Miyakogusa Predicted Gene

Lj1g3v4139550.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4139550.2 Non Chatacterized Hit- tr|I1MZ51|I1MZ51_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.56,0,SUBFAMILY NOT
NAMED,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL; no
description,NULL; Leucine-rich ,CUFF.32002.2
         (516 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr...   677   0.0  
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ...   239   3e-63
AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein...   229   5e-60
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436...   227   1e-59
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986...   218   1e-56
AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20334...   212   6e-55
AT4G24390.1 | Symbols:  | RNI-like superfamily protein | chr4:12...   193   3e-49
AT4G24390.2 | Symbols:  | RNI-like superfamily protein | chr4:12...   193   3e-49
AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    56   5e-08
AT5G01720.1 | Symbols:  | RNI-like superfamily protein | chr5:26...    55   2e-07

>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
           chr2:16672848-16675486 REVERSE LENGTH=592
          Length = 592

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/507 (67%), Positives = 391/507 (77%), Gaps = 6/507 (1%)

Query: 2   LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 61
           LKGKPRAAMFNLIPE+WGG+VTPWV EIS     LKS+HFRRMIV+D DL+ LA++RA  
Sbjct: 80  LKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADD 139

Query: 62  LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 121
           L+ LKL+KCSGF+TDGL  I + CR ++ L MEESS  E DG WLHE+A +N+ LE LNF
Sbjct: 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNF 199

Query: 122 YLTDIANVNVKDLELIAKNCPNLVSVKITDCEILELVNFFRYATSLEEFSGGSYNEE--- 178
           Y+T+ A ++ KDLE IA+NC +LVSVK+ D EILELV FF+ A +LEEF GGS NE+   
Sbjct: 200 YMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGM 259

Query: 179 PEKYSAVSLPAKLNRLGLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHCTLIQRCPN 238
           PEKY  +  P KL RLGL+Y+G NEMPI+FP                TEDHCTLIQ+CPN
Sbjct: 260 PEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPN 319

Query: 239 LEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIALSQGCLE 298
           LEVLE+RNVIGDRGLEVLA          I              +VSQRGLIAL+QGC E
Sbjct: 320 LEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQE 379

Query: 299 LEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDREEKITDLPLDDGVRALLRGCDKLR 358
           LEYMAVYVSDITN SLE IG  LKNLCDFRLVLLDREE+ITDLPLD+GVR+LL GC KLR
Sbjct: 380 LEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLR 439

Query: 359 RFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQKLEIRGCF 418
           RFA YLR GGLTD+GL YIGQYSPNVRWMLLGYVGE+D GL+EFS+GCP+LQKLE+RGC 
Sbjct: 440 RFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGC- 498

Query: 419 FFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRV-VVNQEEP 477
            FSE A+A A T+L SLRYLWVQGY AS +G+DL+ MARPYWNIELIPSRRV  VNQ+  
Sbjct: 499 CFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGE 558

Query: 478 IVQ-EHPAHILAYYSLAGPRTDFPDTV 503
           I + EHPAHILAYYSLAG RTD P TV
Sbjct: 559 IREMEHPAHILAYYSLAGQRTDCPTTV 585


>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
           chr4:1405108-1407057 REVERSE LENGTH=585
          Length = 585

 Score =  239 bits (611), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 167/512 (32%), Positives = 257/512 (50%), Gaps = 22/512 (4%)

Query: 2   LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 61
           LKGKP  A +NL+P+ WGG+  PW++ ++   +SL+ +  +RM+VTD  LE +A S    
Sbjct: 69  LKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEKIAAS-FKD 127

Query: 62  LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 121
            + L L  C GFSTDG+  I + CRNLRVL + E  V +  GDWL     +++ L +L+F
Sbjct: 128 FKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVSLDF 187

Query: 122 YLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFRYATSLEEFSGGSYNEE-- 178
              D + V + DLE +    PNL S+K+     L+ LV+  R A  L E   GS+  +  
Sbjct: 188 SCLD-SEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQLK 246

Query: 179 PEKYS----AVSLPAKLNRL-GLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHCTLI 233
           PE +S    A S   +L  L GL  +    +P ++                   D   L+
Sbjct: 247 PEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYATVRMPDLVELL 306

Query: 234 QRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIALS 293
           +RC  L+ L   ++I D+GLE +A          +               ++++GL+ +S
Sbjct: 307 RRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIP--LTEQGLVFVS 364

Query: 294 QGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD--REEKITDLPLDDGVRALL 351
           +GC +LE +  +    TNA+L  I     NL  FRL +++    +  T+ PLD G +A+ 
Sbjct: 365 KGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIA 424

Query: 352 RGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQK 411
            GC  LRR ++    G L+D    YIG+++  VR + + + G++D  L     GC SL+K
Sbjct: 425 EGCRDLRRLSV---SGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKK 481

Query: 412 LEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRVV 471
           LEIR C  F + AL   A +L+++R LW+     S     LL+   P  N+E+I      
Sbjct: 482 LEIRDC-PFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEHPPE 540

Query: 472 VNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 503
              E   V+     I  Y ++AGPR D P+ V
Sbjct: 541 SRPESSPVE----RIYIYRTVAGPRMDTPEFV 568


>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
           chr3:23273479-23276181 REVERSE LENGTH=594
          Length = 594

 Score =  229 bits (583), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 166/516 (32%), Positives = 250/516 (48%), Gaps = 21/516 (4%)

Query: 2   LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 61
           LKGKP  A FNL+P+ WGG+V PW++ +S  +  L+ +  +RM+VTD  LE +A+S    
Sbjct: 73  LKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKS-FKN 131

Query: 62  LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 121
            + L L  C GFSTDGL  I + CRNL+ L + ES V +  G WL       + L +LN 
Sbjct: 132 FKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNI 191

Query: 122 YLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFRYATSLEEFSGGSYNEE-- 178
                + V+   LE +   CPNL S+K+     LE L    + A  LEE   G Y  E  
Sbjct: 192 SCL-ASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVR 250

Query: 179 PEKYSAVSLP----AKLNRL-GLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHCTLI 233
           P+ YS +S+      +L  L G        +P V+                 + D   L+
Sbjct: 251 PDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLL 310

Query: 234 QRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIALS 293
            +CP L+ L   + I D GLEVLA          +               ++++GL+++S
Sbjct: 311 CQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRV--FPSEPFVMEPNVALTEQGLVSVS 368

Query: 294 QGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE--EKITDLPLDDGVRALL 351
            GC +LE +  +   +TNA+L  I  N  N+  FRL +++ +  + +T  PLD G  A++
Sbjct: 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIV 428

Query: 352 RGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQK 411
             C   +        G LTD    YIG Y+  +  + + + G++D G+     GC SL+K
Sbjct: 429 EHC---KDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRK 485

Query: 412 LEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRVV 471
           LEIR C  F + AL   A++L+++R LW+     S     LL    P  N+E+I  R   
Sbjct: 486 LEIRDC-PFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544

Query: 472 VNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPLD 507
            ++ E    E    +  Y ++AGPR D P  V  +D
Sbjct: 545 DSRPESCPVE---RVFIYRTVAGPRFDMPGFVWNMD 577


>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
           chr1:4368879-4370780 REVERSE LENGTH=577
          Length = 577

 Score =  227 bits (579), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 246/514 (47%), Gaps = 19/514 (3%)

Query: 2   LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 61
           LKGKP  A FNL+P +WGGFV PW++ +++    L+ L  +RM+VTD  L+ L+RS A+ 
Sbjct: 68  LKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLLSRSFAN- 126

Query: 62  LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 121
            + L L  C GF+TDGL  I + CR+LR L ++E+ + ++ G WL+    + + L +LNF
Sbjct: 127 FKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTTLMSLNF 186

Query: 122 YLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFRYATSLEEFSGGSYNEEPE 180
                   NV  LE +    PNL S+K+     L+ L      A  L +   GSY  EP+
Sbjct: 187 ACLK-GETNVAALERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSYENEPD 245

Query: 181 KYSAVSLPAKLNRL-------GLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDH-CTL 232
             S   L   + +        G   +    +P  +P                  +H   L
Sbjct: 246 PESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAAEIQGNHLIKL 305

Query: 233 IQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIAL 292
           IQ C  L+ L   + IGD+GL V+A          +               V++ GL+A+
Sbjct: 306 IQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNAS-VTEVGLVAI 364

Query: 293 SQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD--REEKITDLPLDDGVRAL 350
           S GC +L  +  +   +TNA+L  +  N  N   FRL +L+  + + IT   LD+G  A+
Sbjct: 365 SAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAI 424

Query: 351 LRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQ 410
           ++ C  LRR ++    G LTD    YIG Y+  +  + + + G+TD G+L    GC  ++
Sbjct: 425 VQACKGLRRLSV---SGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMR 481

Query: 411 KLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELI-PSRR 469
           KLEIR    F   AL     R +++R LW+     +  G   LA   P  N+E+I  +  
Sbjct: 482 KLEIRDS-PFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENEN 540

Query: 470 VVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 503
             + Q E   +E    +  Y ++ G R D P  V
Sbjct: 541 NGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574


>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
           chr3:9868342-9870464 FORWARD LENGTH=575
          Length = 575

 Score =  218 bits (554), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/516 (30%), Positives = 246/516 (47%), Gaps = 25/516 (4%)

Query: 2   LKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAHT 61
           LKGKP  A FNL+P +WGGFV PW++ +++    L+ L  +RM+VTD  LE L+RS  + 
Sbjct: 68  LKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLSRSFVN- 126

Query: 62  LQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNF 121
            + L L  C GF+TDGL  I + CR+LR L ++E+ + ++ G WL       + L TLNF
Sbjct: 127 FKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVTLNF 186

Query: 122 YLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFRYATSLEEFSGGSYNEEPE 180
              +    N+  LE +    PNL S+K+     L+ L      A  + +   GSY  +P+
Sbjct: 187 ACLE-GETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSYENDPD 245

Query: 181 KYSAVSLPAKLNRL-------GLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDH-CTL 232
             S + L A + +        G      + +    P                   H   L
Sbjct: 246 SESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGSHLIKL 305

Query: 233 IQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLIAL 292
           IQ C  L+ L   + IGD+GLEV+A          +               V++ GL+A+
Sbjct: 306 IQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNT---AVTEEGLVAI 362

Query: 293 SQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD--REEKITDLPLDDGVRAL 350
           S GC +L  +  +   +TNA+L  +  N  N   FRL +L+  + + +T  PLD+G  A+
Sbjct: 363 SAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAI 422

Query: 351 LRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQ 410
           ++ C   +        G LTD    YIG Y+  +  + + + G+TD G+L    GC  ++
Sbjct: 423 VKAC---KSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMK 479

Query: 411 KLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELI---PS 467
           KLEIR    F + AL    ++ +++R LW+     + SG   LA   P+ N+E+I    +
Sbjct: 480 KLEIRDS-PFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDN 538

Query: 468 RRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 503
            R+  N  E   ++    +  Y ++ G R D P  V
Sbjct: 539 NRMEENGHEG--RQKVDKLYLYRTVVGTRMDAPPFV 572


>AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 |
           chr5:20334420-20336531 REVERSE LENGTH=619
          Length = 619

 Score =  212 bits (539), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 157/515 (30%), Positives = 242/515 (46%), Gaps = 27/515 (5%)

Query: 1   MLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAH 60
           +LKGKPR A FNL+P DWG    PWV  ++Q +  L+ +  +RM VTD DL  LA S   
Sbjct: 117 VLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDDLALLADSFP- 175

Query: 61  TLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLN 120
             + L L  C GF T G+  + + CR L+VL + ES V +++ DW+     + + LE+L 
Sbjct: 176 GFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEVDWISCFPEDVTCLESLA 235

Query: 121 FYLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFRYATSLEEFSGGSY--NE 177
           F   + A +N K LE +    P L  +++     ++EL      A  L     GS+  +E
Sbjct: 236 FDCVE-APINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLLGAPQLTSLGTGSFSHDE 294

Query: 178 EPEK-----YSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHC 230
           EP+      Y+A     K  +   G   +    +P +FP                 +   
Sbjct: 295 EPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNFSYANISPDMFK 354

Query: 231 TLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLI 290
            +I  C  L+V  + + I D GL+ +A          I               VS+ GL 
Sbjct: 355 PIILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPREDSEGP---VSELGLQ 411

Query: 291 ALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE--EKITDLPLDDGVR 348
           A+S+GC +LE +  +   +TNA++  +  N   L  FRL ++ R   + +T  P+D+G  
Sbjct: 412 AISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFG 471

Query: 349 ALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPS 408
           A+++ C KL R A+    G LTD    Y+G+Y   VR + + + G++D  L    +GCP 
Sbjct: 472 AIVKNCKKLTRLAVS---GLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPR 528

Query: 409 LQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSR 468
           LQKLEIR    F + AL     R  ++R++W+     S      +A A P   +E+I S 
Sbjct: 529 LQKLEIRDS-PFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSD 587

Query: 469 RVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 503
               N      +++   +  Y SL GPR D P  V
Sbjct: 588 DDDDN------RDYVETLYMYRSLDGPRNDAPKFV 616


>AT4G24390.1 | Symbols:  | RNI-like superfamily protein |
           chr4:12613909-12615966 REVERSE LENGTH=623
          Length = 623

 Score =  193 bits (490), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 234/518 (45%), Gaps = 23/518 (4%)

Query: 1   MLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAH 60
           +LKGKPR A FNL+P +WG   +PWV   ++ +  L+ +H +RM VTD DL  LA S   
Sbjct: 117 VLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP- 175

Query: 61  TLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLN 120
             + L L  C GF T G+  + + CR L+VL + ES V +++ DW+       + LE+L+
Sbjct: 176 GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLS 235

Query: 121 FYLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFRYATSLEEFSGGSYN--- 176
           F   + + +N K LE +    P L  ++      + EL      A  L     GS++   
Sbjct: 236 FDCVE-SPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDN 294

Query: 177 ----EEPEKYSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHC 230
               E+   Y+A     K  +   G        +  +                       
Sbjct: 295 VPQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYANISPHMLK 354

Query: 231 TLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLI 290
            +I  C N+ V  + + I D GL+ +A          I               VS  GL 
Sbjct: 355 PIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGP---VSGVGLQ 411

Query: 291 ALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE--EKITDLPLDDGVR 348
           A+S+GC +LE +  +  ++TN ++  +  N   L  FRL ++ R   + +T  P+DDG  
Sbjct: 412 AISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFG 471

Query: 349 ALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPS 408
           A+++ C KL R A+    G LTD    YIG+Y   +R + + + G +D  L    +GCP 
Sbjct: 472 AIVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPK 528

Query: 409 LQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSR 468
           LQKLEIR    F +  L     R  ++R++W+     S  G   ++ A P   +E+  + 
Sbjct: 529 LQKLEIRDS-PFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGAD 587

Query: 469 RVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPL 506
               + E+ +  ++   +  Y SL GPR D P  V  L
Sbjct: 588 G--DDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623


>AT4G24390.2 | Symbols:  | RNI-like superfamily protein |
           chr4:12613909-12615966 REVERSE LENGTH=623
          Length = 623

 Score =  193 bits (490), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 234/518 (45%), Gaps = 23/518 (4%)

Query: 1   MLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFNSLKSLHFRRMIVTDSDLEALARSRAH 60
           +LKGKPR A FNL+P +WG   +PWV   ++ +  L+ +H +RM VTD DL  LA S   
Sbjct: 117 VLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP- 175

Query: 61  TLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLN 120
             + L L  C GF T G+  + + CR L+VL + ES V +++ DW+       + LE+L+
Sbjct: 176 GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLS 235

Query: 121 FYLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFRYATSLEEFSGGSYN--- 176
           F   + + +N K LE +    P L  ++      + EL      A  L     GS++   
Sbjct: 236 FDCVE-SPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDN 294

Query: 177 ----EEPEKYSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXXXXXXXXXXXXXXTEDHC 230
               E+   Y+A     K  +   G        +  +                       
Sbjct: 295 VPQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYANISPHMLK 354

Query: 231 TLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRGLI 290
            +I  C N+ V  + + I D GL+ +A          I               VS  GL 
Sbjct: 355 PIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGP---VSGVGLQ 411

Query: 291 ALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE--EKITDLPLDDGVR 348
           A+S+GC +LE +  +  ++TN ++  +  N   L  FRL ++ R   + +T  P+DDG  
Sbjct: 412 AISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFG 471

Query: 349 ALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPS 408
           A+++ C KL R A+    G LTD    YIG+Y   +R + + + G +D  L    +GCP 
Sbjct: 472 AIVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPK 528

Query: 409 LQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSR 468
           LQKLEIR    F +  L     R  ++R++W+     S  G   ++ A P   +E+  + 
Sbjct: 529 LQKLEIRDS-PFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGAD 587

Query: 469 RVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPL 506
               + E+ +  ++   +  Y SL GPR D P  V  L
Sbjct: 588 G--DDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623


>AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr4:8845927-8848701 FORWARD LENGTH=610
          Length = 610

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 24/217 (11%)

Query: 230 CTLIQRCPNLEVLESRNV-IGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRG 288
           C+L Q+C +L+ L+ +   +GD+GL  +           +               ++  G
Sbjct: 159 CSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRFCEG----------LTDVG 208

Query: 289 LIALSQGCLE-LEYMAVYVS-DITNASLEQIGANLKNLCDFRLVLLDREEKITDLPLDDG 346
           +I L  GC + L+ + V  S  IT+ SLE +G++ K L    ++ LD E        D G
Sbjct: 209 VIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLL---EVLYLDSE-----YIHDKG 260

Query: 347 VRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNV-RWMLLGYVGETDAGLLEFSKG 405
           + A+ +GC +L+   L L+   +TDV    +G+   ++ R  L  +   TD G+    KG
Sbjct: 261 LIAVAQGCHRLKN--LKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKG 318

Query: 406 CPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQG 442
              L+ L +  C+F S   L   A   K L  + + G
Sbjct: 319 SKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING 355



 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 27/181 (14%)

Query: 284 VSQRGLIALSQGCLELEYM---AVYVSDITNASLEQIGANLKNLCDFRL---------VL 331
           +  +GLIA++QGC  L+ +    V V+D+  A++ ++  +L+ L  +            +
Sbjct: 256 IHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAI 315

Query: 332 LDREEKITDLPLDD-------GVRALLRGCDKLRRFALYLRPGGLTDVG---LGYIGQYS 381
               +K+ DL L D       G+ A+  GC +L R  +     G  ++G   +  IG+  
Sbjct: 316 GKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEI----NGCHNIGTRGIEAIGKSC 371

Query: 382 PNVRWMLLGYVGET-DAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWV 440
           P ++ + L Y     ++ L E  KGC SL+ L +  C    + A+   A   ++L+ L +
Sbjct: 372 PRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHI 431

Query: 441 Q 441
           +
Sbjct: 432 R 432


>AT5G01720.1 | Symbols:  | RNI-like superfamily protein |
           chr5:267118-270391 REVERSE LENGTH=665
          Length = 665

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 344 DDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGE-TDAGLLEF 402
           D G+  +  GC  LR   LY R  G+TDVG+  I Q   ++  + + Y  + TD  L+  
Sbjct: 446 DKGLSYIGMGCSNLRELDLY-RSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVSL 504

Query: 403 SKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRD--LLAMARPYW 460
           SK C  LQ  E RGC   +   LA  A R K L  + ++     PS  D  LLA+A    
Sbjct: 505 SK-CSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLK---KCPSINDAGLLALAHFSQ 560

Query: 461 NIELIPSRRVVVNQ 474
           N++ I      V +
Sbjct: 561 NLKQINVSDTAVTE 574