Miyakogusa Predicted Gene

Lj1g3v4139590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4139590.1 Non Chatacterized Hit- tr|J3MHX7|J3MHX7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB07G1,42.38,1e-16,seg,NULL,CUFF.32121.1
         (473 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39950.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   153   2e-37
AT2G39950.1 | Symbols:  | unknown protein; Has 978 Blast hits to...   153   3e-37

>AT2G39950.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 15 growth stages; Has 941
           Blast hits to 229 proteins in 79 species: Archae - 0;
           Bacteria - 8; Metazoa - 89; Fungi - 54; Plants - 41;
           Viruses - 0; Other Eukaryotes - 749 (source: NCBI
           BLink). | chr2:16676758-16679961 REVERSE LENGTH=555
          Length = 555

 Score =  153 bits (387), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 214/445 (48%), Gaps = 70/445 (15%)

Query: 1   MKDLLKRKPSVAELSGISKSRLDCFATQLRAFLVXXXXXXXXXXXVCASTSANSTACYNV 60
           MKDL+K+KPS++EL+GI +SRL   A+ LR +L+           V +  S++S+     
Sbjct: 157 MKDLIKKKPSISELTGIEESRLGSVASHLRLYLMGSVVPNIKGCQVPSPDSSSSSGFSET 216

Query: 61  AFDNSQTSSKFPRSRQIGGQTTKGDTMLYQSILSPRSSSFKEIPQRNSSSHRIAAREKIK 120
           A  +S  SSK  R+R  G Q TK      Q  LSPR+SSFKE   RN+S  RI++R+K K
Sbjct: 217 ADSSSSASSKSLRARHCGTQQTK-----TQGSLSPRASSFKENTLRNASL-RISSRDKSK 270

Query: 121 RRGDSYQPAIDNLANDSAYMLNLSSASDLDKSAEVAKSLTFSSG---FLGSHGNLTVPSS 177
              + +    D   N S   +  +    +    EV ++    +G    +      + PS+
Sbjct: 271 GHSEGHFSIFD---NSSITSIPTNVEGFIQSEGEVEEATENYNGIRQIIAFEEAESTPST 327

Query: 178 LGSGGKFP-ALVSPLFSPYYCWCPPEISALPSISALPQSSHXXXXXXXXXXXXXXXXNTV 236
           +     FP  +  P+FSPYYCWCPP  S+L + SA  Q                    + 
Sbjct: 328 MTGPPPFPLKMGPPVFSPYYCWCPPTTSSLHAPSASYQFPPLSIELPSLPPLSSLLPASG 387

Query: 237 SARLLEPVQPLNLSTSMXXXXXXXXXXXXXXXXXVRMSLPTSQQIPTFTQLMCDPLVRMS 296
           S   L P  PL+LS                        LP    IP           +M 
Sbjct: 388 SDGFLIPSSPLDLSDI--------------------PPLPLVHHIPIPGSSSSSSQQQMM 427

Query: 297 LPTSQQIPTFTPLMCDPIVHVPVIDVCSSGQGYLVSAGGPA-MSTSIPPLHPKLVNPLIP 355
           +          P+MCDPIVH+PVID+ SSGQ YLVSAG    +ST IPPL      P+  
Sbjct: 428 I----------PIMCDPIVHIPVIDIFSSGQSYLVSAGPTGIISTGIPPL------PV-- 469

Query: 356 ESDAVV-KGARETLRMLLSGSSQGAVMDPLPAILTSPDDNRNVLVTGSRGLYTGTRDINV 414
           E+D++V KGARETLR+L+SG++         A  ++P ++      GSRGLY+ +RD++ 
Sbjct: 470 ENDSLVEKGARETLRLLISGAN---------ATTSTPLNHH-----GSRGLYSVSRDVSG 515

Query: 415 IANSIAAMGFV--SQISNGDNEGDS 437
           ++   A +G    S +  GD  G+S
Sbjct: 516 VS-LFAPIGLQQPSSVEGGDGGGES 539


>AT2G39950.1 | Symbols:  | unknown protein; Has 978 Blast hits to
           254 proteins in 81 species: Archae - 0; Bacteria - 8;
           Metazoa - 109; Fungi - 53; Plants - 41; Viruses - 0;
           Other Eukaryotes - 767 (source: NCBI BLink). |
           chr2:16676758-16680204 REVERSE LENGTH=636
          Length = 636

 Score =  153 bits (386), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 214/445 (48%), Gaps = 70/445 (15%)

Query: 1   MKDLLKRKPSVAELSGISKSRLDCFATQLRAFLVXXXXXXXXXXXVCASTSANSTACYNV 60
           MKDL+K+KPS++EL+GI +SRL   A+ LR +L+           V +  S++S+     
Sbjct: 238 MKDLIKKKPSISELTGIEESRLGSVASHLRLYLMGSVVPNIKGCQVPSPDSSSSSGFSET 297

Query: 61  AFDNSQTSSKFPRSRQIGGQTTKGDTMLYQSILSPRSSSFKEIPQRNSSSHRIAAREKIK 120
           A  +S  SSK  R+R  G Q TK      Q  LSPR+SSFKE   RN+S  RI++R+K K
Sbjct: 298 ADSSSSASSKSLRARHCGTQQTK-----TQGSLSPRASSFKENTLRNASL-RISSRDKSK 351

Query: 121 RRGDSYQPAIDNLANDSAYMLNLSSASDLDKSAEVAKSLTFSSG---FLGSHGNLTVPSS 177
              + +    D   N S   +  +    +    EV ++    +G    +      + PS+
Sbjct: 352 GHSEGHFSIFD---NSSITSIPTNVEGFIQSEGEVEEATENYNGIRQIIAFEEAESTPST 408

Query: 178 LGSGGKFP-ALVSPLFSPYYCWCPPEISALPSISALPQSSHXXXXXXXXXXXXXXXXNTV 236
           +     FP  +  P+FSPYYCWCPP  S+L + SA  Q                    + 
Sbjct: 409 MTGPPPFPLKMGPPVFSPYYCWCPPTTSSLHAPSASYQFPPLSIELPSLPPLSSLLPASG 468

Query: 237 SARLLEPVQPLNLSTSMXXXXXXXXXXXXXXXXXVRMSLPTSQQIPTFTQLMCDPLVRMS 296
           S   L P  PL+LS                        LP    IP           +M 
Sbjct: 469 SDGFLIPSSPLDLSDI--------------------PPLPLVHHIPIPGSSSSSSQQQMM 508

Query: 297 LPTSQQIPTFTPLMCDPIVHVPVIDVCSSGQGYLVSAGGPA-MSTSIPPLHPKLVNPLIP 355
           +          P+MCDPIVH+PVID+ SSGQ YLVSAG    +ST IPPL      P+  
Sbjct: 509 I----------PIMCDPIVHIPVIDIFSSGQSYLVSAGPTGIISTGIPPL------PV-- 550

Query: 356 ESDAVV-KGARETLRMLLSGSSQGAVMDPLPAILTSPDDNRNVLVTGSRGLYTGTRDINV 414
           E+D++V KGARETLR+L+SG++         A  ++P ++      GSRGLY+ +RD++ 
Sbjct: 551 ENDSLVEKGARETLRLLISGAN---------ATTSTPLNHH-----GSRGLYSVSRDVSG 596

Query: 415 IANSIAAMGFV--SQISNGDNEGDS 437
           ++   A +G    S +  GD  G+S
Sbjct: 597 VS-LFAPIGLQQPSSVEGGDGGGES 620