Miyakogusa Predicted Gene

Lj1g3v4139550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4139550.1 tr|G7KBX1|G7KBX1_MEDTR Coronatine-insensitive
1-like protein OS=Medicago truncatula GN=MTR_5g081870
,83.86,0,SUBFAMILY NOT NAMED,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; no description,NULL; Leucine-rich ,CUFF.32002.1
         (473 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr...   603   e-173
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ...   196   2e-50
AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein...   181   7e-46
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436...   179   3e-45
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986...   171   1e-42
AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20334...   166   4e-41
AT4G24390.1 | Symbols:  | RNI-like superfamily protein | chr4:12...   147   1e-35
AT4G24390.2 | Symbols:  | RNI-like superfamily protein | chr4:12...   147   1e-35
AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    56   6e-08
AT5G01720.1 | Symbols:  | RNI-like superfamily protein | chr5:26...    54   3e-07

>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
           chr2:16672848-16675486 REVERSE LENGTH=592
          Length = 592

 Score =  603 bits (1556), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 308/465 (66%), Positives = 355/465 (76%), Gaps = 6/465 (1%)

Query: 1   MIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDG 60
           MIV+D DL+ LA++RA  L+ LKL+KCSGF+TDGL  I + CR ++ L MEESS  E DG
Sbjct: 122 MIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDG 181

Query: 61  DWLHEIALNNSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITDCEILELVNFFRY 120
            WLHE+A +N+ LE LNFY+T+ A ++ KDLE IA+NC +LVSVK+ D EILELV FF+ 
Sbjct: 182 KWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKA 241

Query: 121 ATSLEEFSGGSYNEE---PEKYSAVSLPAKLNRLGLTYIGKNEMPIVFPXXXXXXXXXXX 177
           A +LEEF GGS NE+   PEKY  +  P KL RLGL+Y+G NEMPI+FP           
Sbjct: 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLL 301

Query: 178 XXXXXTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXX 237
                TEDHCTLIQ+CPNLEVLE+RNVIGDRGLEVLA          I            
Sbjct: 302 YALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDE 361

Query: 238 XXVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDREEKITD 297
             +VSQRGLIAL+QGC ELEYMAVYVSDITN SLE IG  LKNLCDFRLVLLDREE+ITD
Sbjct: 362 EGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421

Query: 298 LPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLL 357
           LPLD+GVR+LL GC KLRRFA YLR GGLTD+GL YIGQYSPNVRWMLLGYVGE+D GL+
Sbjct: 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481

Query: 358 EFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYW 417
           EFS+GCP+LQKLE+RGC  FSE A+A A T+L SLRYLWVQGY AS +G+DL+ MARPYW
Sbjct: 482 EFSRGCPNLQKLEMRGC-CFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYW 540

Query: 418 NIELIPSRRVV-VNQEEPIVQ-EHPAHILAYYSLAGPRTDFPDTV 460
           NIELIPSRRV  VNQ+  I + EHPAHILAYYSLAG RTD P TV
Sbjct: 541 NIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTV 585


>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
           chr4:1405108-1407057 REVERSE LENGTH=585
          Length = 585

 Score =  196 bits (499), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/470 (31%), Positives = 228/470 (48%), Gaps = 22/470 (4%)

Query: 1   MIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDG 60
           M+VTD  LE +A S     + L L  C GFSTDG+  I + CRNLRVL + E  V +  G
Sbjct: 111 MVVTDECLEKIAAS-FKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGG 169

Query: 61  DWLHEIALNNSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFR 119
           DWL     +++ L +L+F   D + V + DLE +    PNL S+K+     L+ LV+  R
Sbjct: 170 DWLSYFPESSTSLVSLDFSCLD-SEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLR 228

Query: 120 YATSLEEFSGGSYNEE--PEKYS----AVSLPAKLNRL-GLTYIGKNEMPIVFPXXXXXX 172
            A  L E   GS+  +  PE +S    A S   +L  L GL  +    +P ++       
Sbjct: 229 CAPQLTELGTGSFAAQLKPEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLT 288

Query: 173 XXXXXXXXXXTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXX 232
                       D   L++RC  L+ L   ++I D+GLE +A          +       
Sbjct: 289 SLNLSYATVRMPDLVELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDL 348

Query: 233 XXXXXXXVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD-- 290
                   ++++GL+ +S+GC +LE +  +    TNA+L  I     NL  FRL +++  
Sbjct: 349 DATNIP--LTEQGLVFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPF 406

Query: 291 REEKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVG 350
             +  T+ PLD G +A+  GC  LRR ++    G L+D    YIG+++  VR + + + G
Sbjct: 407 APDYKTNEPLDKGFKAIAEGCRDLRRLSVS---GLLSDKAFKYIGKHAKKVRMLSIAFAG 463

Query: 351 ETDAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLL 410
           ++D  L     GC SL+KLEIR C  F + AL   A +L+++R LW+     S     LL
Sbjct: 464 DSDLMLHHLLSGCESLKKLEIRDC-PFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLL 522

Query: 411 AMARPYWNIELIPSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 460
           +   P  N+E+I         E   V+     I  Y ++AGPR D P+ V
Sbjct: 523 SQKMPRLNVEVIDEHPPESRPESSPVE----RIYIYRTVAGPRMDTPEFV 568


>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
           chr3:23273479-23276181 REVERSE LENGTH=594
          Length = 594

 Score =  181 bits (460), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 221/474 (46%), Gaps = 21/474 (4%)

Query: 1   MIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDG 60
           M+VTD  LE +A+S     + L L  C GFSTDGL  I + CRNL+ L + ES V +  G
Sbjct: 115 MVVTDDCLELIAKS-FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSG 173

Query: 61  DWLHEIALNNSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFR 119
            WL       + L +LN      + V+   LE +   CPNL S+K+     LE L    +
Sbjct: 174 HWLSHFPDTYTSLVSLNISCL-ASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQ 232

Query: 120 YATSLEEFSGGSYNEE--PEKYSAVSLP----AKLNRL-GLTYIGKNEMPIVFPXXXXXX 172
            A  LEE   G Y  E  P+ YS +S+      +L  L G        +P V+       
Sbjct: 233 RAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLT 292

Query: 173 XXXXXXXXXXTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXXX 232
                     + D   L+ +CP L+ L   + I D GLEVLA          +       
Sbjct: 293 TLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFV 352

Query: 233 XXXXXXXVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLDRE 292
                   ++++GL+++S GC +LE +  +   +TNA+L  I  N  N+  FRL +++ +
Sbjct: 353 MEPNV--ALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPK 410

Query: 293 --EKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVG 350
             + +T  PLD G  A++  C   +        G LTD    YIG Y+  +  + + + G
Sbjct: 411 APDYLTLEPLDIGFGAIVEHC---KDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAG 467

Query: 351 ETDAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLL 410
           ++D G+     GC SL+KLEIR C  F + AL   A++L+++R LW+     S     LL
Sbjct: 468 DSDLGMHHVLSGCDSLRKLEIRDC-PFGDKALLANASKLETMRSLWMSSCSVSFGACKLL 526

Query: 411 AMARPYWNIELIPSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPLD 464
               P  N+E+I  R    ++ E    E    +  Y ++AGPR D P  V  +D
Sbjct: 527 GQKMPKLNVEVIDERGAPDSRPESCPVE---RVFIYRTVAGPRFDMPGFVWNMD 577


>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
           chr1:4368879-4370780 REVERSE LENGTH=577
          Length = 577

 Score =  179 bits (455), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 217/472 (45%), Gaps = 19/472 (4%)

Query: 1   MIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDG 60
           M+VTD  L+ L+RS A+  + L L  C GF+TDGL  I + CR+LR L ++E+ + ++ G
Sbjct: 110 MVVTDESLDLLSRSFAN-FKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRG 168

Query: 61  DWLHEIALNNSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFR 119
            WL+    + + L +LNF        NV  LE +    PNL S+K+     L+ L     
Sbjct: 169 QWLNCFPDSCTTLMSLNFACLK-GETNVAALERLVARSPNLKSLKLNRAVPLDALARLMS 227

Query: 120 YATSLEEFSGGSYNEEPEKYSAVSLPAKLNRL-------GLTYIGKNEMPIVFPXXXXXX 172
            A  L +   GSY  EP+  S   L   + +        G   +    +P  +P      
Sbjct: 228 CAPQLVDLGVGSYENEPDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLI 287

Query: 173 XXXXXXXXXXTEDH-CTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXX 231
                       +H   LIQ C  L+ L   + IGD+GL V+A          +      
Sbjct: 288 SLNLSYAAEIQGNHLIKLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVH 347

Query: 232 XXXXXXXXVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD- 290
                    V++ GL+A+S GC +L  +  +   +TNA+L  +  N  N   FRL +L+ 
Sbjct: 348 GEEDNNAS-VTEVGLVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEP 406

Query: 291 -REEKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYV 349
            + + IT   LD+G  A+++ C  LRR ++    G LTD    YIG Y+  +  + + + 
Sbjct: 407 HKPDHITFQSLDEGFGAIVQACKGLRRLSV---SGLLTDQVFLYIGMYAEQLEMLSIAFA 463

Query: 350 GETDAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDL 409
           G+TD G+L    GC  ++KLEIR    F   AL     R +++R LW+     +  G   
Sbjct: 464 GDTDKGMLYVLNGCKKMRKLEIRDS-PFGNAALLADVGRYETMRSLWMSSCEVTLGGCKR 522

Query: 410 LAMARPYWNIELI-PSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 460
           LA   P  N+E+I  +    + Q E   +E    +  Y ++ G R D P  V
Sbjct: 523 LAQNSPRLNVEIINENENNGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574


>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
           chr3:9868342-9870464 FORWARD LENGTH=575
          Length = 575

 Score =  171 bits (432), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 217/474 (45%), Gaps = 25/474 (5%)

Query: 1   MIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDG 60
           M+VTD  LE L+RS  +  + L L  C GF+TDGL  I + CR+LR L ++E+ + ++ G
Sbjct: 110 MVVTDESLELLSRSFVN-FKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRG 168

Query: 61  DWLHEIALNNSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITDCEILE-LVNFFR 119
            WL       + L TLNF   +    N+  LE +    PNL S+K+     L+ L     
Sbjct: 169 QWLSCFPDTCTTLVTLNFACLE-GETNLVALERLVARSPNLKSLKLNRAVPLDALARLMA 227

Query: 120 YATSLEEFSGGSYNEEPEKYSAVSLPAKLNRL-------GLTYIGKNEMPIVFPXXXXXX 172
            A  + +   GSY  +P+  S + L A + +        G      + +    P      
Sbjct: 228 CAPQIVDLGVGSYENDPDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLT 287

Query: 173 XXXXXXXXXXTEDH-CTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXXX 231
                        H   LIQ C  L+ L   + IGD+GLEV+A          +      
Sbjct: 288 SLNLSYAAEIHGSHLIKLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLL 347

Query: 232 XXXXXXXXVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD- 290
                    V++ GL+A+S GC +L  +  +   +TNA+L  +  N  N   FRL +L+ 
Sbjct: 348 GGGNT---AVTEEGLVAISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEP 404

Query: 291 -REEKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYV 349
            + + +T  PLD+G  A+++ C   +        G LTD    YIG Y+  +  + + + 
Sbjct: 405 NKPDHVTSQPLDEGFGAIVKAC---KSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFA 461

Query: 350 GETDAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDL 409
           G+TD G+L    GC  ++KLEIR    F + AL    ++ +++R LW+     + SG   
Sbjct: 462 GDTDKGMLYVLNGCKKMKKLEIRDS-PFGDTALLADVSKYETMRSLWMSSCEVTLSGCKR 520

Query: 410 LAMARPYWNIELI---PSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 460
           LA   P+ N+E+I    + R+  N  E   ++    +  Y ++ G R D P  V
Sbjct: 521 LAEKAPWLNVEIINENDNNRMEENGHEG--RQKVDKLYLYRTVVGTRMDAPPFV 572


>AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 |
           chr5:20334420-20336531 REVERSE LENGTH=619
          Length = 619

 Score =  166 bits (419), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 214/472 (45%), Gaps = 27/472 (5%)

Query: 1   MIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDG 60
           M VTD DL  LA S     + L L  C GF T G+  + + CR L+VL + ES V +++ 
Sbjct: 160 MFVTDDDLALLADSFP-GFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEV 218

Query: 61  DWLHEIALNNSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFR 119
           DW+     + + LE+L F   + A +N K LE +    P L  +++     ++EL     
Sbjct: 219 DWISCFPEDVTCLESLAFDCVE-APINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLL 277

Query: 120 YATSLEEFSGGSY--NEEPEK-----YSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXX 170
            A  L     GS+  +EEP+      Y+A     K  +   G   +    +P +FP    
Sbjct: 278 GAPQLTSLGTGSFSHDEEPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCAN 337

Query: 171 XXXXXXXXXXXXTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXX 230
                        +    +I  C  L+V  + + I D GL+ +A          I     
Sbjct: 338 LTSLNFSYANISPDMFKPIILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDP 397

Query: 231 XXXXXXXXXVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD 290
                     VS+ GL A+S+GC +LE +  +   +TNA++  +  N   L  FRL ++ 
Sbjct: 398 REDSEGP---VSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMG 454

Query: 291 RE--EKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGY 348
           R   + +T  P+D+G  A+++ C KL R A+    G LTD    Y+G+Y   VR + + +
Sbjct: 455 RHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVS---GLLTDQAFRYMGEYGKLVRTLSVAF 511

Query: 349 VGETDAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRD 408
            G++D  L    +GCP LQKLEIR    F + AL     R  ++R++W+     S     
Sbjct: 512 AGDSDMALRHVLEGCPRLQKLEIRDS-PFGDVALRSGMHRYYNMRFVWMSACSLSKGCCK 570

Query: 409 LLAMARPYWNIELIPSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTV 460
            +A A P   +E+I S     N      +++   +  Y SL GPR D P  V
Sbjct: 571 DIARAMPNLVVEVIGSDDDDDN------RDYVETLYMYRSLDGPRNDAPKFV 616


>AT4G24390.1 | Symbols:  | RNI-like superfamily protein |
           chr4:12613909-12615966 REVERSE LENGTH=623
          Length = 623

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 205/475 (43%), Gaps = 23/475 (4%)

Query: 1   MIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDG 60
           M VTD DL  LA S     + L L  C GF T G+  + + CR L+VL + ES V +++ 
Sbjct: 160 MFVTDDDLALLAESFP-GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDEL 218

Query: 61  DWLHEIALNNSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFR 119
           DW+       + LE+L+F   + + +N K LE +    P L  ++      + EL     
Sbjct: 219 DWISCFPEGETHLESLSFDCVE-SPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMV 277

Query: 120 YATSLEEFSGGSYN-------EEPEKYSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXX 170
            A  L     GS++       E+   Y+A     K  +   G        +  +      
Sbjct: 278 RAPQLTSLGTGSFSPDNVPQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCAN 337

Query: 171 XXXXXXXXXXXXTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXX 230
                             +I  C N+ V  + + I D GL+ +A          I     
Sbjct: 338 LTSLNFSYANISPHMLKPIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDP 397

Query: 231 XXXXXXXXXVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD 290
                     VS  GL A+S+GC +LE +  +  ++TN ++  +  N   L  FRL ++ 
Sbjct: 398 REDSEGP---VSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMG 454

Query: 291 RE--EKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGY 348
           R   + +T  P+DDG  A+++ C KL R A+    G LTD    YIG+Y   +R + + +
Sbjct: 455 RHRPDHVTGKPMDDGFGAIVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKLIRTLSVAF 511

Query: 349 VGETDAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRD 408
            G +D  L    +GCP LQKLEIR    F +  L     R  ++R++W+     S  G  
Sbjct: 512 AGNSDKALRYVLEGCPKLQKLEIRDS-PFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCR 570

Query: 409 LLAMARPYWNIELIPSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPL 463
            ++ A P   +E+  +     + E+ +  ++   +  Y SL GPR D P  V  L
Sbjct: 571 GVSHALPNVVVEVFGADG--DDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623


>AT4G24390.2 | Symbols:  | RNI-like superfamily protein |
           chr4:12613909-12615966 REVERSE LENGTH=623
          Length = 623

 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 205/475 (43%), Gaps = 23/475 (4%)

Query: 1   MIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIGSFCRNLRVLFMEESSVVENDG 60
           M VTD DL  LA S     + L L  C GF T G+  + + CR L+VL + ES V +++ 
Sbjct: 160 MFVTDDDLALLAESFP-GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDEL 218

Query: 61  DWLHEIALNNSVLETLNFYLTDIANVNVKDLELIAKNCPNLVSVKITD-CEILELVNFFR 119
           DW+       + LE+L+F   + + +N K LE +    P L  ++      + EL     
Sbjct: 219 DWISCFPEGETHLESLSFDCVE-SPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMV 277

Query: 120 YATSLEEFSGGSYN-------EEPEKYSAVSLPAK--LNRLGLTYIGKNEMPIVFPXXXX 170
            A  L     GS++       E+   Y+A     K  +   G        +  +      
Sbjct: 278 RAPQLTSLGTGSFSPDNVPQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCAN 337

Query: 171 XXXXXXXXXXXXTEDHCTLIQRCPNLEVLESRNVIGDRGLEVLAXXXXXXXXXXIXXXXX 230
                             +I  C N+ V  + + I D GL+ +A          I     
Sbjct: 338 LTSLNFSYANISPHMLKPIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDP 397

Query: 231 XXXXXXXXXVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVLLD 290
                     VS  GL A+S+GC +LE +  +  ++TN ++  +  N   L  FRL ++ 
Sbjct: 398 REDSEGP---VSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMG 454

Query: 291 RE--EKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGY 348
           R   + +T  P+DDG  A+++ C KL R A+    G LTD    YIG+Y   +R + + +
Sbjct: 455 RHRPDHVTGKPMDDGFGAIVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKLIRTLSVAF 511

Query: 349 VGETDAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRD 408
            G +D  L    +GCP LQKLEIR    F +  L     R  ++R++W+     S  G  
Sbjct: 512 AGNSDKALRYVLEGCPKLQKLEIRDS-PFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCR 570

Query: 409 LLAMARPYWNIELIPSRRVVVNQEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPL 463
            ++ A P   +E+  +     + E+ +  ++   +  Y SL GPR D P  V  L
Sbjct: 571 GVSHALPNVVVEVFGADG--DDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623


>AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr4:8845927-8848701 FORWARD LENGTH=610
          Length = 610

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 24/217 (11%)

Query: 187 CTLIQRCPNLEVLESRNV-IGDRGLEVLAXXXXXXXXXXIXXXXXXXXXXXXXXVVSQRG 245
           C+L Q+C +L+ L+ +   +GD+GL  +           +               ++  G
Sbjct: 159 CSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRFCEG----------LTDVG 208

Query: 246 LIALSQGCLE-LEYMAVYVS-DITNASLEQIGANLKNLCDFRLVLLDREEKITDLPLDDG 303
           +I L  GC + L+ + V  S  IT+ SLE +G++ K L    ++ LD E        D G
Sbjct: 209 VIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLL---EVLYLDSE-----YIHDKG 260

Query: 304 VRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNV-RWMLLGYVGETDAGLLEFSKG 362
           + A+ +GC +L+   L L+   +TDV    +G+   ++ R  L  +   TD G+    KG
Sbjct: 261 LIAVAQGCHRLKN--LKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKG 318

Query: 363 CPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQG 399
              L+ L +  C+F S   L   A   K L  + + G
Sbjct: 319 SKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEING 355



 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 27/181 (14%)

Query: 241 VSQRGLIALSQGCLELEYM---AVYVSDITNASLEQIGANLKNLCDFRL---------VL 288
           +  +GLIA++QGC  L+ +    V V+D+  A++ ++  +L+ L  +            +
Sbjct: 256 IHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAI 315

Query: 289 LDREEKITDLPLDD-------GVRALLRGCDKLRRFALYLRPGGLTDVG---LGYIGQYS 338
               +K+ DL L D       G+ A+  GC +L R  +     G  ++G   +  IG+  
Sbjct: 316 GKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEI----NGCHNIGTRGIEAIGKSC 371

Query: 339 PNVRWMLLGYVGET-DAGLLEFSKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWV 397
           P ++ + L Y     ++ L E  KGC SL+ L +  C    + A+   A   ++L+ L +
Sbjct: 372 PRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHI 431

Query: 398 Q 398
           +
Sbjct: 432 R 432


>AT5G01720.1 | Symbols:  | RNI-like superfamily protein |
           chr5:267118-270391 REVERSE LENGTH=665
          Length = 665

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 8/125 (6%)

Query: 301 DDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGE-TDAGLLEF 359
           D G+  +  GC  LR   LY R  G+TDVG+  I Q   ++  + + Y  + TD  L+  
Sbjct: 446 DKGLSYIGMGCSNLRELDLY-RSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVSL 504

Query: 360 SKGCPSLQKLEIRGCFFFSEYALAIAATRLKSLRYLWVQGYGASPSGRD--LLAMARPYW 417
           SK C  LQ  E RGC   +   LA  A R K L  + ++     PS  D  LLA+A    
Sbjct: 505 SK-CSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLK---KCPSINDAGLLALAHFSQ 560

Query: 418 NIELI 422
           N++ I
Sbjct: 561 NLKQI 565