Miyakogusa Predicted Gene
- Lj1g3v4139550.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4139550.3 Non Chatacterized Hit- tr|I1JI57|I1JI57_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.95,0,SUBFAMILY NOT
NAMED,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL; no
description,NULL; Leucine-rich ,CUFF.32002.3
(603 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr... 762 0.0
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ... 293 2e-79
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436... 287 2e-77
AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein... 280 2e-75
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986... 277 2e-74
AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20334... 262 5e-70
AT4G24390.1 | Symbols: | RNI-like superfamily protein | chr4:12... 243 4e-64
AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:12... 243 4e-64
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 5e-08
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 54 3e-07
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 51 2e-06
>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
chr2:16672848-16675486 REVERSE LENGTH=592
Length = 592
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/569 (66%), Positives = 441/569 (77%), Gaps = 6/569 (1%)
Query: 27 DVVLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLES 86
D V++ VM YI D KDRD+ S VCRRW+++DS TR+HVT+ALCYT TP+RL RRFP+L S
Sbjct: 18 DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRS 77
Query: 87 LMLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRA 146
L LKGKPRAAMFNLIPE+WGG+VTPWV EIS LKS+HFRRMIV+D DL+ LA++RA
Sbjct: 78 LKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARA 137
Query: 147 HTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETL 206
L+ LKL+KCSGF+TDGL I + CR ++ L MEESS E DG WLHE+A +N+ LE L
Sbjct: 138 DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197
Query: 207 NFYLTDIANVNVKDLELIAKNCPNLVSVKITDCEILELVNFFRYATSLEEFSGGSYNEE- 265
NFY+T+ A ++ KDLE IA+NC +LVSVK+ D EILELV FF+ A +LEEF GGS NE+
Sbjct: 198 NFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDI 257
Query: 266 --PEKYSAVSLPAKLNRLGLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHCTLIQRC 323
PEKY + P KL RLGL+Y+G NEMPI+FP TEDHCTLIQ+C
Sbjct: 258 GMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKC 317
Query: 324 PNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIALSQGC 383
PNLEVLE+RNVIGDRGLEVLA I +VSQRGLIAL+QGC
Sbjct: 318 PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGC 377
Query: 384 LELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDREEKITDLPLDDGVRALLRGCDK 443
ELEYMAVYVSDITN SLE IG LKNLCDFRLVLLDREE+ITDLPLD+GVR+LL GC K
Sbjct: 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKK 437
Query: 444 LRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQKLEIRG 503
LRRFA YLR GGLTD+GL YIGQYSPNVRWMLLGYVGE+D GL+EFS+GCP+LQKLE+RG
Sbjct: 438 LRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRG 497
Query: 504 CFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRV-VVNQE 562
C FSE A+A A T+L SLRYLWVQGY AS +G+DL+ MARPYWNIELIPSRRV VNQ+
Sbjct: 498 C-CFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQ 556
Query: 563 EPIVQ-EHPAHILAYYSLAGPRTDFPDTV 590
I + EHPAHILAYYSLAG RTD P TV
Sbjct: 557 GEIREMEHPAHILAYYSLAGQRTDCPTTV 585
>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
chr4:1405108-1407057 REVERSE LENGTH=585
Length = 585
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 296/572 (51%), Gaps = 22/572 (3%)
Query: 29 VLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLESLM 88
VL+ ++ +I ++DR++VS VC+ W+E + TRK V + CY +P + RRFP + SL
Sbjct: 9 VLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRRFPEMRSLT 68
Query: 89 LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 148
LKGKP A +NL+P+ WGG+ PW++ ++ +SL+ + +RM+VTD LE +A S
Sbjct: 69 LKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEKIAAS-FKD 127
Query: 149 LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 208
+ L L C GFSTDG+ I + CRNLRVL + E V + GDWL +++ L +L+F
Sbjct: 128 FKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVSLDF 187
Query: 209 YLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFRYATSLEEFSGGSYNEE-- 265
D + V + DLE + PNL S+K+ L+ LV+ R A L E GS+ +
Sbjct: 188 SCLD-SEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQLK 246
Query: 266 PEKYS----AVSLPAKLNRL-GLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHCTLI 320
PE +S A S +L L GL + +P ++ D L+
Sbjct: 247 PEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYATVRMPDLVELL 306
Query: 321 QRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIALS 380
+RC L+ L ++I D+GLE +A + ++++GL+ +S
Sbjct: 307 RRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIP--LTEQGLVFVS 364
Query: 381 QGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD--REEKITDLPLDDGVRALL 438
+GC +LE + + TNA+L I NL FRL +++ + T+ PLD G +A+
Sbjct: 365 KGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIA 424
Query: 439 RGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQK 498
GC LRR ++ G L+D YIG+++ VR + + + G++D L GC SL+K
Sbjct: 425 EGCRDLRRLSVS---GLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKK 481
Query: 499 LEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRVV 558
LEIR C F + AL A +L+++R LW+ S LL+ P N+E+I
Sbjct: 482 LEIRDC-PFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEHPPE 540
Query: 559 VNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 590
E V+ I Y ++AGPR D P+ V
Sbjct: 541 SRPESSPVE----RIYIYRTVAGPRMDTPEFV 568
>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
chr1:4368879-4370780 REVERSE LENGTH=577
Length = 577
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/576 (32%), Positives = 287/576 (49%), Gaps = 19/576 (3%)
Query: 27 DVVLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLES 86
D V++ V ++ KDR+++S VC+ W++++ +RK V I CY PERL RRFP L+S
Sbjct: 6 DEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRFPCLKS 65
Query: 87 LMLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRA 146
L LKGKP A FNL+P +WGGFV PW++ +++ L+ L +RM+VTD L+ L+RS A
Sbjct: 66 LTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLLSRSFA 125
Query: 147 HTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETL 206
+ + L L C GF+TDGL I + CR+LR L ++E+ + ++ G WL+ + + L +L
Sbjct: 126 N-FKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTTLMSL 184
Query: 207 NFYLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFRYATSLEEFSGGSYNEE 265
NF NV LE + PNL S+K+ L+ L A L + GSY E
Sbjct: 185 NFACLK-GETNVAALERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSYENE 243
Query: 266 PEKYSAVSLPAKLNRL-------GLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDH-C 317
P+ S L + + G + +P +P +H
Sbjct: 244 PDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAAEIQGNHLI 303
Query: 318 TLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLI 377
LIQ C L+ L + IGD+GL V+A + V++ GL+
Sbjct: 304 KLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNAS-VTEVGLV 362
Query: 378 ALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD--REEKITDLPLDDGVR 435
A+S GC +L + + +TNA+L + N N FRL +L+ + + IT LD+G
Sbjct: 363 AISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFG 422
Query: 436 ALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPS 495
A+++ C LRR ++ G LTD YIG Y+ + + + + G+TD G+L GC
Sbjct: 423 AIVQACKGLRRLSV---SGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKK 479
Query: 496 LQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELI-PS 554
++KLEIR F AL R +++R LW+ + G LA P N+E+I +
Sbjct: 480 MRKLEIRDS-PFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINEN 538
Query: 555 RRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 590
+ Q E +E + Y ++ G R D P V
Sbjct: 539 ENNGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574
>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
chr3:23273479-23276181 REVERSE LENGTH=594
Length = 594
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 287/576 (49%), Gaps = 21/576 (3%)
Query: 29 VLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLESLM 88
VL+ V +I KDR++VS VC+ WYE++ R+ V I CY +P + RRFP + S+
Sbjct: 13 VLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRSVE 72
Query: 89 LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 148
LKGKP A FNL+P+ WGG+V PW++ +S + L+ + +RM+VTD LE +A+S
Sbjct: 73 LKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKS-FKN 131
Query: 149 LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 208
+ L L C GFSTDGL I + CRNL+ L + ES V + G WL + L +LN
Sbjct: 132 FKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNI 191
Query: 209 YLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFRYATSLEEFSGGSYNEE-- 265
+ V+ LE + CPNL S+K+ LE L + A LEE G Y E
Sbjct: 192 SCL-ASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVR 250
Query: 266 PEKYSAVSLP----AKLNRL-GLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHCTLI 320
P+ YS +S+ +L L G +P V+ + D L+
Sbjct: 251 PDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLL 310
Query: 321 QRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIALS 380
+CP L+ L + I D GLEVLA + ++++GL+++S
Sbjct: 311 CQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRV--FPSEPFVMEPNVALTEQGLVSVS 368
Query: 381 QGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE--EKITDLPLDDGVRALL 438
GC +LE + + +TNA+L I N N+ FRL +++ + + +T PLD G A++
Sbjct: 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIV 428
Query: 439 RGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQK 498
C + G LTD YIG Y+ + + + + G++D G+ GC SL+K
Sbjct: 429 EHC---KDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRK 485
Query: 499 LEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRVV 558
LEIR C F + AL A++L+++R LW+ S LL P N+E+I R
Sbjct: 486 LEIRDC-PFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544
Query: 559 VNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPLD 594
++ E E + Y ++AGPR D P V +D
Sbjct: 545 DSRPESCPVE---RVFIYRTVAGPRFDMPGFVWNMD 577
>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
chr3:9868342-9870464 FORWARD LENGTH=575
Length = 575
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/578 (31%), Positives = 287/578 (49%), Gaps = 25/578 (4%)
Query: 27 DVVLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLES 86
D V++ V ++ KDR+A+S VC+ WY+++ +R+ V I CY PERL RRFP L+S
Sbjct: 6 DEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRFPCLKS 65
Query: 87 LMLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRA 146
L LKGKP A FNL+P +WGGFV PW++ +++ L+ L +RM+VTD LE L+RS
Sbjct: 66 LTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLSRSFV 125
Query: 147 HTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETL 206
+ + L L C GF+TDGL I + CR+LR L ++E+ + ++ G WL + L TL
Sbjct: 126 N-FKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVTL 184
Query: 207 NFYLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFRYATSLEEFSGGSYNEE 265
NF + N+ LE + PNL S+K+ L+ L A + + GSY +
Sbjct: 185 NFACLE-GETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSYEND 243
Query: 266 PEKYSAVSLPAKLNRL-------GLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDH-C 317
P+ S + L A + + G + + P H
Sbjct: 244 PDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGSHLI 303
Query: 318 TLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLI 377
LIQ C L+ L + IGD+GLEV+A + V++ GL+
Sbjct: 304 KLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRV---FPSDLLGGGNTAVTEEGLV 360
Query: 378 ALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD--REEKITDLPLDDGVR 435
A+S GC +L + + +TNA+L + N N FRL +L+ + + +T PLD+G
Sbjct: 361 AISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFG 420
Query: 436 ALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPS 495
A+++ C + G LTD YIG Y+ + + + + G+TD G+L GC
Sbjct: 421 AIVKAC---KSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKK 477
Query: 496 LQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELI--- 552
++KLEIR F + AL ++ +++R LW+ + SG LA P+ N+E+I
Sbjct: 478 MKKLEIRDS-PFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINEN 536
Query: 553 PSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 590
+ R+ N E ++ + Y ++ G R D P V
Sbjct: 537 DNNRMEENGHEG--RQKVDKLYLYRTVVGTRMDAPPFV 572
>AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 |
chr5:20334420-20336531 REVERSE LENGTH=619
Length = 619
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 182/583 (31%), Positives = 283/583 (48%), Gaps = 27/583 (4%)
Query: 20 TMYSNLTDVVLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRR 79
T ++ + VL+ V+ ++ DR+A S VC+ W+ +++LTR V I CY +P RL +
Sbjct: 49 TFPDHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARLTQ 108
Query: 80 RFPHLESLMLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLE 139
RF + SL+LKGKPR A FNL+P DWG PWV ++Q + L+ + +RM VTD DL
Sbjct: 109 RFKRVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDDLA 168
Query: 140 ALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALN 199
LA S + L L C GF T G+ + + CR L+VL + ES V +++ DW+ +
Sbjct: 169 LLADSFP-GFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEVDWISCFPED 227
Query: 200 NSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFRYATSLEEFS 258
+ LE+L F + A +N K LE + P L +++ ++EL A L
Sbjct: 228 VTCLESLAFDCVE-APINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLLGAPQLTSLG 286
Query: 259 GGSY--NEEPEK-----YSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXXXXXXXXXXX 309
GS+ +EEP+ Y+A K + G + +P +FP
Sbjct: 287 TGSFSHDEEPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNFSYA 346
Query: 310 XXXTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXX 369
+ +I C L+V + + I D GL+ +A I
Sbjct: 347 NISPDMFKPIILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPREDSEGP-- 404
Query: 370 VVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE--EKITD 427
VS+ GL A+S+GC +LE + + +TNA++ + N L FRL ++ R + +T
Sbjct: 405 -VSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTG 463
Query: 428 LPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLL 487
P+D+G A+++ C KL R A+ G LTD Y+G+Y VR + + + G++D L
Sbjct: 464 KPMDEGFGAIVKNCKKLTRLAVS---GLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALR 520
Query: 488 EFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYW 547
+GCP LQKLEIR F + AL R ++R++W+ S +A A P
Sbjct: 521 HVLEGCPRLQKLEIRDS-PFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNL 579
Query: 548 NIELIPSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 590
+E+I S N +++ + Y SL GPR D P V
Sbjct: 580 VVEVIGSDDDDDN------RDYVETLYMYRSLDGPRNDAPKFV 616
>AT4G24390.1 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 174/577 (30%), Positives = 271/577 (46%), Gaps = 23/577 (3%)
Query: 29 VLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLESLM 88
VL+ V+ ++ DR+AVS VCR WY +++ TR V I CY+ +P RL RF + SL+
Sbjct: 58 VLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRSLV 117
Query: 89 LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 148
LKGKPR A FNL+P +WG +PWV ++ + L+ +H +RM VTD DL LA S
Sbjct: 118 LKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP-G 176
Query: 149 LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 208
+ L L C GF T G+ + + CR L+VL + ES V +++ DW+ + LE+L+F
Sbjct: 177 FKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLSF 236
Query: 209 YLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFRYATSLEEFSGGSYN---- 263
+ + +N K LE + P L ++ + EL A L GS++
Sbjct: 237 DCVE-SPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNV 295
Query: 264 ---EEPEKYSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHCT 318
E+ Y+A K + G + +
Sbjct: 296 PQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYANISPHMLKP 355
Query: 319 LIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIA 378
+I C N+ V + + I D GL+ +A I VS GL A
Sbjct: 356 IISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGP---VSGVGLQA 412
Query: 379 LSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE--EKITDLPLDDGVRA 436
+S+GC +LE + + ++TN ++ + N L FRL ++ R + +T P+DDG A
Sbjct: 413 ISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGA 472
Query: 437 LLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSL 496
+++ C KL R A+ G LTD YIG+Y +R + + + G +D L +GCP L
Sbjct: 473 IVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKL 529
Query: 497 QKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRR 556
QKLEIR F + L R ++R++W+ S G ++ A P +E+ +
Sbjct: 530 QKLEIRDS-PFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADG 588
Query: 557 VVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPL 593
+ E+ + ++ + Y SL GPR D P V L
Sbjct: 589 --DDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623
>AT4G24390.2 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 174/577 (30%), Positives = 271/577 (46%), Gaps = 23/577 (3%)
Query: 29 VLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLESLM 88
VL+ V+ ++ DR+AVS VCR WY +++ TR V I CY+ +P RL RF + SL+
Sbjct: 58 VLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRSLV 117
Query: 89 LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 148
LKGKPR A FNL+P +WG +PWV ++ + L+ +H +RM VTD DL LA S
Sbjct: 118 LKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP-G 176
Query: 149 LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 208
+ L L C GF T G+ + + CR L+VL + ES V +++ DW+ + LE+L+F
Sbjct: 177 FKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLSF 236
Query: 209 YLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFRYATSLEEFSGGSYN---- 263
+ + +N K LE + P L ++ + EL A L GS++
Sbjct: 237 DCVE-SPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNV 295
Query: 264 ---EEPEKYSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHCT 318
E+ Y+A K + G + +
Sbjct: 296 PQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYANISPHMLKP 355
Query: 319 LIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIA 378
+I C N+ V + + I D GL+ +A I VS GL A
Sbjct: 356 IISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGP---VSGVGLQA 412
Query: 379 LSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE--EKITDLPLDDGVRA 436
+S+GC +LE + + ++TN ++ + N L FRL ++ R + +T P+DDG A
Sbjct: 413 ISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGA 472
Query: 437 LLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSL 496
+++ C KL R A+ G LTD YIG+Y +R + + + G +D L +GCP L
Sbjct: 473 IVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKL 529
Query: 497 QKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRR 556
QKLEIR F + L R ++R++W+ S G ++ A P +E+ +
Sbjct: 530 QKLEIRDS-PFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADG 588
Query: 557 VVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPL 593
+ E+ + ++ + Y SL GPR D P V L
Sbjct: 589 --DDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 317 CTLIQRCPNLEVLESRNV-IGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRG 375
C+L Q+C +L+ L+ + +GD+GL + + ++ G
Sbjct: 159 CSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRFCEG----------LTDVG 208
Query: 376 LIALSQGCLE-LEYMAVYVS-DITNASLEQIGANLKNLCDFRLVLLDREEKITDLPLDDG 433
+I L GC + L+ + V S IT+ SLE +G++ K L ++ LD E D G
Sbjct: 209 VIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLL---EVLYLDSE-----YIHDKG 260
Query: 434 VRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNV-RWMLLGYVGETDAGLLEFSKG 492
+ A+ +GC +L+ L L+ +TDV +G+ ++ R L + TD G+ KG
Sbjct: 261 LIAVAQGCHRLKN--LKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKG 318
Query: 493 CPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQG 529
L+ L + C+F S L A K L + + G
Sbjct: 319 SKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 27/181 (14%)
Query: 371 VSQRGLIALSQGCLELEYM---AVYVSDITNASLEQIGANLKNLCDFRL---------VL 418
+ +GLIA++QGC L+ + V V+D+ A++ ++ +L+ L + +
Sbjct: 256 IHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAI 315
Query: 419 LDREEKITDLPLDD-------GVRALLRGCDKLRRFALYLRPGGLTDVG---LGYIGQYS 468
+K+ DL L D G+ A+ GC +L R + G ++G + IG+
Sbjct: 316 GKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEI----NGCHNIGTRGIEAIGKSC 371
Query: 469 PNVRWMLLGYVGET-DAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWV 527
P ++ + L Y ++ L E KGC SL+ L + C + A+ A ++L+ L +
Sbjct: 372 PRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHI 431
Query: 528 Q 528
+
Sbjct: 432 R 432
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 431 DDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGE-TDAGLLEF 489
D G+ + GC LR LY R G+TDVG+ I Q ++ + + Y + TD L+
Sbjct: 446 DKGLSYIGMGCSNLRELDLY-RSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVSL 504
Query: 490 SKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRD--LLAMARPYW 547
SK C LQ E RGC + LA A R K L + ++ PS D LLA+A
Sbjct: 505 SK-CSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLK---KCPSINDAGLLALAHFSQ 560
Query: 548 NIELIPSRRVVVNQ 561
N++ I V +
Sbjct: 561 NLKQINVSDTAVTE 574
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 22/220 (10%)
Query: 25 LTDVVLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRR---RF 81
LTD L V+ + KD++ VC+RW L S RK L P LRR RF
Sbjct: 10 LTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKK----LAARAGPHMLRRLASRF 65
Query: 82 PHLESLMLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMI-VTDSDLEA 140
+ L L + + P G + IS+ F L+ L+ +TD+ L +
Sbjct: 66 TQIVELDLSQSISRSFY---P----GVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLAS 118
Query: 141 LARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNN 200
+ R + LQ L + C S GL + C +LR L + + ++ L ++
Sbjct: 119 IGRCLS-LLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDES--LKSLSERC 175
Query: 201 SVLETLNFY-LTDIANVNVKDLELIAKNCPNLVSVKITDC 239
LE L T+I + + DL K C + S+ I C
Sbjct: 176 RDLEALGLQGCTNITDSGLADL---VKGCRKIKSLDINKC 212