + KA A + + + G+ PN T+L
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 595 AQVDGF 600
+ GF
Sbjct: 550 IEGIGF 555
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 131/309 (42%), Gaps = 23/309 (7%)
Query: 285 LYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKD--IAGMDQIVDKMKEEGLE 342
+ + D D+L ME NVK TY+ +ID L +D I + +M+ +G++
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIID--SLCRDGCIDAAISLFKEMETKGIK 260
Query: 343 LDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRI 402
V T LV G + LLK+M + N LL ++ GK + +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 403 WKVCVT---NPYVEECLAAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYAN 458
+K +T +P + ++ + N++ EA + M+ K +++++ Y
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 459 HKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKP 518
K + G + + ++ G +T+ +V+ + ++G+++ A+ + Q+ SH V P
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV--SHG--VLP 436
Query: 519 LFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK----------- 567
+Y +L+ G + + +IF ++++ I Y +++ K
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 568 AKLPAYGIR 576
LP G++
Sbjct: 497 CSLPCKGVK 505
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 125/280 (44%), Gaps = 13/280 (4%)
Query: 293 KIADVLLL---MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKA 349
K+++ ++L M +P +TYN +++ S D + ++ KM+E ++ DV T +
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 350 VLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN 409
++ G D A +L KEME + +K + +L+ GK +D + K V+
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 410 PYVEECLA---AIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKG 465
V + ++ + K K+ EA + EM++ + + ++ Y L +
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 466 KDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSH-ANQVKPLFSSYI 524
+++ M + C +T+ +++K Y V+ + + +++ AN V +Y
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-----TYS 407
Query: 525 AILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQA 564
+++ + + G I +E++F M G + Y +LL
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 113/272 (41%), Gaps = 20/272 (7%)
Query: 307 KPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEA 366
+P T+N LI L ++ +VD+M E G + DV T +V G A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 367 LLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWK----------VCVTNPYVEECL 416
LL++ME N+K + + T++ G D ++K V N V
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 417 AAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSG 476
A GK N D A +M+S + + + +L V+ L + +L K M G
Sbjct: 275 KA----GKWN--DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 477 CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDI 536
+T++ ++ Y + +A+++L + N+ P ++ ++++ Y +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR----NKCSPDIVTFTSLIKGYCMVKRV 384
Query: 537 HNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
+ K+F + + G + Y +L+Q + ++
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 142/334 (42%), Gaps = 13/334 (3%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLL-LLYKKNDKRKIADVLLL 300
V Y T++ ++N + E+F KM L N+LL +L KK D ++ +L
Sbjct: 182 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 241
Query: 301 MENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
+ V P+ TYN+ I +GL + ++ G ++V + E+G + DV T L+
Sbjct: 242 VIKRGVLPNLFTYNLFI--QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL-- 416
+AE L +M E L+ + + TL+ Y G RI V N +V +
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 417 -AAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
+ I+ + + A A F E L + + + +++ +N M+++ L M++
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
G T++ +V + G V AD +++ + + P ++ ++ YS +
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF----PDIFTFNILIHGYSTQL 475
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
+ N+ +I M G + Y LL K
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 165/421 (39%), Gaps = 60/421 (14%)
Query: 221 IHGLQKAEAY---VETIPESLRG-----EVIYRTLLANCVQKNNVKKAEEIFNKMKDLDF 272
I+GL K Y E E LR YR+LL +K +V + E++F+ M+ D
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 273 PLTAFACNQLLLLYKKNDKRKIADVLLLMENENVK-----PSPLTYNILI---------- 317
+ ++ L+ ++ A LM +VK P + Y ILI
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKA----LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 318 ----------------DVKGLSKDIAGM---------DQIVDKMKEEGLELDVKTKAVLV 352
DV + + G+ D++ ++M E L D T +L+
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 353 GHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYV 412
+ G A L ++M+ + ++ + TLL + +G D IW V+ +
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 413 EECLA---AIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDL 468
++ + A + EA + EM+S + + C++M++ Y G+
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 469 VKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILE 528
+++M G ++++ ++ +V + KA +++K ++ + P +Y +IL
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG--LVPDVFTYNSILH 665
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK--LPAYGIRDRLKGDNIYP 586
+ ++ + +E + +M + G Y ++ ++ A+ I D + P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 587 N 587
+
Sbjct: 726 D 726
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 159/352 (45%), Gaps = 29/352 (8%)
Query: 218 IAKIHGLQKAEAYVETIPESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAF 277
+ K+ + +A + +PE R V + ++ ++ ++++A E+F+++ +T
Sbjct: 56 LCKVGKIAEARKLFDGLPE--RDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWT 113
Query: 278 ACNQLLLLYKKNDKRKIADVLLL-MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKM 336
A ++ Y ++ + IA++L M NV +++N +ID S I ++ D+M
Sbjct: 114 A---MVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 337 KEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKA 396
E ++ + +V + G D+A L + M ++ W ++ A GK
Sbjct: 167 PER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS--WT--AMVDGLAKNGKV 218
Query: 397 DDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVY 456
D+ R++ C+ + A I + + N+IDEA+ F+++ + + +S N M+ +
Sbjct: 219 DEARRLFD-CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER-DFASWN--TMITGF 274
Query: 457 ANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQV 516
++ + K L RM + ++W ++ YVE E E+A ++ K + V
Sbjct: 275 IRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDG---SV 327
Query: 517 KPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
KP +Y++IL S + ++I + ++ + LL Y K+
Sbjct: 328 KPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKS 379
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 145/369 (39%), Gaps = 52/369 (14%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKN-------------- 289
Y T+ + K +K+A KM++ F L A++ N L+ L K+
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 290 -------------------DKRKIADVLLL---MENENVKPSPLTYNILIDVKGLSKDIA 327
+R I V+ L ME +KP+ T+ I I V G + I
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 328 GMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLL 387
+I+ +M +EG DV T VL+ + D A+ + ++M+ K +R TLL
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 388 PLYANLGKADDVGRIWKVCVTNPYVEECLA---AIEAWGKLNKIDEAEAAFEMLSGKTEL 444
+++ D V + W + +V + + ++A K EA +++ + L
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 445 SSKNC-----SAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEK 499
+ + +LRV+ L +L M G + T+ + Y ++G+
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDAL----ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 500 ADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQ 559
A +K + + P + A L +K G +++IFY +K G Y
Sbjct: 452 ALETFEKMKTKG----IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 560 VLLQAYIKA 568
++++ Y K
Sbjct: 508 MMMKCYSKV 516
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 130/333 (39%), Gaps = 13/333 (3%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL- 300
V Y L+ + A+E+F KMK + LL + +D R + V
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT--YITLLDRFSDNRDLDSVKQFW 351
Query: 301 --MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
ME + P +T+ IL+D + + +D M+++G+ ++ T L+ +
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN---PYVEEC 415
D A L ME +K + + Y G + ++ T P + C
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 416 LAAIEAWGKLNKIDEAEAAFEMLSGKTEL-SSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
A++ + K + EA+ F L + S + M++ Y+ + + L+ M +
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
+GC + ++++ +A V++A + + + ++KP +Y +L K G
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM----KLKPTVVTYNTLLAGLGKNG 587
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
I + ++F M Q G + L K
Sbjct: 588 KIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 127/311 (40%), Gaps = 24/311 (7%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY-KKNDKRKIADVLLLME 302
Y TL+ ++ + + A E+F M+ L TA+ + Y K D + M+
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMD----QIVDKMKEEGLELDVKTKAVLVGHYISF 358
+ + P+ + N + L+K AG D QI +K+ GL D T +++ Y
Sbjct: 461 TKGIAPNIVACNA--SLYSLAK--AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV------TNPYV 412
G D+A LL EM + + V +L+ L KAD V WK+ + P V
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLI---NTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 413 EECLAAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKR 471
+ GK KI EA FE M+ ++ + + + + ++ +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 472 MADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYS 531
M D GC T++ I+ V+ G+V++A + + V P F + +L
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-----LVYPDFVTLCTLLPGVV 688
Query: 532 KRGDIHNSEKI 542
K I ++ KI
Sbjct: 689 KASLIEDAYKI 699
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 157/394 (39%), Gaps = 32/394 (8%)
Query: 216 DLIAKI---HGLQKAEAYVETIPES---LRGEVIYRTLLANCVQKNNVKKAEEIFNKM-K 268
DLI I G+ A ++ E + + G+ I ++ + NNV A +F K K
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 269 DLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLLMENENVKPSPLTYNILIDVKGLSKDIA 327
DL N L+ + D +IA DV L +++ P TYN L+D G S I
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 328 GMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLL 387
+ ++ +M E + T +++ + G D A L ++ + + T
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD--RDFSPTACTYG 895
Query: 388 PLYANLGKADDVGRIWKV-----------CVTNPYVEECLAAIEAWGKLNKIDEAEAAFE 436
PL L K+ GR+++ C N + L I +GK + D A A F+
Sbjct: 896 PLIDGLSKS---GRLYEAKQLFEGMLDYGCRPNCAIYNIL--INGFGKAGEADAACALFK 950
Query: 437 -MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAG 495
M+ K S ++ + +G K + +SG + ++ I+ ++
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 496 EVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRI 555
+E+A L + + + P +Y +++ G + + KI+ +++AG +
Sbjct: 1011 RLEEA---LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 556 RQYQVLLQAYIKAKLP--AYGIRDRLKGDNIYPN 587
+ L++ Y + P AY + + PN
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/389 (19%), Positives = 148/389 (38%), Gaps = 63/389 (16%)
Query: 215 VDLIAKIHGLQKAE--AYVETIPESLRGE------VIYRTLLANCVQKNNVKKAEEIFNK 266
V A IH KA+ +Y + E++ E V Y L+ + V+KA +IF +
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 267 M-KDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKD 325
M D P Q Y N +R P+ +TY L+D S
Sbjct: 614 MCGSKDVPDVDMYFKQ----YDDNSER---------------PNVVTYGALLDGFCKSHR 654
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
+ +++D M EG E + L+ G D+A+ + EM + +
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 386 LLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELS 445
L+ Y + + D ++ + N + E L K+ + + A++
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK--------- 765
Query: 446 SKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQ 505
L++ M + GC+ +T+ A++ + G++E +L+
Sbjct: 766 ----------------------LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 506 KATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
+ + V P + +Y +++ K G + + + MKQ + + Y+ +++ +
Sbjct: 804 RMGSKG----VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Query: 566 IKAKLPAYGIRDRLKGDNIYPNRNLATLL 594
K + + G+ D + D+ P ++ LL
Sbjct: 860 NKEFIESLGLLDEIGQDDTAPFLSVYRLL 888
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 164/433 (37%), Gaps = 36/433 (8%)
Query: 168 KEMSRQEISQAIFLLRKRNMYGRAL-QLSEWLESKKQIEFIERDYASRVDLIAKIHGLQK 226
+EMS + F LR + +L ++ +W E+ +E E V I GL +
Sbjct: 259 REMSLANLRMDGFTLR---CFAYSLCKVGKWREALTLVE-TENFVPDTVFYTKLISGLCE 314
Query: 227 AEAYVETI--------PESLRGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFA 278
A + E + L V Y TLL C+ K + + + + N M +
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 279 CNQLLLLYKKNDKRKIADVLLL-MENENVKPSPLTYNILIDVKGLSKDIAGMD--QIVDK 335
N L+ Y + A LL M P + YNILI KD D + +K
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 336 MKEEGLELDVKTKAVLVGHY----ISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYA 391
E L V + V + S G +KA ++++EM G+ + +L
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 392 NLGKADDVGRIWKVCVTNPYVEECLA---AIEAWGKLNKIDEAEAAF-EMLSGKTELSSK 447
N K + +++ V + ++++ K I++A F EM +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 448 NCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKA 507
+A++ Y K + +L + M GC +T+ A++ + +AG+VEKA I ++
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 508 T------------QQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRI 555
+Q N +P +Y A+L+ + K + + K+ M G
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 556 RQYQVLLQAYIKA 568
Y L+ K
Sbjct: 675 IVYDALIDGLCKV 687
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
Query: 428 IDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDA 486
+D AE A+ EML+ L+ N S+ R + K +++ M G T+
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 487 IVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRM 546
++ A ++E A + ++ + V +Y +++ + K G I + K F M
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVY----TYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 547 KQAGYTSRIRQYQVLLQAYIKAKLPAYG--IRDRLKGDNIYPNRNLATLLAQVDGFRK 602
++ G T + Y L+ AY+KAK +Y + + + + P N+ T A +DG K
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP--NIVTYSALIDGHCK 600
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 135/328 (41%), Gaps = 38/328 (11%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLL-LLYKKNDKRKIADVLLLME 302
Y ++++ + VK+A E+ ++M D N L+ L K+N + ++ ++
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
++ + P T+N LI L+++ ++ ++M+ +G E D T +L+ S G D
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAW 422
+A +LK+ME ++ TL I+ +
Sbjct: 453 EALNMLKQMELSGCARSVITYNTL--------------------------------IDGF 480
Query: 423 GKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGP 481
K NK EAE F EM +S + ++ + + L+ +M G +
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 482 LTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEK 541
T+++++ + G+++KA I+Q T +N +P +Y ++ K G + + K
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMT----SNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 542 IFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
+ ++ G Y ++Q + +
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 23/237 (9%)
Query: 164 VEEGKEMSRQEISQAIF------------LLRKRNMYGRALQLSEWLESKKQIEFIERDY 211
VEE E++R S+ I L RN + A++L E + SK E E Y
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN-HRVAMELFEEMRSKG-CEPDEFTY 438
Query: 212 ASRVDLIAKIHGLQKAEAYVETIPES--LRGEVIYRTLLANCVQKNNVKKAEEIFNKMKD 269
+D + L +A ++ + S R + Y TL+ + N ++AEEIF++M+
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 270 LDFPLTAFACNQLLLLYKKNDKRKIADVLLLMEN---ENVKPSPLTYNILIDVKGLSKDI 326
+ N L+ K+ R++ D LM+ E KP TYN L+ DI
Sbjct: 499 HGVSRNSVTYNTLIDGLCKS--RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 327 AGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLK--EMEGENLKQNRW 381
IV M G E D+ T L+ G + A LL+ +M+G NL + +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 139/333 (41%), Gaps = 34/333 (10%)
Query: 237 SLRGEVIYRTLLANCVQKN-NVKKAEEIFNKMKDLDFPLTAFACNQLLL-LYKKNDKRKI 294
+ V+ T L C+ KN ++ A E+FN+M N L+ L +
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 295 ADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGH 354
A +L M ++P+ +T+ LID + ++ + M + + DV T L+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 355 YISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW-----KVCVTN 409
+GL D+A + ME N + TL+ + + +D +I+ K V N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 410 PYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVY--------ANHKM 461
L I+ + + + D A+ F ++SS+ +R Y N K+
Sbjct: 363 TITYTVL--IQGYCLVGRPDVAQEVFN------QMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 462 ---LMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKP 518
LM + + KR D I +T+ I++ + G+VE A + + +KP
Sbjct: 415 EKALMIFEYMRKREMD----INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG----MKP 466
Query: 519 LFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGY 551
+Y ++ + +RG IH ++ +F +MK+ G+
Sbjct: 467 NVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 128/343 (37%), Gaps = 29/343 (8%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKM-KDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLME 302
YR +L N + A ++F +M P L ++ K N + + M+
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
+ P T NI++ LS + KM + G E D+ T L+ Y + +
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 363 KAEALLKEMEGENLKQN--------RWVCRT-----LLPLYANLGKADDVGRIWKVCVTN 409
A AL ++ G K N R +C+ + L+ +G + VT
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV----VTY 226
Query: 410 PYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLV 469
+ L I WG D A +M+ + E + +A++ + LM+ K+L
Sbjct: 227 NALVTGLCEIGRWG-----DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 470 KRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQ-SHANQVKPLFSSYIAILE 528
M T+ +++ G +++A + + + N+V Y ++
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV-----IYTTLIH 336
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP 571
+ K + + KIFY M Q G + Y VL+Q Y P
Sbjct: 337 GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 130/332 (39%), Gaps = 42/332 (12%)
Query: 241 EVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL 300
E+ + L+ + N AE + + + + + L+ Y + K A+ +
Sbjct: 139 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 198
Query: 301 -MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKM---KEEGLELDVKTKAVLVGHYI 356
M++ +PS +TY I++ +++ + + K+ L+ D K +++ Y
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 357 SFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL 416
G +KA + M G+ + Q+ +L+ + + + + P V
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYA 318
Query: 417 AAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSG 476
I+A+G+ + +EA + FE M D+G
Sbjct: 319 LLIKAYGRARREEEALSVFE----------------------------------EMLDAG 344
Query: 477 CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDI 536
R ++ ++ + +G VE+A ++ + + +++ P SY +L Y D+
Sbjct: 345 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR----DRIFPDLWSYTTMLSAYVNASDM 400
Query: 537 HNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
+EK F R+K G+ I Y L++ Y KA
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 432
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 40/316 (12%)
Query: 240 GEVIYRTLLANCVQKNNVKKAEEIF-NKMKDLDFPLTAFACNQLLLLYKKN----DKRKI 294
G + YRT++ N + KN +A E+F +K+ + F L + LLL + + D K+
Sbjct: 194 GMIDYRTIV-NALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKV 252
Query: 295 ADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQ---IVDKMKEEGLELDVKTKAVL 351
DV+ + P+ ++Y+ILI GL ++ +++ + D+M E+G + +T VL
Sbjct: 253 FDVM--SKEVTCAPNSVSYSILI--HGLC-EVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 352 VGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN-- 409
+ GL DKA L EM K N L+ GK ++ + + V +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 410 -PYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKG--- 465
P V A I + K ++ AFE+L T + + C +R + LM+G
Sbjct: 368 FPSVITYNALINGYCKDGRV---VPAFELL---TVMEKRACKPNVRTFNE---LMEGLCR 418
Query: 466 -------KDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKP 518
L+KRM D+G ++++ ++ G + A +L + ++P
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM----NCFDIEP 474
Query: 519 LFSSYIAILEQYSKRG 534
++ AI+ + K+G
Sbjct: 475 DCLTFTAIINAFCKQG 490
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 149/395 (37%), Gaps = 77/395 (19%)
Query: 232 ETIPESLRGEV-IYRTLLANCVQKNNVKKAEEIFNKM-KDLDFPLTAFACNQLLLLYKKN 289
E IP + V Y L+ + +++A + KM KD FP + N L+ Y K+
Sbjct: 326 EMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP-SVITYNALINGYCKD 384
Query: 290 DKRKIA-DVLLLMENENVKPSPLTYNILIDV-------------------KGLSKDIAGM 329
+ A ++L +ME KP+ T+N L++ GLS DI
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 330 DQIVDKMKEEG----------------LELDVKTKAVLVGHYISFGLEDKAEALLKEMEG 373
+ ++D + EG +E D T ++ + G D A A L M
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 374 ENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV-----TNPY--------------VEE 414
+ + + TL+ +GK D I + V T P+ V+E
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 415 CLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMAD 474
LA + KL + ++ G + S + + R+ ++ M
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGL--IRSGDITGSFRI-------------LELMKL 609
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
SGC + I+ + G VE+A+ +L A Q S V P +Y +++ Y G
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLS-AMQDS---GVSPNHVTYTVMVKGYVNNG 665
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
+ + + M + GY R Y LLQ ++ ++
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQ 700
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 116/279 (41%), Gaps = 9/279 (3%)
Query: 293 KIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLV 352
++ ++L M KP Y +I ++ ++ D+M+ + ++ DV LV
Sbjct: 281 EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLV 340
Query: 353 GHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYV 412
G ++ L EM+G+ + +R + R L+ + GK +W+ V + Y+
Sbjct: 341 VGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYI 400
Query: 413 EECL---AAIEAWGKLNKIDEAEAAFEM-LSGKTELSSKNCSAMLRVYANHKMLMKGKDL 468
+ A I+ +N++D+A F++ + + E + S ++ Y L ++
Sbjct: 401 ADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNV 460
Query: 469 VKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILE 528
++R+ + G + L + + A + + H + S Y ++E
Sbjct: 461 LERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGS-----VSVYNILME 515
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
K GDI S +FY M++ G+ Y + + +++
Sbjct: 516 ALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVE 554
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 145/344 (42%), Gaps = 35/344 (10%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL--- 300
Y +L+ +V + + +++K +FP+T A N L+ K K + + LL
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALI---KSFGKLGMVEELLWVWR 211
Query: 301 -MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFG 359
M+ ++P+ TYN L++ + + +++ + M+ ++ D+ T ++ Y G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 360 LEDKAEALLKEMEGENLKQNRWVCRTLL-PLYANLGKADDVGRIWKVCV----------- 407
KA L++ME + ++ T++ YA+ D G CV
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYAD----SDFGS----CVALYQEMDEKGI 323
Query: 408 -TNPYVEECLAAIEAWGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKG 465
P+ + I K K++E FE M+ ++ + + ++ YA +
Sbjct: 324 QVPPHAFSLV--IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 466 KDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIA 525
L+ RM D G + +T+ +V + G VE+A T + + +F Y +
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH--TCRFDGLAINSMF--YSS 437
Query: 526 ILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
+++ K G + +E++F M + G T Y L+ A+ K +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHR 481
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 241 EVIYRTLLANCVQKNNVKKAEEIFNKM--KDLDFPLTAFACNQLLLLYKKNDKRKIADVL 298
++ Y T++ C ++ ++ +M K + P AF+ L++ + K+ +
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS----LVIGGLCKEGKLNEGY 347
Query: 299 LLMEN---ENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHY 355
+ EN + KP+ Y +LID S + +++ +M +EG + DV T +V+V
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Query: 356 ISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW-----KVCVTNP 410
G ++A + L N +L+ G+ D+ R++ K C +
Sbjct: 408 CKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 467
Query: 411 YVEECLAAIEAWGKLNKIDEAEAAFEML 438
Y A I+A+ K K+DEA A F+ +
Sbjct: 468 YCYN--ALIDAFTKHRKVDEAIALFKRM 493
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 126/317 (39%), Gaps = 46/317 (14%)
Query: 293 KIADVLLL---MENENVKPSPLTYNILID------------------------------- 318
+I+D + L M KP +T+ LI
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 319 --VKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGE 374
V GL K D +++KM+ +E +V + ++ + ED A L EME +
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 375 NLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEECLAAIEAWGKLNKIDEA 431
++ N +L+ N G+ D R+ + NP + A I+A+ K K+ +A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 432 EAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKL 490
E + EM+ + + S+++ + L + K +++ M C +T++ ++
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 491 YVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAG 550
+ +A V+K + ++ +Q+ +Y ++ + + D N++ +F +M G
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNT----VTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 551 YTSRIRQYQVLLQAYIK 567
I Y +LL K
Sbjct: 459 VHPNILTYNILLDGLCK 475
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 145/332 (43%), Gaps = 20/332 (6%)
Query: 242 VIYRTLL-ANCVQKNNVK--KAEEIFNKM--KDLDFPLTAFACNQLLLLYKKNDKRKIA- 295
V Y TL+ C N K KA+ + +M D+ LT F N L+ + K+D +
Sbjct: 259 VSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTF--NILIDGFWKDDNLPGSM 316
Query: 296 DVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHY 355
V M +++VKP+ ++YN LI+ I+ + DKM G++ ++ T L+ +
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 356 ISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWK------VCVTN 409
+ +A + ++G+ + L+ Y LGK DD G K V +
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDD-GFALKEEMEREGIVPD 435
Query: 410 PYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLV 469
CL I + I+ A+ F+ L+ K ++ Y K L+
Sbjct: 436 VGTYNCL--IAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 470 KRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQ 529
K M+ G + LT++ ++K Y + G ++ A ++ TQ +++ +SY +L+
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM---RTQMEKERRLRMNVASYNVLLQG 550
Query: 530 YSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVL 561
YS++G + ++ + M + G Y+++
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/314 (18%), Positives = 135/314 (42%), Gaps = 13/314 (4%)
Query: 262 EIFNKMKDLDFPLTAFACNQLLL-LYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVK 320
E F + + L+A +C L++ L K+N + V M ++P+ T+N++I+
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 321 GLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED---KAEALLKEMEGENLK 377
+ + +++ MK G +V + L+ Y G KA+A+LKEM ++
Sbjct: 234 CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVS 293
Query: 378 QNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEECLAAIEAWGKLNKIDEAEAA 434
N L+ + +++K + P V + I KI EA +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 435 FE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVE 493
+ M+S + + +A++ + + ML + D+ + G ++ ++ Y +
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 494 AGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTS 553
G+++ ++ ++ ++ + P +Y ++ + G+I ++K+F ++ G
Sbjct: 414 LGKIDDGFALKEEMEREG----IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPD 469
Query: 554 RIRQYQVLLQAYIK 567
+ + +L++ Y +
Sbjct: 470 LV-TFHILMEGYCR 482
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 130/332 (39%), Gaps = 42/332 (12%)
Query: 241 EVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL 300
E+ + L+ + N AE + + + + + L+ Y + K A+ +
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 205
Query: 301 -MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKM---KEEGLELDVKTKAVLVGHYI 356
M++ +PS +TY I++ +++ + + K+ L+ D K +++ Y
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 265
Query: 357 SFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL 416
G +KA + M G+ + Q+ +L+ + + + + P V
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 417 AAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSG 476
I+A+G+ + +EA + FE M D+G
Sbjct: 326 LLIKAYGRARREEEALSVFE----------------------------------EMLDAG 351
Query: 477 CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDI 536
R ++ ++ + +G VE+A ++ + + +++ P SY +L Y D+
Sbjct: 352 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR----DRIFPDLWSYTTMLSAYVNASDM 407
Query: 537 HNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
+EK F R+K G+ I Y L++ Y KA
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 439
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 144/319 (45%), Gaps = 18/319 (5%)
Query: 241 EVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLL-LLYKKNDKRKIADVLL 299
V Y TL+ + + N + A ++++M P+ L+ L+K D R+
Sbjct: 294 HVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Query: 300 LMENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
++ +N P+ +TY L+D GL K D++ + I+ +M E+ + +V T + ++ Y+
Sbjct: 354 MLLEDNQVPNVVTYTALVD--GLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWK----VCV-TNPYV 412
G+ ++A +LL++ME +N+ N + T++ GK + + K + V N Y+
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 413 EECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKR 471
+ L + ++ +I E + +M+S L N ++++ V+ +
Sbjct: 472 LDAL--VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 529
Query: 472 MADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYS 531
M + G + WD + + +G ++ A + ++P +++ ++
Sbjct: 530 MQERG-----MPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQR 584
Query: 532 KRGDIHNSEKIFYRMKQAG 550
K+GD K++ +MK G
Sbjct: 585 KQGDSEGILKLWDKMKSCG 603
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 133/336 (39%), Gaps = 26/336 (7%)
Query: 247 LLANCVQK-NNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL---ME 302
+L NC + + + A KM L + LL + + D+ + D L + M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR--VYDALYMFDQMV 178
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
KP+ + YN +ID SK + ++++M+++G+ DV T L+ S G
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEECLAAI 419
A ++ M + + + L+ G+ + ++ + +P + I
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 420 EAWGKLNKIDEAEAAFEMLSGKTELSSKNC-------SAMLRVYANHKMLMKGKDLVKRM 472
+++DEAE F + SK C S ++ Y K + G L M
Sbjct: 299 YGLCMYSRLDEAEEMFGF------MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 473 ADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSK 532
+ G +T+ +++ Y AG++ A+ I ++ V P +Y +L
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG----VHPNIITYNVLLHGLCD 408
Query: 533 RGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
G I + I M++ G + I Y ++++ KA
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 121/280 (43%), Gaps = 22/280 (7%)
Query: 300 LMENENVKPSPLTYNILIDVKGLSKD-IAGMD-QIVDKMKEEGLELDVKTKAVLVGHYIS 357
++ + + P TYN LI G K+ + G+ +++ M+ +G + +V + +LV +
Sbjct: 379 MVTSYGIVPDVCTYNSLI--YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW-----KVCVTNPYV 412
G D+A +L EM + LK N L+ + + + I+ K C + Y
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 413 EECLAAIEAWGKLNKIDEAEAAF----EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDL 468
L + L ++DE + A +M+S ++ + ++ + + + + L
Sbjct: 497 FNSLIS-----GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 469 VKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILE 528
V M G + +T+++++K AGEV+KA S+ +K + HA P S ++
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA----PSNISCNILIN 607
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
+ G + + + M G T I + L+ +A
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 163/367 (44%), Gaps = 21/367 (5%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLL-LLYKKNDKRKIADVLLL 300
VIY TL+ C +K ++KA+++F +M L L+ L+K K++ ++
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMD--QIVDKMKEEGLELDVKTKAVLVGHYISF 358
M+ + V P+ TYN +++ L KD D Q+ D+M+E G+ ++ T L+G
Sbjct: 259 MQEDGVFPNLYTYNCVMN--QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVC--VTNPYVEECL 416
++A ++ +M+ + + N TL+ + +GK +G+ +C + + + L
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK---LGKALSLCRDLKSRGLSPSL 373
Query: 417 AA--IEAWGKLNKIDEAEAA---FEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKR 471
I G K D + AA EM + S + ++ +A + K L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 472 MADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYS 531
M + G T+ ++ + G++ +A + + +++ +P Y ++ Y
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN----CEPNEVIYNTMILGYC 489
Query: 532 KRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP--AYGIRDRLKGDNIYPNRN 589
K G + + K+ M++ + Y+ +++ K + A + +++ I P+ +
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Query: 590 LATLLAQ 596
+ +L+++
Sbjct: 550 ILSLISR 556
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 146/350 (41%), Gaps = 68/350 (19%)
Query: 256 NVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMENENVK----PSPL 311
N +A E+ +MK++ + + N L+ N ++A +E VK P+
Sbjct: 307 NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA---FAYRDEMVKQGMVPTFY 363
Query: 312 TYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEM 371
TYN LI + I + ++ +++E+G+ LD T +L+ Y G KA AL EM
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 372 EGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEA 431
+ ++ ++ +L I+ +C + NK EA
Sbjct: 424 MTDGIQPTQFTYTSL---------------IYVLC-----------------RKNKTREA 451
Query: 432 EAAFEMLSGK---------TELSSKNCSA--MLRVYANHKMLMKGKDLVKRMADSGCRIG 480
+ FE + GK L +C+ M R ++ L+K D++ D
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS----LLKEMDMMSINPDD----- 502
Query: 481 PLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSE 540
+T++ +++ G+ E+A ++ + ++ +KP SY ++ YSK+GD ++
Sbjct: 503 -VTYNCLMRGLCGEGKFEEARELMGEMKRRG----IKPDHISYNTLISGYSKKGDTKHAF 557
Query: 541 KIFYRMKQAGYTSRIRQYQVLLQAYIK---AKLPAYGIRDRLKGDNIYPN 587
+ M G+ + Y LL+ K +L +R+ +K + I PN
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE-MKSEGIVPN 606
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 128/296 (43%), Gaps = 9/296 (3%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLME 302
++ T++ C +K NVK A + F+ M + L+ LY+KN + A+
Sbjct: 212 VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHM 271
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
+ Y+ +I + + ++++D MK++ + L ++ V++ Y G +
Sbjct: 272 RKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKME 331
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDV-GRIWKVCVTN--PYVEECLAAI 419
AE++L ME N TL+ Y + K + G ++C P + I
Sbjct: 332 LAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMI 391
Query: 420 EAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCR 478
E WG+ + +EA+ + E+ + +S N ++ + A + ++ M GC+
Sbjct: 392 EGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQ 451
Query: 479 IGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
+ I++ Y + G+++ +L+ S N ++ +S+ +++ Y K G
Sbjct: 452 YSSIL-GIILQAYEKVGKIDVVPCVLKG----SFHNHIRLNQTSFSSLVMAYVKHG 502
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 154/373 (41%), Gaps = 37/373 (9%)
Query: 216 DLIAKIHGLQKAEAYVETIPESLRGEVIYR----------TLLANCVQKNNVKKAEEIFN 265
DLIAK LQ E + + LR + Y+ LL Q N +A+++F+
Sbjct: 97 DLIAKKQWLQALEVF-----DMLREQTFYQPKEGTYMKLLVLLGKSGQPN---RAQKLFD 148
Query: 266 KMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLMEN----ENVKPSPLTYNILIDVKG 321
+M + T LL Y +++ I D +++ +P TY+ L+
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNL--IDDAFSILDKMKSFPQCQPDVFTYSTLLKACV 206
Query: 322 LSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEM-EGENLKQNR 380
+ +D + +M E + + T+ +++ Y G D+ E +L +M K +
Sbjct: 207 DASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDV 266
Query: 381 WVCRTLLPLYANLGKADDVGRIWKVCVTN----PYVEECLAAIEAWGKLNKIDEAEAAFE 436
W +L ++ N+GK D + W N P I ++GK D+ + E
Sbjct: 267 WTMNIILSVFGNMGKID-MMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVME 325
Query: 437 MLSGKTEL--SSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEA 494
+ K E ++ + ++ +A+ + +M G + T+ ++ Y A
Sbjct: 326 YMR-KLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANA 384
Query: 495 GEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSR 554
G K S +Q A + ++ + Y A++ +K D+ E+++ RMK+
Sbjct: 385 GLFHKVISSVQLAAK----FEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCD 440
Query: 555 IRQYQVLLQAYIK 567
R ++++++AY K
Sbjct: 441 SRTFEIMVEAYEK 453
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 10/278 (3%)
Query: 299 LLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISF 358
+L E +P TY L+ + G S ++ D+M EEGLE V+ L+ Y
Sbjct: 113 MLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRS 172
Query: 359 GLEDKAEALLKEMEG-ENLKQNRWVCRTLLPLYANLGKADDVGRIWKVC---VTNPYVEE 414
L D A ++L +M+ + + + TLL + + D V ++K + P
Sbjct: 173 NLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVT 232
Query: 415 CLAAIEAWGKLNKIDEAEAAFE--MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRM 472
+ +G++ + D+ E ++S + + +L V+ N + + ++
Sbjct: 233 QNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKF 292
Query: 473 ADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSK 532
+ G T++ ++ Y + +K S+++ + S+Y I+E ++
Sbjct: 293 RNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTT----STYNNIIEAFAD 348
Query: 533 RGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL 570
GD N E F +M+ G + + + L+ Y A L
Sbjct: 349 VGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGL 386
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 166/423 (39%), Gaps = 58/423 (13%)
Query: 192 LQLSEWLESKKQIEFIE--------RDYASRVDLIAKIHGLQKAEAYVETI-PESLRGEV 242
++ +W++ + + E + Y + + K +KA +++ + E + +V
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 243 I-YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLL-- 299
Y T++ + + + A E+F++M + N L+ + K K A L
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 300 LMENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
L+E+ +V P+ T+NI+I GLSK + +I ++MK+ E D+ T + L+
Sbjct: 245 LLEDSSVYPNVKTHNIMI--SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLA 417
G DKAE++ E++ + T+L + GK + +W++ V
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSY 362
Query: 418 AIEAWGKL--NKIDEAEAAFEMLSGKTELSSKNCSAM----------------------- 452
I G L KIDEA + ++ K + K +
Sbjct: 363 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 453 ----LRVYA---------NHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEK 499
L VYA K L + +LVK M+ G + +A++ + + +
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 500 ADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQ 559
A L++ + N +P SY ++ K G + M + G+ ++ Y
Sbjct: 483 ASFFLREMGK----NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 560 VLL 562
+LL
Sbjct: 539 ILL 541
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 32/324 (9%)
Query: 217 LIAKIHGLQKAEAYVET--IPESLRGE---VIYRTLLANCVQKNNVKKAEEIFNKMKDLD 271
LI + G+ KAE +E + E V Y TL+ + N + KA E+F +K
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK--- 268
Query: 272 FPLTAFACNQLLLLY--------KKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLS 323
+ C+ ++ Y K R+ + +L M + P+ +T+N+L+D +
Sbjct: 269 ---SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 324 KDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVC 383
++ ++I KM G DV T L+ Y G + L +EM + N +
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 384 RTLLPLYAN---LGKADD-VGRIW-KVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEML 438
L+ N L KA + +G++ K + P++ I+ + K K++EA E +
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYN--PVIDGFCKAGKVNEANVIVEEM 443
Query: 439 SGKTELSSKNCSAMLRVYANHKM---LMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAG 495
K K +L + H M + + + +M GC +T +++ ++AG
Sbjct: 444 EKKKCKPDKITFTILII--GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Query: 496 EVEKADSILQKATQQSHANQVKPL 519
++A + Q A ++ +N V PL
Sbjct: 502 MAKEAYHLNQIA-RKGQSNNVVPL 524
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 15/249 (6%)
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAA 418
GL D A + + M+ + + N + L+ +A GK + + + VE C
Sbjct: 117 GLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL---LQSFEVEGCCMV 173
Query: 419 IEAW-GKLNKIDEAEAAFEMLSGKTELSS----KNCSAMLRVYANHKMLMKGKDLVKRMA 473
+ + L K+D E A ++ S K + ++R K +L+ M+
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKR 533
GC +T++ +++ + ++ E+ KA + + S P +Y +++ Y K
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS---VCSPDVVTYTSMISGYCKA 290
Query: 534 GDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK--LPAYGIRDRLKGDNIYPNRNLA 591
G + + + M + G + VL+ Y KA L A IR ++ +P ++
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP--DVV 348
Query: 592 TLLAQVDGF 600
T + +DG+
Sbjct: 349 TFTSLIDGY 357
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 32/324 (9%)
Query: 217 LIAKIHGLQKAEAYVET--IPESLRGE---VIYRTLLANCVQKNNVKKAEEIFNKMKDLD 271
LI + G+ KAE +E + E V Y TL+ + N + KA E+F +K
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK--- 268
Query: 272 FPLTAFACNQLLLLY--------KKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLS 323
+ C+ ++ Y K R+ + +L M + P+ +T+N+L+D +
Sbjct: 269 ---SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 324 KDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVC 383
++ ++I KM G DV T L+ Y G + L +EM + N +
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 384 RTLLPLYAN---LGKADD-VGRIW-KVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEML 438
L+ N L KA + +G++ K + P++ I+ + K K++EA E +
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYN--PVIDGFCKAGKVNEANVIVEEM 443
Query: 439 SGKTELSSKNCSAMLRVYANHKM---LMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAG 495
K K +L + H M + + + +M GC +T +++ ++AG
Sbjct: 444 EKKKCKPDKITFTILII--GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Query: 496 EVEKADSILQKATQQSHANQVKPL 519
++A + Q A ++ +N V PL
Sbjct: 502 MAKEAYHLNQIA-RKGQSNNVVPL 524
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 15/249 (6%)
Query: 359 GLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAA 418
GL D A + + M+ + + N + L+ +A GK + + + VE C
Sbjct: 117 GLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL---LQSFEVEGCCMV 173
Query: 419 IEAW-GKLNKIDEAEAAFEMLSGKTELSS----KNCSAMLRVYANHKMLMKGKDLVKRMA 473
+ + L K+D E A ++ S K + ++R K +L+ M+
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKR 533
GC +T++ +++ + ++ E+ KA + + S P +Y +++ Y K
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS---VCSPDVVTYTSMISGYCKA 290
Query: 534 GDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK--LPAYGIRDRLKGDNIYPNRNLA 591
G + + + M + G + VL+ Y KA L A IR ++ +P ++
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP--DVV 348
Query: 592 TLLAQVDGF 600
T + +DG+
Sbjct: 349 TFTSLIDGY 357
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 116/280 (41%), Gaps = 19/280 (6%)
Query: 296 DVLLLMENENVKPSPLTYNILIDVK---GLSKDIAGMDQIVDKMKEEGLELDVKTKAVLV 352
D++ ME +P + YN +ID GL D ++ D+M+ +G+ D T LV
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV---ELFDRMERDGVRADAVTYNSLV 216
Query: 353 GHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW----KVCVT 408
G A L+++M ++ N ++ ++ GK + +++ + CV
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV- 275
Query: 409 NPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSS-KNCSAMLRVYANHKMLMKGKD 467
+P V + I ++DEA+ +++ K L + ++ + K + +G
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 468 LVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAIL 527
L + MA G +T++ I++ Y +AG + A I + +P +Y +L
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS-------RPNIRTYSILL 388
Query: 528 EQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
+ + +F M+++ I Y +++ K
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/483 (19%), Positives = 190/483 (39%), Gaps = 61/483 (12%)
Query: 125 ETGEPAEKKKAYRKRIESELCNKIMDAPGMAIHTALDKWV-EEGKEMSRQEISQAIFLLR 183
++G+ A Y++ LC I +P + +T L K + ++G+ I +A
Sbjct: 368 KSGDLATASVVYKRM----LCQGI--SPNVVTYTILIKGLCQDGR------IYEAF---- 411
Query: 184 KRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETI-----PESL 238
MYG+ L K+ +E Y+S +D K L+ A E + P +
Sbjct: 412 --GMYGQIL--------KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 239 RGEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY-KKNDKRKIADV 297
VIY L+ ++ + A KM L N L+ + + N + V
Sbjct: 462 ---VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 298 LLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYIS 357
LM +KP T+ ++ V + + + +M + GLE D L+ +
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEE 414
L M+ + + VC ++ L + +D + + + P +
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 415 CLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDL------ 468
I + L ++DEAE FE+L T + + ++ +L K D+
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLK-VTPFGPNTVTLTILIH----VLCKNNDMDGAIRM 693
Query: 469 VKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILE 528
MA+ G + +T+ ++ + ++ ++E + + ++ ++ + P SY I++
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG----ISPSIVSYSIIID 749
Query: 529 QYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK-------AKLPAYGIRDRLKG 581
KRG + + IF++ A + Y +L++ Y K A L + +R+ +K
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 582 DNI 584
D++
Sbjct: 810 DDL 812
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/281 (18%), Positives = 116/281 (41%), Gaps = 9/281 (3%)
Query: 312 TYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEM 371
++++ ID+ + ++ +M+ + KT A++ Y S G DKA L M
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 372 EGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL--AAIEAWGKLNKID 429
Q+ T+L + + + +++ V+ + W + +
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTP 212
Query: 430 EA-EAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIV 488
+A E EM+ + + ML+ + + + M C I +T+ +V
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Query: 489 KLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQ 548
+ AGE+++A ++ + ++ V P ++Y A+++ K+ ++ N+ +F M +
Sbjct: 273 HGFGVAGEIKRARNVFDEMIREG----VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 549 AGYTSRIRQYQVLLQAYIKAKLPAYG--IRDRLKGDNIYPN 587
GY + Y VL++ A + G + R++ + PN
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Query: 217 LIAKIHGLQKAEAYVETIPESLRGEVI-----YRTLLANCVQKNNVKKAEEIFNKMKDLD 271
LI + + K E ++ + R ++ Y ++ C + ++ +E F++M +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 272 FPLTAFACNQLLLLYKKNDKRKIA-DVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMD 330
N L+ Y ++ + +A ++ M+++ + P+ TY LI + +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 331 QIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLY 390
+ ++M+ EGLE +V L+ Y G K E LL+EM +N+ N+ ++ Y
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 391 ANLGKADDVGRI 402
A G + R+
Sbjct: 761 ARDGNVTEASRL 772
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Query: 217 LIAKIHGLQKAEAYVETIPESLRGEVI-----YRTLLANCVQKNNVKKAEEIFNKMKDLD 271
LI + + K E ++ + R ++ Y ++ C + ++ +E F++M +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 272 FPLTAFACNQLLLLYKKNDKRKIA-DVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMD 330
N L+ Y ++ + +A ++ M+++ + P+ TY LI + +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 331 QIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLY 390
+ ++M+ EGLE +V L+ Y G K E LL+EM +N+ N+ ++ Y
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 391 ANLGKADDVGRI 402
A G + R+
Sbjct: 761 ARDGNVTEASRL 772
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 8/262 (3%)
Query: 307 KPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEA 366
+PS +T+ L+ L I +V M + G E +V L+ G + A
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 367 LLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEECLAAIEAWG 423
LL EME + L + TLL G+ D R+ + + NP V A I+ +
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 424 KLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPL 482
K +DEA+ + EM+ + ++ ++++ H L K MA GC +
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
Query: 483 TWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKI 542
T++ ++ + + V++ + Q+ + + + +Y ++ Y + G + + I
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI----FTYNTLIHGYCQVGKLRVALDI 373
Query: 543 FYRMKQAGYTSRIRQYQVLLQA 564
F M T I + +LL
Sbjct: 374 FCWMVSRRVTPDIITHCILLHG 395
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 137/328 (41%), Gaps = 40/328 (12%)
Query: 277 FACNQLLLLYKKNDK----RKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQI 332
F N+++L+ +++ ++ +L M NV + T NILI G ++D+ ++
Sbjct: 134 FLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL 193
Query: 333 VDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYAN 392
V K+ L+++ T L+ Y+ KA + E+ K + + LL A
Sbjct: 194 V---KKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 393 LGKADDVGRIWKV--CVTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNC 449
KA V K C + Y + I G++ K DEA F EM++ L+
Sbjct: 251 DEKACQVFEDMKKRHCRRDEYTYTIM--IRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 450 SAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKA-- 507
+ +++V A KM+ K + RM ++GCR T+ ++ L V G++ + D +++ +
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR 368
Query: 508 --------------TQQSHANQVKPLFS------------SYIAILEQYSKRGDIHNSEK 541
++ H ++ LF SY+++LE G + +
Sbjct: 369 YMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIE 428
Query: 542 IFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
+ ++ + G + Y + A K K
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLK 456
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 114/277 (41%), Gaps = 42/277 (15%)
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
ME + ++ + + YN L+D S I ++ + +M+++GL+ T +L+ Y
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 361 EDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIE 420
D E LL+EME D+G P V+ I
Sbjct: 430 PDIVETLLREME-------------------------DLG-------LEPNVKSYTCLIS 457
Query: 421 AWGKLNKIDE--AEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCR 478
A+G+ K+ + A+A M + SS + +A++ Y+ K + M G +
Sbjct: 458 AYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIK 517
Query: 479 IGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHN 538
T+ +++ + +G+ K I + ++ ++K +Y +L+ ++K+G
Sbjct: 518 PSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE----KIKGTRITYNTLLDGFAKQGLYIE 573
Query: 539 SEKIFYRMKQAGYTSRIRQYQVLLQAYIK----AKLP 571
+ + + G + Y +L+ AY + AKLP
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLP 610
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 10/276 (3%)
Query: 301 MENENVKPSPLTYNILID-VKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFG 359
M+ NV P +T ILI ++ + + +I +KM E+G++ LV + G
Sbjct: 299 MDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEG 358
Query: 360 LEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTN---PYVEECL 416
L+++A + EME + ++ N V TL+ Y ++V ++ P
Sbjct: 359 LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 417 AAIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYA-NHKMLMKGKDLVKRMAD 474
++A+ + + D E EM E + K+ + ++ Y KM D RM
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 475 SGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
G + ++ A++ Y +G EKA + ++ ++ +KP +Y ++L+ + + G
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG----IKPSVETYTSVLDAFRRSG 534
Query: 535 DIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKL 570
D +I+ M + Y LL + K L
Sbjct: 535 DTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 134/314 (42%), Gaps = 56/314 (17%)
Query: 172 RQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYV 231
R + QA +L++ N YG AL WL K+Q F + D + ++ + ++ A
Sbjct: 328 RIDAYQANQVLKQMNDYGNALGFFYWL--KRQPGF-KHDGHTYTTMVGNLGRAKQFGAIN 384
Query: 232 ETIPESLR-----GEVIYRTLLANCVQKNNVKKAEEIFNKMKD-------------LDFP 273
+ + E +R V Y L+ + + N + +A +FN+M++ +D
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 274 LTAFACNQLLLLYKKNDKRKIAD-----------------------VLLLMENENVKPSP 310
A + + +Y++ ++ + M ++ P+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 311 LTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKE 370
+TYNI++D+ +++ ++ M+ G E D T ++++ G ++AEA+ E
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 371 MEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV------CVTNPYVEECLAAIEAWGK 424
M+ +N + V L+ L+ GKA +V + W+ P V C + + + +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLW---GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 425 LNKIDEAEAAFEML 438
+NKI E A+E+L
Sbjct: 622 VNKIAE---AYELL 632
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/335 (18%), Positives = 138/335 (41%), Gaps = 13/335 (3%)
Query: 267 MKDLDFPLTAFACNQLLLLYKKND-KRKIADVLLLMENENVKPSPLTYNILIDVKGLSKD 325
+++L + A+ NQ+L + ND + L K TY ++ G +K
Sbjct: 322 LQNLGLRIDAYQANQVL--KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
+++++D+M +G + + T L+ Y ++A + +M+ K +R T
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 386 LLPLYANLGKAD---DVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGK 441
L+ ++A G D D+ + + +P I GK + A F EM+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 442 TELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKAD 501
+ + M+ ++A + L + M ++G +T+ ++++ G +E+A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 502 SILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVL 561
++ + Q++ P Y +++ + K G++ + + + M AG + L
Sbjct: 560 AVFTEMQQKNWI----PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Query: 562 LQAYIKAK--LPAYGIRDRLKGDNIYPNRNLATLL 594
L +++ AY + + + P+ TLL
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 134/314 (42%), Gaps = 56/314 (17%)
Query: 172 RQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYV 231
R + QA +L++ N YG AL WL K+Q F + D + ++ + ++ A
Sbjct: 328 RIDAYQANQVLKQMNDYGNALGFFYWL--KRQPGF-KHDGHTYTTMVGNLGRAKQFGAIN 384
Query: 232 ETIPESLR-----GEVIYRTLLANCVQKNNVKKAEEIFNKMKD-------------LDFP 273
+ + E +R V Y L+ + + N + +A +FN+M++ +D
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 274 LTAFACNQLLLLYKKNDKRKIAD-----------------------VLLLMENENVKPSP 310
A + + +Y++ ++ + M ++ P+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 311 LTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKE 370
+TYNI++D+ +++ ++ M+ G E D T ++++ G ++AEA+ E
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 371 MEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV------CVTNPYVEECLAAIEAWGK 424
M+ +N + V L+ L+ GKA +V + W+ P V C + + + +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLW---GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 425 LNKIDEAEAAFEML 438
+NKI E A+E+L
Sbjct: 622 VNKIAE---AYELL 632
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/335 (18%), Positives = 138/335 (41%), Gaps = 13/335 (3%)
Query: 267 MKDLDFPLTAFACNQLLLLYKKND-KRKIADVLLLMENENVKPSPLTYNILIDVKGLSKD 325
+++L + A+ NQ+L + ND + L K TY ++ G +K
Sbjct: 322 LQNLGLRIDAYQANQVL--KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
+++++D+M +G + + T L+ Y ++A + +M+ K +R T
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 386 LLPLYANLGKAD---DVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGK 441
L+ ++A G D D+ + + +P I GK + A F EM+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 442 TELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKAD 501
+ + M+ ++A + L + M ++G +T+ ++++ G +E+A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 502 SILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVL 561
++ + Q++ P Y +++ + K G++ + + + M AG + L
Sbjct: 560 AVFTEMQQKNWI----PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Query: 562 LQAYIKAK--LPAYGIRDRLKGDNIYPNRNLATLL 594
L +++ AY + + + P+ TLL
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 40/299 (13%)
Query: 242 VIYRTLLANCVQ-KNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLL 300
V Y TLLA C++ KN KA E+ ++ + + +L + N + + A+ +
Sbjct: 202 VTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 301 -MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFG 359
M+ E P+ Y+ L++ D D+++ +MK GL + L+ YI G
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGG 321
Query: 360 LEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAI 419
L D++ LL E+E +N PY C+ +
Sbjct: 322 LFDRSRELLSELESAGYAENEM----------------------------PY---CM-LM 349
Query: 420 EAWGKLNKIDEAEAAFEMLSGKTELSSKNC-SAMLRVYANHKMLMKGKDLVKRMADSGCR 478
+ K K++EA + F+ + GK S S M+ K + K+L + + +
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 479 IGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIH 537
+ + ++ Y AGE+E +++K +Q+ V P ++++ IL +Y + +H
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA----VSPDYNTF-HILIKYFIKEKLH 463
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 434 AFEMLSGKTELSS-KNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYV 492
+FE + K L S +NC+ +L+V + +M+ K + + M + G +T++ ++
Sbjct: 190 SFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 493 EAGEVEKADSI-LQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGY 551
+AG++E+ D I L+ + ++V +Y ++ +SK G + + + M+++G+
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEV-----TYNILINGFSKNGKMEEARRFHGDMRRSGF 304
Query: 552 TSRIRQYQVLLQAYIKAKL--PAYGIRDRLKGDNIYPN 587
+ L++ Y K L A+G+ D + IYP
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPT 342
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 122/277 (44%), Gaps = 23/277 (8%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKM--KDLDFPLTAFACNQLLLLYKKNDKRKIADVLL 299
+ + TL+ + V +A + NKM K L + + + + K D + ++L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG-TIVNGMCKMGDTKSALNLLS 285
Query: 300 LMENENVKPSPLTYNILIDVKGLSKDIAGMDQ--IVDKMKEEGLELDVKTKAVLVGHYIS 357
ME ++KP + Y+ +ID L KD D + +M E+G+ +V T ++ + S
Sbjct: 286 KMEETHIKPDVVIYSAIID--RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL- 416
FG A+ LL++M + + L+ GK + K+C + + C+
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE---KLC--DEMLHRCIF 398
Query: 417 -------AAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLV 469
+ I + K N+ D+A+ F++++ ++ + ++ VY K + +G L+
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTF---NTIIDVYCRAKRVDEGMQLL 455
Query: 470 KRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQK 506
+ ++ G T++ ++ + E + A + Q+
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 134/314 (42%), Gaps = 56/314 (17%)
Query: 172 RQEISQAIFLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYV 231
R + QA +L++ N YG AL WL K+Q F + D + ++ + ++ A
Sbjct: 328 RIDAYQANQVLKQMNDYGNALGFFYWL--KRQPGF-KHDGHTYTTMVGNLGRAKQFGAIN 384
Query: 232 ETIPESLR-----GEVIYRTLLANCVQKNNVKKAEEIFNKMKD-------------LDFP 273
+ + E +R V Y L+ + + N + +A +FN+M++ +D
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 274 LTAFACNQLLLLYKKNDKRKIAD-----------------------VLLLMENENVKPSP 310
A + + +Y++ ++ + M ++ P+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 311 LTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKE 370
+TYNI++D+ +++ ++ M+ G E D T ++++ G ++AEA+ E
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 371 MEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV------CVTNPYVEECLAAIEAWGK 424
M+ +N + V L+ L+ GKA +V + W+ P V C + + + +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLW---GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 425 LNKIDEAEAAFEML 438
+NKI E A+E+L
Sbjct: 622 VNKIAE---AYELL 632
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/335 (18%), Positives = 138/335 (41%), Gaps = 13/335 (3%)
Query: 267 MKDLDFPLTAFACNQLLLLYKKND-KRKIADVLLLMENENVKPSPLTYNILIDVKGLSKD 325
+++L + A+ NQ+L + ND + L K TY ++ G +K
Sbjct: 322 LQNLGLRIDAYQANQVL--KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
+++++D+M +G + + T L+ Y ++A + +M+ K +R T
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 386 LLPLYANLGKAD---DVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGK 441
L+ ++A G D D+ + + +P I GK + A F EM+
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 442 TELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKAD 501
+ + M+ ++A + L + M ++G +T+ ++++ G +E+A+
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 502 SILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVL 561
++ + Q++ P Y +++ + K G++ + + + M AG + L
Sbjct: 560 AVFTEMQQKNWI----PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSL 615
Query: 562 LQAYIKAK--LPAYGIRDRLKGDNIYPNRNLATLL 594
L +++ AY + + + P+ TLL
Sbjct: 616 LSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLL 650
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 152/379 (40%), Gaps = 46/379 (12%)
Query: 191 ALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETI-PESLRGEVIYRTLLA 249
AL + +W E++K + +Y + ++ + KI + + V+ + + L + + +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISR 170
Query: 250 NCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIAD---VLLLMENENV 306
+ VK+A F+KM++ F + + N++L K+ R + D V M+ +
Sbjct: 171 RYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS--RNVGDAQKVFDKMKKKRF 228
Query: 307 KPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEA 366
+P +Y IL++ G ++ +D++ +MK+EG E DV +++ + ++A
Sbjct: 229 EPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIR 288
Query: 367 LLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLN 426
EME N C +P++ + I G
Sbjct: 289 FFNEMEQRN------------------------------CKPSPHI--FCSLINGLGSEK 316
Query: 427 KIDEAEAAFEML-SGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWD 485
K+++A FE S L + +A++ Y + + V M G T+D
Sbjct: 317 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 486 AIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYR 545
I+ + ++A + Q + +P S+Y ++ + + + + KI+
Sbjct: 377 IILHHLIRMQRSKEAYEVYQTMS-------CEPTVSTYEIMVRMFCNKERLDMAIKIWDE 429
Query: 546 MKQAGYTSRIRQYQVLLQA 564
MK G + + L+ A
Sbjct: 430 MKGKGVLPGMHMFSSLITA 448
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 164/397 (41%), Gaps = 22/397 (5%)
Query: 180 FLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLR 239
L R R+ + AL + +W ES K + Y VD++ K + + +V E +R
Sbjct: 93 LLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV----ERMR 148
Query: 240 GE-VIYRTLLANCVQK----NNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKI 294
G+ ++ +A +++ ++A IF+++ + + N LL K + +
Sbjct: 149 GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQ 208
Query: 295 ADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGH 354
A V+LL ++ P+ T+NI I + + + +MK G V + ++
Sbjct: 209 ARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRC 268
Query: 355 YISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV-----CVTN 409
Y K +L EME N T++ + ++ R+ C +
Sbjct: 269 YCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPD 328
Query: 410 PYVEECLAAIEAWGKLNKIDEAEAAF--EMLSGKTELSSKNCSAMLRVYANHKMLMKGKD 467
CL I + +++EAE F EM +++ ++M+ +Y +H K +
Sbjct: 329 SLFYNCL--IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 468 LVKRMADSG-CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAI 526
L+K M S C T+ +++ + G+V + +L++ + H + + S+Y +
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE---STYTFL 443
Query: 527 LEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQ 563
+++ + + +F M T R R +LL+
Sbjct: 444 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 164/397 (41%), Gaps = 22/397 (5%)
Query: 180 FLLRKRNMYGRALQLSEWLESKKQIEFIERDYASRVDLIAKIHGLQKAEAYVETIPESLR 239
L R R+ + AL + +W ES K + Y VD++ K + + +V E +R
Sbjct: 93 LLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV----ERMR 148
Query: 240 GE-VIYRTLLANCVQK----NNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKI 294
G+ ++ +A +++ ++A IF+++ + + N LL K + +
Sbjct: 149 GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQ 208
Query: 295 ADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGH 354
A V+LL ++ P+ T+NI I + + + +MK G V + ++
Sbjct: 209 ARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRC 268
Query: 355 YISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV-----CVTN 409
Y K +L EME N T++ + ++ R+ C +
Sbjct: 269 YCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPD 328
Query: 410 PYVEECLAAIEAWGKLNKIDEAEAAF--EMLSGKTELSSKNCSAMLRVYANHKMLMKGKD 467
CL I + +++EAE F EM +++ ++M+ +Y +H K +
Sbjct: 329 SLFYNCL--IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 468 LVKRMADSG-CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAI 526
L+K M S C T+ +++ + G+V + +L++ + H + + S+Y +
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE---STYTFL 443
Query: 527 LEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQ 563
+++ + + +F M T R R +LL+
Sbjct: 444 IQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 114/272 (41%), Gaps = 19/272 (6%)
Query: 306 VKPSPLTYNILIDVKGLSKDIAGMDQ---IVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
V P +TYN LI KG ++ I G+D+ + +M+E G+E DV T L+ + +
Sbjct: 44 VLPDVITYNTLI--KGYTRFI-GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN 100
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW----KVCVTNPYVEECLAA 418
+ L EM L + W TL+ Y LG+ + +I + P ++
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 419 IEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCR 478
++A K D A F+ L + + + ++ + + +++ + SG
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT 220
Query: 479 IGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSY--IAILEQYSKRGDI 536
+T+ ++K+Y + +EK + K ++ + F + A++ K G
Sbjct: 221 PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT------FDGFANCAVVSALIKTGRA 274
Query: 537 HNSEKIFYRMKQAGYTSR-IRQYQVLLQAYIK 567
+ + + + ++G S+ I Y LL Y K
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 127/325 (39%), Gaps = 37/325 (11%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLM 301
+ Y L+ ++ ++ A ++ M+ N+L+ Y K++ K VL M
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM 453
Query: 302 ENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLE 361
V P +TYN LID + S + +++ M + GL D T ++
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 362 DKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECLAAIEA 421
++A L +E + + NP V A I+
Sbjct: 514 EEACDLFDSLEQKGV--------------------------------NPNVVMYTALIDG 541
Query: 422 WGKLNKIDEAEAAFE-MLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIG 480
+ K K+DEA E MLS +S +A++ L + L ++M G +
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 481 PLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSE 540
T ++ ++ G+ + A S QQ ++ KP +Y ++ Y + G + ++E
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRF----QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 541 KIFYRMKQAGYTSRIRQYQVLLQAY 565
+ +M++ G + + Y L++ Y
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGY 682
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 122/277 (44%), Gaps = 23/277 (8%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKM--KDLDFPLTAFACNQLLLLYKKNDKRKIADVLL 299
+ + TL+ + V +A + NKM K L + + + + K D + ++L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG-TIVNGMCKMGDTKSALNLLS 285
Query: 300 LMENENVKPSPLTYNILIDVKGLSKDIAGMDQ--IVDKMKEEGLELDVKTKAVLVGHYIS 357
ME ++KP + Y+ +ID L KD D + +M E+G+ +V T ++ + S
Sbjct: 286 KMEETHIKPDVVIYSAIID--RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 358 FGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL- 416
FG A+ LL++M + + L+ GK + K+C + + C+
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK---LFEAEKLC--DEMLHRCIF 398
Query: 417 -------AAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLV 469
+ I + K N+ D+A+ F++++ ++ + ++ VY K + +G L+
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTF---NTIIDVYCRAKRVDEGMQLL 455
Query: 470 KRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQK 506
+ ++ G T++ ++ + E + A + Q+
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 127/309 (41%), Gaps = 19/309 (6%)
Query: 246 TLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKK-NDKRKIADVLLLMENE 304
+L+ C + + +++ L F LL LY K D D L E E
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 305 NVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKA 364
NV + +N+++ GL D+ +I +M+ E + + T ++ I G +
Sbjct: 454 NV----VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 365 EALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV--TNPYVEECLAAIEAW 422
E + ++ N + N +VC L+ +YA LGK D W + + V I +
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA---WDILIRFAGKDVVSWTTMIAGY 566
Query: 423 GKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGP 481
+ N D+A F +ML + + A + L +G+ + + SG
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 482 LTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEK 541
+A+V LY G++E++ A +Q+ A ++ A++ + + G+ + +
Sbjct: 627 PFQNALVTLYSRCGKIEES----YLAFEQTEAGDNI----AWNALVSGFQQSGNNEEALR 678
Query: 542 IFYRMKQAG 550
+F RM + G
Sbjct: 679 VFVRMNREG 687
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 151/381 (39%), Gaps = 41/381 (10%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLLM 301
+Y L+ + + +AE +F++M + + L+ ++ + K A L M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 302 ENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLE 361
+ +K S YN LI+ DI+ + + +M + LE V T L+G Y S G
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 362 DKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRI------WKVCVTNPYVEEC 415
+KA L EM G+ + + + TLL G D ++ W V P
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV---KPNRVTY 545
Query: 416 LAAIEAW---GKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKG-----KD 467
IE + G ++K AFE L TE + R H + + G K
Sbjct: 546 NVMIEGYCEEGDMSK------AFEFLKEMTEKGIVPDTYSYRPLI-HGLCLTGQASEAKV 598
Query: 468 LVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAIL 527
V + C + + + ++ + G++E+A S+ Q+ Q+ V Y ++
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG----VDLDLVCYGVLI 654
Query: 528 EQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLP------AYGIRDRLKG 581
+ K H K+F+ + + + ++ V+ + I AK A+GI D +
Sbjct: 655 DGSLK----HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 582 DNIYPNRNLATLLAQVDGFRK 602
+ PN T A ++G K
Sbjct: 711 EGCVPNE--VTYTAVINGLCK 729
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 145/395 (36%), Gaps = 73/395 (18%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDK-RKIADVLLLME 302
Y L+ C N ++A E+ KM D N +L YK + K LM+
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 275
Query: 303 NENVKPSPLTYNILI----------------------------DVKGLSK---------D 325
V+P T+NI+I DV + +
Sbjct: 276 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 335
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
I + + M EGL+ ++ + L+G Y G+ A ++L +++ + +
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395
Query: 386 LLPLYA---NLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGK 441
LL Y GKA +V + + P V A I+A+G + EA F +M
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 442 TELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKAD 501
+ + + +L + K + ++ G + +++ + Y+ A E+EKA
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 502 SILQKATQQS-HANQVK-----------------------------PLFSS-YIAILEQY 530
++ Q ++ A+ V PL Y ++L Y
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 531 SKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
SK+G + +E IF +MK AG + Y +L AY
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 142/336 (42%), Gaps = 15/336 (4%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLLM 301
IY ++ + N V +A +F +M+ A + L+ + + + + A +++ M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 302 ENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLE 361
+ PS TYN LI+ G S + ++ KM + G+ D+ T +++ Y S
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 362 DKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW-----KVCVTNPYVEECL 416
KA + + M+G ++ + ++ + LG++ ++ K P V
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 417 AAIEAWGKLNKIDEAEAAFEMLSG---KTELSSKNCSAMLRVYANHKMLMKGKDLVKRMA 473
+ + + +I+ A FE + K + S N A++ YA H M ++ +
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN--ALMGAYAVHGMSGTALSVLGDIK 382
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKR 533
+G +++ ++ Y + + KA + ++ KP +Y A+++ Y
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR----KPNVVTYNALIDAYGSN 438
Query: 534 GDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
G + + +IF +M+Q G + LL A ++K
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 474
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 11/300 (3%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDK-RKIADVLLL 300
++Y ++L + + + + MK T A +++++ Y + + R VL L
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
M+ V+P+ L N IDV + + + +++M+ G+ +V T ++ Y
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 361 EDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW-KVCVTNPYVEECLAAI 419
++A LL++M + ++ T++ + +V + K+ + V + +
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 420 EAWGKLNKIDEAEAAFEMLSGKTE----LSSKNCSAMLRVYANHKMLMKGKDLVKRMADS 475
L K D A+ A L E + SA++ + + KDL+ M
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 476 G-CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRG 534
G C +T+ A+V + GEV+KA +LQ H KP SY A+L + G
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH----KPNTVSYTALLNGMCRTG 503
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 8/266 (3%)
Query: 307 KPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEA 366
KP + YN +ID +K + +++ +G+ +V T LV + A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 367 LLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCV---TNPYVEECLAAIEAWG 423
LL +M + + N LL + GK + +++ V +P + + I
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 424 KLNKIDEAEAAFEMLSGKTELSS-KNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPL 482
++IDEA F+++ K L+ + + ++ + K + G L + M+ G +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 483 TWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKI 542
T++ +++ + +AG+V+KA Q+ Q + P +Y +L G++ + I
Sbjct: 367 TYNTLIQGFFQAGDVDKA----QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 543 FYRMKQAGYTSRIRQYQVLLQAYIKA 568
F M++ I Y +++ K
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKT 448
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 100/236 (42%), Gaps = 8/236 (3%)
Query: 331 QIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLY 390
+VDKM E G + D+ ++ + A KE+E + ++ N L+
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 391 ANLGKADDVGRIWKVCV---TNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSS 446
N + D R+ + P V A ++A+ K K+ EA+ F EM+ +
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 447 KNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQK 506
S+++ H + + + M GC ++++ ++ + +A VE + ++
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 507 ATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLL 562
+Q+ + +Y +++ + + GD+ +++ F +M G + I Y +LL
Sbjct: 356 MSQRGLVSNT----VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 145/395 (36%), Gaps = 73/395 (18%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDK-RKIADVLLLME 302
Y L+ C N ++A E+ KM D N +L YK + K LM+
Sbjct: 84 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 143
Query: 303 NENVKPSPLTYNILI----------------------------DVKGLSK---------D 325
V+P T+NI+I DV + +
Sbjct: 144 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 203
Query: 326 IAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRT 385
I + + M EGL+ ++ + L+G Y G+ A ++L +++ + +
Sbjct: 204 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 263
Query: 386 LLPLYA---NLGKADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGK 441
LL Y GKA +V + + P V A I+A+G + EA F +M
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 442 TELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKAD 501
+ + + +L + K + ++ G + +++ + Y+ A E+EKA
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 502 SILQKATQQS-HANQVK-----------------------------PLFSS-YIAILEQY 530
++ Q ++ A+ V PL Y ++L Y
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 531 SKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAY 565
SK+G + +E IF +MK AG + Y +L AY
Sbjct: 444 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 142/336 (42%), Gaps = 15/336 (4%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLLM 301
IY ++ + N V +A +F +M+ A + L+ + + + + A +++ M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 302 ENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLE 361
+ PS TYN LI+ G S + ++ KM + G+ D+ T +++ Y S
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 362 DKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIW-----KVCVTNPYVEECL 416
KA + + M+G ++ + ++ + LG++ ++ K P V
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 417 AAIEAWGKLNKIDEAEAAFEMLSG---KTELSSKNCSAMLRVYANHKMLMKGKDLVKRMA 473
+ + + +I+ A FE + K + S N A++ YA H M ++ +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN--ALMGAYAVHGMSGTALSVLGDIK 250
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKR 533
+G +++ ++ Y + + KA + ++ KP +Y A+++ Y
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR----KPNVVTYNALIDAYGSN 306
Query: 534 GDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
G + + +IF +M+Q G + LL A ++K
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 342
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 139/345 (40%), Gaps = 69/345 (20%)
Query: 242 VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLY--------KKNDKRK 293
V + TL+ Q N +A + +M C L+ Y K+ +
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERM-------VVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 294 IADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVD---KMKEEGLELDVKTKAV 350
++L ME ++ + YN +ID GL K MD D KM+ +G++ DV T
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIID--GLCK-YKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 351 LVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNP 410
L+ ++G A LL +M +N+ NP
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNI--------------------------------NP 318
Query: 411 YVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNC-------SAMLRVYANHKMLM 463
+ A I+A+ K K+ EAE ++ + + SK+C + +++ + +K +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEM-----VKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 464 KGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSY 523
+G ++ + M+ G +T+ ++ + +A + + A Q +Q ++ V P +Y
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA----QMVFKQMVSDGVHPDIMTY 429
Query: 524 IAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
+L+ G++ + +F M++ I Y +++A KA
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 243 IYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLL-LLYKKNDKRKIA------ 295
+YR+LL + NVK+A + MK F N LL L ++N R +
Sbjct: 210 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 269
Query: 296 -DVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGH 354
+++L M + ++P+ ++YNIL+ G ++ + QI+++MK G + D + +V
Sbjct: 270 LNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRV 329
Query: 355 YISFGLEDKAEALLKEMEGENLKQNR 380
G K ++ EM + R
Sbjct: 330 LYLTGRFGKGNQIVDEMIERGFRPER 355
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 176/413 (42%), Gaps = 56/413 (13%)
Query: 188 YGRALQLSEWLESKKQIEF--IERD---YASRVDLIAKIHGLQKAEAYVETIPESLRGE- 241
+ +A ++ E + K+++F +E D Y S + L + +A + + E RG+
Sbjct: 222 FCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE--RGDS 279
Query: 242 ---VIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIADVL 298
+ Y TL+ + +K+A EIF M + + L+ K K A L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 299 L-LMENENVKPSPLTYNILIDVKGLSKD--IAGMDQIVDKMKEEGLELDVKTKAVLVGHY 355
L LM ++ +P+ +TYNI+I+ L KD +A +IV+ MK+ D T +L+G
Sbjct: 340 LNLMIEKDEEPNAVTYNIIIN--KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 356 ISFGLEDKAEALLKEMEGEN-----------------LKQNRWVCRTLLPLY----ANLG 394
+ G D+A LL M ++ K+NR L +Y LG
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL--HQALDIYDLLVEKLG 455
Query: 395 KADDVGRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLR 454
D V TN + L A G +NK E ++ K +S +AM+
Sbjct: 456 AGDRV-------TTNILLNSTLKA----GDVNK--AMELWKQISDSKIVRNSDTYTAMID 502
Query: 455 VYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHAN 514
+ ML K L+ +M S + ++ ++ + G +++A + ++ + ++
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF- 561
Query: 515 QVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
P S+ +++ K GDI ++E + M +AG + + Y L+ ++K
Sbjct: 562 ---PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 119/283 (42%), Gaps = 18/283 (6%)
Query: 296 DVLLLMENENVKPSPLTYNILID--VKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVG 353
DV + +KPS YN +ID VK S D+A + +M+ +G + D T +L+
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLK--FQQMRSDGCKPDRFTYNILIH 223
Query: 354 HYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGR---IWKVCVTNP 410
G+ D+A L+K+ME E + N + L+ + G+ D+ + + +V NP
Sbjct: 224 GVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNP 283
Query: 411 YVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTE----LSSKNCSAMLRVYANHKMLMKGK 466
E G + + AFE+L G E L A+L +N+ M +
Sbjct: 284 --NEATIRTFVHGIFRCLPPCK-AFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETG 340
Query: 467 DLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAI 526
++++ + G T++A + ++ ++ + I + VKP F+ Y+ +
Sbjct: 341 QFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG----VKPGFNGYLVL 396
Query: 527 LEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
++ ++ +M G S + Y ++ KA+
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKAR 439
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 297 VLLL--MENENVKPSPLTYNILIDVKGLSK--DIAGMDQIVDKMKEEGLELDVKTKAVLV 352
VLLL M++E PSP+ YN+LID GL K D+ + ++VD M +G + T L+
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLID--GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 353 GHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPY- 411
G DKA +LL+ M N TL+ +A D R+ Y
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 412 VEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKG------ 465
+ + + ++ G L K +AE A + +++ K C + VY+ +L+ G
Sbjct: 360 LNQHIYSVLISG-LFKEGKAEEAMSLWR---KMAEKGCKPNIVVYS---VLVDGLCREGK 412
Query: 466 ----KDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKA 500
K+++ RM SGC T+ +++K + + G E+A
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 41/291 (14%)
Query: 318 DVKGLSKDIAGMDQI---------VDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALL 368
DV + +AG QI +KM+EE +++DV T + + Y GL +A +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 369 KEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNP-------YVEECLAA--- 418
++M +K N ++L A++G I + P + +E +
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 419 IEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCR 478
I+ + K K+D A A F+ LS K E + M+ Y+ H K +L+ M + C+
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPK-ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 479 IGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVK------PLFSSYIAILEQYSK 532
P + + V A + +Q HA ++ PLF S +++ Y+K
Sbjct: 473 TRPNAFT------ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN-CLIDMYAK 525
Query: 533 RGDIHNSEKIFYRM---KQAGYTSRIRQYQVLLQAYIKAKLPAYGIRDRLK 580
G I ++ +F M + +TS + Y + Y + L GI D ++
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYG--MHGYGEEAL---GIFDEMR 571
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 155/397 (39%), Gaps = 25/397 (6%)
Query: 224 LQKAEAY--VETIPESLR--------GEVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFP 273
L +A A+ VE++ LR GE ++ LL N + + IF ++ D
Sbjct: 93 LSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVK 152
Query: 274 LTAFACNQLLLLYKKNDKRKIADVLLLMENEN--VKPSPLTYNILIDVKGLSKDIAGMDQ 331
+ + N LL + +N + + + E+ + P+ T N+L+ DI +
Sbjct: 153 RSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYK 212
Query: 332 IVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYA 391
++D++ GL ++ T ++G Y++ G + A+ +L+EM + L+ Y
Sbjct: 213 VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYC 272
Query: 392 NLGKADDVGRIWKVCVTN---PYVEECLAAIEAWGKLNKIDEAEAAF-EMLSGKTELSSK 447
LG+ + + N P I A K K EA F EML S
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 448 NCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKA 507
C ++ + + L ++M + C ++ + G V +A + +
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 508 TQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
+ S P +Y ++ ++G++ + +++ M + Y VL++ K
Sbjct: 393 EKGS-----IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
Query: 568 AKLPAYGIR--DRLKGDNIYPNRNLATLLAQVDGFRK 602
G+R + + +PN+ T L +G +K
Sbjct: 448 NGNVKEGVRVLEEMLEIGCFPNK--TTFLILFEGLQK 482
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/298 (17%), Positives = 117/298 (39%), Gaps = 37/298 (12%)
Query: 292 RKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVL 351
++ +VL M + P +TY ILI+ + +++D+M++ G DV T VL
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 352 VGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPY 411
V G D+A L +M + N +T+
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPN--------------------------VITHNI 314
Query: 412 VEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKR 471
+ + + W +D + +ML S + ++ +L + D++++
Sbjct: 315 ILRSMCSTGRW-----MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 472 MADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYS 531
M GC+ L+++ ++ + + ++++A L++ + P +Y +L
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG----CYPDIVTYNTMLTALC 425
Query: 532 KRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAKLPAYGIR--DRLKGDNIYPN 587
K G + ++ +I ++ G + + Y ++ KA I+ D ++ ++ P+
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 19/255 (7%)
Query: 306 VKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAE 365
+ PS TY+IL+ +D +G ++ D+M E +D+ L+ G D
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263
Query: 366 ALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKV--------CVTNPYVEECLA 417
+ +EM LK + + + Y + G DV +KV V N Y +
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAG---DVHSAYKVLDRMKRYDLVPNVYTFNHI- 319
Query: 418 AIEAWGKLNKIDEAEAAF-EMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSG 476
I+ K K+D+A EM+ + ++++ + +H + + L+ RM +
Sbjct: 320 -IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 477 CRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQ-YSKRGD 535
C T++ ++KL + G ++A I + +++ + P ++Y ++ K+G
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSER----KFYPTVATYTVMIHGLVRKKGK 434
Query: 536 IHNSEKIFYRMKQAG 550
+ + + F M G
Sbjct: 435 LEEACRYFEMMIDEG 449
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 38/174 (21%)
Query: 301 MENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGL 360
M+ + +KP +TYN LIDV ++I +++DKM+EE DV T ++G G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 361 EDKAEALLKEME------------------------GENLK-QNRWVCRTLLP------- 388
DKA +LKEM+ G+ K + V + L P
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 389 LYANLGKADDVGRIWKVCVTN------PYVEECLAAIEAWGKLNKIDEAEAAFE 436
+ L A+D+GR W++ V P + C+ I+ + + K+D A +E
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWE 410
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 113/288 (39%), Gaps = 36/288 (12%)
Query: 280 NQLLLLYKKNDKRKIADVLLLMENENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEE 339
N ++L K K ++ ME + TY ++I S + ++ +MKE
Sbjct: 283 NLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKER 342
Query: 340 GLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDV 399
L + LV G D + + EM+G + + + +L+ YA GK D
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTA 402
Query: 400 GRIWKVCVTNPYVEECLAAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANH 459
R+W + + +G I E+ A SGK E++
Sbjct: 403 LRLWDEMKKSGFRPN-------FGLYTMIIESHAK----SGKLEVA-------------- 437
Query: 460 KMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPL 519
+ K M +G P T+ +++++ +G+V+ A I T ++P
Sbjct: 438 ------MTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAG----LRPG 487
Query: 520 FSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIK 567
SSYI++L + + + + KI MK GY+ + VL+ YIK
Sbjct: 488 LSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIK 534
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 11/243 (4%)
Query: 257 VKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLLLMENENVKPSPLTYNI 315
V A ++F+ + + D L F N ++ Y N + A +++ M+ +KP +T+N
Sbjct: 168 VGNARKVFSDLGEQD--LVVF--NAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNA 223
Query: 316 LIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGEN 375
LI ++ + +I++ M +G + DV + ++ + +KA K+M
Sbjct: 224 LISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHG 283
Query: 376 LKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL---AAIEAWGKLNKIDEAE 432
L N TLLP L I V + A ++ +GK I EA
Sbjct: 284 LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAM 343
Query: 433 AAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYV 492
F KT ++ ++M+ YANH + K +L +M +G ++ LT+ AI+
Sbjct: 344 ILFRKTPKKTTVTF---NSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACS 400
Query: 493 EAG 495
AG
Sbjct: 401 HAG 403
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 132/335 (39%), Gaps = 48/335 (14%)
Query: 241 EVIYRTLLANCVQKNNVKKAEEIFNKMKDLDFPLTAFACNQLLLLYKKNDKRKIA-DVLL 299
V + L+ + + N K+A ++F M+ + + LL KN + +A +
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432
Query: 300 LMENENVKPSPLTYNILIDVKGLSKDIAGMDQ---IVDKMKEEGLELDVKTKAVLVGHYI 356
M+ V +TY +ID GL K+ +D+ ++++M ++G++ D+ T + L+ +
Sbjct: 433 RMKRNGVCVGRITYTGMID--GLCKN-GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 357 SFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLGKADDVGRIWKVCVTNPYVEECL 416
G A+ ++ + L N + TL+ +G + RI++ + + +
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 417 ---AAIEAWGKLNKIDEAEAAFEMLSGKTELSSKNCSAMLRVYANHKMLMKGKDLVKRMA 473
+ + K K+ EAE + ++ M
Sbjct: 550 TFNVLVTSLCKAGKVAEAE----------------------------------EFMRCMT 575
Query: 474 DSGCRIGPLTWDAIVKLYVEAGEVEKADSILQKATQQSHANQVKPLFSSYIAILEQYSKR 533
G +++D ++ Y +GE KA S+ + T+ H P F +Y ++L+ K
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH----HPTFFTYGSLLKGLCKG 631
Query: 534 GDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKA 568
G + +EK + Y LL A K+
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/330 (18%), Positives = 139/330 (42%), Gaps = 24/330 (7%)
Query: 280 NQLLLLYKKNDK-RKIADVLLLMENENVKPSPLTYNILIDVK----GLSKDIAGMDQIVD 334
N ++ +Y ++ K K +++ M P +++N LI+ + GL+ ++A +++D
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAV--ELLD 286
Query: 335 KMKEEGLELDVKTKAVLVGHYISFGLEDKAEALLKEMEGENLKQNRWVCRTLLPLYANLG 394
++ GL D T L+ D A + ++ME + + W ++ +Y G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 395 KADDVGRIWKVCVTNPYVEECL---AAIEAWGKLNKIDEAEAAFEMLS----GKTELSSK 447
A + R++ + + + + + A+ + ++ + ++ + GK E++
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY- 405
Query: 448 NCSAMLRVYANHKMLMKGKDLVKRMAD-SGCRIGPLTWDAIVKLYVEAGEVEKADSILQK 506
+ ++ +Y L L K M SG +T+ ++ +A +A +++ +
Sbjct: 406 --NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 507 ATQQSHANQVKPLFSSYIAILEQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYI 566
+KP +Y A++ Y+K G +E F M ++G Y V+L +
Sbjct: 464 MLDVG----IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 567 KAK--LPAYGIRDRLKGDNIYPNRNLATLL 594
+ A+G+ + D P+ L L+
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 146/402 (36%), Gaps = 82/402 (20%)
Query: 244 YRTLLANCVQKNNVKKAEEIFNKM-KDLDFPLTAFACNQLLLLYKKNDKRKIADVLLLME 302
Y +L ++ N +KA ++ M D P +L L K+N I + ME
Sbjct: 511 YSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
Query: 303 NENVKPSPLTYNILIDVKGLSKDIAGMDQIVDKMKEEGLELDVKTKAVLVGHYISFGLED 362
E +PL + ++ VKG D+A V G EL+ T ++G Y S G
Sbjct: 571 -ELCGMNPLEISSVL-VKGECFDLAARQLKV--AITNGYELENDTLLSILGSYSSSGRHS 626
Query: 363 KAEALLKEMEGENLKQNRWVCRTLLPLYANLGK---------ADDVGRIW---------- 403
+A LL+ ++ R + L+ L+ + AD W
Sbjct: 627 EAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYET 686
Query: 404 --KVCVTNPYVEE-------------------CLAAIEAWGKLNKIDEAEAAFEMLSGKT 442
CV N + E C + + + KL + A +T
Sbjct: 687 LLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVN--QAET 744
Query: 443 ELSSKNCSAM----LRVYANHKMLMKGKDLVKRMADSGCRIGPLTWDAIVKLYVEAGEVE 498
+ CS M + Y K+ K + +V + SG TW++++ Y + G E
Sbjct: 745 KGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYE 804
Query: 499 KADSILQKATQQSHANQVKPLF-------------------------------SSYIAIL 527
+A +I + + V+ + SS + +L
Sbjct: 805 RARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLML 864
Query: 528 EQYSKRGDIHNSEKIFYRMKQAGYTSRIRQYQVLLQAYIKAK 569
+ +++ G+I +KI+ MK AGY IR Y+++++ K K
Sbjct: 865 DAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906